Warning: Permanently added '3.85.208.15' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8178322-fedora-41-x86_64 --chroot fedora-41-x86_64 Version: 1.1 PID: 7361 Logging PID: 7362 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8178322, 'buildroot_pkgs': [], 'chroot': 'fedora-41-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'b00aec7339f7862e239df4f0e8039d2edaececb8', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/moose', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'moose', 'package_version': '3.1.5-24', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-41-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/orion', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/orion', 'tags': [], 'task_id': '8178322-fedora-41-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/moose /var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/moose', '/var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose'... Running: git checkout b00aec7339f7862e239df4f0e8039d2edaececb8 -- cmd: ['git', 'checkout', 'b00aec7339f7862e239df4f0e8039d2edaececb8', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose rc: 0 stdout: stderr: Note: switching to 'b00aec7339f7862e239df4f0e8039d2edaececb8'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at b00aec7 automatic import of moose Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading moose-core-3.1.5.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o moose-core-3.1.5.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/moose/moose-core-3.1.5.tar.gz/md5/b5f0b53b46ef45d55caf4cdae3dbd256/moose-core-3.1.5.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 2721k 100 2721k 0 0 111M 0 --:--:-- --:--:-- --:--:-- 115M INFO: Reading stdout from command: md5sum moose-core-3.1.5.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose/moose.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1729905563.495216 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose/moose.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1729905563.495216 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose/moose.spec) Config(fedora-41-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1729905563.495216/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Copy content of container registry.fedoraproject.org/fedora:41 to /var/lib/mock/fedora-41-x86_64-bootstrap-1729905563.495216/root INFO: Checking that registry.fedoraproject.org/fedora:41 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:41 with podman image mount INFO: image registry.fedoraproject.org/fedora:41 as /var/lib/containers/storage/overlay/c9f80638865e4278a17d8f38a8ed41cbe4a03fb0eab2c5c3c7cbf62f6afaaf28/merged INFO: umounting image registry.fedoraproject.org/fedora:41 (/var/lib/containers/storage/overlay/c9f80638865e4278a17d8f38a8ed41cbe4a03fb0eab2c5c3c7cbf62f6afaaf28/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1729905563.495216/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc41.x86_64 dnf5-plugins-5.2.6.2-1.fc41.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 97.7 KiB/s | 31.0 KiB | 00m00s fedora 100% | 47.0 MiB/s | 35.2 MiB | 00m01s Copr repository 100% | 30.7 MiB/s | 3.4 MiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 91.9 MiB/s | 14.3 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.32-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.2 MiB bzip2 x86_64 1.0.8-19.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 95.7 KiB coreutils x86_64 9.5-10.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.7 MiB cpio x86_64 2.15-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB diffutils x86_64 3.10-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB fedora-release-common noarch 42-0.6 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 19.5 KiB findutils x86_64 1:4.10.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB gawk x86_64 5.3.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB glibc-minimal-langpack x86_64 2.40.9000-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B grep x86_64 3.11-9.fc41 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4.2.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap x86_64 2.6.8-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 644.2 KiB openssl-libs x86_64 1:3.2.2-9.fc41 fedora 7.8 MiB p11-kit x86_64 0.25.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB p11-kit-trust x86_64 0.25.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 403.8 KiB package-notes-srpm-macros noarch 0.5-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam x86_64 1.6.1-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB pam-libs x86_64 1.6.1-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 127.7 KiB pcre2 x86_64 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 251.6 KiB perl-srpm-macros noarch 1-56.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf x86_64 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 989.0 B popt x86_64 1.19-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline x86_64 8.2-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 493.1 KiB rpm x86_64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB rpm-build-libs x86_64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 206.7 KiB rpm-libs x86_64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 726.1 KiB rpm-sequoia x86_64 1.7.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB rust-srpm-macros noarch 26.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB systemd-libs x86_64 256.7-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB util-linux-core x86_64 2.40.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.4 KiB xz-libs x86_64 1:5.6.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.4 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip x86_64 3.0-41.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 138.0 KiB zstd x86_64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation, 180 MiB extra will be used (install 180 MiB, remove 0 B). [ 1/154] bzip2-0:1.0.8-19.fc41.x86_64 100% | 2.4 MiB/s | 52.5 KiB | 00m00s [ 2/154] coreutils-0:9.5-10.fc42.x86_6 100% | 47.4 MiB/s | 1.1 MiB | 00m00s [ 3/154] cpio-0:2.15-2.fc41.x86_64 100% | 46.4 MiB/s | 285.2 KiB | 00m00s [ 4/154] diffutils-0:3.10-8.fc41.x86_6 100% | 48.5 MiB/s | 397.2 KiB | 00m00s [ 5/154] fedora-release-common-0:42-0. 100% | 5.7 MiB/s | 23.3 KiB | 00m00s [ 6/154] findutils-1:4.10.0-4.fc41.x86 100% | 87.9 MiB/s | 539.8 KiB | 00m00s [ 7/154] gawk-0:5.3.0-4.fc41.x86_64 100% | 105.9 MiB/s | 1.1 MiB | 00m00s [ 8/154] glibc-minimal-langpack-0:2.40 100% | 24.0 MiB/s | 122.8 KiB | 00m00s [ 9/154] grep-0:3.11-9.fc41.x86_64 100% | 47.2 MiB/s | 289.7 KiB | 00m00s [ 10/154] gzip-0:1.13-2.fc41.x86_64 100% | 26.7 MiB/s | 164.1 KiB | 00m00s [ 11/154] bash-0:5.2.32-2.fc42.x86_64 100% | 34.4 MiB/s | 1.8 MiB | 00m00s [ 12/154] info-0:7.1.1-2.fc42.x86_64 100% | 44.7 MiB/s | 183.2 KiB | 00m00s [ 13/154] patch-0:2.7.6-25.fc41.x86_64 100% | 32.0 MiB/s | 131.0 KiB | 00m00s [ 14/154] redhat-rpm-config-0:296-1.fc4 100% | 18.5 MiB/s | 75.7 KiB | 00m00s [ 15/154] sed-0:4.9-3.fc41.x86_64 100% | 60.4 MiB/s | 309.3 KiB | 00m00s [ 16/154] rpm-build-0:4.20.0-1.fc42.x86 100% | 12.2 MiB/s | 75.2 KiB | 00m00s [ 17/154] unzip-0:6.0-64.fc41.x86_64 100% | 30.1 MiB/s | 184.9 KiB | 00m00s [ 18/154] tar-2:1.35-4.fc41.x86_64 100% | 92.5 MiB/s | 852.1 KiB | 00m00s [ 19/154] shadow-utils-2:4.16.0-6.fc42. 100% | 89.8 MiB/s | 1.3 MiB | 00m00s [ 20/154] which-0:2.21-42.fc41.x86_64 100% | 13.5 MiB/s | 41.6 KiB | 00m00s [ 21/154] xz-1:5.6.3-2.fc42.x86_64 100% | 56.4 MiB/s | 461.7 KiB | 00m00s [ 22/154] util-linux-0:2.40.2-8.fc42.x8 100% | 86.0 MiB/s | 1.1 MiB | 00m00s [ 23/154] fedora-repos-0:42-0.3.noarch 100% | 1.8 MiB/s | 9.2 KiB | 00m00s [ 24/154] coreutils-common-0:9.5-10.fc4 100% | 149.8 MiB/s | 2.1 MiB | 00m00s [ 25/154] glibc-0:2.40.9000-8.fc42.x86_ 100% | 149.4 MiB/s | 2.2 MiB | 00m00s [ 26/154] glibc-common-0:2.40.9000-8.fc 100% | 33.1 MiB/s | 407.2 KiB | 00m00s [ 27/154] rpm-0:4.20.0-1.fc42.x86_64 100% | 39.0 MiB/s | 519.3 KiB | 00m00s [ 28/154] libblkid-0:2.40.2-8.fc42.x86_ 100% | 24.4 MiB/s | 125.0 KiB | 00m00s [ 29/154] libfdisk-0:2.40.2-8.fc42.x86_ 100% | 26.0 MiB/s | 159.6 KiB | 00m00s [ 30/154] libmount-0:2.40.2-8.fc42.x86_ 100% | 30.5 MiB/s | 156.1 KiB | 00m00s [ 31/154] libsmartcols-0:2.40.2-8.fc42. 100% | 16.4 MiB/s | 83.9 KiB | 00m00s [ 32/154] libuuid-0:2.40.2-8.fc42.x86_6 100% | 5.7 MiB/s | 29.0 KiB | 00m00s [ 33/154] xz-libs-1:5.6.3-2.fc42.x86_64 100% | 27.3 MiB/s | 111.9 KiB | 00m00s [ 34/154] util-linux-core-0:2.40.2-8.fc 100% | 72.8 MiB/s | 521.5 KiB | 00m00s [ 35/154] fedora-gpg-keys-0:42-0.3.noar 100% | 24.1 MiB/s | 123.4 KiB | 00m00s [ 36/154] fedora-repos-rawhide-0:42-0.3 100% | 2.9 MiB/s | 8.8 KiB | 00m00s [ 37/154] rpm-build-libs-0:4.20.0-1.fc4 100% | 19.3 MiB/s | 98.7 KiB | 00m00s [ 38/154] rpm-libs-0:4.20.0-1.fc42.x86_ 100% | 43.2 MiB/s | 309.5 KiB | 00m00s [ 39/154] glibc-gconv-extra-0:2.40.9000 100% | 138.8 MiB/s | 1.7 MiB | 00m00s [ 40/154] libxcrypt-0:4.4.36-7.fc41.x86 100% | 28.9 MiB/s | 118.5 KiB | 00m00s [ 41/154] libselinux-0:3.7-6.fc42.x86_6 100% | 14.4 MiB/s | 88.6 KiB | 00m00s [ 42/154] ncurses-libs-0:6.5-2.20240629 100% | 54.4 MiB/s | 334.0 KiB | 00m00s [ 43/154] systemd-libs-0:256.7-1.fc42.x 100% | 89.3 MiB/s | 731.9 KiB | 00m00s [ 44/154] audit-libs-0:4.0.2-1.fc41.x86 100% | 17.6 MiB/s | 126.2 KiB | 00m00s [ 45/154] authselect-libs-0:1.5.0-8.fc4 100% | 50.0 MiB/s | 204.7 KiB | 00m00s [ 46/154] libcap-ng-0:0.8.5-3.fc41.x86_ 100% | 10.6 MiB/s | 32.6 KiB | 00m00s [ 47/154] pam-0:1.6.1-8.fc42.x86_64 100% | 84.4 MiB/s | 518.5 KiB | 00m00s [ 48/154] authselect-0:1.5.0-8.fc42.x86 100% | 34.5 MiB/s | 141.2 KiB | 00m00s [ 49/154] pam-libs-0:1.6.1-8.fc42.x86_6 100% | 18.6 MiB/s | 57.1 KiB | 00m00s [ 50/154] bzip2-libs-0:1.0.8-19.fc41.x8 100% | 10.0 MiB/s | 41.1 KiB | 00m00s [ 51/154] zlib-ng-compat-0:2.1.7-3.fc42 100% | 19.0 MiB/s | 77.9 KiB | 00m00s [ 52/154] readline-0:8.2-11.fc42.x86_64 100% | 41.7 MiB/s | 213.4 KiB | 00m00s [ 53/154] libacl-0:2.3.2-2.fc41.x86_64 100% | 6.0 MiB/s | 24.5 KiB | 00m00s [ 54/154] libcap-0:2.70-4.fc41.x86_64 100% | 21.2 MiB/s | 86.7 KiB | 00m00s [ 55/154] libgcc-0:14.2.1-4.fc42.x86_64 100% | 26.0 MiB/s | 133.3 KiB | 00m00s [ 56/154] libeconf-0:0.7.4-2.fc42.x86_6 100% | 11.3 MiB/s | 34.6 KiB | 00m00s [ 57/154] libattr-0:2.5.2-4.fc41.x86_64 100% | 4.4 MiB/s | 18.2 KiB | 00m00s [ 58/154] libsemanage-0:3.7-3.fc42.x86_ 100% | 22.9 MiB/s | 117.2 KiB | 00m00s [ 59/154] setup-0:2.15.0-5.fc41.noarch 100% | 29.0 MiB/s | 148.3 KiB | 00m00s [ 60/154] libzstd-0:1.5.6-2.fc41.x86_64 100% | 50.5 MiB/s | 310.3 KiB | 00m00s [ 61/154] lua-libs-0:5.4.7-1.fc42.x86_6 100% | 25.8 MiB/s | 132.1 KiB | 00m00s [ 62/154] popt-0:1.19-7.fc41.x86_64 100% | 14.5 MiB/s | 59.3 KiB | 00m00s [ 63/154] sqlite-libs-0:3.46.1-1.fc42.x 100% | 77.5 MiB/s | 714.3 KiB | 00m00s [ 64/154] elfutils-libelf-0:0.192-3.fc4 100% | 29.0 MiB/s | 207.6 KiB | 00m00s [ 65/154] rpm-sequoia-0:1.7.0-2.fc41.x8 100% | 79.2 MiB/s | 892.5 KiB | 00m00s [ 66/154] elfutils-debuginfod-client-0: 100% | 14.1 MiB/s | 43.4 KiB | 00m00s [ 67/154] elfutils-libs-0:0.192-3.fc42. 100% | 51.5 MiB/s | 263.7 KiB | 00m00s [ 68/154] elfutils-0:0.192-3.fc42.x86_6 100% | 75.1 MiB/s | 538.6 KiB | 00m00s [ 69/154] libgomp-0:14.2.1-4.fc42.x86_6 100% | 57.8 MiB/s | 355.3 KiB | 00m00s [ 70/154] file-libs-0:5.45-7.fc41.x86_6 100% | 93.0 MiB/s | 762.0 KiB | 00m00s [ 71/154] jansson-0:2.14-1.fc42.x86_64 100% | 14.7 MiB/s | 45.3 KiB | 00m00s [ 72/154] debugedit-0:5.0-18.fc42.x86_6 100% | 15.6 MiB/s | 80.0 KiB | 00m00s [ 73/154] file-0:5.45-7.fc41.x86_64 100% | 9.6 MiB/s | 49.1 KiB | 00m00s [ 74/154] pkgconf-pkg-config-0:2.3.0-1. 100% | 2.4 MiB/s | 10.0 KiB | 00m00s [ 75/154] libarchive-0:3.7.6-1.fc42.x86 100% | 40.4 MiB/s | 413.7 KiB | 00m00s [ 76/154] pkgconf-0:2.3.0-1.fc42.x86_64 100% | 8.8 MiB/s | 45.2 KiB | 00m00s [ 77/154] pkgconf-m4-0:2.3.0-1.fc42.noa 100% | 3.5 MiB/s | 14.3 KiB | 00m00s [ 78/154] libpkgconf-0:2.3.0-1.fc42.x86 100% | 9.4 MiB/s | 38.5 KiB | 00m00s [ 79/154] binutils-0:2.43.50-5.fc42.x86 100% | 183.7 MiB/s | 6.4 MiB | 00m00s [ 80/154] zstd-0:1.5.6-2.fc41.x86_64 100% | 42.7 MiB/s | 481.5 KiB | 00m00s [ 81/154] curl-0:8.10.1-2.fc42.x86_64 100% | 24.0 MiB/s | 221.3 KiB | 00m00s [ 82/154] ansible-srpm-macros-0:1-16.fc 100% | 5.1 MiB/s | 20.8 KiB | 00m00s [ 83/154] build-reproducibility-srpm-ma 100% | 3.6 MiB/s | 11.2 KiB | 00m00s [ 84/154] dwz-0:0.15-8.fc42.x86_64 100% | 34.0 MiB/s | 139.1 KiB | 00m00s [ 85/154] efi-srpm-macros-0:5-12.fc41.n 100% | 5.5 MiB/s | 22.4 KiB | 00m00s [ 86/154] add-determinism-0:0.4.3-1.fc4 100% | 110.4 MiB/s | 904.4 KiB | 00m00s [ 87/154] forge-srpm-macros-0:0.4.0-1.f 100% | 4.8 MiB/s | 19.8 KiB | 00m00s [ 88/154] fonts-srpm-macros-1:2.0.5-17. 100% | 6.6 MiB/s | 27.0 KiB | 00m00s [ 89/154] fpc-srpm-macros-0:1.3-13.fc41 100% | 2.6 MiB/s | 8.0 KiB | 00m00s [ 90/154] gnat-srpm-macros-0:6-6.fc41.n 100% | 2.9 MiB/s | 9.0 KiB | 00m00s [ 91/154] ghc-srpm-macros-0:1.9.2-1.fc4 100% | 3.0 MiB/s | 9.1 KiB | 00m00s [ 92/154] go-srpm-macros-0:3.6.0-3.fc41 100% | 6.8 MiB/s | 28.0 KiB | 00m00s [ 93/154] kernel-srpm-macros-0:1.0-24.f 100% | 3.2 MiB/s | 9.9 KiB | 00m00s [ 94/154] lua-srpm-macros-0:1-14.fc41.n 100% | 2.9 MiB/s | 8.9 KiB | 00m00s [ 95/154] ocaml-srpm-macros-0:10-3.fc41 100% | 3.0 MiB/s | 9.2 KiB | 00m00s [ 96/154] openblas-srpm-macros-0:2-18.f 100% | 2.5 MiB/s | 7.7 KiB | 00m00s [ 97/154] package-notes-srpm-macros-0:0 100% | 3.2 MiB/s | 9.8 KiB | 00m00s [ 98/154] perl-srpm-macros-0:1-56.fc41. 100% | 2.8 MiB/s | 8.5 KiB | 00m00s [ 99/154] python-srpm-macros-0:3.13-3.f 100% | 7.7 MiB/s | 23.7 KiB | 00m00s [100/154] pyproject-srpm-macros-0:1.15. 100% | 3.3 MiB/s | 13.3 KiB | 00m00s [101/154] qt5-srpm-macros-0:5.15.15-1.f 100% | 2.9 MiB/s | 8.9 KiB | 00m00s [102/154] qt6-srpm-macros-0:6.8.0-1.fc4 100% | 2.9 MiB/s | 9.0 KiB | 00m00s [103/154] zig-srpm-macros-0:1-3.fc41.no 100% | 2.6 MiB/s | 8.1 KiB | 00m00s [104/154] rust-srpm-macros-0:26.3-3.fc4 100% | 2.4 MiB/s | 12.1 KiB | 00m00s [105/154] zip-0:3.0-41.fc41.x86_64 100% | 51.7 MiB/s | 264.8 KiB | 00m00s [106/154] ed-0:1.20.2-2.fc41.x86_64 100% | 26.6 MiB/s | 81.8 KiB | 00m00s [107/154] gdbm-1:1.23-7.fc41.x86_64 100% | 35.9 MiB/s | 147.2 KiB | 00m00s [108/154] libnsl2-0:2.0.1-2.fc41.x86_64 100% | 9.6 MiB/s | 29.6 KiB | 00m00s [109/154] gdbm-libs-1:1.23-7.fc41.x86_6 100% | 13.7 MiB/s | 56.3 KiB | 00m00s [110/154] libpwquality-0:1.4.5-11.fc41. 100% | 35.2 MiB/s | 108.2 KiB | 00m00s [111/154] libtirpc-0:1.3.6-0.fc42.x86_6 100% | 23.1 MiB/s | 94.7 KiB | 00m00s [112/154] ncurses-base-0:6.5-2.20240629 100% | 20.8 MiB/s | 63.8 KiB | 00m00s [113/154] libcom_err-0:1.47.1-6.fc42.x8 100% | 6.5 MiB/s | 26.6 KiB | 00m00s [114/154] krb5-libs-0:1.21.3-2.fc41.x86 100% | 105.1 MiB/s | 753.3 KiB | 00m00s [115/154] openssl-libs-1:3.2.2-9.fc41.x 100% | 144.5 MiB/s | 2.3 MiB | 00m00s [116/154] pcre2-0:10.44-1.fc41.1.x86_64 100% | 47.5 MiB/s | 243.1 KiB | 00m00s [117/154] libsepol-0:3.7-3.fc42.x86_64 100% | 41.8 MiB/s | 342.2 KiB | 00m00s [118/154] cracklib-0:2.9.11-6.fc41.x86_ 100% | 19.9 MiB/s | 81.7 KiB | 00m00s [119/154] libxml2-0:2.12.8-2.fc41.x86_6 100% | 111.9 MiB/s | 687.3 KiB | 00m00s [120/154] lz4-libs-0:1.10.0-1.fc41.x86_ 100% | 13.8 MiB/s | 70.7 KiB | 00m00s [121/154] crypto-policies-0:20241018-1. 100% | 23.7 MiB/s | 72.9 KiB | 00m00s [122/154] libverto-0:0.3.2-9.fc41.x86_6 100% | 6.7 MiB/s | 20.7 KiB | 00m00s [123/154] keyutils-libs-0:1.6.3-4.fc41. 100% | 10.3 MiB/s | 31.6 KiB | 00m00s [124/154] basesystem-0:11-21.fc41.noarc 100% | 3.6 MiB/s | 7.4 KiB | 00m00s [125/154] elfutils-default-yama-scope-0 100% | 4.0 MiB/s | 12.2 KiB | 00m00s [126/154] mpfr-0:4.2.1-5.fc41.x86_64 100% | 48.3 MiB/s | 346.3 KiB | 00m00s [127/154] json-c-0:0.17-4.fc41.x86_64 100% | 10.7 MiB/s | 44.0 KiB | 00m00s [128/154] filesystem-0:3.18-29.fc42.x86 100% | 107.0 MiB/s | 1.1 MiB | 00m00s [129/154] alternatives-0:1.30-1.fc41.x8 100% | 10.4 MiB/s | 42.5 KiB | 00m00s [130/154] libstdc++-0:14.2.1-4.fc42.x86 100% | 123.9 MiB/s | 888.0 KiB | 00m00s [131/154] ca-certificates-0:2024.2.69_v 100% | 115.3 MiB/s | 944.5 KiB | 00m00s [132/154] pcre2-syntax-0:10.44-1.fc41.1 100% | 29.3 MiB/s | 149.9 KiB | 00m00s [133/154] libffi-0:3.4.6-3.fc42.x86_64 100% | 9.8 MiB/s | 40.0 KiB | 00m00s [134/154] libtasn1-0:4.19.0-9.fc41.x86_ 100% | 24.2 MiB/s | 74.2 KiB | 00m00s [135/154] p11-kit-trust-0:0.25.5-4.fc42 100% | 32.5 MiB/s | 133.2 KiB | 00m00s [136/154] p11-kit-0:0.25.5-4.fc42.x86_6 100% | 77.9 MiB/s | 478.3 KiB | 00m00s [137/154] fedora-release-0:42-0.6.noarc 100% | 4.1 MiB/s | 12.5 KiB | 00m00s [138/154] gmp-1:6.3.0-2.fc41.x86_64 100% | 77.6 MiB/s | 318.0 KiB | 00m00s [139/154] fedora-release-identity-basic 100% | 2.6 MiB/s | 13.3 KiB | 00m00s [140/154] libcurl-0:8.10.1-2.fc42.x86_6 100% | 72.5 MiB/s | 371.3 KiB | 00m00s [141/154] libnghttp2-0:1.64.0-1.fc42.x8 100% | 18.9 MiB/s | 77.4 KiB | 00m00s [142/154] libssh-config-0:0.11.1-1.fc42 100% | 3.1 MiB/s | 9.4 KiB | 00m00s [143/154] libssh-0:0.11.1-1.fc42.x86_64 100% | 45.3 MiB/s | 231.9 KiB | 00m00s [144/154] gdb-minimal-0:15.2-1.fc42.x86 100% | 205.5 MiB/s | 4.3 MiB | 00m00s [145/154] xxhash-libs-0:0.8.2-4.fc42.x8 100% | 7.2 MiB/s | 36.8 KiB | 00m00s [146/154] libbrotli-0:1.1.0-5.fc41.x86_ 100% | 41.6 MiB/s | 340.5 KiB | 00m00s [147/154] libidn2-0:2.3.7-2.fc41.x86_64 100% | 22.0 MiB/s | 112.6 KiB | 00m00s [148/154] libpsl-0:0.21.5-4.fc41.x86_64 100% | 12.5 MiB/s | 64.1 KiB | 00m00s [149/154] openldap-0:2.6.8-5.fc41.x86_6 100% | 62.4 MiB/s | 255.6 KiB | 00m00s [150/154] libevent-0:2.1.12-14.fc41.x86 100% | 50.3 MiB/s | 257.5 KiB | 00m00s [151/154] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 110.9 MiB/s | 794.9 KiB | 00m00s [152/154] libtool-ltdl-0:2.4.7-12.fc41. 100% | 8.7 MiB/s | 35.6 KiB | 00m00s [153/154] libunistring-0:1.1-8.fc41.x86 100% | 88.7 MiB/s | 544.8 KiB | 00m00s [154/154] publicsuffix-list-dafsa-0:202 100% | 14.2 MiB/s | 58.3 KiB | 00m00s -------------------------------------------------------------------------------- [154/154] Total 100% | 120.2 MiB/s | 52.8 MiB | 00m00s Running transaction Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/156] Verify package files 100% | 968.0 B/s | 154.0 B | 00m00s [ 2/156] Prepare transaction 100% | 4.4 KiB/s | 154.0 B | 00m00s [ 3/156] Installing libgcc-0:14.2.1-4. 100% | 269.8 MiB/s | 276.3 KiB | 00m00s [ 4/156] Installing publicsuffix-list- 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 5/156] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/156] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s [ 7/156] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/156] Installing fedora-gpg-keys-0: 100% | 56.1 MiB/s | 172.2 KiB | 00m00s [ 9/156] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/156] Installing fedora-release-com 100% | 23.2 MiB/s | 23.8 KiB | 00m00s [ 11/156] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/156] Installing setup-0:2.15.0-5.f 100% | 70.9 MiB/s | 726.1 KiB | 00m00s [ 13/156] Installing filesystem-0:3.18- 100% | 3.8 MiB/s | 212.6 KiB | 00m00s [ 14/156] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/156] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB | 00m00s [ 16/156] Installing ncurses-base-0:6.5 100% | 114.5 MiB/s | 351.7 KiB | 00m00s [ 17/156] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 18/156] Installing ncurses-libs-0:6.5 100% | 239.7 MiB/s | 981.8 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 19/156] Installing glibc-0:2.40.9000- 100% | 264.5 MiB/s | 6.6 MiB | 00m00s [ 20/156] Installing bash-0:5.2.32-2.fc 100% | 453.8 MiB/s | 8.2 MiB | 00m00s [ 21/156] Installing glibc-common-0:2.4 100% | 205.2 MiB/s | 1.0 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 22/156] Installing glibc-gconv-extra- 100% | 248.4 MiB/s | 7.2 MiB | 00m00s [ 23/156] Installing zlib-ng-compat-0:2 100% | 135.5 MiB/s | 138.8 KiB | 00m00s [ 24/156] Installing xz-libs-1:5.6.3-2. 100% | 214.3 MiB/s | 219.5 KiB | 00m00s [ 25/156] 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KiB | 00m00s [ 89/156] Installing cpio-0:2.15-2.fc41 100% | 274.9 MiB/s | 1.1 MiB | 00m00s [ 90/156] Installing diffutils-0:3.10-8 100% | 318.1 MiB/s | 1.6 MiB | 00m00s [ 91/156] Installing libgomp-0:14.2.1-4 100% | 512.9 MiB/s | 525.2 KiB | 00m00s [ 92/156] Installing jansson-0:2.14-1.f 100% | 0.0 B/s | 94.5 KiB | 00m00s [ 93/156] Installing libpkgconf-0:2.3.0 100% | 0.0 B/s | 79.3 KiB | 00m00s [ 94/156] Installing pkgconf-0:2.3.0-1. 100% | 89.0 MiB/s | 91.1 KiB | 00m00s [ 95/156] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 55.8 KiB | 00m00s [ 96/156] Installing libverto-0:0.3.2-9 100% | 0.0 B/s | 31.3 KiB | 00m00s [ 97/156] Installing json-c-0:0.17-4.fc 100% | 0.0 B/s | 83.6 KiB | 00m00s [ 98/156] Installing libnghttp2-0:1.64. 100% | 171.5 MiB/s | 175.6 KiB | 00m00s [ 99/156] Installing xxhash-libs-0:0.8. 100% | 0.0 B/s | 89.8 KiB | 00m00s [100/156] Installing libbrotli-0:1.1.0- 100% | 410.1 MiB/s | 839.9 KiB | 00m00s [101/156] Installing libtool-ltdl-0:2.4 100% | 0.0 B/s | 67.3 KiB | 00m00s [102/156] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [103/156] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [104/156] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [105/156] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [106/156] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [107/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [108/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [109/156] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [110/156] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [111/156] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [112/156] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [113/156] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [114/156] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [115/156] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [116/156] Installing coreutils-common-0 100% | 447.6 MiB/s | 11.2 MiB | 00m00s [117/156] Installing openssl-libs-1:3.2 100% | 460.5 MiB/s | 7.8 MiB | 00m00s [118/156] Installing coreutils-0:9.5-10 100% | 301.4 MiB/s | 5.7 MiB | 00m00s [119/156] Installing ca-certificates-0: 100% | 2.2 MiB/s | 2.4 MiB | 00m01s [120/156] Installing krb5-libs-0:1.21.3 100% | 328.5 MiB/s | 2.3 MiB | 00m00s [121/156] Installing libarchive-0:3.7.6 100% | 304.9 MiB/s | 936.7 KiB | 00m00s [122/156] Installing libtirpc-0:1.3.6-0 100% | 200.0 MiB/s | 204.8 KiB | 00m00s [123/156] Installing gzip-0:1.13-2.fc41 100% | 192.7 MiB/s | 394.6 KiB | 00m00s [124/156] Installing authselect-libs-0: 100% | 204.4 MiB/s | 837.2 KiB | 00m00s [125/156] Installing cracklib-0:2.9.11- 100% | 81.5 MiB/s | 250.3 KiB | 00m00s [126/156] Installing libpwquality-0:1.4 100% | 140.0 MiB/s | 430.1 KiB | 00m00s [127/156] Installing libnsl2-0:2.0.1-2. 100% | 57.7 MiB/s | 59.1 KiB | 00m00s [128/156] Installing pam-0:1.6.1-8.fc42 100% | 167.9 MiB/s | 1.7 MiB | 00m00s [129/156] Installing libssh-0:0.11.1-1. 100% | 279.2 MiB/s | 571.7 KiB | 00m00s [130/156] Installing rpm-sequoia-0:1.7. 100% | 394.5 MiB/s | 2.4 MiB | 00m00s [131/156] Installing rpm-libs-0:4.20.0- 100% | 355.3 MiB/s | 727.7 KiB | 00m00s [132/156] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.5 KiB | 00m00s [133/156] Installing libevent-0:2.1.12- 100% | 292.8 MiB/s | 899.5 KiB | 00m00s [134/156] Installing openldap-0:2.6.8-5 100% | 316.4 MiB/s | 648.0 KiB | 00m00s [135/156] Installing libcurl-0:8.10.1-2 100% | 409.9 MiB/s | 839.5 KiB | 00m00s [136/156] Installing elfutils-debuginfo 100% | 76.4 MiB/s | 78.2 KiB | 00m00s [137/156] Installing elfutils-0:0.192-3 100% | 444.2 MiB/s | 2.7 MiB | 00m00s [138/156] Installing binutils-0:2.43.50 100% | 425.0 MiB/s | 27.6 MiB | 00m00s [139/156] Installing gdb-minimal-0:15.2 100% | 433.2 MiB/s | 13.0 MiB | 00m00s [140/156] Installing debugedit-0:5.0-18 100% | 197.3 MiB/s | 202.0 KiB | 00m00s [141/156] Installing curl-0:8.10.1-2.fc 100% | 49.5 MiB/s | 455.8 KiB | 00m00s [142/156] Installing rpm-0:4.20.0-1.fc4 100% | 192.8 MiB/s | 2.5 MiB | 00m00s [143/156] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [144/156] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [145/156] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [146/156] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [147/156] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [148/156] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.0 KiB | 00m00s [149/156] Installing python-srpm-macros 100% | 0.0 B/s | 52.2 KiB | 00m00s [150/156] Installing redhat-rpm-config- 100% | 94.4 MiB/s | 193.2 KiB | 00m00s [151/156] Installing rpm-build-0:4.20.0 100% | 198.2 MiB/s | 202.9 KiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 195.5 MiB/s | 3.7 MiB | 00m00s [154/156] Installing authselect-0:1.5.0 100% | 79.1 MiB/s | 161.9 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [156/156] Installing info-0:7.1.1-2.fc4 100% | 252.8 KiB/s | 362.2 KiB | 00m01s Warning: skipped PGP checks for 153 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.3-1.fc42.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc42.x86_64 authselect-libs-1.5.0-8.fc42.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.x86_64 binutils-2.43.50-5.fc42.x86_64 build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-2.fc42.noarch coreutils-9.5-10.fc42.x86_64 coreutils-common-9.5-10.fc42.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241018-1.gitce922cb.fc42.noarch curl-8.10.1-2.fc42.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.0-18.fc42.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc42.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.192-3.fc42.x86_64 elfutils-debuginfod-client-0.192-3.fc42.x86_64 elfutils-default-yama-scope-0.192-3.fc42.noarch elfutils-libelf-0.192-3.fc42.x86_64 elfutils-libs-0.192-3.fc42.x86_64 fedora-gpg-keys-42-0.3.noarch fedora-release-42-0.6.noarch fedora-release-common-42-0.6.noarch fedora-release-identity-basic-42-0.6.noarch fedora-repos-42-0.3.noarch fedora-repos-rawhide-42-0.3.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-29.fc42.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.2-1.fc42.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-8.fc42.x86_64 glibc-common-2.40.9000-8.fc42.x86_64 glibc-gconv-extra-2.40.9000-8.fc42.x86_64 glibc-minimal-langpack-2.40.9000-8.fc42.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1.1-2.fc42.x86_64 jansson-2.14-1.fc42.x86_64 json-c-0.17-4.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-2.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.6-1.fc42.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-8.fc42.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-6.fc42.x86_64 libcurl-8.10.1-2.fc42.x86_64 libeconf-0.7.4-2.fc42.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-8.fc42.x86_64 libffi-3.4.6-3.fc42.x86_64 libgcc-14.2.1-4.fc42.x86_64 libgomp-14.2.1-4.fc42.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-8.fc42.x86_64 libnghttp2-1.64.0-1.fc42.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc42.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-6.fc42.x86_64 libsemanage-3.7-3.fc42.x86_64 libsepol-3.7-3.fc42.x86_64 libsmartcols-2.40.2-8.fc42.x86_64 libssh-0.11.1-1.fc42.x86_64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-4.fc42.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.6-0.fc42.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libuuid-2.40.2-8.fc42.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-7.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.7-1.fc42.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-9.fc41.x86_64 p11-kit-0.25.5-4.fc42.x86_64 p11-kit-trust-0.25.5-4.fc42.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-8.fc42.x86_64 pam-libs-1.6.1-8.fc42.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.x86_64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.0-1.fc42.noarch readline-8.2-11.fc42.x86_64 redhat-rpm-config-296-1.fc42.noarch rpm-4.20.0-1.fc42.x86_64 rpm-build-4.20.0-1.fc42.x86_64 rpm-build-libs-4.20.0-1.fc42.x86_64 rpm-libs-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.16.0-6.fc42.x86_64 sqlite-libs-3.46.1-1.fc42.x86_64 systemd-libs-256.7-1.fc42.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-8.fc42.x86_64 util-linux-core-2.40.2-8.fc42.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc42.x86_64 xz-5.6.3-2.fc42.x86_64 xz-libs-5.6.3-2.fc42.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc42.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1729814400 Wrote: /builddir/build/SRPMS/moose-3.1.5-24.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1729905563.495216/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-70i22x2t/moose/moose.spec) Config(child) 0 minutes 20 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/moose-3.1.5-24.fc42.src.rpm) Config(fedora-41-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1729905563.495216/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1729905563.495216/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1729905563.495216/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc41.x86_64 dnf5-plugins-5.2.6.2-1.fc41.x86_64 Finish: chroot init Start: build phase for moose-3.1.5-24.fc42.src.rpm Start: build setup for moose-3.1.5-24.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1729814400 Wrote: /builddir/build/SRPMS/moose-3.1.5-24.fc42.src.rpm Updating and loading repositories: fedora 100% | 124.6 KiB/s | 5.6 KiB | 00m00s updates 100% | 103.1 KiB/s | 27.8 KiB | 00m00s Copr repository 100% | 139.7 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 212.7 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package "tar-2:1.35-4.fc41.x86_64" is already installed. Package Arch Version Repository Size Installing: checksec noarch 2.7.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93.9 KiB cmake x86_64 3.28.3-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31.6 MiB gcc-c++ x86_64 14.2.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.2 MiB git-core x86_64 2.47.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.6 MiB gsl-devel x86_64 2.7.1-11.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB hdf5-devel x86_64 1.12.1-20.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.9 MiB libsbml-devel x86_64 5.20.4-1.fc42 copr_base 36.6 MiB make x86_64 1:4.4.1-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB muParser-devel x86_64 2.3.4-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125.7 KiB ncurses-devel x86_64 6.5-2.20240629.fc41 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Need to download 160 MiB. After this operation, 600 MiB extra will be used (install 600 MiB, remove 0 B). [ 1/146] checksec-0:2.7.1-2.fc41.noarc 100% | 1.2 MiB/s | 30.8 KiB | 00m00s [ 2/146] cmake-0:3.28.3-7.fc41.x86_64 100% | 135.4 MiB/s | 9.7 MiB | 00m00s [ 3/146] gcc-c++-0:14.2.1-4.fc42.x86_6 100% | 149.1 MiB/s | 14.2 MiB | 00m00s [ 4/146] gsl-devel-0:2.7.1-11.fc41.x86 100% | 25.9 MiB/s | 609.6 KiB | 00m00s [ 5/146] hdf5-devel-0:1.12.1-20.fc41.x 100% | 87.3 MiB/s | 1.3 MiB | 00m00s [ 6/146] git-core-0:2.47.0-1.fc42.x86_ 100% | 52.7 MiB/s | 4.9 MiB | 00m00s [ 7/146] make-1:4.4.1-9.fc42.x86_64 100% | 56.6 MiB/s | 579.3 KiB | 00m00s [ 8/146] muParser-devel-0:2.3.4-5.fc41 100% | 4.3 MiB/s | 30.9 KiB | 00m00s [ 9/146] ncurses-devel-0:6.5-2.2024062 100% | 58.9 MiB/s | 543.2 KiB | 00m00s [ 10/146] procps-ng-0:4.0.4-4.fc41.x86_ 100% | 39.0 MiB/s | 359.0 KiB | 00m00s [ 11/146] openssl-1:3.2.2-9.fc41.x86_64 100% | 50.7 MiB/s | 1.1 MiB | 00m00s [ 12/146] python3-devel-0:3.13.0-1.fc42 100% | 49.8 MiB/s | 357.2 KiB | 00m00s [ 13/146] python3-numpy-1:1.26.4-8.fc41 100% | 189.5 MiB/s | 7.4 MiB | 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32.2 MiB/s | 263.7 KiB | 00m00s [ 53/146] rhash-0:1.4.5-1.fc42.x86_64 100% | 24.2 MiB/s | 198.0 KiB | 00m00s [ 54/146] cmake-data-0:3.28.3-7.fc41.no 100% | 79.9 MiB/s | 1.8 MiB | 00m00s [ 55/146] autoconf-0:2.72-3.fc41.noarch 100% | 72.5 MiB/s | 817.0 KiB | 00m00s [ 56/146] perl-Carp-0:1.54-511.fc41.noa 100% | 4.7 MiB/s | 28.9 KiB | 00m00s [ 57/146] perl-Class-Struct-0:0.68-512. 100% | 5.4 MiB/s | 22.0 KiB | 00m00s [ 58/146] perl-Errno-0:1.38-512.fc42.x8 100% | 2.9 MiB/s | 14.9 KiB | 00m00s [ 59/146] perl-interpreter-4:5.40.0-512 100% | 11.8 MiB/s | 72.3 KiB | 00m00s [ 60/146] perl-Exporter-0:5.78-511.fc41 100% | 6.0 MiB/s | 30.9 KiB | 00m00s [ 61/146] perl-File-Basename-0:2.86-512 100% | 3.3 MiB/s | 17.1 KiB | 00m00s [ 62/146] perl-libs-4:5.40.0-512.fc42.x 100% | 131.7 MiB/s | 2.2 MiB | 00m00s [ 63/146] perl-File-Path-0:2.18-511.fc4 100% | 5.7 MiB/s | 35.3 KiB | 00m00s [ 64/146] perl-File-stat-0:1.14-512.fc4 100% | 2.8 MiB/s | 17.0 KiB | 00m00s [ 65/146] perl-Getopt-Long-1:2.58-2.fc4 100% | 15.6 MiB/s | 63.9 KiB | 00m00s [ 66/146] perl-IO-0:1.55-512.fc42.x86_6 100% | 18.9 MiB/s | 77.5 KiB | 00m00s [ 67/146] perl-Thread-Queue-0:3.14-511. 100% | 6.9 MiB/s | 21.3 KiB | 00m00s [ 68/146] perl-constant-0:1.33-512.fc41 100% | 5.6 MiB/s | 23.0 KiB | 00m00s [ 69/146] perl-PathTools-0:3.91-511.fc4 100% | 13.6 MiB/s | 83.4 KiB | 00m00s [ 70/146] perl-threads-1:2.40-511.fc41. 100% | 11.3 MiB/s | 58.0 KiB | 00m00s [ 71/146] emacs-filesystem-1:30.0-3.fc4 100% | 1.2 MiB/s | 7.1 KiB | 00m00s [ 72/146] m4-0:1.4.19-10.fc41.x86_64 100% | 36.5 MiB/s | 298.8 KiB | 00m00s [ 73/146] perl-Data-Dumper-0:2.189-512. 100% | 11.0 MiB/s | 56.3 KiB | 00m00s [ 74/146] perl-File-Compare-0:1.100.800 100% | 2.6 MiB/s | 13.2 KiB | 00m00s [ 75/146] perl-File-Copy-0:2.41-512.fc4 100% | 4.9 MiB/s | 20.1 KiB | 00m00s [ 76/146] perl-File-Find-0:1.44-512.fc4 100% | 6.2 MiB/s | 25.3 KiB | 00m00s [ 77/146] perl-File-Temp-1:0.231.100-51 100% | 14.4 MiB/s | 59.1 KiB | 00m00s [ 78/146] perl-Text-ParseWords-0:3.31-5 100% | 5.4 MiB/s | 16.6 KiB | 00m00s [ 79/146] perl-POSIX-0:2.20-512.fc42.x8 100% | 19.0 MiB/s | 97.0 KiB | 00m00s [ 80/146] minizip-ng-compat-0:4.0.7-1.f 100% | 9.3 MiB/s | 66.5 KiB | 00m00s [ 81/146] flexiblas-0:3.4.4-3.fc41.x86_ 100% | 25.2 MiB/s | 25.8 KiB | 00m00s [ 82/146] flexiblas-openblas-openmp-0:3 100% | 17.3 MiB/s | 17.7 KiB | 00m00s [ 83/146] libxml2-devel-0:2.12.8-2.fc41 100% | 60.4 MiB/s | 495.2 KiB | 00m00s [ 84/146] perl-overload-0:1.37-512.fc42 100% | 7.4 MiB/s | 45.5 KiB | 00m00s [ 85/146] perl-Scalar-List-Utils-5:1.68 100% | 14.5 MiB/s | 74.2 KiB | 00m00s [ 86/146] perl-overloading-0:0.02-512.f 100% | 2.5 MiB/s | 12.9 KiB | 00m00s [ 87/146] perl-mro-0:1.29-512.fc42.x86_ 100% | 4.9 MiB/s | 29.9 KiB | 00m00s [ 88/146] perl-DynaLoader-0:1.56-512.fc 100% | 5.1 MiB/s | 26.0 KiB | 00m00s [ 89/146] perl-threads-shared-0:1.69-51 100% | 8.7 MiB/s | 44.7 KiB | 00m00s [ 90/146] perl-Encode-4:3.21-511.fc41.x 100% | 95.0 MiB/s | 1.0 MiB | 00m00s [ 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MiB | 00m00s [117/146] perl-IPC-Open3-0:1.22-512.fc4 100% | 3.0 MiB/s | 21.8 KiB | 00m00s [118/146] openblas-openmp-0:0.3.26-5.fc 100% | 158.2 MiB/s | 5.1 MiB | 00m00s [119/146] perl-Pod-Simple-1:3.45-511.fc 100% | 20.5 MiB/s | 209.6 KiB | 00m00s [120/146] perl-IO-Socket-SSL-0:2.089-1. 100% | 20.5 MiB/s | 231.2 KiB | 00m00s [121/146] perl-Mozilla-CA-0:20240924-1. 100% | 2.4 MiB/s | 14.5 KiB | 00m00s [122/146] perl-Net-SSLeay-0:1.94-7.fc41 100% | 49.9 MiB/s | 357.6 KiB | 00m00s [123/146] perl-Time-Local-2:1.350-511.f 100% | 11.2 MiB/s | 34.5 KiB | 00m00s [124/146] openblas-0:0.3.26-5.fc41.x86_ 100% | 9.5 MiB/s | 38.7 KiB | 00m00s [125/146] perl-Term-ANSIColor-0:5.01-51 100% | 11.6 MiB/s | 47.7 KiB | 00m00s [126/146] perl-Term-Cap-0:1.18-511.fc41 100% | 7.2 MiB/s | 22.1 KiB | 00m00s [127/146] perl-Pod-Escapes-1:1.07-511.f 100% | 4.8 MiB/s | 19.8 KiB | 00m00s [128/146] ncurses-0:6.5-2.20240629.fc41 100% | 58.5 MiB/s | 419.1 KiB | 00m00s [129/146] perl-Text-Tabs+Wrap-0:2024.00 100% | 5.3 MiB/s | 21.9 KiB | 00m00s [130/146] perl-AutoLoader-0:5.74-512.fc 100% | 4.1 MiB/s | 21.2 KiB | 00m00s [131/146] perl-IO-Socket-IP-0:0.42-512. 100% | 8.2 MiB/s | 41.8 KiB | 00m00s [132/146] perl-URI-0:5.30-1.fc42.noarch 100% | 20.7 MiB/s | 127.2 KiB | 00m00s [133/146] perl-MIME-Base32-0:1.303-21.f 100% | 5.0 MiB/s | 20.5 KiB | 00m00s [134/146] perl-libnet-0:3.15-512.fc41.n 100% | 30.0 MiB/s | 123.0 KiB | 00m00s [135/146] perl-Digest-MD5-0:2.59-5.fc41 100% | 7.0 MiB/s | 36.0 KiB | 00m00s [136/146] perl-FileHandle-0:2.05-512.fc 100% | 3.0 MiB/s | 15.5 KiB | 00m00s [137/146] perl-Digest-0:1.20-511.fc41.n 100% | 4.9 MiB/s | 24.9 KiB | 00m00s [138/146] gcc-plugin-annobin-0:14.2.1-4 100% | 10.8 MiB/s | 55.2 KiB | 00m00s [139/146] pyproject-rpm-macros-0:1.15.1 100% | 10.6 MiB/s | 43.3 KiB | 00m00s [140/146] python-rpm-macros-0:3.13-3.fc 100% | 4.3 MiB/s | 17.7 KiB | 00m00s [141/146] python3-rpm-generators-0:14-1 100% | 9.5 MiB/s | 29.3 KiB | 00m00s [142/146] python3-rpm-macros-0:3.13-3.f 100% | 3.0 MiB/s | 12.4 KiB | 00m00s [143/146] annobin-docs-0:12.70-1.fc42.n 100% | 15.0 MiB/s | 92.0 KiB | 00m00s [144/146] cmake-rpm-macros-0:3.28.3-7.f 100% | 2.5 MiB/s | 17.7 KiB | 00m00s [145/146] annobin-plugin-gcc-0:12.70-1. 100% | 79.1 MiB/s | 971.7 KiB | 00m00s [146/146] python3-packaging-0:24.1-2.fc 100% | 18.9 MiB/s | 116.2 KiB | 00m00s -------------------------------------------------------------------------------- [146/146] Total 100% | 162.5 MiB/s | 160.1 MiB | 00m01s Running transaction [ 1/148] Verify package files 100% | 331.0 B/s | 146.0 B | 00m00s [ 2/148] Prepare transaction 100% | 2.0 KiB/s | 146.0 B | 00m00s [ 3/148] Installing cmake-filesystem-0 100% | 7.0 MiB/s | 7.1 KiB | 00m00s [ 4/148] Installing libmpc-0:1.3.1-6.f 100% | 162.3 MiB/s | 166.2 KiB | 00m00s [ 5/148] Installing libgfortran-0:14.2 100% | 435.5 MiB/s | 3.0 MiB | 00m00s [ 6/148] Installing python-rpm-macros- 100% | 0.0 B/s | 22.8 KiB | 00m00s [ 7/148] Installing expat-0:2.6.3-1.fc 100% | 286.7 MiB/s | 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| 7.3 MiB | 00m00s [137/148] Installing readline-devel-0:8 100% | 273.7 MiB/s | 560.5 KiB | 00m00s [138/148] Installing muParser-devel-0:2 100% | 125.5 MiB/s | 128.6 KiB | 00m00s [139/148] Installing gsl-devel-0:2.7.1- 100% | 275.4 MiB/s | 1.7 MiB | 00m00s [140/148] Installing git-core-0:2.47.0- 100% | 503.2 MiB/s | 22.6 MiB | 00m00s [141/148] Installing hdf5-devel-0:1.12. 100% | 389.4 MiB/s | 3.9 MiB | 00m00s [142/148] Installing gcc-plugin-annobin 100% | 5.1 MiB/s | 62.6 KiB | 00m00s [143/148] Installing annobin-plugin-gcc 100% | 68.9 MiB/s | 987.3 KiB | 00m00s [144/148] Installing libsbml-devel-0:5. 100% | 563.8 MiB/s | 36.6 MiB | 00m00s [145/148] Installing rsync-0:3.3.0-4.fc 100% | 254.5 MiB/s | 781.9 KiB | 00m00s [146/148] Installing procps-ng-0:4.0.4- 100% | 208.2 MiB/s | 1.0 MiB | 00m00s [147/148] Installing openssl-1:3.2.2-9. 100% | 246.7 MiB/s | 1.7 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [148/148] Installing checksec-0:2.7.1-2 100% | 549.3 KiB/s | 95.0 KiB | 00m00s Warning: skipped PGP checks for 145 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: build setup for moose-3.1.5-24.fc42.src.rpm Start: rpmbuild moose-3.1.5-24.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1729814400 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.oi14iP + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + test -d /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/rm -rf /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.NJpPCJ + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd /builddir/build/BUILD/moose-3.1.5-build + rm -rf moose-core-3.1.5 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/moose-core-3.1.5.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd moose-core-3.1.5 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + GIT_COMMITTER_DATE=@1729814400 + GIT_AUTHOR_DATE=@1729814400 + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'moose-3.1.5 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/c570f7c057f9c0ca7360c82a8932bcb0df222da9.patch + /usr/bin/git apply --index --reject - Checking patch pymoose/PyRun.cpp... Applied patch pymoose/PyRun.cpp cleanly. + GIT_COMMITTER_DATE=@1729814400 + GIT_AUTHOR_DATE=@1729814400 + /usr/bin/git commit -q -m c570f7c057f9c0ca7360c82a8932bcb0df222da9.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/665c532745987fb1c7a8fc2a9a57bffa330480b4.patch + /usr/bin/git apply --index --reject - Checking patch pymoose/PyRun.cpp... Applied patch pymoose/PyRun.cpp cleanly. + GIT_COMMITTER_DATE=@1729814400 + GIT_AUTHOR_DATE=@1729814400 + /usr/bin/git commit -q -m 665c532745987fb1c7a8fc2a9a57bffa330480b4.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-Use-.so-suffix-for-all-arches.patch + /usr/bin/git apply --index --reject - Checking patch python/setup.cmake.py... Applied patch python/setup.cmake.py cleanly. + GIT_COMMITTER_DATE=@1729814400 + GIT_AUTHOR_DATE=@1729814400 + /usr/bin/git commit -q -m 0001-Use-.so-suffix-for-all-arches.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/moose-python3.10.patch + /usr/bin/git apply --index --reject - Checking patch python/moose/utils.py... Hunk #2 succeeded at 203 (offset -1 lines). Applied patch python/moose/utils.py cleanly. + GIT_COMMITTER_DATE=@1729814400 + GIT_AUTHOR_DATE=@1729814400 + /usr/bin/git commit -q -m moose-python3.10.patch --author 'rpm-build ' + sed -i s/-O3// CMakeLists.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.mIsrRf + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + cmake_opts=(-DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_C_FLAGS="-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer" -DCMAKE_CXX_FLAGS="-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer" -DCMAKE_EXE_LINKER_FLAGS="$LDFLAGS -Wl,--build-id" -DCMAKE_MODULE_LINKER_FLAGS="$LDFLAGS -Wl,--build-id" -DVERSION_MOOSE=3.1.5 -DCMAKE_BUILD_TYPE="Release|RelWithDebugInfo" -DCMAKE_INSTALL_DO_STRIP=0 -DPYTHON_EXECUTABLE=/usr/bin/python3) + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=ON '-DCMAKE_C_FLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' '-DCMAKE_CXX_FLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id' '-DCMAKE_MODULE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id' -DVERSION_MOOSE=3.1.5 '-DCMAKE_BUILD_TYPE=Release|RelWithDebugInfo' -DCMAKE_INSTALL_DO_STRIP=0 -DPYTHON_EXECUTABLE=/usr/bin/python3 CMake Deprecation Warning at CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 14.2.1 -- The CXX compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Performing Test COMPILER_SUPPORTS_CXX0X -- Performing Test COMPILER_SUPPORTS_CXX0X - Success -- Performing Test COMPILER_WARNS_STRICT_ALIASING -- Performing Test COMPILER_WARNS_STRICT_ALIASING - Success -- Performing Test COMPILER_SUPPORT_UNUSED_BUT_SET_VARIABLE_NO_WARN -- Performing Test COMPILER_SUPPORT_UNUSED_BUT_SET_VARIABLE_NO_WARN - Success -- Your compiler supports c++11 features. Enabling it -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- MOOSE Version 3.1.5 -- | Writing 3.1.5 to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python/VERSION -- Operating system: Linux -- Building for Release/No unit tests. -- GSL version : 2.7 -- Found GSL /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so -- Found HDF5: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so (found version "1.12.1") found components: CXX HL -- MOOSE will use following HDF5 /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libhdf5_hl_cpp.so;/usr/lib64/libhdf5_hl.so -- Using gsl libraries: /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so CMake Deprecation Warning at external/muparser/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at basecode/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at signeur/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at ksolve/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at hsolve/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at diffusion/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at synapse/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at intfire/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Shared libs: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libhdf5_hl_cpp.so;/usr/lib64/libhdf5_hl.so;/usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so CMake Warning (dev) at CMakeLists.txt:381 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13", minimum required is "3.4") -- Python include paths: -I/usr/include/python3.13 -I/usr/include/python3.13 -- NumPy include path: /usr/lib64/python3.13/site-packages/numpy/core/include -- Platform: Linux-6.5.6-300.fc39.x86_64-x86_64-with-glibc2.40.9000 CMake Warning (dev) at CMakeLists.txt:411 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found version "3.13") -- binary distribution file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz ======================================= If cmake did not report any error, run 'make' to build MOOSE ======================================= -- Configuring done (1.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -B/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f intfire/CMakeFiles/intfire.dir/build.make intfire/CMakeFiles/intfire.dir/depend /usr/bin/gmake -f external/muparser/CMakeFiles/muparser.dir/build.make external/muparser/CMakeFiles/muparser.dir/depend /usr/bin/gmake -f basecode/CMakeFiles/basecode.dir/build.make basecode/CMakeFiles/basecode.dir/depend /usr/bin/gmake -f msg/CMakeFiles/msg.dir/build.make msg/CMakeFiles/msg.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire/CMakeFiles/intfire.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser/CMakeFiles/muparser.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode/CMakeFiles/basecode.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg/CMakeFiles/msg.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f external/muparser/CMakeFiles/muparser.dir/build.make external/muparser/CMakeFiles/muparser.dir/build /usr/bin/gmake -f intfire/CMakeFiles/intfire.dir/build.make intfire/CMakeFiles/intfire.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f basecode/CMakeFiles/basecode.dir/build.make basecode/CMakeFiles/basecode.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f msg/CMakeFiles/msg.dir/build.make msg/CMakeFiles/msg.dir/build [ 1%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParser.cpp.o gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParser.cpp.o -MF CMakeFiles/muparser.dir/src/muParser.cpp.o.d -o CMakeFiles/muparser.dir/src/muParser.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParser.cpp [ 1%] Building CXX object intfire/CMakeFiles/intfire.dir/AdExIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/AdExIF.cpp.o -MF CMakeFiles/intfire.dir/AdExIF.cpp.o.d -o CMakeFiles/intfire.dir/AdExIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/AdExIF.cpp [ 1%] Building CXX object basecode/CMakeFiles/basecode.dir/consts.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/consts.cpp.o -MF CMakeFiles/basecode.dir/consts.cpp.o.d -o CMakeFiles/basecode.dir/consts.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/consts.cpp [ 1%] Building CXX object msg/CMakeFiles/msg.dir/Msg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/Msg.cpp.o -MF CMakeFiles/msg.dir/Msg.cpp.o.d -o CMakeFiles/msg.dir/Msg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/Msg.cpp [ 1%] Building CXX object basecode/CMakeFiles/basecode.dir/Element.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Element.cpp.o -MF CMakeFiles/basecode.dir/Element.cpp.o.d -o CMakeFiles/basecode.dir/Element.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Element.cpp [ 1%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserBase.cpp.o -MF CMakeFiles/muparser.dir/src/muParserBase.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserBase.cpp [ 2%] Building CXX object intfire/CMakeFiles/intfire.dir/AdThreshIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/AdThreshIF.cpp.o -MF CMakeFiles/intfire.dir/AdThreshIF.cpp.o.d -o CMakeFiles/intfire.dir/AdThreshIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/AdThreshIF.cpp [ 3%] Building CXX object msg/CMakeFiles/msg.dir/DiagonalMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/DiagonalMsg.cpp.o -MF CMakeFiles/msg.dir/DiagonalMsg.cpp.o.d -o CMakeFiles/msg.dir/DiagonalMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/DiagonalMsg.cpp [ 3%] Building CXX object intfire/CMakeFiles/intfire.dir/ExIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/ExIF.cpp.o -MF CMakeFiles/intfire.dir/ExIF.cpp.o.d -o CMakeFiles/intfire.dir/ExIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/ExIF.cpp [ 4%] Building CXX object basecode/CMakeFiles/basecode.dir/DataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/DataElement.cpp.o -MF CMakeFiles/basecode.dir/DataElement.cpp.o.d -o CMakeFiles/basecode.dir/DataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/DataElement.cpp [ 4%] Building CXX object basecode/CMakeFiles/basecode.dir/GlobalDataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/GlobalDataElement.cpp.o -MF CMakeFiles/basecode.dir/GlobalDataElement.cpp.o.d -o CMakeFiles/basecode.dir/GlobalDataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/GlobalDataElement.cpp [ 5%] Building CXX object basecode/CMakeFiles/basecode.dir/LocalDataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/LocalDataElement.cpp.o -MF CMakeFiles/basecode.dir/LocalDataElement.cpp.o.d -o CMakeFiles/basecode.dir/LocalDataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/LocalDataElement.cpp [ 5%] Building CXX object msg/CMakeFiles/msg.dir/OneToAllMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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CMakeFiles/msg.dir/OneToAllMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/OneToAllMsg.cpp [ 6%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o -MF CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserBytecode.cpp [ 6%] Building CXX object basecode/CMakeFiles/basecode.dir/Eref.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Eref.cpp.o -MF CMakeFiles/basecode.dir/Eref.cpp.o.d -o CMakeFiles/basecode.dir/Eref.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Eref.cpp [ 7%] Building CXX object intfire/CMakeFiles/intfire.dir/IntFireBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/IntFireBase.cpp.o -MF CMakeFiles/intfire.dir/IntFireBase.cpp.o.d -o CMakeFiles/intfire.dir/IntFireBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/IntFireBase.cpp [ 7%] Building CXX object basecode/CMakeFiles/basecode.dir/Finfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Finfo.cpp.o -MF CMakeFiles/basecode.dir/Finfo.cpp.o.d -o CMakeFiles/basecode.dir/Finfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Finfo.cpp [ 7%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserCallback.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserCallback.cpp.o -MF CMakeFiles/muparser.dir/src/muParserCallback.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserCallback.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserCallback.cpp [ 7%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserDLL.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserDLL.cpp.o -MF CMakeFiles/muparser.dir/src/muParserDLL.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserDLL.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserDLL.cpp [ 8%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserError.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserError.cpp.o -MF CMakeFiles/muparser.dir/src/muParserError.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserError.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserError.cpp [ 9%] Building CXX object msg/CMakeFiles/msg.dir/OneToOneMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/OneToOneMsg.cpp.o -MF CMakeFiles/msg.dir/OneToOneMsg.cpp.o.d -o CMakeFiles/msg.dir/OneToOneMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/OneToOneMsg.cpp [ 9%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserInt.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserInt.cpp.o -MF CMakeFiles/muparser.dir/src/muParserInt.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserInt.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserInt.cpp [ 9%] Building CXX object msg/CMakeFiles/msg.dir/SingleMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/SingleMsg.cpp.o -MF CMakeFiles/msg.dir/SingleMsg.cpp.o.d -o CMakeFiles/msg.dir/SingleMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SingleMsg.cpp [ 9%] Building CXX object intfire/CMakeFiles/intfire.dir/IzhIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/IzhIF.cpp.o -MF CMakeFiles/intfire.dir/IzhIF.cpp.o.d -o CMakeFiles/intfire.dir/IzhIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/IzhIF.cpp [ 10%] Building CXX object basecode/CMakeFiles/basecode.dir/DestFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/DestFinfo.cpp.o -MF CMakeFiles/basecode.dir/DestFinfo.cpp.o.d -o CMakeFiles/basecode.dir/DestFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/DestFinfo.cpp [ 11%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserTest.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserTest.cpp.o -MF CMakeFiles/muparser.dir/src/muParserTest.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserTest.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserTest.cpp [ 11%] Building CXX object basecode/CMakeFiles/basecode.dir/Cinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Cinfo.cpp.o -MF CMakeFiles/basecode.dir/Cinfo.cpp.o.d -o CMakeFiles/basecode.dir/Cinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Cinfo.cpp [ 11%] Building CXX object msg/CMakeFiles/msg.dir/SparseMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/SparseMsg.cpp.o -MF CMakeFiles/msg.dir/SparseMsg.cpp.o.d -o CMakeFiles/msg.dir/SparseMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp [ 11%] Building CXX object intfire/CMakeFiles/intfire.dir/LIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/LIF.cpp.o -MF CMakeFiles/intfire.dir/LIF.cpp.o.d -o CMakeFiles/intfire.dir/LIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/LIF.cpp [ 12%] Building CXX object intfire/CMakeFiles/intfire.dir/QIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/QIF.cpp.o -MF CMakeFiles/intfire.dir/QIF.cpp.o.d -o CMakeFiles/intfire.dir/QIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/QIF.cpp [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/SrcFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SrcFinfo.cpp.o -MF CMakeFiles/basecode.dir/SrcFinfo.cpp.o.d -o CMakeFiles/basecode.dir/SrcFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SrcFinfo.cpp [ 13%] Building CXX object intfire/CMakeFiles/intfire.dir/testIntFire.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/testIntFire.cpp.o -MF CMakeFiles/intfire.dir/testIntFire.cpp.o.d -o CMakeFiles/intfire.dir/testIntFire.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/testIntFire.cpp [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/ValueFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/ValueFinfo.cpp.o -MF CMakeFiles/basecode.dir/ValueFinfo.cpp.o.d -o CMakeFiles/basecode.dir/ValueFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/ValueFinfo.cpp [ 13%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o -MF CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserTokenReader.cpp [ 13%] Linking CXX static library libintfire.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/cmake -P CMakeFiles/intfire.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/cmake -E cmake_link_script CMakeFiles/intfire.dir/link.txt --verbose=1 /usr/bin/ar qc libintfire.a CMakeFiles/intfire.dir/AdExIF.cpp.o CMakeFiles/intfire.dir/AdThreshIF.cpp.o CMakeFiles/intfire.dir/ExIF.cpp.o CMakeFiles/intfire.dir/IntFireBase.cpp.o CMakeFiles/intfire.dir/IzhIF.cpp.o CMakeFiles/intfire.dir/LIF.cpp.o CMakeFiles/intfire.dir/QIF.cpp.o CMakeFiles/intfire.dir/testIntFire.cpp.o /usr/bin/ranlib libintfire.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 13%] Built target intfire /usr/bin/gmake -f shell/CMakeFiles/shell.dir/build.make shell/CMakeFiles/shell.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell/CMakeFiles/shell.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f shell/CMakeFiles/shell.dir/build.make shell/CMakeFiles/shell.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 13%] Building CXX object shell/CMakeFiles/shell.dir/Shell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/Shell.cpp.o -MF CMakeFiles/shell.dir/Shell.cpp.o.d -o CMakeFiles/shell.dir/Shell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/Shell.cpp [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/SharedFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SharedFinfo.cpp.o -MF CMakeFiles/basecode.dir/SharedFinfo.cpp.o.d -o CMakeFiles/basecode.dir/SharedFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SharedFinfo.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp: In function ‘fillErefsFromMatrix(SparseMatrix const&, std::vector >, std::allocator > > >&, Element*, Element*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:444:67: warning: ‘entry’ may be used uninitialized [-Wmaybe-uninitialized] 444 | v[i][j] = Eref( e2, colIndex[j], entry[j] ); | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:439:37: note: ‘entry’ was declared here 439 | const unsigned int* entry; | ^~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:444:67: warning: ‘colIndex’ may be used uninitialized [-Wmaybe-uninitialized] 444 | v[i][j] = Eref( e2, colIndex[j], entry[j] ); | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:440:37: note: ‘colIndex’ was declared here 440 | const unsigned int* colIndex; | ^~~~~~~~ [ 14%] Building CXX object basecode/CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER 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CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o.d -o CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/FieldElementFinfo.cpp [ 14%] Linking CXX static library libmuparser.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/cmake -P CMakeFiles/muparser.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/cmake -E cmake_link_script CMakeFiles/muparser.dir/link.txt --verbose=1 /usr/bin/ar qc libmuparser.a CMakeFiles/muparser.dir/src/muParser.cpp.o CMakeFiles/muparser.dir/src/muParserBase.cpp.o CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o CMakeFiles/muparser.dir/src/muParserCallback.cpp.o CMakeFiles/muparser.dir/src/muParserDLL.cpp.o CMakeFiles/muparser.dir/src/muParserError.cpp.o CMakeFiles/muparser.dir/src/muParserInt.cpp.o CMakeFiles/muparser.dir/src/muParserTest.cpp.o CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o [ 14%] Building CXX object basecode/CMakeFiles/basecode.dir/FieldElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables 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-march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/BinomialRng.cpp.o -MF CMakeFiles/randnum.dir/BinomialRng.cpp.o.d -o CMakeFiles/randnum.dir/BinomialRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/BinomialRng.cpp [ 15%] Building CXX object basecode/CMakeFiles/basecode.dir/Id.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Id.cpp.o -MF CMakeFiles/basecode.dir/Id.cpp.o.d -o CMakeFiles/basecode.dir/Id.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Id.cpp [ 16%] Building CXX object msg/CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o -MF CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o.d -o CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/OneToOneDataIndexMsg.cpp [ 17%] Building CXX object basecode/CMakeFiles/basecode.dir/ObjId.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/ObjId.cpp.o -MF CMakeFiles/basecode.dir/ObjId.cpp.o.d -o CMakeFiles/basecode.dir/ObjId.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/ObjId.cpp [ 17%] Building CXX object basecode/CMakeFiles/basecode.dir/global.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/global.cpp.o -MF CMakeFiles/basecode.dir/global.cpp.o.d -o CMakeFiles/basecode.dir/global.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp [ 17%] Building CXX object msg/CMakeFiles/msg.dir/testMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/testMsg.cpp.o -MF CMakeFiles/msg.dir/testMsg.cpp.o.d -o CMakeFiles/msg.dir/testMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/testMsg.cpp [ 18%] Building CXX object randnum/CMakeFiles/randnum.dir/Exponential.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Exponential.cpp.o -MF CMakeFiles/randnum.dir/Exponential.cpp.o.d -o CMakeFiles/randnum.dir/Exponential.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Exponential.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp: In function ‘bool moose::createParentDirs(const std::string&)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp:155:15: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | system( command.c_str() ); | ~~~~~~^~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object randnum/CMakeFiles/randnum.dir/ExponentialRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/ExponentialRng.cpp.o -MF CMakeFiles/randnum.dir/ExponentialRng.cpp.o.d -o CMakeFiles/randnum.dir/ExponentialRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/ExponentialRng.cpp [ 19%] Building CXX object basecode/CMakeFiles/basecode.dir/SetGet.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SetGet.cpp.o -MF CMakeFiles/basecode.dir/SetGet.cpp.o.d -o CMakeFiles/basecode.dir/SetGet.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SetGet.cpp [ 19%] Building CXX object basecode/CMakeFiles/basecode.dir/OpFuncBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/OpFuncBase.cpp.o -MF CMakeFiles/basecode.dir/OpFuncBase.cpp.o.d -o CMakeFiles/basecode.dir/OpFuncBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/OpFuncBase.cpp [ 19%] Building CXX object basecode/CMakeFiles/basecode.dir/EpFunc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/EpFunc.cpp.o -MF CMakeFiles/basecode.dir/EpFunc.cpp.o.d -o CMakeFiles/basecode.dir/EpFunc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/EpFunc.cpp [ 20%] Building CXX object shell/CMakeFiles/shell.dir/ShellCopy.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/ShellCopy.cpp.o -MF CMakeFiles/shell.dir/ShellCopy.cpp.o.d -o CMakeFiles/shell.dir/ShellCopy.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/ShellCopy.cpp [ 21%] Building CXX object basecode/CMakeFiles/basecode.dir/HopFunc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/HopFunc.cpp.o -MF CMakeFiles/basecode.dir/HopFunc.cpp.o.d -o CMakeFiles/basecode.dir/HopFunc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/HopFunc.cpp [ 21%] Building CXX object randnum/CMakeFiles/randnum.dir/Gamma.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Gamma.cpp.o -MF CMakeFiles/randnum.dir/Gamma.cpp.o.d -o CMakeFiles/randnum.dir/Gamma.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Gamma.cpp [ 21%] Building CXX object basecode/CMakeFiles/basecode.dir/SparseMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SparseMatrix.cpp.o -MF CMakeFiles/basecode.dir/SparseMatrix.cpp.o.d -o CMakeFiles/basecode.dir/SparseMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SparseMatrix.cpp [ 21%] Linking CXX static library libmsg.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/cmake -P CMakeFiles/msg.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/cmake -E cmake_link_script CMakeFiles/msg.dir/link.txt --verbose=1 /usr/bin/ar qc libmsg.a CMakeFiles/msg.dir/Msg.cpp.o CMakeFiles/msg.dir/DiagonalMsg.cpp.o CMakeFiles/msg.dir/OneToAllMsg.cpp.o CMakeFiles/msg.dir/OneToOneMsg.cpp.o CMakeFiles/msg.dir/SingleMsg.cpp.o CMakeFiles/msg.dir/SparseMsg.cpp.o CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o CMakeFiles/msg.dir/testMsg.cpp.o /usr/bin/ranlib libmsg.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 21%] Built target msg /usr/bin/gmake -f scheduling/CMakeFiles/scheduling.dir/build.make scheduling/CMakeFiles/scheduling.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling/CMakeFiles/scheduling.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f scheduling/CMakeFiles/scheduling.dir/build.make scheduling/CMakeFiles/scheduling.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 21%] Building CXX object scheduling/CMakeFiles/scheduling.dir/Clock.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT scheduling/CMakeFiles/scheduling.dir/Clock.cpp.o -MF CMakeFiles/scheduling.dir/Clock.cpp.o.d -o CMakeFiles/scheduling.dir/Clock.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/Clock.cpp [ 22%] Building CXX object randnum/CMakeFiles/randnum.dir/GammaRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/GammaRng.cpp.o -MF CMakeFiles/randnum.dir/GammaRng.cpp.o.d -o CMakeFiles/randnum.dir/GammaRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/GammaRng.cpp [ 23%] Building CXX object basecode/CMakeFiles/basecode.dir/doubleEq.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/doubleEq.cpp.o -MF CMakeFiles/basecode.dir/doubleEq.cpp.o.d -o CMakeFiles/basecode.dir/doubleEq.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/doubleEq.cpp [ 23%] Building CXX object basecode/CMakeFiles/basecode.dir/testAsync.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/testAsync.cpp.o -MF CMakeFiles/basecode.dir/testAsync.cpp.o.d -o CMakeFiles/basecode.dir/testAsync.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/testAsync.cpp [ 23%] Building CXX object shell/CMakeFiles/shell.dir/ShellThreads.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/ShellThreads.cpp.o -MF CMakeFiles/shell.dir/ShellThreads.cpp.o.d -o CMakeFiles/shell.dir/ShellThreads.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/ShellThreads.cpp [ 23%] Building CXX object shell/CMakeFiles/shell.dir/LoadModels.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/LoadModels.cpp.o -MF CMakeFiles/shell.dir/LoadModels.cpp.o.d -o CMakeFiles/shell.dir/LoadModels.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/LoadModels.cpp [ 23%] Building CXX object randnum/CMakeFiles/randnum.dir/Normal.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Normal.cpp.o -MF CMakeFiles/randnum.dir/Normal.cpp.o.d -o CMakeFiles/randnum.dir/Normal.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Normal.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Normal.cpp: In function ‘Normal::aliasMethod()’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Normal.cpp:311:50: warning: ‘uniform_prime’ may be used uninitialized [-Wmaybe-uninitialized] 311 | v_num = (unsigned long)(d*uniform*uniform*uniform_prime); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Normal.cpp:205:19: note: ‘uniform_prime’ was declared here 205 | unsigned long uniform_prime; | ^~~~~~~~~~~~~ [ 23%] Building CXX object randnum/CMakeFiles/randnum.dir/NormalRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/NormalRng.cpp.o -MF CMakeFiles/randnum.dir/NormalRng.cpp.o.d -o CMakeFiles/randnum.dir/NormalRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/NormalRng.cpp [ 24%] Building CXX object shell/CMakeFiles/shell.dir/SaveModels.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/SaveModels.cpp.o -MF CMakeFiles/shell.dir/SaveModels.cpp.o.d -o CMakeFiles/shell.dir/SaveModels.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/SaveModels.cpp [ 24%] Building CXX object shell/CMakeFiles/shell.dir/Neutral.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/Neutral.cpp.o -MF CMakeFiles/shell.dir/Neutral.cpp.o.d -o CMakeFiles/shell.dir/Neutral.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/Neutral.cpp [ 25%] Building CXX object randnum/CMakeFiles/randnum.dir/Poisson.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Poisson.cpp.o -MF CMakeFiles/randnum.dir/Poisson.cpp.o.d -o CMakeFiles/randnum.dir/Poisson.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Poisson.cpp [ 25%] Building CXX object randnum/CMakeFiles/randnum.dir/PoissonRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/PoissonRng.cpp.o -MF CMakeFiles/randnum.dir/PoissonRng.cpp.o.d -o CMakeFiles/randnum.dir/PoissonRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/PoissonRng.cpp [ 26%] Building CXX object randnum/CMakeFiles/randnum.dir/Probability.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Probability.cpp.o -MF CMakeFiles/randnum.dir/Probability.cpp.o.d -o CMakeFiles/randnum.dir/Probability.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Probability.cpp [ 26%] Building CXX object randnum/CMakeFiles/randnum.dir/RandGenerator.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/RandGenerator.cpp.o -MF CMakeFiles/randnum.dir/RandGenerator.cpp.o.d -o CMakeFiles/randnum.dir/RandGenerator.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/RandGenerator.cpp [ 26%] Building CXX object scheduling/CMakeFiles/scheduling.dir/testScheduling.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT scheduling/CMakeFiles/scheduling.dir/testScheduling.cpp.o -MF CMakeFiles/scheduling.dir/testScheduling.cpp.o.d -o CMakeFiles/scheduling.dir/testScheduling.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/testScheduling.cpp [ 27%] Linking CXX static library libscheduling.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/cmake -P CMakeFiles/scheduling.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/cmake -E cmake_link_script CMakeFiles/scheduling.dir/link.txt --verbose=1 /usr/bin/ar qc libscheduling.a CMakeFiles/scheduling.dir/Clock.cpp.o CMakeFiles/scheduling.dir/testScheduling.cpp.o /usr/bin/ranlib libscheduling.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 27%] Built target scheduling /usr/bin/gmake -f biophysics/CMakeFiles/biophysics.dir/build.make biophysics/CMakeFiles/biophysics.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics/CMakeFiles/biophysics.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f biophysics/CMakeFiles/biophysics.dir/build.make biophysics/CMakeFiles/biophysics.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 27%] Building CXX object randnum/CMakeFiles/randnum.dir/Uniform.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Uniform.cpp.o -MF CMakeFiles/randnum.dir/Uniform.cpp.o.d -o CMakeFiles/randnum.dir/Uniform.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Uniform.cpp [ 27%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IntFire.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/IntFire.cpp.o -MF CMakeFiles/biophysics.dir/IntFire.cpp.o.d -o CMakeFiles/biophysics.dir/IntFire.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/IntFire.cpp [ 28%] Building CXX object randnum/CMakeFiles/randnum.dir/UniformRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/UniformRng.cpp.o -MF CMakeFiles/randnum.dir/UniformRng.cpp.o.d -o CMakeFiles/randnum.dir/UniformRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/UniformRng.cpp [ 28%] Linking CXX static library libbasecode.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/cmake -P CMakeFiles/basecode.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/cmake -E cmake_link_script CMakeFiles/basecode.dir/link.txt --verbose=1 /usr/bin/ar qc libbasecode.a CMakeFiles/basecode.dir/consts.cpp.o CMakeFiles/basecode.dir/Element.cpp.o CMakeFiles/basecode.dir/DataElement.cpp.o CMakeFiles/basecode.dir/GlobalDataElement.cpp.o CMakeFiles/basecode.dir/LocalDataElement.cpp.o CMakeFiles/basecode.dir/Eref.cpp.o CMakeFiles/basecode.dir/Finfo.cpp.o CMakeFiles/basecode.dir/DestFinfo.cpp.o CMakeFiles/basecode.dir/Cinfo.cpp.o CMakeFiles/basecode.dir/SrcFinfo.cpp.o CMakeFiles/basecode.dir/ValueFinfo.cpp.o CMakeFiles/basecode.dir/SharedFinfo.cpp.o CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o CMakeFiles/basecode.dir/FieldElement.cpp.o CMakeFiles/basecode.dir/Id.cpp.o CMakeFiles/basecode.dir/ObjId.cpp.o CMakeFiles/basecode.dir/global.cpp.o CMakeFiles/basecode.dir/SetGet.cpp.o CMakeFiles/basecode.dir/OpFuncBase.cpp.o CMakeFiles/basecode.dir/EpFunc.cpp.o CMakeFiles/basecode.dir/HopFunc.cpp.o CMakeFiles/basecode.dir/SparseMatrix.cpp.o CMakeFiles/basecode.dir/doubleEq.cpp.o CMakeFiles/basecode.dir/testAsync.cpp.o /usr/bin/ranlib libbasecode.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 28%] Built target basecode /usr/bin/gmake -f builtins/CMakeFiles/moose_builtins.dir/build.make builtins/CMakeFiles/moose_builtins.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Arith.cpp.o -MF CMakeFiles/moose_builtins.dir/Arith.cpp.o.d -o CMakeFiles/moose_builtins.dir/Arith.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Arith.cpp [ 28%] Building CXX object randnum/CMakeFiles/randnum.dir/mt19937ar.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/mt19937ar.cpp.o -MF CMakeFiles/randnum.dir/mt19937ar.cpp.o.d -o CMakeFiles/randnum.dir/mt19937ar.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/mt19937ar.cpp In file included from /usr/include/sys/time.h:21, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/mt19937ar.cpp:49: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ [ 29%] Linking CXX static library librandnum.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/cmake -P CMakeFiles/randnum.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/cmake -E cmake_link_script CMakeFiles/randnum.dir/link.txt --verbose=1 /usr/bin/ar qc librandnum.a CMakeFiles/randnum.dir/Binomial.cpp.o CMakeFiles/randnum.dir/BinomialRng.cpp.o CMakeFiles/randnum.dir/Exponential.cpp.o CMakeFiles/randnum.dir/ExponentialRng.cpp.o CMakeFiles/randnum.dir/Gamma.cpp.o CMakeFiles/randnum.dir/GammaRng.cpp.o CMakeFiles/randnum.dir/Normal.cpp.o CMakeFiles/randnum.dir/NormalRng.cpp.o CMakeFiles/randnum.dir/Poisson.cpp.o CMakeFiles/randnum.dir/PoissonRng.cpp.o CMakeFiles/randnum.dir/Probability.cpp.o CMakeFiles/randnum.dir/RandGenerator.cpp.o CMakeFiles/randnum.dir/Uniform.cpp.o CMakeFiles/randnum.dir/UniformRng.cpp.o CMakeFiles/randnum.dir/mt19937ar.cpp.o /usr/bin/ranlib librandnum.a [ 30%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SpikeGen.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security 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'/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility/CMakeFiles/utility.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f utility/CMakeFiles/utility.dir/build.make utility/CMakeFiles/utility.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 31%] Building CXX object utility/CMakeFiles/utility.dir/strutil.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/strutil.cpp.o -MF CMakeFiles/utility.dir/strutil.cpp.o.d -o CMakeFiles/utility.dir/strutil.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/strutil.cpp [ 31%] Building CXX object utility/CMakeFiles/utility.dir/types.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/types.cpp.o -MF CMakeFiles/utility.dir/types.cpp.o.d -o CMakeFiles/utility.dir/types.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/types.cpp [ 32%] Building CXX object utility/CMakeFiles/utility.dir/setupenv.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/setupenv.cpp.o -MF CMakeFiles/utility.dir/setupenv.cpp.o.d -o CMakeFiles/utility.dir/setupenv.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/setupenv.cpp [ 33%] Building CXX object shell/CMakeFiles/shell.dir/Wildcard.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/Wildcard.cpp.o -MF CMakeFiles/shell.dir/Wildcard.cpp.o.d -o CMakeFiles/shell.dir/Wildcard.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/Wildcard.cpp [ 33%] Building CXX object utility/CMakeFiles/utility.dir/numutil.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/numutil.cpp.o -MF CMakeFiles/utility.dir/numutil.cpp.o.d -o CMakeFiles/utility.dir/numutil.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/numutil.cpp [ 33%] Building CXX object utility/CMakeFiles/utility.dir/Annotator.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/Annotator.cpp.o -MF CMakeFiles/utility.dir/Annotator.cpp.o.d -o CMakeFiles/utility.dir/Annotator.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/Annotator.cpp [ 34%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Group.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Group.cpp.o -MF CMakeFiles/moose_builtins.dir/Group.cpp.o.d -o CMakeFiles/moose_builtins.dir/Group.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Group.cpp [ 34%] Building CXX object biophysics/CMakeFiles/biophysics.dir/RandSpike.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/RandSpike.cpp.o -MF CMakeFiles/biophysics.dir/RandSpike.cpp.o.d -o CMakeFiles/biophysics.dir/RandSpike.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/RandSpike.cpp [ 34%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Mstring.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Mstring.cpp.o -MF CMakeFiles/moose_builtins.dir/Mstring.cpp.o.d -o CMakeFiles/moose_builtins.dir/Mstring.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Mstring.cpp [ 34%] Building CXX object shell/CMakeFiles/shell.dir/testShell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/testShell.cpp.o -MF CMakeFiles/shell.dir/testShell.cpp.o.d -o CMakeFiles/shell.dir/testShell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/testShell.cpp [ 34%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Func.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Func.cpp.o -MF CMakeFiles/moose_builtins.dir/Func.cpp.o.d -o CMakeFiles/moose_builtins.dir/Func.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Func.cpp [ 35%] Building CXX object utility/CMakeFiles/utility.dir/Vec.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/Vec.cpp.o -MF CMakeFiles/utility.dir/Vec.cpp.o.d -o CMakeFiles/utility.dir/Vec.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/Vec.cpp [ 35%] Building CXX object utility/CMakeFiles/utility.dir/cnpy.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/cnpy.cpp.o -MF CMakeFiles/utility.dir/cnpy.cpp.o.d -o CMakeFiles/utility.dir/cnpy.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp [ 36%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o -MF CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o.d -o CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CompartmentDataHolder.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp: In function ‘bool cnpy2::is_valid_numpy_file(FILE*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp:88:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 88 | fread( buffer, sizeof(char), __pre__size__, fp ); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CompartmentBase.cpp.o -MF CMakeFiles/biophysics.dir/CompartmentBase.cpp.o.d -o CMakeFiles/biophysics.dir/CompartmentBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CompartmentBase.cpp [ 37%] Linking CXX static library libutility.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/cmake -P CMakeFiles/utility.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility.dir/link.txt --verbose=1 /usr/bin/ar qc libutility.a CMakeFiles/utility.dir/strutil.cpp.o CMakeFiles/utility.dir/types.cpp.o CMakeFiles/utility.dir/setupenv.cpp.o CMakeFiles/utility.dir/numutil.cpp.o CMakeFiles/utility.dir/Annotator.cpp.o CMakeFiles/utility.dir/Vec.cpp.o CMakeFiles/utility.dir/cnpy.cpp.o /usr/bin/ranlib libutility.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 37%] Built target utility /usr/bin/gmake -f mesh/CMakeFiles/mesh.dir/build.make mesh/CMakeFiles/mesh.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 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mesh/CMakeFiles/mesh.dir/ChemCompt.cpp.o -MF CMakeFiles/mesh.dir/ChemCompt.cpp.o.d -o CMakeFiles/mesh.dir/ChemCompt.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/ChemCompt.cpp [ 37%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Compartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Compartment.cpp.o -MF CMakeFiles/biophysics.dir/Compartment.cpp.o.d -o CMakeFiles/biophysics.dir/Compartment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Compartment.cpp [ 38%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SymCompartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SymCompartment.cpp.o -MF CMakeFiles/biophysics.dir/SymCompartment.cpp.o.d -o CMakeFiles/biophysics.dir/SymCompartment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SymCompartment.cpp [ 38%] Linking CXX static library libshell.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/cmake -P CMakeFiles/shell.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/cmake -E cmake_link_script CMakeFiles/shell.dir/link.txt --verbose=1 /usr/bin/ar qc libshell.a CMakeFiles/shell.dir/Shell.cpp.o CMakeFiles/shell.dir/ShellCopy.cpp.o CMakeFiles/shell.dir/ShellThreads.cpp.o CMakeFiles/shell.dir/LoadModels.cpp.o CMakeFiles/shell.dir/SaveModels.cpp.o CMakeFiles/shell.dir/Neutral.cpp.o CMakeFiles/shell.dir/Wildcard.cpp.o CMakeFiles/shell.dir/testShell.cpp.o /usr/bin/ranlib libshell.a [ 39%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshCompt.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/MeshCompt.cpp.o -MF CMakeFiles/mesh.dir/MeshCompt.cpp.o.d -o CMakeFiles/mesh.dir/MeshCompt.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/MeshCompt.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 39%] Built target shell /usr/bin/gmake -f mpi/CMakeFiles/moose_mpi.dir/build.make mpi/CMakeFiles/moose_mpi.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi/CMakeFiles/moose_mpi.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f mpi/CMakeFiles/moose_mpi.dir/build.make mpi/CMakeFiles/moose_mpi.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 39%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/PostMaster.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mpi/CMakeFiles/moose_mpi.dir/PostMaster.cpp.o -MF CMakeFiles/moose_mpi.dir/PostMaster.cpp.o.d -o CMakeFiles/moose_mpi.dir/PostMaster.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/PostMaster.cpp [ 39%] Building CXX object biophysics/CMakeFiles/biophysics.dir/GapJunction.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/GapJunction.cpp.o -MF CMakeFiles/biophysics.dir/GapJunction.cpp.o.d -o CMakeFiles/biophysics.dir/GapJunction.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/GapJunction.cpp [ 40%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Function.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Function.cpp.o -MF CMakeFiles/moose_builtins.dir/Function.cpp.o.d -o CMakeFiles/moose_builtins.dir/Function.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Function.cpp [ 40%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshEntry.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/MeshEntry.cpp.o -MF CMakeFiles/mesh.dir/MeshEntry.cpp.o.d -o CMakeFiles/mesh.dir/MeshEntry.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/MeshEntry.cpp [ 41%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/testMpi.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mpi/CMakeFiles/moose_mpi.dir/testMpi.cpp.o -MF CMakeFiles/moose_mpi.dir/testMpi.cpp.o.d -o CMakeFiles/moose_mpi.dir/testMpi.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/testMpi.cpp [ 41%] Linking CXX static library libmoose_mpi.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/cmake -P CMakeFiles/moose_mpi.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/cmake -E cmake_link_script CMakeFiles/moose_mpi.dir/link.txt --verbose=1 /usr/bin/ar qc libmoose_mpi.a CMakeFiles/moose_mpi.dir/PostMaster.cpp.o CMakeFiles/moose_mpi.dir/testMpi.cpp.o /usr/bin/ranlib libmoose_mpi.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 41%] Built target moose_mpi /usr/bin/gmake -f signeur/CMakeFiles/signeur.dir/build.make signeur/CMakeFiles/signeur.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur/CMakeFiles/signeur.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f signeur/CMakeFiles/signeur.dir/build.make signeur/CMakeFiles/signeur.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 42%] Building CXX object signeur/CMakeFiles/signeur.dir/Adaptor.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../kinetics -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT signeur/CMakeFiles/signeur.dir/Adaptor.cpp.o -MF CMakeFiles/signeur.dir/Adaptor.cpp.o.d -o CMakeFiles/signeur.dir/Adaptor.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/Adaptor.cpp [ 42%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ChanBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ChanBase.cpp.o -MF CMakeFiles/biophysics.dir/ChanBase.cpp.o.d -o CMakeFiles/biophysics.dir/ChanBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ChanBase.cpp [ 42%] Building CXX object signeur/CMakeFiles/signeur.dir/testSigNeur.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../kinetics -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT signeur/CMakeFiles/signeur.dir/testSigNeur.cpp.o -MF CMakeFiles/signeur.dir/testSigNeur.cpp.o.d -o CMakeFiles/signeur.dir/testSigNeur.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/testSigNeur.cpp [ 42%] Linking CXX static library libsigneur.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/cmake -P CMakeFiles/signeur.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/cmake -E cmake_link_script CMakeFiles/signeur.dir/link.txt --verbose=1 /usr/bin/ar qc libsigneur.a CMakeFiles/signeur.dir/Adaptor.cpp.o CMakeFiles/signeur.dir/testSigNeur.cpp.o /usr/bin/ranlib libsigneur.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 42%] Built target signeur /usr/bin/gmake -f ksolve/CMakeFiles/ksolve.dir/build.make ksolve/CMakeFiles/ksolve.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve/CMakeFiles/ksolve.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f ksolve/CMakeFiles/ksolve.dir/build.make ksolve/CMakeFiles/ksolve.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 42%] Building CXX object ksolve/CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o -MF CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o.d -o CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/KinSparseMatrix.cpp [ 43%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ChanCommon.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ChanCommon.cpp.o -MF CMakeFiles/biophysics.dir/ChanCommon.cpp.o.d -o CMakeFiles/biophysics.dir/ChanCommon.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ChanCommon.cpp [ 43%] Building CXX object mesh/CMakeFiles/mesh.dir/CubeMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CubeMesh.cpp.o -MF CMakeFiles/mesh.dir/CubeMesh.cpp.o.d -o CMakeFiles/mesh.dir/CubeMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CubeMesh.cpp [ 44%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombiePool.cpp.o -MF CMakeFiles/ksolve.dir/ZombiePool.cpp.o.d -o CMakeFiles/ksolve.dir/ZombiePool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombiePool.cpp [ 44%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannel.cpp.o -MF CMakeFiles/biophysics.dir/HHChannel.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannel.cpp [ 44%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieFunction.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieFunction.cpp.o -MF CMakeFiles/ksolve.dir/ZombieFunction.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieFunction.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieFunction.cpp [ 45%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannelBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannelBase.cpp.o -MF CMakeFiles/biophysics.dir/HHChannelBase.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannelBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannelBase.cpp [ 45%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Variable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Variable.cpp.o -MF CMakeFiles/moose_builtins.dir/Variable.cpp.o.d -o CMakeFiles/moose_builtins.dir/Variable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Variable.cpp [ 45%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o -MF CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieBufPool.cpp [ 46%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieReac.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieReac.cpp.o -MF CMakeFiles/ksolve.dir/ZombieReac.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieReac.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieReac.cpp [ 47%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/InputVariable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/InputVariable.cpp.o -MF CMakeFiles/moose_builtins.dir/InputVariable.cpp.o.d -o CMakeFiles/moose_builtins.dir/InputVariable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/InputVariable.cpp [ 47%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieEnz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieEnz.cpp.o -MF CMakeFiles/ksolve.dir/ZombieEnz.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieEnz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieEnz.cpp [ 47%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannel2D.cpp.o -MF CMakeFiles/biophysics.dir/HHChannel2D.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannel2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannel2D.cpp [ 47%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TableBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/TableBase.cpp.o -MF CMakeFiles/moose_builtins.dir/TableBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/TableBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/TableBase.cpp [ 47%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o -MF CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieMMenz.cpp [ 48%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o -MF CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o.d -o CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/VoxelPoolsBase.cpp [ 49%] Building CXX object mesh/CMakeFiles/mesh.dir/CylBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CylBase.cpp.o -MF CMakeFiles/mesh.dir/CylBase.cpp.o.d -o CMakeFiles/mesh.dir/CylBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CylBase.cpp [ 49%] Building CXX object mesh/CMakeFiles/mesh.dir/CylMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CylMesh.cpp.o -MF CMakeFiles/mesh.dir/CylMesh.cpp.o.d -o CMakeFiles/mesh.dir/CylMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CylMesh.cpp [ 49%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPools.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/VoxelPools.cpp.o -MF CMakeFiles/ksolve.dir/VoxelPools.cpp.o.d -o CMakeFiles/ksolve.dir/VoxelPools.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/VoxelPools.cpp [ 50%] Building CXX object ksolve/CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o -MF CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o.d -o CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/GssaVoxelPools.cpp [ 50%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHGate.cpp.o -MF CMakeFiles/biophysics.dir/HHGate.cpp.o.d -o CMakeFiles/biophysics.dir/HHGate.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHGate.cpp [ 50%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Table.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Table.cpp.o -MF CMakeFiles/moose_builtins.dir/Table.cpp.o.d -o CMakeFiles/moose_builtins.dir/Table.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Table.cpp [ 50%] Building CXX object ksolve/CMakeFiles/ksolve.dir/RateTerm.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/RateTerm.cpp.o -MF CMakeFiles/ksolve.dir/RateTerm.cpp.o.d -o CMakeFiles/ksolve.dir/RateTerm.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/RateTerm.cpp [ 50%] Building CXX object ksolve/CMakeFiles/ksolve.dir/FuncTerm.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/FuncTerm.cpp.o -MF CMakeFiles/ksolve.dir/FuncTerm.cpp.o.d -o CMakeFiles/ksolve.dir/FuncTerm.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/FuncTerm.cpp [ 51%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroNode.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/NeuroNode.cpp.o -MF CMakeFiles/mesh.dir/NeuroNode.cpp.o.d -o CMakeFiles/mesh.dir/NeuroNode.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/NeuroNode.cpp [ 52%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Stoich.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Stoich.cpp.o -MF CMakeFiles/ksolve.dir/Stoich.cpp.o.d -o CMakeFiles/ksolve.dir/Stoich.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Stoich.cpp [ 53%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Interpol.cpp.o -MF CMakeFiles/moose_builtins.dir/Interpol.cpp.o.d -o CMakeFiles/moose_builtins.dir/Interpol.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Interpol.cpp [ 53%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/NeuroMesh.cpp.o -MF CMakeFiles/mesh.dir/NeuroMesh.cpp.o.d -o CMakeFiles/mesh.dir/NeuroMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/NeuroMesh.cpp [ 54%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHGate2D.cpp.o -MF CMakeFiles/biophysics.dir/HHGate2D.cpp.o.d -o CMakeFiles/biophysics.dir/HHGate2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHGate2D.cpp [ 54%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o -MF CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o.d -o CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/StimulusTable.cpp [ 54%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConcBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CaConcBase.cpp.o -MF CMakeFiles/biophysics.dir/CaConcBase.cpp.o.d -o CMakeFiles/biophysics.dir/CaConcBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CaConcBase.cpp [ 54%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TimeTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/TimeTable.cpp.o -MF CMakeFiles/moose_builtins.dir/TimeTable.cpp.o.d -o CMakeFiles/moose_builtins.dir/TimeTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/TimeTable.cpp [ 55%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CaConc.cpp.o -MF CMakeFiles/biophysics.dir/CaConc.cpp.o.d -o CMakeFiles/biophysics.dir/CaConc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CaConc.cpp [ 55%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MgBlock.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MgBlock.cpp.o -MF CMakeFiles/biophysics.dir/MgBlock.cpp.o.d -o CMakeFiles/biophysics.dir/MgBlock.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MgBlock.cpp [ 56%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o -MF CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/StreamerBase.cpp [ 56%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Ksolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Ksolve.cpp.o -MF CMakeFiles/ksolve.dir/Ksolve.cpp.o.d -o CMakeFiles/ksolve.dir/Ksolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Ksolve.cpp [ 56%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Nernst.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Nernst.cpp.o -MF CMakeFiles/biophysics.dir/Nernst.cpp.o.d -o CMakeFiles/biophysics.dir/Nernst.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Nernst.cpp [ 56%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Streamer.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Streamer.cpp.o -MF CMakeFiles/moose_builtins.dir/Streamer.cpp.o.d -o CMakeFiles/moose_builtins.dir/Streamer.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Streamer.cpp [ 56%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineEntry.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/SpineEntry.cpp.o -MF CMakeFiles/mesh.dir/SpineEntry.cpp.o.d -o CMakeFiles/mesh.dir/SpineEntry.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/SpineEntry.cpp [ 57%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/SpineMesh.cpp.o -MF CMakeFiles/mesh.dir/SpineMesh.cpp.o.d -o CMakeFiles/mesh.dir/SpineMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/SpineMesh.cpp [ 58%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Neuron.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Neuron.cpp.o -MF CMakeFiles/biophysics.dir/Neuron.cpp.o.d -o CMakeFiles/biophysics.dir/Neuron.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Neuron.cpp [ 58%] Building CXX object mesh/CMakeFiles/mesh.dir/PsdMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/PsdMesh.cpp.o -MF CMakeFiles/mesh.dir/PsdMesh.cpp.o.d -o CMakeFiles/mesh.dir/PsdMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/PsdMesh.cpp [ 59%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Stats.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Stats.cpp.o -MF CMakeFiles/moose_builtins.dir/Stats.cpp.o.d -o CMakeFiles/moose_builtins.dir/Stats.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Stats.cpp [ 60%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Gsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Gsolve.cpp.o -MF CMakeFiles/ksolve.dir/Gsolve.cpp.o.d -o CMakeFiles/ksolve.dir/Gsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Gsolve.cpp [ 60%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o -MF CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o.d -o CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Interpol2D.cpp [ 61%] Building CXX object mesh/CMakeFiles/mesh.dir/testMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/testMesh.cpp.o -MF CMakeFiles/mesh.dir/testMesh.cpp.o.d -o CMakeFiles/mesh.dir/testMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/testMesh.cpp [ 61%] Linking CXX static library libmesh.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/cmake -P CMakeFiles/mesh.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mesh.dir/link.txt --verbose=1 /usr/bin/ar qc libmesh.a CMakeFiles/mesh.dir/ChemCompt.cpp.o CMakeFiles/mesh.dir/MeshCompt.cpp.o CMakeFiles/mesh.dir/MeshEntry.cpp.o CMakeFiles/mesh.dir/CubeMesh.cpp.o CMakeFiles/mesh.dir/CylBase.cpp.o CMakeFiles/mesh.dir/CylMesh.cpp.o CMakeFiles/mesh.dir/NeuroNode.cpp.o CMakeFiles/mesh.dir/NeuroMesh.cpp.o CMakeFiles/mesh.dir/SpineEntry.cpp.o CMakeFiles/mesh.dir/SpineMesh.cpp.o CMakeFiles/mesh.dir/PsdMesh.cpp.o CMakeFiles/mesh.dir/testMesh.cpp.o /usr/bin/ranlib libmesh.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 61%] Built target mesh /usr/bin/gmake -f hsolve/CMakeFiles/hsolve.dir/build.make hsolve/CMakeFiles/hsolve.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve/CMakeFiles/hsolve.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f hsolve/CMakeFiles/hsolve.dir/build.make hsolve/CMakeFiles/hsolve.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 62%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveStruct.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveStruct.cpp.o -MF CMakeFiles/hsolve.dir/HSolveStruct.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveStruct.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveStruct.cpp [ 62%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HinesMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HinesMatrix.cpp.o -MF CMakeFiles/hsolve.dir/HinesMatrix.cpp.o.d -o CMakeFiles/hsolve.dir/HinesMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HinesMatrix.cpp [ 62%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o -MF CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp [ 63%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolvePassive.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolvePassive.cpp.o -MF CMakeFiles/hsolve.dir/HSolvePassive.cpp.o.d -o CMakeFiles/hsolve.dir/HSolvePassive.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolvePassive.cpp [ 63%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadCell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ReadCell.cpp.o -MF CMakeFiles/biophysics.dir/ReadCell.cpp.o.d -o CMakeFiles/biophysics.dir/ReadCell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ReadCell.cpp [ 63%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o -MF CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o.d -o CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombiePoolInterface.cpp [ 63%] Building CXX object hsolve/CMakeFiles/hsolve.dir/RateLookup.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/RateLookup.cpp.o -MF CMakeFiles/hsolve.dir/RateLookup.cpp.o.d -o CMakeFiles/hsolve.dir/RateLookup.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/RateLookup.cpp [ 63%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActive.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveActive.cpp.o -MF CMakeFiles/hsolve.dir/HSolveActive.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveActive.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveActive.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp: In function ‘require_group(long, std::__cxx11::basic_string, std::allocator >)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp:107:12: warning: ‘current’ may be used uninitialized [-Wmaybe-uninitialized] 107 | return current; | ^~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp:87:24: note: ‘current’ was declared here 87 | hid_t prev = file, current; | ^~~~~~~ [ 64%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o -MF CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveActiveSetup.cpp [ 64%] Building CXX object ksolve/CMakeFiles/ksolve.dir/testKsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/testKsolve.cpp.o -MF CMakeFiles/ksolve.dir/testKsolve.cpp.o.d -o CMakeFiles/ksolve.dir/testKsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/testKsolve.cpp [ 65%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SwcSegment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SwcSegment.cpp.o -MF CMakeFiles/biophysics.dir/SwcSegment.cpp.o.d -o CMakeFiles/biophysics.dir/SwcSegment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SwcSegment.cpp [ 65%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadSwc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ReadSwc.cpp.o -MF CMakeFiles/biophysics.dir/ReadSwc.cpp.o.d -o CMakeFiles/biophysics.dir/ReadSwc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ReadSwc.cpp [ 65%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SynChan.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SynChan.cpp.o -MF CMakeFiles/biophysics.dir/SynChan.cpp.o.d -o CMakeFiles/biophysics.dir/SynChan.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SynChan.cpp [ 65%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveInterface.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveInterface.cpp.o -MF CMakeFiles/hsolve.dir/HSolveInterface.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveInterface.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveInterface.cpp [ 66%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o -MF CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o.d -o CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/NSDFWriter.cpp [ 67%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolve.cpp.o -MF CMakeFiles/hsolve.dir/HSolve.cpp.o.d -o CMakeFiles/hsolve.dir/HSolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp [ 68%] Building CXX object biophysics/CMakeFiles/biophysics.dir/NMDAChan.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/NMDAChan.cpp.o -MF CMakeFiles/biophysics.dir/NMDAChan.cpp.o.d -o CMakeFiles/biophysics.dir/NMDAChan.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/NMDAChan.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp: In member function ‘void HSolve::zombify(Eref) const’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:218:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 218 | for ( i = compartmentId_.begin(); i != compartmentId_.end(); ++i ) | ^~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:222:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 222 | temp.clear(); | ^~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:226:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 226 | for ( i = caConcId_.begin(); i != caConcId_.end(); ++i ) | ^~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:229:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 229 | temp.clear(); | ^~~~ [ 69%] Building CXX object ksolve/CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o -MF CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o.d -o CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/SteadyStateGsl.cpp [ 69%] Building CXX object biophysics/CMakeFiles/biophysics.dir/testBiophysics.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/testBiophysics.cpp.o -MF CMakeFiles/biophysics.dir/testBiophysics.cpp.o.d -o CMakeFiles/biophysics.dir/testBiophysics.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/testBiophysics.cpp [ 70%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o -MF CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o.d -o CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/IzhikevichNrn.cpp [ 70%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o -MF CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o.d -o CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5DataWriter.cpp [ 70%] Building CXX object biophysics/CMakeFiles/biophysics.dir/DifShell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/DifShell.cpp.o -MF CMakeFiles/biophysics.dir/DifShell.cpp.o.d -o CMakeFiles/biophysics.dir/DifShell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/DifShell.cpp [ 70%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveUtils.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveUtils.cpp.o -MF CMakeFiles/hsolve.dir/HSolveUtils.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveUtils.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveUtils.cpp [ 71%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o -MF CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o.d -o CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/SpikeStats.cpp [ 71%] Linking CXX static library libksolve.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/cmake -P CMakeFiles/ksolve.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/cmake -E cmake_link_script CMakeFiles/ksolve.dir/link.txt --verbose=1 /usr/bin/ar qc libksolve.a CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o CMakeFiles/ksolve.dir/ZombiePool.cpp.o CMakeFiles/ksolve.dir/ZombieFunction.cpp.o CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o CMakeFiles/ksolve.dir/ZombieReac.cpp.o CMakeFiles/ksolve.dir/ZombieEnz.cpp.o CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o CMakeFiles/ksolve.dir/VoxelPools.cpp.o CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o CMakeFiles/ksolve.dir/RateTerm.cpp.o CMakeFiles/ksolve.dir/FuncTerm.cpp.o CMakeFiles/ksolve.dir/Stoich.cpp.o CMakeFiles/ksolve.dir/Ksolve.cpp.o CMakeFiles/ksolve.dir/Gsolve.cpp.o CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o CMakeFiles/ksolve.dir/testKsolve.cpp.o CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o /usr/bin/ranlib libksolve.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 71%] Built target ksolve /usr/bin/gmake -f diffusion/CMakeFiles/diffusion.dir/build.make diffusion/CMakeFiles/diffusion.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion/CMakeFiles/diffusion.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f diffusion/CMakeFiles/diffusion.dir/build.make diffusion/CMakeFiles/diffusion.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 71%] Building CXX object diffusion/CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o -MF CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o.d -o CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/FastMatrixElim.cpp [ 71%] Building CXX object hsolve/CMakeFiles/hsolve.dir/testHSolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/testHSolve.cpp.o -MF CMakeFiles/hsolve.dir/testHSolve.cpp.o.d -o CMakeFiles/hsolve.dir/testHSolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/testHSolve.cpp [ 72%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o -MF CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieCompartment.cpp [ 72%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Leakage.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Leakage.cpp.o -MF CMakeFiles/biophysics.dir/Leakage.cpp.o.d -o CMakeFiles/biophysics.dir/Leakage.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Leakage.cpp [ 72%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o -MF CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o.d -o CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testBuiltins.cpp [ 73%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VectorTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/VectorTable.cpp.o -MF CMakeFiles/biophysics.dir/VectorTable.cpp.o.d -o CMakeFiles/biophysics.dir/VectorTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/VectorTable.cpp [ 73%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o -MF CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieCaConc.cpp [ 73%] Building CXX object diffusion/CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o -MF CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o.d -o CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/DiffPoolVec.cpp [ 74%] Building CXX object diffusion/CMakeFiles/diffusion.dir/Dsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/Dsolve.cpp.o -MF CMakeFiles/diffusion.dir/Dsolve.cpp.o.d -o CMakeFiles/diffusion.dir/Dsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/Dsolve.cpp [ 75%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o -MF CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieHHChannel.cpp [ 75%] Linking CXX static library libhsolve.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/cmake -P CMakeFiles/hsolve.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/cmake -E cmake_link_script CMakeFiles/hsolve.dir/link.txt --verbose=1 /usr/bin/ar qc libhsolve.a CMakeFiles/hsolve.dir/HSolveStruct.cpp.o CMakeFiles/hsolve.dir/HinesMatrix.cpp.o CMakeFiles/hsolve.dir/HSolvePassive.cpp.o CMakeFiles/hsolve.dir/RateLookup.cpp.o CMakeFiles/hsolve.dir/HSolveActive.cpp.o CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o CMakeFiles/hsolve.dir/HSolveInterface.cpp.o CMakeFiles/hsolve.dir/HSolve.cpp.o CMakeFiles/hsolve.dir/HSolveUtils.cpp.o CMakeFiles/hsolve.dir/testHSolve.cpp.o CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o /usr/bin/ranlib libhsolve.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 75%] Built target hsolve /usr/bin/gmake -f device/CMakeFiles/device.dir/build.make device/CMakeFiles/device.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device/CMakeFiles/device.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f device/CMakeFiles/device.dir/build.make device/CMakeFiles/device.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 75%] Building CXX object device/CMakeFiles/device.dir/PulseGen.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/PulseGen.cpp.o -MF CMakeFiles/device.dir/PulseGen.cpp.o.d -o CMakeFiles/device.dir/PulseGen.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/PulseGen.cpp [ 75%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testNSDF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 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CMakeFiles/moose_builtins.dir/testNSDF.cpp.o.d -o CMakeFiles/moose_builtins.dir/testNSDF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp [ 75%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o -MF CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovRateTable.cpp [ 76%] Linking CXX static library libmoose_builtins.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/cmake -P CMakeFiles/moose_builtins.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/cmake -E cmake_link_script CMakeFiles/moose_builtins.dir/link.txt --verbose=1 /usr/bin/ar qc libmoose_builtins.a CMakeFiles/moose_builtins.dir/Arith.cpp.o CMakeFiles/moose_builtins.dir/Group.cpp.o CMakeFiles/moose_builtins.dir/Mstring.cpp.o CMakeFiles/moose_builtins.dir/Func.cpp.o CMakeFiles/moose_builtins.dir/Function.cpp.o CMakeFiles/moose_builtins.dir/Variable.cpp.o CMakeFiles/moose_builtins.dir/InputVariable.cpp.o CMakeFiles/moose_builtins.dir/TableBase.cpp.o CMakeFiles/moose_builtins.dir/Table.cpp.o CMakeFiles/moose_builtins.dir/Interpol.cpp.o CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o CMakeFiles/moose_builtins.dir/TimeTable.cpp.o CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o CMakeFiles/moose_builtins.dir/Streamer.cpp.o CMakeFiles/moose_builtins.dir/Stats.cpp.o CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o CMakeFiles/moose_builtins.dir/testNSDF.cpp.o /usr/bin/ranlib libmoose_builtins.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 76%] Built target moose_builtins /usr/bin/gmake -f benchmarks/CMakeFiles/benchmarks.dir/build.make benchmarks/CMakeFiles/benchmarks.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks/CMakeFiles/benchmarks.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f benchmarks/CMakeFiles/benchmarks.dir/build.make benchmarks/CMakeFiles/benchmarks.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 76%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/benchmarks.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT benchmarks/CMakeFiles/benchmarks.dir/benchmarks.cpp.o -MF CMakeFiles/benchmarks.dir/benchmarks.cpp.o.d -o CMakeFiles/benchmarks.dir/benchmarks.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/benchmarks.cpp [ 77%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/kineticMarks.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT benchmarks/CMakeFiles/benchmarks.dir/kineticMarks.cpp.o -MF CMakeFiles/benchmarks.dir/kineticMarks.cpp.o.d -o CMakeFiles/benchmarks.dir/kineticMarks.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/kineticMarks.cpp [ 77%] Linking CXX static library libbenchmarks.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/cmake -P CMakeFiles/benchmarks.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmarks.dir/link.txt --verbose=1 /usr/bin/ar qc libbenchmarks.a CMakeFiles/benchmarks.dir/benchmarks.cpp.o CMakeFiles/benchmarks.dir/kineticMarks.cpp.o /usr/bin/ranlib libbenchmarks.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 77%] Built target benchmarks /usr/bin/gmake -f kinetics/CMakeFiles/kinetics.dir/build.make kinetics/CMakeFiles/kinetics.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics/CMakeFiles/kinetics.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f kinetics/CMakeFiles/kinetics.dir/build.make kinetics/CMakeFiles/kinetics.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 78%] Building CXX object kinetics/CMakeFiles/kinetics.dir/PoolBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/PoolBase.cpp.o -MF CMakeFiles/kinetics.dir/PoolBase.cpp.o.d -o CMakeFiles/kinetics.dir/PoolBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/PoolBase.cpp [ 78%] Building CXX object device/CMakeFiles/device.dir/DiffAmp.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/DiffAmp.cpp.o -MF CMakeFiles/device.dir/DiffAmp.cpp.o.d -o CMakeFiles/device.dir/DiffAmp.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/DiffAmp.cpp [ 79%] Building CXX object device/CMakeFiles/device.dir/PIDController.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/PIDController.cpp.o -MF CMakeFiles/device.dir/PIDController.cpp.o.d -o CMakeFiles/device.dir/PIDController.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/PIDController.cpp [ 79%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Pool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Pool.cpp.o -MF CMakeFiles/kinetics.dir/Pool.cpp.o.d -o CMakeFiles/kinetics.dir/Pool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Pool.cpp [ 79%] Building CXX object diffusion/CMakeFiles/diffusion.dir/testDiffusion.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/testDiffusion.cpp.o -MF CMakeFiles/diffusion.dir/testDiffusion.cpp.o.d -o CMakeFiles/diffusion.dir/testDiffusion.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/testDiffusion.cpp [ 79%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovChannel.cpp.o -MF CMakeFiles/biophysics.dir/MarkovChannel.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovChannel.cpp [ 80%] Building CXX object kinetics/CMakeFiles/kinetics.dir/BufPool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/BufPool.cpp.o -MF CMakeFiles/kinetics.dir/BufPool.cpp.o.d -o CMakeFiles/kinetics.dir/BufPool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/BufPool.cpp [ 80%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReacBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReacBase.cpp.o -MF CMakeFiles/kinetics.dir/ReacBase.cpp.o.d -o CMakeFiles/kinetics.dir/ReacBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReacBase.cpp [ 80%] Building CXX object device/CMakeFiles/device.dir/RC.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/RC.cpp.o -MF CMakeFiles/device.dir/RC.cpp.o.d -o CMakeFiles/device.dir/RC.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/RC.cpp [ 81%] Linking CXX static library libdevice.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/cmake -P CMakeFiles/device.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/cmake -E cmake_link_script CMakeFiles/device.dir/link.txt --verbose=1 /usr/bin/ar qc libdevice.a CMakeFiles/device.dir/PulseGen.cpp.o CMakeFiles/device.dir/DiffAmp.cpp.o CMakeFiles/device.dir/PIDController.cpp.o CMakeFiles/device.dir/RC.cpp.o /usr/bin/ranlib libdevice.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 81%] Built target device /usr/bin/gmake -f synapse/CMakeFiles/synapse.dir/build.make synapse/CMakeFiles/synapse.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse/CMakeFiles/synapse.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f synapse/CMakeFiles/synapse.dir/build.make synapse/CMakeFiles/synapse.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 82%] Building CXX object synapse/CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o -MF CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o.d -o CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/GraupnerBrunel2012CaPlasticitySynHandler.cpp [ 82%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Reac.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Reac.cpp.o -MF CMakeFiles/kinetics.dir/Reac.cpp.o.d -o CMakeFiles/kinetics.dir/Reac.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Reac.cpp [ 82%] Linking CXX static library libdiffusion.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/cmake -P CMakeFiles/diffusion.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/diffusion.dir/link.txt --verbose=1 /usr/bin/ar qc libdiffusion.a CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o CMakeFiles/diffusion.dir/Dsolve.cpp.o CMakeFiles/diffusion.dir/testDiffusion.cpp.o /usr/bin/ranlib libdiffusion.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 82%] Built target diffusion [ 82%] Building CXX object synapse/CMakeFiles/synapse.dir/RollingMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/RollingMatrix.cpp.o -MF CMakeFiles/synapse.dir/RollingMatrix.cpp.o.d -o CMakeFiles/synapse.dir/RollingMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/RollingMatrix.cpp [ 83%] Building CXX object kinetics/CMakeFiles/kinetics.dir/EnzBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/EnzBase.cpp.o -MF CMakeFiles/kinetics.dir/EnzBase.cpp.o.d -o CMakeFiles/kinetics.dir/EnzBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/EnzBase.cpp [ 84%] Building CXX object synapse/CMakeFiles/synapse.dir/STDPSynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/STDPSynHandler.cpp.o -MF CMakeFiles/synapse.dir/STDPSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/STDPSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/STDPSynHandler.cpp [ 85%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MatrixOps.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MatrixOps.cpp.o -MF CMakeFiles/biophysics.dir/MatrixOps.cpp.o.d -o CMakeFiles/biophysics.dir/MatrixOps.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp: In function ‘matMatAdd(std::vector >, std::allocator > > >*, std::vector >, std::allocator > > >*, double, double, unsigned int)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp:128:17: warning: ‘C’ may be used uninitialized [-Wmaybe-uninitialized] 128 | Matrix *C; | ^ [ 85%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o -MF CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolverBase.cpp [ 85%] Building CXX object kinetics/CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o -MF CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o.d -o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/CplxEnzBase.cpp [ 85%] Building CXX object synapse/CMakeFiles/synapse.dir/STDPSynapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/STDPSynapse.cpp.o -MF CMakeFiles/synapse.dir/STDPSynapse.cpp.o.d -o CMakeFiles/synapse.dir/STDPSynapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/STDPSynapse.cpp [ 85%] Building CXX object synapse/CMakeFiles/synapse.dir/SeqSynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SeqSynHandler.cpp.o -MF CMakeFiles/synapse.dir/SeqSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/SeqSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SeqSynHandler.cpp [ 86%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Enz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Enz.cpp.o -MF CMakeFiles/kinetics.dir/Enz.cpp.o.d -o CMakeFiles/kinetics.dir/Enz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Enz.cpp [ 87%] Building CXX object synapse/CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o -MF CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SimpleSynHandler.cpp [ 87%] Building CXX object kinetics/CMakeFiles/kinetics.dir/MMenz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/MMenz.cpp.o -MF CMakeFiles/kinetics.dir/MMenz.cpp.o.d -o CMakeFiles/kinetics.dir/MMenz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/MMenz.cpp [ 87%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Species.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Species.cpp.o -MF CMakeFiles/kinetics.dir/Species.cpp.o.d -o CMakeFiles/kinetics.dir/Species.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Species.cpp [ 87%] Building CXX object synapse/CMakeFiles/synapse.dir/SynHandlerBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SynHandlerBase.cpp.o -MF CMakeFiles/synapse.dir/SynHandlerBase.cpp.o.d -o CMakeFiles/synapse.dir/SynHandlerBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SynHandlerBase.cpp [ 88%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolver.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovSolver.cpp.o -MF CMakeFiles/biophysics.dir/MarkovSolver.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovSolver.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp: In member function ‘MarkovSolver::computePadeApproximant(std::vector >, std::allocator > > >*, unsigned int)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:211:27: warning: ‘U’ may be used uninitialized [-Wmaybe-uninitialized] 211 | VplusU = matMatAdd( U, V, 1.0, 1.0 ); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:84:17: note: ‘U’ was declared here 84 | Matrix *U, *V, *VplusU, *VminusU, *invVminusU, *Qpower; | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:211:27: warning: ‘V’ may be used uninitialized [-Wmaybe-uninitialized] 211 | VplusU = matMatAdd( U, V, 1.0, 1.0 ); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:84:21: note: ‘V’ was declared here 84 | Matrix *U, *V, *VplusU, *VminusU, *invVminusU, *Qpower; | ^ [ 89%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadKkit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReadKkit.cpp.o -MF CMakeFiles/kinetics.dir/ReadKkit.cpp.o.d -o CMakeFiles/kinetics.dir/ReadKkit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReadKkit.cpp [ 90%] Building CXX object synapse/CMakeFiles/synapse.dir/Synapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/Synapse.cpp.o -MF CMakeFiles/synapse.dir/Synapse.cpp.o.d -o CMakeFiles/synapse.dir/Synapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/Synapse.cpp [ 90%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VClamp.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/VClamp.cpp.o -MF CMakeFiles/biophysics.dir/VClamp.cpp.o.d -o CMakeFiles/biophysics.dir/VClamp.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/VClamp.cpp [ 90%] Building CXX object synapse/CMakeFiles/synapse.dir/testSynapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/testSynapse.cpp.o -MF CMakeFiles/synapse.dir/testSynapse.cpp.o.d -o CMakeFiles/synapse.dir/testSynapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/testSynapse.cpp [ 90%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Spine.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Spine.cpp.o -MF CMakeFiles/biophysics.dir/Spine.cpp.o.d -o CMakeFiles/biophysics.dir/Spine.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Spine.cpp [ 90%] Linking CXX static library libsynapse.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/cmake -P CMakeFiles/synapse.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/cmake -E cmake_link_script CMakeFiles/synapse.dir/link.txt --verbose=1 /usr/bin/ar qc libsynapse.a CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o CMakeFiles/synapse.dir/RollingMatrix.cpp.o CMakeFiles/synapse.dir/STDPSynHandler.cpp.o CMakeFiles/synapse.dir/STDPSynapse.cpp.o CMakeFiles/synapse.dir/SeqSynHandler.cpp.o CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o CMakeFiles/synapse.dir/SynHandlerBase.cpp.o CMakeFiles/synapse.dir/Synapse.cpp.o CMakeFiles/synapse.dir/testSynapse.cpp.o /usr/bin/ranlib libsynapse.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 90%] Built target synapse [ 91%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o -MF CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovGslSolver.cpp [ 91%] Building CXX object kinetics/CMakeFiles/kinetics.dir/WriteKkit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/WriteKkit.cpp.o -MF CMakeFiles/kinetics.dir/WriteKkit.cpp.o.d -o CMakeFiles/kinetics.dir/WriteKkit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadCspace.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReadCspace.cpp.o -MF CMakeFiles/kinetics.dir/ReadCspace.cpp.o.d -o CMakeFiles/kinetics.dir/ReadCspace.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReadCspace.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp: In function ‘void writePlot(std::ofstream&, Id, std::string, std::string, double, double)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:281:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 281 | if ( pos == string::npos ) | ^~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:283:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 283 | if ( pos == string::npos ) | ^~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp: In function ‘void storePlotMsgs(Id, std::vector >&, Id, std::string, Id)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:422:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 422 | if ( pos == string::npos ) | ^~ In file included from /usr/include/c++/14/cassert:44, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/header.h:29, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:15: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:424:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 424 | assert( pos != string::npos ); | ^~~~~~ [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o -MF CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o.d -o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/lookupVolumeFromMesh.cpp [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o -MF CMakeFiles/kinetics.dir/testKinetics.cpp.o.d -o CMakeFiles/kinetics.dir/testKinetics.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/testKinetics.cpp [ 92%] Linking CXX static library libbiophysics.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/cmake -P CMakeFiles/biophysics.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/cmake -E cmake_link_script CMakeFiles/biophysics.dir/link.txt --verbose=1 /usr/bin/ar qc libbiophysics.a CMakeFiles/biophysics.dir/IntFire.cpp.o CMakeFiles/biophysics.dir/SpikeGen.cpp.o CMakeFiles/biophysics.dir/RandSpike.cpp.o CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o CMakeFiles/biophysics.dir/CompartmentBase.cpp.o CMakeFiles/biophysics.dir/Compartment.cpp.o CMakeFiles/biophysics.dir/SymCompartment.cpp.o CMakeFiles/biophysics.dir/GapJunction.cpp.o CMakeFiles/biophysics.dir/ChanBase.cpp.o CMakeFiles/biophysics.dir/ChanCommon.cpp.o CMakeFiles/biophysics.dir/HHChannel.cpp.o CMakeFiles/biophysics.dir/HHChannelBase.cpp.o CMakeFiles/biophysics.dir/HHChannel2D.cpp.o CMakeFiles/biophysics.dir/HHGate.cpp.o CMakeFiles/biophysics.dir/HHGate2D.cpp.o CMakeFiles/biophysics.dir/CaConcBase.cpp.o CMakeFiles/biophysics.dir/CaConc.cpp.o CMakeFiles/biophysics.dir/MgBlock.cpp.o CMakeFiles/biophysics.dir/Nernst.cpp.o CMakeFiles/biophysics.dir/Neuron.cpp.o CMakeFiles/biophysics.dir/ReadCell.cpp.o CMakeFiles/biophysics.dir/SwcSegment.cpp.o CMakeFiles/biophysics.dir/ReadSwc.cpp.o CMakeFiles/biophysics.dir/SynChan.cpp.o CMakeFiles/biophysics.dir/NMDAChan.cpp.o CMakeFiles/biophysics.dir/testBiophysics.cpp.o CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o CMakeFiles/biophysics.dir/DifShell.cpp.o CMakeFiles/biophysics.dir/Leakage.cpp.o CMakeFiles/biophysics.dir/VectorTable.cpp.o CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o CMakeFiles/biophysics.dir/MarkovChannel.cpp.o CMakeFiles/biophysics.dir/MatrixOps.cpp.o CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o CMakeFiles/biophysics.dir/MarkovSolver.cpp.o CMakeFiles/biophysics.dir/VClamp.cpp.o CMakeFiles/biophysics.dir/Spine.cpp.o CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o /usr/bin/ranlib libbiophysics.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 92%] Built target biophysics [ 93%] Linking CXX static library libkinetics.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/cmake -P CMakeFiles/kinetics.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/cmake -E cmake_link_script CMakeFiles/kinetics.dir/link.txt --verbose=1 /usr/bin/ar qc libkinetics.a CMakeFiles/kinetics.dir/PoolBase.cpp.o CMakeFiles/kinetics.dir/Pool.cpp.o CMakeFiles/kinetics.dir/BufPool.cpp.o CMakeFiles/kinetics.dir/ReacBase.cpp.o CMakeFiles/kinetics.dir/Reac.cpp.o CMakeFiles/kinetics.dir/EnzBase.cpp.o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o CMakeFiles/kinetics.dir/Enz.cpp.o CMakeFiles/kinetics.dir/MMenz.cpp.o CMakeFiles/kinetics.dir/Species.cpp.o CMakeFiles/kinetics.dir/ReadKkit.cpp.o CMakeFiles/kinetics.dir/WriteKkit.cpp.o CMakeFiles/kinetics.dir/ReadCspace.cpp.o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o CMakeFiles/kinetics.dir/testKinetics.cpp.o /usr/bin/ranlib libkinetics.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 93%] Built target kinetics /usr/bin/gmake -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/depend /usr/bin/gmake -f pymoose/CMakeFiles/_moose.dir/build.make pymoose/CMakeFiles/_moose.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/libmoose.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose/CMakeFiles/_moose.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/build /usr/bin/gmake -f pymoose/CMakeFiles/_moose.dir/build.make pymoose/CMakeFiles/_moose.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 94%] Building CXX object CMakeFiles/libmoose.dir/basecode/main.cpp.o [ 94%] Building CXX object pymoose/CMakeFiles/_moose.dir/vec.cpp.o [ 94%] Building CXX object pymoose/CMakeFiles/_moose.dir/moosemodule.cpp.o [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/mfield.cpp.o /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_LIB -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -Dlibmoose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg 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/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/moosemodule.cpp.o -MF CMakeFiles/_moose.dir/moosemodule.cpp.o.d -o CMakeFiles/_moose.dir/moosemodule.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS 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-grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/mfield.cpp.o -MF CMakeFiles/_moose.dir/mfield.cpp.o.d -o CMakeFiles/_moose.dir/mfield.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/mfield.cpp [ 95%] Linking CXX shared library libmoose.so /usr/bin/cmake -E cmake_link_script CMakeFiles/libmoose.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libmoose.so -o libmoose.so CMakeFiles/libmoose.dir/basecode/main.cpp.o -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -Wl,--whole-archive external/muparser/libmuparser.a builtins/libmoose_builtins.a msg/libmsg.a benchmarks/libbenchmarks.a shell/libshell.a randnum/librandnum.a scheduling/libscheduling.a mpi/libmoose_mpi.a biophysics/libbiophysics.a utility/libutility.a kinetics/libkinetics.a synapse/libsynapse.a intfire/libintfire.a hsolve/libhsolve.a mesh/libmesh.a signeur/libsigneur.a diffusion/libdiffusion.a ksolve/libksolve.a device/libdevice.a basecode/libbasecode.a -Wl,--no-whole-archive -lhdf5_cpp -lhdf5 -lhdf5_hl_cpp -lhdf5_hl -lgsl -lgslcblas In file included from /usr/include/c++/14/x86_64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:42: In member function ‘std::__new_allocator::construct(PyGetSetDef*, PyGetSetDef const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, PyGetSetDef*, PyGetSetDef const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:534:17, inlined from ‘std::vector >::push_back(PyGetSetDef const&)’ at /usr/include/c++/14/bits/stl_vector.h:1288:30, inlined from ‘defineLookupFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2821:46: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp: In function ‘defineLookupFinfos(Cinfo const*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2820:21: note: ‘getset’ declared here 2820 | PyGetSetDef getset; | ^~~~~~ In file included from /usr/include/c++/14/vector:66, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../utility/print_function.hpp:29, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:60: In member function ‘std::vector >::push_back(PyGetSetDef const&)’, inlined from ‘defineLookupFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2821:46: /usr/include/c++/14/bits/stl_vector.h:1294:28: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 1294 | _M_realloc_append(__x); | ~~~~~~~~~~~~~~~~~^~~~~ In file included from /usr/include/c++/14/vector:72: /usr/include/c++/14/bits/vector.tcc: In function ‘defineLookupFinfos(Cinfo const*)’: /usr/include/c++/14/bits/vector.tcc:581:7: note: by argument 2 of type ‘const struct PyGetSetDef &’ to ‘std::vector >::_M_realloc_append(PyGetSetDef const&)void’ declared here 581 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2820:21: note: ‘getset’ declared here 2820 | PyGetSetDef getset; | ^~~~~~ In member function ‘std::__new_allocator::construct(PyGetSetDef*, PyGetSetDef const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, PyGetSetDef*, PyGetSetDef const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:534:17, inlined from ‘std::vector >::push_back(PyGetSetDef const&)’ at /usr/include/c++/14/bits/stl_vector.h:1288:30, inlined from ‘defineElementFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2897:46: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp: In function ‘defineElementFinfos(Cinfo const*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2896:21: note: ‘getset’ declared here 2896 | PyGetSetDef getset; | ^~~~~~ In member function ‘std::vector >::push_back(PyGetSetDef const&)’, inlined from ‘defineElementFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2897:46: /usr/include/c++/14/bits/stl_vector.h:1294:28: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 1294 | _M_realloc_append(__x); | ~~~~~~~~~~~~~~~~~^~~~~ /usr/include/c++/14/bits/vector.tcc: In function ‘defineElementFinfos(Cinfo const*)’: /usr/include/c++/14/bits/vector.tcc:581:7: note: by argument 2 of type ‘const struct PyGetSetDef &’ to ‘std::vector >::_M_realloc_append(PyGetSetDef const&)void’ declared here 581 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2896:21: note: ‘getset’ declared here 2896 | PyGetSetDef getset; | ^~~~~~ [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/pymooseinit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/pymooseinit.cpp.o -MF CMakeFiles/_moose.dir/pymooseinit.cpp.o.d -o CMakeFiles/_moose.dir/pymooseinit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/pymooseinit.cpp [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/melement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/melement.cpp.o -MF CMakeFiles/_moose.dir/melement.cpp.o.d -o CMakeFiles/_moose.dir/melement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/melement.cpp [ 96%] Building CXX object pymoose/CMakeFiles/_moose.dir/test_moosemodule.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/test_moosemodule.cpp.o -MF CMakeFiles/_moose.dir/test_moosemodule.cpp.o.d -o CMakeFiles/_moose.dir/test_moosemodule.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/test_moosemodule.cpp [ 96%] Building CXX object pymoose/CMakeFiles/_moose.dir/PyRun.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/PyRun.cpp.o -MF CMakeFiles/_moose.dir/PyRun.cpp.o.d -o CMakeFiles/_moose.dir/PyRun.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.cpp In file included from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.cpp:50: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.h: In function ‘std::string get_program_name()’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.h:58:41: warning: ‘wchar_t* Py_GetProgramName()’ is deprecated [-Wdeprecated-declarations] 58 | wchar_t * progname = Py_GetProgramName(); | ~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/python3.13/Python.h:123, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.cpp:48: /usr/include/python3.13/pylifecycle.h:38:43: note: declared here 38 | Py_DEPRECATED(3.13) PyAPI_FUNC(wchar_t *) Py_GetProgramName(void); | ^~~~~~~~~~~~~~~~~ /usr/bin/ld: /tmp/ccJuGcHb.ltrans17.ltrans.o: in function `testCreateStringDataset()': /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp:76:(.text+0x808c): warning: the use of `tmpnam' is dangerous, better use `mkstemp' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 96%] Built target libmoose /usr/bin/gmake -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/moose.bin.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 96%] Building CXX object CMakeFiles/moose.bin.dir/basecode/main.cpp.o /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT CMakeFiles/moose.bin.dir/basecode/main.cpp.o -MF CMakeFiles/moose.bin.dir/basecode/main.cpp.o.d -o CMakeFiles/moose.bin.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/main.cpp [ 97%] Linking CXX executable moose.bin /usr/bin/cmake -E cmake_link_script CMakeFiles/moose.bin.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id -rdynamic CMakeFiles/moose.bin.dir/basecode/main.cpp.o -o moose.bin -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -lmoose -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 97%] Built target moose.bin [ 98%] Linking CXX shared module ../python/moose/_moose.so cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/cmake -E cmake_link_script CMakeFiles/_moose.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id -shared -o ../python/moose/_moose.so CMakeFiles/_moose.dir/moosemodule.cpp.o CMakeFiles/_moose.dir/vec.cpp.o CMakeFiles/_moose.dir/mfield.cpp.o CMakeFiles/_moose.dir/pymooseinit.cpp.o CMakeFiles/_moose.dir/melement.cpp.o CMakeFiles/_moose.dir/test_moosemodule.cpp.o CMakeFiles/_moose.dir/PyRun.cpp.o -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -Wl,--whole-archive ../external/muparser/libmuparser.a ../builtins/libmoose_builtins.a ../msg/libmsg.a ../benchmarks/libbenchmarks.a ../shell/libshell.a ../randnum/librandnum.a ../scheduling/libscheduling.a ../mpi/libmoose_mpi.a ../biophysics/libbiophysics.a ../utility/libutility.a ../kinetics/libkinetics.a ../synapse/libsynapse.a ../intfire/libintfire.a ../hsolve/libhsolve.a ../mesh/libmesh.a ../signeur/libsigneur.a ../diffusion/libdiffusion.a ../ksolve/libksolve.a ../device/libdevice.a ../basecode/libbasecode.a -Wl,--no-whole-archive -lhdf5_cpp -lhdf5 -lhdf5_hl_cpp -lhdf5_hl -lgsl -lgslcblas /usr/bin/ld: /tmp/ccPJX2BV.ltrans58.ltrans.o: in function `testCreateStringDataset()': /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp:76:(.text+0x421c): warning: the use of `tmpnam' is dangerous, better use `mkstemp' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/cmake -E cmake_echo_color --cyan "MOOSE python extention is successfully built. Now " " Run 'sudo make install' to install it. " " " "NOTE: Run 'pip uninstall moose' to uninstall moose." MOOSE python extention is successfully built. Now Run 'sudo make install' to install it. NOTE: Run 'pip uninstall moose' to uninstall moose. gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 98%] Built target _moose /usr/bin/gmake -f CMakeFiles/copy_pymoose.dir/build.make CMakeFiles/copy_pymoose.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/copy_pymoose.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/copy_pymoose.dir/build.make CMakeFiles/copy_pymoose.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 99%] Copying required python files from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python to to build directory /usr/bin/cmake -E copy_directory /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 99%] Built target copy_pymoose /usr/bin/gmake -f CMakeFiles/bdist.dir/build.make CMakeFiles/bdist.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/bdist.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/bdist.dir/build.make CMakeFiles/bdist.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [100%] bdist is saved to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python && /usr/bin/python3 setup.cmake.py bdist_dumb -p CMAKE -d /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist /usr/lib/python3.13/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() /usr/lib/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so Unarchiving bdist file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose_bdist_install /usr/bin/cmake -E chdir /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose_bdist_install tar xvf /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz ./ ./usr/ ./usr/lib/ ./usr/lib/python3.13/ ./usr/lib/python3.13/site-packages/ ./usr/lib/python3.13/site-packages/moose/ ./usr/lib/python3.13/site-packages/moose/SBML/ ./usr/lib/python3.13/site-packages/moose/SBML/__init__.py ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/ ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/readSBML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/validation.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/writeSBML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/SBML/readSBML.py ./usr/lib/python3.13/site-packages/moose/SBML/validation.py ./usr/lib/python3.13/site-packages/moose/SBML/writeSBML.py ./usr/lib/python3.13/site-packages/moose/__init__.py ./usr/lib/python3.13/site-packages/moose/__pycache__/ ./usr/lib/python3.13/site-packages/moose/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/alternate.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/constants.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/graph_utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/graphutil.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/hdfutil.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/merge.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/methods_utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/moose.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/moose_config.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/moose_constants.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/moose_test.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/optimizer_interface.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/plot_utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/print_utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/recording.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/_moose.so ./usr/lib/python3.13/site-packages/moose/alternate.py ./usr/lib/python3.13/site-packages/moose/chemUtil/ ./usr/lib/python3.13/site-packages/moose/chemUtil/__init__.py ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/ ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/add_Delete_ChemicalSolver.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/chemConnectUtil.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/graphUtils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/chemUtil/add_Delete_ChemicalSolver.py ./usr/lib/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py ./usr/lib/python3.13/site-packages/moose/chemUtil/graphUtils.py ./usr/lib/python3.13/site-packages/moose/constants.py ./usr/lib/python3.13/site-packages/moose/genesis/ ./usr/lib/python3.13/site-packages/moose/genesis/__init__.py ./usr/lib/python3.13/site-packages/moose/genesis/__pycache__/ ./usr/lib/python3.13/site-packages/moose/genesis/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/genesis/__pycache__/writeKkit.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py ./usr/lib/python3.13/site-packages/moose/graph_utils.py ./usr/lib/python3.13/site-packages/moose/graphutil.py ./usr/lib/python3.13/site-packages/moose/hdfutil.py ./usr/lib/python3.13/site-packages/moose/merge.py ./usr/lib/python3.13/site-packages/moose/methods_utils.py ./usr/lib/python3.13/site-packages/moose/moose.py ./usr/lib/python3.13/site-packages/moose/moose_config.py ./usr/lib/python3.13/site-packages/moose/moose_constants.py ./usr/lib/python3.13/site-packages/moose/moose_test.py ./usr/lib/python3.13/site-packages/moose/neuroml/ ./usr/lib/python3.13/site-packages/moose/neuroml/ChannelML.py ./usr/lib/python3.13/site-packages/moose/neuroml/MorphML.py ./usr/lib/python3.13/site-packages/moose/neuroml/NetworkML.py ./usr/lib/python3.13/site-packages/moose/neuroml/NeuroML.py ./usr/lib/python3.13/site-packages/moose/neuroml/__init__.py ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/ ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/ChannelML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/MorphML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/NetworkML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/NeuroML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/utils.py ./usr/lib/python3.13/site-packages/moose/neuroml2/ ./usr/lib/python3.13/site-packages/moose/neuroml2/__init__.py ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/ ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/converter.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/generated_neuroml.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/generated_neuromlsub.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/hhfit.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/reader.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/test_converter.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/test_hhfit.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/test_reader.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/units.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/converter.py ./usr/lib/python3.13/site-packages/moose/neuroml2/generated_neuroml.py ./usr/lib/python3.13/site-packages/moose/neuroml2/generated_neuromlsub.py ./usr/lib/python3.13/site-packages/moose/neuroml2/hhfit.py ./usr/lib/python3.13/site-packages/moose/neuroml2/reader.py ./usr/lib/python3.13/site-packages/moose/neuroml2/test_converter.py ./usr/lib/python3.13/site-packages/moose/neuroml2/test_hhfit.py ./usr/lib/python3.13/site-packages/moose/neuroml2/test_reader.py ./usr/lib/python3.13/site-packages/moose/neuroml2/units.py ./usr/lib/python3.13/site-packages/moose/optimizer_interface.py ./usr/lib/python3.13/site-packages/moose/plot_utils.py ./usr/lib/python3.13/site-packages/moose/print_utils.py ./usr/lib/python3.13/site-packages/moose/recording.py ./usr/lib/python3.13/site-packages/moose/utils.py ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/ ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/PKG-INFO ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/SOURCES.txt ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/dependency_links.txt ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/requires.txt ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/top_level.txt ./usr/lib/python3.13/site-packages/rdesigneur/ ./usr/lib/python3.13/site-packages/rdesigneur/__init__.py ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/ ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/rdesigneur.cpython-313.pyc ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/rdesigneurProtos.cpython-313.pyc ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/rmoogli.cpython-313.pyc ./usr/lib/python3.13/site-packages/rdesigneur/rdesigneur.py ./usr/lib/python3.13/site-packages/rdesigneur/rdesigneurProtos.py ./usr/lib/python3.13/site-packages/rdesigneur/rmoogli.py gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [100%] Built target bdist gmake[1]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles 0 + pushd redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.cmake.py build '--executable=/usr/bin/python3 -sP' Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + popd + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.j01lvI + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + '[' /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT ++ dirname /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT + mkdir -p /builddir/build/BUILD/moose-3.1.5-build + mkdir /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + install -vD redhat-linux-build/moose.bin /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr' install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin' 'redhat-linux-build/moose.bin' -> '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose' + install -vDt /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/ redhat-linux-build/libmoose.so install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64' 'redhat-linux-build/libmoose.so' -> '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/libmoose.so' ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + pushd redhat-linux-build/python + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.cmake.py install -O1 --skip-build --root /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT --prefix /usr --install-lib=/usr/lib64/python3.13/site-packages /usr/lib/python3.13/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() /usr/lib64/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so + rm -rfv /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/__pycache__ + chmod +x /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/_moose.so + popd ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.1.5-24.fc42 --unique-debug-suffix -3.1.5-24.fc42.x86_64 --unique-debug-src-base moose-3.1.5-24.fc42.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 find-debuginfo: starting Extracting debug info from 3 files DWARF-compressing 3 files sepdebugcrcfix: Updated 3 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/moose-3.1.5-24.fc42.x86_64 7809 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13 using python3.13 /usr/lib64/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rmoogli.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rdesigneurProtos.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rdesigneurProtos.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/recording.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/print_utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/plot_utils.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/plot_utils.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/optimizer_interface.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/optimizer_interface.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/graphutil.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/methods_utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/merge.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/graph_utils.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/graph_utils.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose_test.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose_constants.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/hdfutil.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose_config.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/constants.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rdesigneur.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/SBML/__pycache__/validation.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/SBML/__pycache__/writeSBML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/SBML/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rdesigneur.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/genesis/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/alternate.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/SBML/__pycache__/readSBML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/NeuroML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/genesis/__pycache__/writeKkit.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/MorphML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/NetworkML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/test_converter.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/ChannelML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/hhfit.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/reader.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/units.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/reader.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/test_reader.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/converter.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/test_hhfit.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/chemUtil/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/chemUtil/__pycache__/graphUtils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/chemUtil/__pycache__/chemConnectUtil.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/chemUtil/__pycache__/add_Delete_ChemicalSolver.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/generated_neuromlsub.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/generated_neuroml.cpython-313.opt-1.pyc: rewriting with normalized contents Scanned 80 directories and 610 files, processed 54 inodes, 54 modified (14 replaced + 40 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/moose-3.1.5-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.wJQvjH + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + checksec --file=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose RELRO STACK CANARY NX PIE RPATH RUNPATH Symbols FORTIFY Fortified Fortifiable FILE Full RELRO Canary found NX enabled PIE enabled No RPATH No RUNPATH No Symbols No 0 1 /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + pushd redhat-linux-build + ctest --output-on-failure -V -E test_streamer UpdateCTestConfiguration from :/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Test project /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_function 1: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_function.py" 1: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 1: Environment variables: 1: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 1: Test timeout computed to be: 1500 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' 1: ''' Setup compartment and its members pool,reaction,enz cplx under self.meshEntry dictionaries \ 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' 1: splitpath = re.sub("\[[0-9]+\]", "", splitpath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' 1: tabPath = re.sub("\[[0-9]+\]", "", tabPath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' 1: tabPath = re.sub("\[[0-9]+\]", "", tabPath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' 1: f.write("call /kinetics/"+ trimPath(item)+"/notes LOAD \ \n\""+moose.Annotator(info).getField('notes')+"\"\n") 1: 0 0.0 1: 1 1.1 1: 2 2.211 1: 3 3.322 1: 4 4.433 1: 5 5.5440000000000005 1/13 Test #1: test_function .................... Passed 0.20 sec test 2 Start 2: test_kkit 2: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_kkit.py" 2: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 2: Environment variables: 2: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 2: Test timeout computed to be: 1500 2: Script dir /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 2/13 Test #2: test_kkit ........................ Passed 0.19 sec test 3 Start 3: test_ksolve 3: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_ksolve.py" 3: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 3: Environment variables: 3: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 3: Test timeout computed to be: 1500 3: Using moose from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 3: [INFO] Using method = rk5 3: [INFO] Time taken 0.0007169246673583984 3: Test passed 3/13 Test #3: test_ksolve ...................... Passed 0.19 sec test 4 Start 4: test_moose_paths 4: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_moose_paths.py" 4: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 4: Environment variables: 4: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 4: Test timeout computed to be: 1500 4/13 Test #4: test_moose_paths ................. Passed 0.19 sec test 5 Start 5: test_neuroml 5: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_neuroml.py" 5: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 5: Environment variables: 5: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 5: Test timeout computed to be: 1500 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? 5: if len(token) is 0: 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? 5: elif mechanismname is 'synapse': # synapse being added to the compartment 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? 5: elif mechanismname is 'spikegen': # spikegen being added to the compartment 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/cells_channels/CA1soma.morph.xml 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/cells_channels/CA1soma.morph.xml 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/CA1soma.net.xml 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/CA1soma.net.xml 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.networkml: INFO Creating population CA1group of cell type CA1soma 5: moose.nml.networkml: INFO Creating population CA1group of cell type CA1soma 5: moose.nml.networkml: INFO Creating input under /elec 5: moose.nml.networkml: INFO Creating input under /elec 5: For injected current 4e-13, no of spikes in 1.0 second: 10 5: For injected current 8e-13, no of spikes in 1.0 second: 20 5: For injected current 1.4e-12, no of spikes in 1.0 second: 29 5: For injected current 1.8e-12, no of spikes in 1.0 second: 34 5/13 Test #5: test_neuroml ..................... Passed 1.43 sec test 6 Start 6: test_nsdf 6: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_nsdf.py" 6: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 6: Environment variables: 6: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 6: Test timeout computed to be: 1500 6: using moose from: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 6: event input /model[0]/writer[0].eventInput 0 6: 6: /model[0]/writer[0]/eventInput[0] 6: 2024-10-26T01:25:39.960541 6: 2024-10-26T01:25:40.019713 6/13 Test #6: test_nsdf ........................ Passed 0.33 sec test 7 Start 7: test_pymoose 7: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_pymoose.py" 7: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 7: Environment variables: 7: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 7: Test timeout computed to be: 1500 7: ..............................0: Error: SetGet::strGet: Field Vm not found on Element z 7: 0: Error: SetGet::strGet: Field Vm not found on Element z 7: 0: Error: SetGet::strGet: Field Vm not found on Element z 7: .. 7: ---------------------------------------------------------------------- 7: Ran 32 tests in 0.004s 7: 7: OK 7: PyMOOSE Regression Tests: 7: Testing connect ... OK 7: Testing delete ... neutral207308729849178134113547265412049206284 neutral207308729849178134113547265412049206284/b 7: /neutral207308729849178134113547265412049206284[0] /neutral207308729849178134113547265412049206284[0]/b[0] 7: 3 3 7: neutral260682987774860173437230896745089482103 neutral260682987774860173437230896745089482103/b 7: /neutral260682987774860173437230896745089482103[0] /neutral260682987774860173437230896745089482103[0]/b[0] 7: 3 3 7: neutral11404202481079733865077226104181053436 neutral11404202481079733865077226104181053436/b 7: /neutral11404202481079733865077226104181053436[0] /neutral11404202481079733865077226104181053436[0]/b[0] 7: 3 3 7: neutral23804087034834880729182668909676891756 neutral23804087034834880729182668909676891756/b 7: /neutral23804087034834880729182668909676891756[0] /neutral23804087034834880729182668909676891756[0]/b[0] 7: 3 3 7: neutral13977699652932905132214437392372681952 neutral13977699652932905132214437392372681952/b 7: /neutral13977699652932905132214437392372681952[0] /neutral13977699652932905132214437392372681952[0]/b[0] 7: 3 3 7: neutral52208091028459411340258833476443956278 neutral52208091028459411340258833476443956278/b 7: /neutral52208091028459411340258833476443956278[0] /neutral52208091028459411340258833476443956278[0]/b[0] 7: 3 3 7: neutral24228852474919990201948099957996971927 neutral24228852474919990201948099957996971927/b 7: /neutral24228852474919990201948099957996971927[0] /neutral24228852474919990201948099957996971927[0]/b[0] 7: 3 3 7: neutral248675175432141355969727176866877158144 neutral248675175432141355969727176866877158144/b 7: /neutral248675175432141355969727176866877158144[0] /neutral248675175432141355969727176866877158144[0]/b[0] 7: 3 3 7: neutral159880187126748222297945775718918305200 neutral159880187126748222297945775718918305200/b 7: /neutral159880187126748222297945775718918305200[0] /neutral159880187126748222297945775718918305200[0]/b[0] 7: 3 3 7: neutral191316325141138653650000374019020982039 neutral191316325141138653650000374019020982039/b 7: /neutral191316325141138653650000374019020982039[0] /neutral191316325141138653650000374019020982039[0]/b[0] 7: 3 3 7: neutral323500651612574849214668348072212069261 neutral323500651612574849214668348072212069261/b 7: /neutral323500651612574849214668348072212069261[0] /neutral323500651612574849214668348072212069261[0]/b[0] 7: 3 3 7: neutral264271976391562899130566712402295877142 neutral264271976391562899130566712402295877142/b 7: /neutral264271976391562899130566712402295877142[0] /neutral264271976391562899130566712402295877142[0]/b[0] 7: 3 3 7: neutral251986450170928070677416469483631964709 neutral251986450170928070677416469483631964709/b 7: /neutral251986450170928070677416469483631964709[0] /neutral251986450170928070677416469483631964709[0]/b[0] 7: 3 3 7: neutral179454362036061689461980497789392087779 neutral179454362036061689461980497789392087779/b 7: /neutral179454362036061689461980497789392087779[0] /neutral179454362036061689461980497789392087779[0]/b[0] 7: 3 3 7: neutral121777944739752534359784677847153761894 neutral121777944739752534359784677847153761894/b 7: /neutral121777944739752534359784677847153761894[0] /neutral121777944739752534359784677847153761894[0]/b[0] 7: 3 3 7/13 Test #7: test_pymoose ..................... Passed 0.21 sec test 8 Start 8: test_pyrun 8: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_pyrun.py" 8: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 8: Environment variables: 8: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 8: Test timeout computed to be: 1500 8/13 Test #8: test_pyrun ....................... Passed 0.19 sec test 9 Start 9: test_sbml 9: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_sbml.py" 9: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 9: Environment variables: 9: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 9: Test timeout computed to be: 1500 9: line 3: (99507 [Warning]) In situations where a mathematical expression refers to extent, the units of extent should be consistent with the global extent units of the model. In models where the 'extentUnits' attribute has not been declared, libSBML does not yet have the functionality to verify accurately the consistency of the units in such expressions. 9: 9: line 29: (99508 [Warning]) In situations where a mathematical expression refers to a compartment, species or parameter, it is necessary to know the units of the object to establish unit consistency. In models where the units of an object have not been declared, libSBML does not yet have the functionality to accurately verify the consistency of the units in mathematical expressions referring to that object. 9: The units of the 'k1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 9: 9: line 29: (20702 [Warning]) If the attribute 'units' on a given Parameter object has not been set, then the unit of measurement associated with that parameter's value is undefined. 9: Reference: L3V1 Section 4.7.3 9: The with id 'k1' does not have a 'units' attribute. 9: 9: line 39: (99505 [Warning]) In situations where a mathematical expression contains literal numbers or parameters whose units have not been declared, it is not possible to verify accurately the consistency of the units in the expression. 9: The units of the expression 'compartment * k1 * S1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 9: 9: line 29: (80701 [Warning]) As a principle of best modeling practice, the units of a should be declared rather than be left undefined. Doing so improves the ability of software to check the consistency of units and helps make it easier to detect potential errors in models. 9: The with the id 'k1' does not have a 'units' attribute. 9: 9: 9: File: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/./chem_models/00001-sbml-l3v1.xml (Level 3, version 1) 9: model: > 9: functionDefinitions: 0 9: unitDefinitions: 3 9: compartmentTypes: 0 9: specieTypes: 0 9: compartments: 1 9: species: 2 9: parameters: 1 9: initialAssignments: 0 9: rules: 0 9: constraints: 0 9: reactions: 1 9: events: 0 9: 9: 9: Compartment size is 1 9: 9: 9: 9: 9: 9: 9: 9/13 Test #9: test_sbml ........................ Passed 0.20 sec test 10 Start 10: test_snippets 10: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_snippets.py" 10: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 10: Environment variables: 10: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 10: Test timeout computed to be: 1500 10: Testing snippets in /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/../../Demos/snippets 10: [INFO] Disabling all pylab/matplotlib show() functions 10/13 Test #10: test_snippets .................... Passed 0.02 sec test 11 Start 11: test_synchan 11: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_synchan.py" 11: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 11: Environment variables: 11: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 11: Test timeout computed to be: 1500 11: Using moose from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 11: ('Synapses:', 1, 'w=', 1.0) 11/13 Test #11: test_synchan ..................... Passed 0.19 sec test 12 Start 12: test_table_streaming_support 12: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_table_streaming_support.py" 12: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 12: Environment variables: 12: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 12: Test timeout computed to be: 1500 12: @ Sat Oct 26 01:25:41 2024: 10% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 20% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 30% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 40% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 50% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 60% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 70% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 80% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 90% of total 1000 seconds is over. 12: @ Sat Oct 26 01:25:41 2024: 100% of total 1000 seconds is over. 12: [INFO] Using moose form /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 12: outfile : _tables/compt/a/tabA.npy useStreamer: True Path: /compt[0]/a[0]/tabA[0] 12: outfile : table2.npy useStreamer: True Path: /compt[0]/b[0]/tabB[0] 12: outfile : tablec.csv useStreamer: True Path: /compt[0]/c[0]/tabC[0] 12: Starting moose for 1000 12: MOOSE is done 12: [(3.27854e-318, 1. ) (1.00000e+000, 0.92331735) 12: (2.00000e+000, 0.84777147) ... (9.98000e+002, 0.31806056) 12: (9.99000e+002, 0.31806056) (1.00000e+003, 0.31806056)] 12: [(3.27854e-318, 2. ) (1.00000e+000, 2.07704612) 12: (2.00000e+000, 2.15294716) ... (9.98000e+002, 2.68506706) 12: (9.99000e+002, 2.68506706) (1.00000e+003, 2.68506706)] 12: [[0.00000000e+00 5.00000000e-01] 12: [1.00000000e+00 5.76988371e-01] 12: [2.00000000e+00 6.52832515e-01] 12: ... 12: [9.98000000e+02 1.18455350e+00] 12: [9.99000000e+02 1.18455350e+00] 12: [1.00000000e+03 1.18455350e+00]] 12: [3.27854e-318 1.00000e+000 2.00000e+000 ... 9.98000e+002 9.99000e+002 12: 1.00000e+003] 12: [3.27854e-318 1.00000e+000 2.00000e+000 ... 9.98000e+002 9.99000e+002 12: 1.00000e+003] 12: [INFO] All tests passed 12/13 Test #12: test_table_streaming_support ..... Passed 0.20 sec test 13 Start 13: test_vec 13: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_vec.py" 13: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 13: Environment variables: 13: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 13: Test timeout computed to be: 1500 13/13 Test #13: test_vec ......................... Passed 0.18 sec The following tests passed: test_function test_kkit test_ksolve test_moose_paths test_neuroml test_nsdf test_pymoose test_pyrun test_sbml test_snippets test_synchan test_table_streaming_support test_vec 100% tests passed, 0 tests failed out of 13 Total Test time (real) = 3.75 sec + popd ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages + /usr/bin/python3 -c 'import moose; element = moose.Neutral("/yyy"); print(element.path)' /yyy[0] + RPM_EC=0 ++ jobs -p + exit 0 Processing files: moose-3.1.5-24.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.LQmxhr + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + DOCDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/README.md /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.EE7EXz + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + LICENSEDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/LICENSE /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + RPM_EC=0 ++ jobs -p + exit 0 Provides: libmoose.so()(64bit) moose = 3.1.5-24.fc42 moose(x86-64) = 3.1.5-24.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libhdf5.so.200()(64bit) libhdf5_hl.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmoose.so()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: python3-moose-3.1.5-24.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.No6nbK + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + DOCDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/README.md /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.dCpol2 + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + LICENSEDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/LICENSE /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-moose = 3.1.5-24.fc42 python3-moose = 3.1.5-24.fc42 python3-moose(x86-64) = 3.1.5-24.fc42 python3.13-moose = 3.1.5-24.fc42 python3.13dist(pymoose) = 3.1.5 python3dist(pymoose) = 3.1.5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libhdf5.so.200()(64bit) libhdf5_hl.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(numpy) rtld(GNU_HASH) Processing files: moose-debugsource-3.1.5-24.fc42.x86_64 Provides: moose-debugsource = 3.1.5-24.fc42 moose-debugsource(x86-64) = 3.1.5-24.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: moose-debuginfo-3.1.5-24.fc42.x86_64 Provides: debuginfo(build-id) = 23ed012326a9a5e6b46bf672994aeaebe083d662 debuginfo(build-id) = 3f8472b2ce17de690295db7441247cb183044845 libmoose.so-3.1.5-24.fc42.x86_64.debug()(64bit) moose-debuginfo = 3.1.5-24.fc42 moose-debuginfo(x86-64) = 3.1.5-24.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: moose-debugsource(x86-64) = 3.1.5-24.fc42 Processing files: python3-moose-debuginfo-3.1.5-24.fc42.x86_64 Provides: debuginfo(build-id) = 4a8492f7be8d218c1f6dcc1120ac3431c6f773df python-moose-debuginfo = 3.1.5-24.fc42 python3-moose-debuginfo = 3.1.5-24.fc42 python3-moose-debuginfo(x86-64) = 3.1.5-24.fc42 python3.13-moose-debuginfo = 3.1.5-24.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: moose-debugsource(x86-64) = 3.1.5-24.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT Wrote: /builddir/build/RPMS/moose-3.1.5-24.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/moose-debugsource-3.1.5-24.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-moose-3.1.5-24.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-moose-debuginfo-3.1.5-24.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/moose-debuginfo-3.1.5-24.fc42.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.F5pIbU + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + test -d /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/moose-3.1.5-build + rm -rf /builddir/build/BUILD/moose-3.1.5-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild moose-3.1.5-24.fc42.src.rpm Finish: build phase for moose-3.1.5-24.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1729905563.495216/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/moose-3.1.5-24.fc42.src.rpm) Config(child) 6 minutes 21 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "python3-moose-debuginfo", "epoch": null, "version": "3.1.5", "release": "24.fc42", "arch": "x86_64" }, { "name": "moose", "epoch": null, "version": "3.1.5", "release": "24.fc42", "arch": "src" }, { "name": "python3-moose", "epoch": null, "version": "3.1.5", "release": "24.fc42", "arch": "x86_64" }, { "name": "moose-debuginfo", "epoch": null, "version": "3.1.5", "release": "24.fc42", "arch": "x86_64" }, { "name": "moose", "epoch": null, "version": "3.1.5", "release": "24.fc42", "arch": "x86_64" }, { "name": "moose-debugsource", "epoch": null, "version": "3.1.5", "release": "24.fc42", "arch": "x86_64" } ] } RPMResults finished