Warning: Permanently added '54.208.49.187' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6255564-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64 Version: 0.68 PID: 19979 Logging PID: 19980 Task: {'appstream': False, 'background': True, 'build_id': 6255564, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': '493f220e687c1ba58e8e9439a90db81bf3fb31b5', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/ProDy', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'ProDy', 'package_version': '2.4.0-4', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository'}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--psimovec', 'source_json': {}, 'source_type': None, 'submitter': 'psimovec', 'tags': [], 'task_id': '6255564-fedora-rawhide-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/ProDy /var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/ProDy', '/var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy'... Running: git checkout 493f220e687c1ba58e8e9439a90db81bf3fb31b5 -- cmd: ['git', 'checkout', '493f220e687c1ba58e8e9439a90db81bf3fb31b5', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy rc: 0 stdout: stderr: Note: switching to '493f220e687c1ba58e8e9439a90db81bf3fb31b5'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 493f220 automatic import of ProDy Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading ProDy-2.4.0.tar.gz INFO: Calling: curl -H Pragma: -o ProDy-2.4.0.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/ProDy/ProDy-2.4.0.tar.gz/md5/cd8edbbd2ebe14a8f62fbb5c685f2e82/ProDy-2.4.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 21.2M 100 21.2M 0 0 47.7M 0 --:--:-- --:--:-- --:--:-- 47.8M /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated INFO: Reading stdout from command: md5sum ProDy-2.4.0.tar.gz Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1691513207.623559 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy/ProDy.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1691513207.623559/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 96 MB/s | 19 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 119 MB/s | 69 MB 00:00 fedora 48 MB/s | 69 MB 00:01 Last metadata expiration check: 0:00:04 ago on Tue Aug 8 16:47:11 2023. Dependencies resolved. ========================================================================================================================================= Package Arch Version Repository Size ========================================================================================================================================= Installing: dnf-plugins-core noarch 4.4.2-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k python3-dnf noarch 4.16.2-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 546 k Installing dependencies: alternatives aarch64 1.25-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k audit-libs aarch64 3.1.2-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 118 k basesystem noarch 11-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 k bash aarch64 5.2.15-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2-libs aarch64 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k ca-certificates noarch 2023.2.60_v7.0.306-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 837 k coreutils aarch64 9.3-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M coreutils-common aarch64 9.3-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 M crypto-policies noarch 20230731-1.git5ed06e0.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68 k curl aarch64 8.2.1-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 342 k cyrus-sasl-lib aarch64 2.1.28-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 781 k dbus-libs aarch64 1:1.14.8-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 156 k dnf-data noarch 4.16.2-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k elfutils-default-yama-scope noarch 0.189-4.fc39 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5.4.4-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106 k zchunk-libs aarch64 1.3.1-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51 k zlib aarch64 1.2.13-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93 k Transaction Summary ========================================================================================================================================= Install 137 Packages Total download size: 54 M Installed size: 260 M Downloading Packages: (1/137): basesystem-11-18.fc39.noarch.rpm 172 kB/s | 7.2 kB 00:00 (2/137): audit-libs-3.1.2-1.fc39.aarch64.rpm 2.7 MB/s | 118 kB 00:00 (3/137): alternatives-1.25-1.fc39.aarch64.rpm 823 kB/s | 38 kB 00:00 (4/137): bzip2-libs-1.0.8-16.fc39.aarch64.rpm 9.3 MB/s | 43 kB 00:00 (5/137): bash-5.2.15-5.fc39.aarch64.rpm 117 MB/s | 1.8 MB 00:00 (6/137): ca-certificates-2023.2.60_v7.0.306-2.f 64 MB/s | 837 kB 00:00 (7/137): coreutils-9.3-2.fc39.aarch64.rpm 71 MB/s | 1.1 MB 00:00 (8/137): crypto-policies-20230731-1.git5ed06e0. 12 MB/s | 68 kB 00:00 (9/137): coreutils-common-9.3-2.fc39.aarch64.rp 147 MB/s | 2.1 MB 00:00 (10/137): curl-8.2.1-1.fc39.aarch64.rpm 39 MB/s | 342 kB 00:00 (11/137): cyrus-sasl-lib-2.1.28-11.fc39.aarch64 74 MB/s | 781 kB 00:00 (12/137): dbus-libs-1.14.8-2.fc39.aarch64.rpm 33 MB/s | 156 kB 00:00 (13/137): dnf-data-4.16.2-2.fc39.noarch.rpm 10 MB/s | 38 kB 00:00 (14/137): dnf-plugins-core-4.4.2-1.fc39.noarch. 11 MB/s | 38 kB 00:00 (15/137): elfutils-default-yama-scope-0.189-4.f 4.3 MB/s | 13 kB 00:00 (16/137): elfutils-libelf-0.189-4.fc39.aarch64. 42 MB/s | 194 kB 00:00 (17/137): elfutils-libs-0.189-4.fc39.aarch64.rp 51 MB/s | 258 kB 00:00 (18/137): expat-2.5.0-3.fc39.aarch64.rpm 26 MB/s | 108 kB 00:00 (19/137): fedora-release-39-0.21.noarch.rpm 2.3 MB/s | 6.9 kB 00:00 (20/137): fedora-gpg-keys-39-0.4.noarch.rpm 28 MB/s | 118 kB 00:00 (21/137): fedora-release-common-39-0.21.noarch. 5.7 MB/s | 17 kB 00:00 (22/137): fedora-release-identity-basic-39-0.21 2.6 MB/s | 7.6 kB 00:00 (23/137): fedora-repos-39-0.4.noarch.rpm 3.1 MB/s | 9.3 kB 00:00 (24/137): fedora-repos-rawhide-39-0.4.noarch.rp 3.1 MB/s | 8.9 kB 00:00 (25/137): findutils-4.9.0-5.fc39.aarch64.rpm 60 MB/s | 485 kB 00:00 (26/137): file-libs-5.44-5.fc39.aarch64.rpm 62 MB/s | 729 kB 00:00 (27/137): filesystem-3.18-6.fc39.aarch64.rpm 87 MB/s | 1.1 MB 00:00 (28/137): gdbm-libs-1.23-4.fc39.aarch64.rpm 14 MB/s | 56 kB 00:00 (29/137): gawk-5.2.2-2.fc39.aarch64.rpm 74 MB/s | 1.0 MB 00:00 (30/137): glib2-2.77.1-1.fc39.aarch64.rpm 112 MB/s | 2.7 MB 00:00 (31/137): glibc-2.38-1.fc39.aarch64.rpm 75 MB/s | 1.7 MB 00:00 (32/137): glibc-common-2.38-1.fc39.aarch64.rpm 20 MB/s | 339 kB 00:00 (33/137): glibc-minimal-langpack-2.38-1.fc39.aa 11 MB/s | 67 kB 00:00 (34/137): gmp-6.2.1-5.fc39.aarch64.rpm 36 MB/s | 266 kB 00:00 (35/137): gnutls-3.8.0-7.fc39.aarch64.rpm 84 MB/s | 1.0 MB 00:00 (36/137): gpgme-1.20.0-5.fc39.aarch64.rpm 19 MB/s | 209 kB 00:00 (37/137): gnupg2-2.4.3-2.fc39.aarch64.rpm 100 MB/s | 2.6 MB 00:00 (38/137): grep-3.11-3.fc39.aarch64.rpm 31 MB/s | 285 kB 00:00 (39/137): ima-evm-utils-1.5-2.fc39.aarch64.rpm 8.5 MB/s | 63 kB 00:00 (40/137): json-c-0.16-5.fc39.aarch64.rpm 11 MB/s | 41 kB 00:00 (41/137): keyutils-libs-1.6.1-7.fc39.aarch64.rp 7.1 MB/s | 31 kB 00:00 (42/137): libacl-2.3.1-8.fc39.aarch64.rpm 5.4 MB/s | 23 kB 00:00 (43/137): krb5-libs-1.21-3.fc39.aarch64.rpm 70 MB/s | 767 kB 00:00 (44/137): libassuan-2.5.6-2.fc39.aarch64.rpm 12 MB/s | 66 kB 00:00 (45/137): libarchive-3.7.1-1.fc39.aarch64.rpm 44 MB/s | 402 kB 00:00 (46/137): libattr-2.5.1-8.fc39.aarch64.rpm 3.7 MB/s | 18 kB 00:00 (47/137): libb2-0.98.1-9.fc39.aarch64.rpm 4.9 MB/s | 24 kB 00:00 (48/137): libblkid-2.39.1-3.fc39.aarch64.rpm 23 MB/s | 115 kB 00:00 (49/137): libcap-2.48-7.fc39.aarch64.rpm 16 MB/s | 68 kB 00:00 (50/137): libbrotli-1.0.9-13.fc39.aarch64.rpm 51 MB/s | 319 kB 00:00 (51/137): libcap-ng-0.8.3-7.fc39.aarch64.rpm 7.4 MB/s | 32 kB 00:00 (52/137): libcom_err-1.47.0-2.fc39.aarch64.rpm 5.7 MB/s | 26 kB 00:00 (53/137): libcomps-0.1.19-3.fc39.aarch64.rpm 13 MB/s | 75 kB 00:00 (54/137): libcurl-8.2.1-1.fc39.aarch64.rpm 48 MB/s | 317 kB 00:00 (55/137): libeconf-0.4.0-6.fc39.aarch64.rpm 6.3 MB/s | 26 kB 00:00 (56/137): libdnf-0.70.2-1.fc39.aarch64.rpm 80 MB/s | 606 kB 00:00 (57/137): libevent-2.1.12-9.fc39.aarch64.rpm 42 MB/s | 254 kB 00:00 (58/137): libffi-3.4.4-4.fc39.aarch64.rpm 10 MB/s | 38 kB 00:00 (59/137): libfsverity-1.4-10.fc39.aarch64.rpm 5.6 MB/s | 19 kB 00:00 (60/137): libgcc-13.2.1-1.fc39.aarch64.rpm 25 MB/s | 94 kB 00:00 (61/137): libgpg-error-1.47-2.fc39.aarch64.rpm 37 MB/s | 224 kB 00:00 (62/137): libgcrypt-1.10.2-2.fc39.aarch64.rpm 46 MB/s | 451 kB 00:00 (63/137): libgomp-13.2.1-1.fc39.aarch64.rpm 35 MB/s | 311 kB 00:00 (64/137): libidn2-2.3.4-3.fc39.aarch64.rpm 22 MB/s | 111 kB 00:00 (65/137): libksba-1.6.4-2.fc39.aarch64.rpm 30 MB/s | 157 kB 00:00 (66/137): libmodulemd-2.15.0-5.fc39.aarch64.rpm 35 MB/s | 210 kB 00:00 (67/137): libmount-2.39.1-3.fc39.aarch64.rpm 36 MB/s | 153 kB 00:00 (68/137): libnsl2-2.0.0-6.fc39.aarch64.rpm 8.9 MB/s | 30 kB 00:00 (69/137): libnghttp2-1.55.1-2.fc39.aarch64.rpm 17 MB/s | 76 kB 00:00 (70/137): libpsl-0.21.2-4.fc39.aarch64.rpm 17 MB/s | 63 kB 00:00 (71/137): librepo-1.15.2-1.fc39.aarch64.rpm 27 MB/s | 94 kB 00:00 (72/137): libreport-filesystem-2.17.11-3.fc39.n 4.5 MB/s | 14 kB 00:00 (73/137): libselinux-3.5-5.fc39.aarch64.rpm 25 MB/s | 86 kB 00:00 (74/137): libsepol-3.5-2.fc39.aarch64.rpm 66 MB/s | 311 kB 00:00 (75/137): libsemanage-3.5-4.fc39.aarch64.rpm 21 MB/s | 117 kB 00:00 (76/137): libsigsegv-2.14-5.fc39.aarch64.rpm 7.9 MB/s | 27 kB 00:00 (77/137): libsmartcols-2.39.1-3.fc39.aarch64.rp 20 MB/s | 65 kB 00:00 (78/137): libsolv-0.7.24-8.fc39.aarch64.rpm 75 MB/s | 404 kB 00:00 (79/137): libssh-0.10.5-2.fc39.aarch64.rpm 41 MB/s | 212 kB 00:00 (80/137): libssh-config-0.10.5-2.fc39.noarch.rp 1.9 MB/s | 9.2 kB 00:00 (81/137): libtasn1-4.19.0-3.fc39.aarch64.rpm 20 MB/s | 73 kB 00:00 (82/137): libtirpc-1.3.3-1.rc2.fc39.aarch64.rpm 21 MB/s | 95 kB 00:00 (83/137): libstdc++-13.2.1-1.fc39.aarch64.rpm 79 MB/s | 810 kB 00:00 (84/137): libuuid-2.39.1-3.fc39.aarch64.rpm 7.7 MB/s | 28 kB 00:00 (85/137): libunistring-1.1-4.fc39.aarch64.rpm 68 MB/s | 540 kB 00:00 (86/137): libverto-0.3.2-6.fc39.aarch64.rpm 4.3 MB/s | 21 kB 00:00 (87/137): libxcrypt-4.4.36-2.fc39.aarch64.rpm 27 MB/s | 123 kB 00:00 (88/137): libyaml-0.2.5-12.fc39.aarch64.rpm 11 MB/s | 59 kB 00:00 (89/137): libzstd-1.5.5-4.fc39.aarch64.rpm 51 MB/s | 280 kB 00:00 (90/137): libxml2-2.10.4-3.fc39.aarch64.rpm 81 MB/s | 689 kB 00:00 (91/137): lz4-libs-1.9.4-4.fc39.aarch64.rpm 14 MB/s | 68 kB 00:00 (92/137): mpdecimal-2.5.1-7.fc39.aarch64.rpm 19 MB/s | 90 kB 00:00 (93/137): lua-libs-5.4.6-3.fc39.aarch64.rpm 20 MB/s | 131 kB 00:00 (94/137): ncurses-base-6.4-6.20230520.fc39.noar 16 MB/s | 63 kB 00:00 (95/137): mpfr-4.2.0-3.fc39.aarch64.rpm 44 MB/s | 319 kB 00:00 (96/137): ncurses-libs-6.4-6.20230520.fc39.aarc 49 MB/s | 326 kB 00:00 (97/137): nettle-3.9.1-2.fc39.aarch64.rpm 66 MB/s | 434 kB 00:00 (98/137): npth-1.6-14.fc39.aarch64.rpm 4.4 MB/s | 25 kB 00:00 (99/137): openldap-2.6.6-1.fc39.aarch64.rpm 35 MB/s | 251 kB 00:00 (100/137): p11-kit-trust-0.25.0-2.fc39.aarch64. 33 MB/s | 140 kB 00:00 (101/137): p11-kit-0.25.0-2.fc39.aarch64.rpm 50 MB/s | 466 kB 00:00 (102/137): openssl-libs-3.1.1-1.fc39.aarch64.rp 158 MB/s | 2.0 MB 00:00 (103/137): pcre2-syntax-10.42-1.fc39.2.noarch.r 22 MB/s | 143 kB 00:00 (104/137): pcre2-10.42-1.fc39.2.aarch64.rpm 20 MB/s | 219 kB 00:00 (105/137): popt-1.19-3.fc39.aarch64.rpm 12 MB/s | 59 kB 00:00 (106/137): publicsuffix-list-dafsa-20230614-2.f 15 MB/s | 57 kB 00:00 (107/137): python3-3.12.0~b4-3.fc39.aarch64.rpm 7.3 MB/s | 26 kB 00:00 (108/137): python3-dbus-1.3.2-4.fc39.aarch64.rp 30 MB/s | 146 kB 00:00 (109/137): python3-dateutil-2.8.2-10.fc39.noarc 41 MB/s | 344 kB 00:00 (110/137): python3-distro-1.8.0-6.fc39.noarch.r 12 MB/s | 44 kB 00:00 (111/137): python-pip-wheel-23.2.1-1.fc39.noarc 95 MB/s | 1.5 MB 00:00 (112/137): python3-dnf-4.16.2-2.fc39.noarch.rpm 97 MB/s | 546 kB 00:00 (113/137): python3-dnf-plugins-core-4.4.2-1.fc3 48 MB/s | 278 kB 00:00 (114/137): python3-gpg-1.20.0-5.fc39.aarch64.rp 52 MB/s | 280 kB 00:00 (115/137): python3-hawkey-0.70.2-1.fc39.aarch64 17 MB/s | 98 kB 00:00 (116/137): python3-libcomps-0.1.19-3.fc39.aarch 12 MB/s | 48 kB 00:00 (117/137): python3-libdnf-0.70.2-1.fc39.aarch64 108 MB/s | 772 kB 00:00 (118/137): python3-six-1.16.0-12.fc39.noarch.rp 9.0 MB/s | 41 kB 00:00 (119/137): python3-rpm-4.18.92-1.fc39.aarch64.r 8.6 MB/s | 68 kB 00:00 (120/137): python3-systemd-235-5.fc39.aarch64.r 15 MB/s | 101 kB 00:00 (121/137): readline-8.2-4.fc39.aarch64.rpm 22 MB/s | 211 kB 00:00 (122/137): rpm-4.18.92-1.fc39.aarch64.rpm 42 MB/s | 506 kB 00:00 (123/137): rpm-build-libs-4.18.92-1.fc39.aarch6 12 MB/s | 92 kB 00:00 (124/137): rpm-libs-4.18.92-1.fc39.aarch64.rpm 45 MB/s | 305 kB 00:00 (125/137): rpm-sequoia-1.4.1-2.fc39.aarch64.rpm 77 MB/s | 827 kB 00:00 (126/137): rpm-sign-libs-4.18.92-1.fc39.aarch64 6.5 MB/s | 26 kB 00:00 (127/137): python3-libs-3.12.0~b4-3.fc39.aarch6 165 MB/s | 8.8 MB 00:00 (128/137): sed-4.8-14.fc39.aarch64.rpm 24 MB/s | 295 kB 00:00 (129/137): setup-2.14.4-1.fc39.noarch.rpm 12 MB/s | 148 kB 00:00 (130/137): systemd-libs-254-1.fc39.aarch64.rpm 68 MB/s | 665 kB 00:00 (131/137): shadow-utils-4.13-8.fc39.aarch64.rpm 97 MB/s | 1.2 MB 00:00 (132/137): sqlite-libs-3.42.0-7.fc39.aarch64.rp 55 MB/s | 677 kB 00:00 (133/137): tpm2-tss-4.0.1-4.fc39.aarch64.rpm 78 MB/s | 655 kB 00:00 (134/137): tzdata-2023c-2.fc39.noarch.rpm 66 MB/s | 433 kB 00:00 (135/137): xz-libs-5.4.4-1.fc39.aarch64.rpm 16 MB/s | 106 kB 00:00 (136/137): zlib-1.2.13-4.fc39.aarch64.rpm 23 MB/s | 93 kB 00:00 (137/137): zchunk-libs-1.3.1-2.fc39.aarch64.rpm 12 MB/s | 51 kB 00:00 -------------------------------------------------------------------------------- Total 132 MB/s | 54 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.aarch64 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-1.fc39.aarch64 1/137 Running scriptlet: libgcc-13.2.1-1.fc39.aarch64 1/137 Installing : tzdata-2023c-2.fc39.noarch 2/137 Installing : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 3/137 Running scriptlet: crypto-policies-20230731-1.git5ed06e0.fc39.noarc 3/137 Installing : fedora-release-identity-basic-39-0.21.noarch 4/137 Installing : fedora-repos-rawhide-39-0.4.noarch 5/137 Installing : fedora-gpg-keys-39-0.4.noarch 6/137 Installing : fedora-repos-39-0.4.noarch 7/137 Installing : fedora-release-common-39-0.21.noarch 8/137 Installing : fedora-release-39-0.21.noarch 9/137 Installing : setup-2.14.4-1.fc39.noarch 10/137 Running scriptlet: setup-2.14.4-1.fc39.noarch 10/137 Installing : filesystem-3.18-6.fc39.aarch64 11/137 Installing : basesystem-11-18.fc39.noarch 12/137 Installing : publicsuffix-list-dafsa-20230614-2.fc39.noarch 13/137 Installing : 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libuuid-2.39.1-3.fc39.aarch64 30/137 Installing : readline-8.2-4.fc39.aarch64 31/137 Installing : libattr-2.5.1-8.fc39.aarch64 32/137 Installing : libacl-2.3.1-8.fc39.aarch64 33/137 Installing : libffi-3.4.4-4.fc39.aarch64 34/137 Installing : p11-kit-0.25.0-2.fc39.aarch64 35/137 Installing : libstdc++-13.2.1-1.fc39.aarch64 36/137 Installing : libunistring-1.1-4.fc39.aarch64 37/137 Installing : libidn2-2.3.4-3.fc39.aarch64 38/137 Installing : libxcrypt-4.4.36-2.fc39.aarch64 39/137 Installing : pcre2-10.42-1.fc39.2.aarch64 40/137 Installing : popt-1.19-3.fc39.aarch64 41/137 Installing : libassuan-2.5.6-2.fc39.aarch64 42/137 Installing : elfutils-libelf-0.189-4.fc39.aarch64 43/137 Installing : expat-2.5.0-3.fc39.aarch64 44/137 Installing : gdbm-libs-1:1.23-4.fc39.aarch64 45/137 Installing : json-c-0.16-5.fc39.aarch64 46/137 Installing : keyutils-libs-1.6.1-7.fc39.aarch64 47/137 Installing : libcom_err-1.47.0-2.fc39.aarch64 48/137 Installing : libgomp-13.2.1-1.fc39.aarch64 49/137 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69/137 Installing : nettle-3.9.1-2.fc39.aarch64 70/137 Installing : file-libs-5.44-5.fc39.aarch64 71/137 Installing : elfutils-default-yama-scope-0.189-4.fc39.noarch 72/137 Running scriptlet: elfutils-default-yama-scope-0.189-4.fc39.noarch 72/137 Installing : elfutils-libs-0.189-4.fc39.aarch64 73/137 Installing : alternatives-1.25-1.fc39.aarch64 74/137 Installing : p11-kit-trust-0.25.0-2.fc39.aarch64 75/137 Running scriptlet: p11-kit-trust-0.25.0-2.fc39.aarch64 75/137 Installing : gnutls-3.8.0-7.fc39.aarch64 76/137 Installing : glib2-2.77.1-1.fc39.aarch64 77/137 Installing : libbrotli-1.0.9-13.fc39.aarch64 78/137 Installing : libcap-ng-0.8.3-7.fc39.aarch64 79/137 Installing : audit-libs-3.1.2-1.fc39.aarch64 80/137 Installing : libsemanage-3.5-4.fc39.aarch64 81/137 Installing : libeconf-0.4.0-6.fc39.aarch64 82/137 Installing : shadow-utils-2:4.13-8.fc39.aarch64 83/137 Installing : libnghttp2-1.55.1-2.fc39.aarch64 84/137 Installing : libsigsegv-2.14-5.fc39.aarch64 85/137 Installing : gawk-5.2.2-2.fc39.aarch64 86/137 Installing : libverto-0.3.2-6.fc39.aarch64 87/137 Installing : libyaml-0.2.5-12.fc39.aarch64 88/137 Installing : mpdecimal-2.5.1-7.fc39.aarch64 89/137 Installing : npth-1.6-14.fc39.aarch64 90/137 Installing : libssh-config-0.10.5-2.fc39.noarch 91/137 Installing : libreport-filesystem-2.17.11-3.fc39.noarch 92/137 Installing : dnf-data-4.16.2-2.fc39.noarch 93/137 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : coreutils-common-9.3-2.fc39.aarch64 94/137 Installing : openssl-libs-1:3.1.1-1.fc39.aarch64 95/137 Installing : coreutils-9.3-2.fc39.aarch64 96/137 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 97/137 Installing : ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 97/137 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 97/137 Installing : krb5-libs-1.21-3.fc39.aarch64 98/137 Installing : libtirpc-1.3.3-1.rc2.fc39.aarch64 99/137 Installing : zchunk-libs-1.3.1-2.fc39.aarch64 100/137 Installing : libnsl2-2.0.0-6.fc39.aarch64 101/137 Installing : libssh-0.10.5-2.fc39.aarch64 102/137 Installing : python-pip-wheel-23.2.1-1.fc39.noarch 103/137 Installing : python3-3.12.0~b4-3.fc39.aarch64 104/137 Installing : python3-libs-3.12.0~b4-3.fc39.aarch64 105/137 Installing : python3-libcomps-0.1.19-3.fc39.aarch64 106/137 Installing : python3-dbus-1.3.2-4.fc39.aarch64 107/137 Installing : python3-distro-1.8.0-6.fc39.noarch 108/137 Installing : python3-six-1.16.0-12.fc39.noarch 109/137 Installing : python3-dateutil-1:2.8.2-10.fc39.noarch 110/137 Installing : python3-systemd-235-5.fc39.aarch64 111/137 Installing : libarchive-3.7.1-1.fc39.aarch64 112/137 Installing : libevent-2.1.12-9.fc39.aarch64 113/137 Installing : openldap-2.6.6-1.fc39.aarch64 114/137 Installing : libcurl-8.2.1-1.fc39.aarch64 115/137 Running scriptlet: tpm2-tss-4.0.1-4.fc39.aarch64 116/137 useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Installing : tpm2-tss-4.0.1-4.fc39.aarch64 116/137 Installing : gnupg2-2.4.3-2.fc39.aarch64 117/137 Installing : gpgme-1.20.0-5.fc39.aarch64 118/137 Installing : librepo-1.15.2-1.fc39.aarch64 119/137 Installing : python3-gpg-1.20.0-5.fc39.aarch64 120/137 Installing : ima-evm-utils-1.5-2.fc39.aarch64 121/137 Installing : curl-8.2.1-1.fc39.aarch64 122/137 Installing : libfsverity-1.4-10.fc39.aarch64 123/137 Installing : rpm-sequoia-1.4.1-2.fc39.aarch64 124/137 Installing : rpm-libs-4.18.92-1.fc39.aarch64 125/137 Installing : libmodulemd-2.15.0-5.fc39.aarch64 126/137 Installing : libsolv-0.7.24-8.fc39.aarch64 127/137 Installing : libdnf-0.70.2-1.fc39.aarch64 128/137 Installing : python3-libdnf-0.70.2-1.fc39.aarch64 129/137 Installing : python3-hawkey-0.70.2-1.fc39.aarch64 130/137 Installing : rpm-build-libs-4.18.92-1.fc39.aarch64 131/137 Installing : rpm-sign-libs-4.18.92-1.fc39.aarch64 132/137 Installing : python3-rpm-4.18.92-1.fc39.aarch64 133/137 Installing : python3-dnf-4.16.2-2.fc39.noarch 134/137 Installing : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 135/137 Installing : dnf-plugins-core-4.4.2-1.fc39.noarch 136/137 Running scriptlet: rpm-4.18.92-1.fc39.aarch64 137/137 Installing : rpm-4.18.92-1.fc39.aarch64 137/137 Running scriptlet: filesystem-3.18-6.fc39.aarch64 137/137 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 137/137 Running scriptlet: rpm-4.18.92-1.fc39.aarch64 137/137 Verifying : alternatives-1.25-1.fc39.aarch64 1/137 Verifying : audit-libs-3.1.2-1.fc39.aarch64 2/137 Verifying : basesystem-11-18.fc39.noarch 3/137 Verifying : bash-5.2.15-5.fc39.aarch64 4/137 Verifying : bzip2-libs-1.0.8-16.fc39.aarch64 5/137 Verifying : ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 6/137 Verifying : coreutils-9.3-2.fc39.aarch64 7/137 Verifying : coreutils-common-9.3-2.fc39.aarch64 8/137 Verifying : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 9/137 Verifying : curl-8.2.1-1.fc39.aarch64 10/137 Verifying : cyrus-sasl-lib-2.1.28-11.fc39.aarch64 11/137 Verifying : dbus-libs-1:1.14.8-2.fc39.aarch64 12/137 Verifying : dnf-data-4.16.2-2.fc39.noarch 13/137 Verifying : dnf-plugins-core-4.4.2-1.fc39.noarch 14/137 Verifying : elfutils-default-yama-scope-0.189-4.fc39.noarch 15/137 Verifying : elfutils-libelf-0.189-4.fc39.aarch64 16/137 Verifying : elfutils-libs-0.189-4.fc39.aarch64 17/137 Verifying : expat-2.5.0-3.fc39.aarch64 18/137 Verifying : fedora-gpg-keys-39-0.4.noarch 19/137 Verifying : fedora-release-39-0.21.noarch 20/137 Verifying : fedora-release-common-39-0.21.noarch 21/137 Verifying : fedora-release-identity-basic-39-0.21.noarch 22/137 Verifying : fedora-repos-39-0.4.noarch 23/137 Verifying : fedora-repos-rawhide-39-0.4.noarch 24/137 Verifying : file-libs-5.44-5.fc39.aarch64 25/137 Verifying : filesystem-3.18-6.fc39.aarch64 26/137 Verifying : findutils-1:4.9.0-5.fc39.aarch64 27/137 Verifying : gawk-5.2.2-2.fc39.aarch64 28/137 Verifying : gdbm-libs-1:1.23-4.fc39.aarch64 29/137 Verifying : glib2-2.77.1-1.fc39.aarch64 30/137 Verifying : glibc-2.38-1.fc39.aarch64 31/137 Verifying : glibc-common-2.38-1.fc39.aarch64 32/137 Verifying : glibc-minimal-langpack-2.38-1.fc39.aarch64 33/137 Verifying : gmp-1:6.2.1-5.fc39.aarch64 34/137 Verifying : gnupg2-2.4.3-2.fc39.aarch64 35/137 Verifying : gnutls-3.8.0-7.fc39.aarch64 36/137 Verifying : gpgme-1.20.0-5.fc39.aarch64 37/137 Verifying : grep-3.11-3.fc39.aarch64 38/137 Verifying : ima-evm-utils-1.5-2.fc39.aarch64 39/137 Verifying : json-c-0.16-5.fc39.aarch64 40/137 Verifying : keyutils-libs-1.6.1-7.fc39.aarch64 41/137 Verifying : krb5-libs-1.21-3.fc39.aarch64 42/137 Verifying : libacl-2.3.1-8.fc39.aarch64 43/137 Verifying : libarchive-3.7.1-1.fc39.aarch64 44/137 Verifying : libassuan-2.5.6-2.fc39.aarch64 45/137 Verifying : libattr-2.5.1-8.fc39.aarch64 46/137 Verifying : libb2-0.98.1-9.fc39.aarch64 47/137 Verifying : libblkid-2.39.1-3.fc39.aarch64 48/137 Verifying : libbrotli-1.0.9-13.fc39.aarch64 49/137 Verifying : libcap-2.48-7.fc39.aarch64 50/137 Verifying : libcap-ng-0.8.3-7.fc39.aarch64 51/137 Verifying : libcom_err-1.47.0-2.fc39.aarch64 52/137 Verifying : libcomps-0.1.19-3.fc39.aarch64 53/137 Verifying : libcurl-8.2.1-1.fc39.aarch64 54/137 Verifying : libdnf-0.70.2-1.fc39.aarch64 55/137 Verifying : libeconf-0.4.0-6.fc39.aarch64 56/137 Verifying : libevent-2.1.12-9.fc39.aarch64 57/137 Verifying : libffi-3.4.4-4.fc39.aarch64 58/137 Verifying : libfsverity-1.4-10.fc39.aarch64 59/137 Verifying : libgcc-13.2.1-1.fc39.aarch64 60/137 Verifying : libgcrypt-1.10.2-2.fc39.aarch64 61/137 Verifying : libgomp-13.2.1-1.fc39.aarch64 62/137 Verifying : libgpg-error-1.47-2.fc39.aarch64 63/137 Verifying : libidn2-2.3.4-3.fc39.aarch64 64/137 Verifying : libksba-1.6.4-2.fc39.aarch64 65/137 Verifying : libmodulemd-2.15.0-5.fc39.aarch64 66/137 Verifying : libmount-2.39.1-3.fc39.aarch64 67/137 Verifying : libnghttp2-1.55.1-2.fc39.aarch64 68/137 Verifying : libnsl2-2.0.0-6.fc39.aarch64 69/137 Verifying : libpsl-0.21.2-4.fc39.aarch64 70/137 Verifying : librepo-1.15.2-1.fc39.aarch64 71/137 Verifying : libreport-filesystem-2.17.11-3.fc39.noarch 72/137 Verifying : libselinux-3.5-5.fc39.aarch64 73/137 Verifying : libsemanage-3.5-4.fc39.aarch64 74/137 Verifying : libsepol-3.5-2.fc39.aarch64 75/137 Verifying : libsigsegv-2.14-5.fc39.aarch64 76/137 Verifying : libsmartcols-2.39.1-3.fc39.aarch64 77/137 Verifying : libsolv-0.7.24-8.fc39.aarch64 78/137 Verifying : libssh-0.10.5-2.fc39.aarch64 79/137 Verifying : libssh-config-0.10.5-2.fc39.noarch 80/137 Verifying : libstdc++-13.2.1-1.fc39.aarch64 81/137 Verifying : libtasn1-4.19.0-3.fc39.aarch64 82/137 Verifying : libtirpc-1.3.3-1.rc2.fc39.aarch64 83/137 Verifying : libunistring-1.1-4.fc39.aarch64 84/137 Verifying : libuuid-2.39.1-3.fc39.aarch64 85/137 Verifying : libverto-0.3.2-6.fc39.aarch64 86/137 Verifying : libxcrypt-4.4.36-2.fc39.aarch64 87/137 Verifying : libxml2-2.10.4-3.fc39.aarch64 88/137 Verifying : libyaml-0.2.5-12.fc39.aarch64 89/137 Verifying : libzstd-1.5.5-4.fc39.aarch64 90/137 Verifying : lua-libs-5.4.6-3.fc39.aarch64 91/137 Verifying : lz4-libs-1.9.4-4.fc39.aarch64 92/137 Verifying : mpdecimal-2.5.1-7.fc39.aarch64 93/137 Verifying : mpfr-4.2.0-3.fc39.aarch64 94/137 Verifying : ncurses-base-6.4-6.20230520.fc39.noarch 95/137 Verifying : ncurses-libs-6.4-6.20230520.fc39.aarch64 96/137 Verifying : nettle-3.9.1-2.fc39.aarch64 97/137 Verifying : npth-1.6-14.fc39.aarch64 98/137 Verifying : openldap-2.6.6-1.fc39.aarch64 99/137 Verifying : openssl-libs-1:3.1.1-1.fc39.aarch64 100/137 Verifying : p11-kit-0.25.0-2.fc39.aarch64 101/137 Verifying : p11-kit-trust-0.25.0-2.fc39.aarch64 102/137 Verifying : pcre2-10.42-1.fc39.2.aarch64 103/137 Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 104/137 Verifying : popt-1.19-3.fc39.aarch64 105/137 Verifying : publicsuffix-list-dafsa-20230614-2.fc39.noarch 106/137 Verifying : python-pip-wheel-23.2.1-1.fc39.noarch 107/137 Verifying : python3-3.12.0~b4-3.fc39.aarch64 108/137 Verifying : python3-dateutil-1:2.8.2-10.fc39.noarch 109/137 Verifying : python3-dbus-1.3.2-4.fc39.aarch64 110/137 Verifying : python3-distro-1.8.0-6.fc39.noarch 111/137 Verifying : python3-dnf-4.16.2-2.fc39.noarch 112/137 Verifying : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 113/137 Verifying : python3-gpg-1.20.0-5.fc39.aarch64 114/137 Verifying : python3-hawkey-0.70.2-1.fc39.aarch64 115/137 Verifying : python3-libcomps-0.1.19-3.fc39.aarch64 116/137 Verifying : python3-libdnf-0.70.2-1.fc39.aarch64 117/137 Verifying : python3-libs-3.12.0~b4-3.fc39.aarch64 118/137 Verifying : python3-rpm-4.18.92-1.fc39.aarch64 119/137 Verifying : python3-six-1.16.0-12.fc39.noarch 120/137 Verifying : python3-systemd-235-5.fc39.aarch64 121/137 Verifying : readline-8.2-4.fc39.aarch64 122/137 Verifying : rpm-4.18.92-1.fc39.aarch64 123/137 Verifying : rpm-build-libs-4.18.92-1.fc39.aarch64 124/137 Verifying : rpm-libs-4.18.92-1.fc39.aarch64 125/137 Verifying : rpm-sequoia-1.4.1-2.fc39.aarch64 126/137 Verifying : rpm-sign-libs-4.18.92-1.fc39.aarch64 127/137 Verifying : sed-4.8-14.fc39.aarch64 128/137 Verifying : setup-2.14.4-1.fc39.noarch 129/137 Verifying : shadow-utils-2:4.13-8.fc39.aarch64 130/137 Verifying : sqlite-libs-3.42.0-7.fc39.aarch64 131/137 Verifying : systemd-libs-254-1.fc39.aarch64 132/137 Verifying : tpm2-tss-4.0.1-4.fc39.aarch64 133/137 Verifying : tzdata-2023c-2.fc39.noarch 134/137 Verifying : xz-libs-5.4.4-1.fc39.aarch64 135/137 Verifying : zchunk-libs-1.3.1-2.fc39.aarch64 136/137 Verifying : zlib-1.2.13-4.fc39.aarch64 137/137 Installed products updated. Installed: alternatives-1.25-1.fc39.aarch64 audit-libs-3.1.2-1.fc39.aarch64 basesystem-11-18.fc39.noarch bash-5.2.15-5.fc39.aarch64 bzip2-libs-1.0.8-16.fc39.aarch64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-2.fc39.aarch64 coreutils-common-9.3-2.fc39.aarch64 crypto-policies-20230731-1.git5ed06e0.fc39.noarch curl-8.2.1-1.fc39.aarch64 cyrus-sasl-lib-2.1.28-11.fc39.aarch64 dbus-libs-1:1.14.8-2.fc39.aarch64 dnf-data-4.16.2-2.fc39.noarch dnf-plugins-core-4.4.2-1.fc39.noarch elfutils-default-yama-scope-0.189-4.fc39.noarch elfutils-libelf-0.189-4.fc39.aarch64 elfutils-libs-0.189-4.fc39.aarch64 expat-2.5.0-3.fc39.aarch64 fedora-gpg-keys-39-0.4.noarch fedora-release-39-0.21.noarch fedora-release-common-39-0.21.noarch fedora-release-identity-basic-39-0.21.noarch fedora-repos-39-0.4.noarch fedora-repos-rawhide-39-0.4.noarch file-libs-5.44-5.fc39.aarch64 filesystem-3.18-6.fc39.aarch64 findutils-1:4.9.0-5.fc39.aarch64 gawk-5.2.2-2.fc39.aarch64 gdbm-libs-1:1.23-4.fc39.aarch64 glib2-2.77.1-1.fc39.aarch64 glibc-2.38-1.fc39.aarch64 glibc-common-2.38-1.fc39.aarch64 glibc-minimal-langpack-2.38-1.fc39.aarch64 gmp-1:6.2.1-5.fc39.aarch64 gnupg2-2.4.3-2.fc39.aarch64 gnutls-3.8.0-7.fc39.aarch64 gpgme-1.20.0-5.fc39.aarch64 grep-3.11-3.fc39.aarch64 ima-evm-utils-1.5-2.fc39.aarch64 json-c-0.16-5.fc39.aarch64 keyutils-libs-1.6.1-7.fc39.aarch64 krb5-libs-1.21-3.fc39.aarch64 libacl-2.3.1-8.fc39.aarch64 libarchive-3.7.1-1.fc39.aarch64 libassuan-2.5.6-2.fc39.aarch64 libattr-2.5.1-8.fc39.aarch64 libb2-0.98.1-9.fc39.aarch64 libblkid-2.39.1-3.fc39.aarch64 libbrotli-1.0.9-13.fc39.aarch64 libcap-2.48-7.fc39.aarch64 libcap-ng-0.8.3-7.fc39.aarch64 libcom_err-1.47.0-2.fc39.aarch64 libcomps-0.1.19-3.fc39.aarch64 libcurl-8.2.1-1.fc39.aarch64 libdnf-0.70.2-1.fc39.aarch64 libeconf-0.4.0-6.fc39.aarch64 libevent-2.1.12-9.fc39.aarch64 libffi-3.4.4-4.fc39.aarch64 libfsverity-1.4-10.fc39.aarch64 libgcc-13.2.1-1.fc39.aarch64 libgcrypt-1.10.2-2.fc39.aarch64 libgomp-13.2.1-1.fc39.aarch64 libgpg-error-1.47-2.fc39.aarch64 libidn2-2.3.4-3.fc39.aarch64 libksba-1.6.4-2.fc39.aarch64 libmodulemd-2.15.0-5.fc39.aarch64 libmount-2.39.1-3.fc39.aarch64 libnghttp2-1.55.1-2.fc39.aarch64 libnsl2-2.0.0-6.fc39.aarch64 libpsl-0.21.2-4.fc39.aarch64 librepo-1.15.2-1.fc39.aarch64 libreport-filesystem-2.17.11-3.fc39.noarch libselinux-3.5-5.fc39.aarch64 libsemanage-3.5-4.fc39.aarch64 libsepol-3.5-2.fc39.aarch64 libsigsegv-2.14-5.fc39.aarch64 libsmartcols-2.39.1-3.fc39.aarch64 libsolv-0.7.24-8.fc39.aarch64 libssh-0.10.5-2.fc39.aarch64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-1.fc39.aarch64 libtasn1-4.19.0-3.fc39.aarch64 libtirpc-1.3.3-1.rc2.fc39.aarch64 libunistring-1.1-4.fc39.aarch64 libuuid-2.39.1-3.fc39.aarch64 libverto-0.3.2-6.fc39.aarch64 libxcrypt-4.4.36-2.fc39.aarch64 libxml2-2.10.4-3.fc39.aarch64 libyaml-0.2.5-12.fc39.aarch64 libzstd-1.5.5-4.fc39.aarch64 lua-libs-5.4.6-3.fc39.aarch64 lz4-libs-1.9.4-4.fc39.aarch64 mpdecimal-2.5.1-7.fc39.aarch64 mpfr-4.2.0-3.fc39.aarch64 ncurses-base-6.4-6.20230520.fc39.noarch ncurses-libs-6.4-6.20230520.fc39.aarch64 nettle-3.9.1-2.fc39.aarch64 npth-1.6-14.fc39.aarch64 openldap-2.6.6-1.fc39.aarch64 openssl-libs-1:3.1.1-1.fc39.aarch64 p11-kit-0.25.0-2.fc39.aarch64 p11-kit-trust-0.25.0-2.fc39.aarch64 pcre2-10.42-1.fc39.2.aarch64 pcre2-syntax-10.42-1.fc39.2.noarch popt-1.19-3.fc39.aarch64 publicsuffix-list-dafsa-20230614-2.fc39.noarch python-pip-wheel-23.2.1-1.fc39.noarch python3-3.12.0~b4-3.fc39.aarch64 python3-dateutil-1:2.8.2-10.fc39.noarch python3-dbus-1.3.2-4.fc39.aarch64 python3-distro-1.8.0-6.fc39.noarch python3-dnf-4.16.2-2.fc39.noarch python3-dnf-plugins-core-4.4.2-1.fc39.noarch python3-gpg-1.20.0-5.fc39.aarch64 python3-hawkey-0.70.2-1.fc39.aarch64 python3-libcomps-0.1.19-3.fc39.aarch64 python3-libdnf-0.70.2-1.fc39.aarch64 python3-libs-3.12.0~b4-3.fc39.aarch64 python3-rpm-4.18.92-1.fc39.aarch64 python3-six-1.16.0-12.fc39.noarch python3-systemd-235-5.fc39.aarch64 readline-8.2-4.fc39.aarch64 rpm-4.18.92-1.fc39.aarch64 rpm-build-libs-4.18.92-1.fc39.aarch64 rpm-libs-4.18.92-1.fc39.aarch64 rpm-sequoia-1.4.1-2.fc39.aarch64 rpm-sign-libs-4.18.92-1.fc39.aarch64 sed-4.8-14.fc39.aarch64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.13-8.fc39.aarch64 sqlite-libs-3.42.0-7.fc39.aarch64 systemd-libs-254-1.fc39.aarch64 tpm2-tss-4.0.1-4.fc39.aarch64 tzdata-2023c-2.fc39.noarch xz-libs-5.4.4-1.fc39.aarch64 zchunk-libs-1.3.1-2.fc39.aarch64 zlib-1.2.13-4.fc39.aarch64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1691513207.623559/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (direct choice) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 77 kB/s | 1.5 kB 00:00 Copr repository 192 MB/s | 19 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 173 kB/s | 3.8 kB 00:00 fedora 157 kB/s | 9.1 kB 00:00 Dependencies resolved. ========================================================================================================================================= Package Arch Version Repository Size ========================================================================================================================================= Installing group/module packages: bash 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 280 k lua-libs aarch64 5.4.6-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 131 k lua-srpm-macros noarch 1-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.6 k lz4-libs aarch64 1.9.4-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68 k mpfr aarch64 4.2.0-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 319 k ncurses-base noarch 6.4-6.20230520.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 63 k ncurses-libs aarch64 6.4-6.20230520.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326 k ocaml-srpm-macros noarch 8-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14 k openblas-srpm-macros noarch 2-14.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.5 k openldap aarch64 2.6.6-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 251 k openssl-libs aarch64 1:3.1.1-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 M p11-kit aarch64 0.25.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 466 k p11-kit-trust aarch64 0.25.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 140 k package-notes-srpm-macros noarch 0.5-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11 k pam aarch64 1.5.3-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 521 k pam-libs aarch64 1.5.3-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58 k pcre2 aarch64 10.42-1.fc39.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 219 k pcre2-syntax noarch 10.42-1.fc39.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 143 k perl-srpm-macros noarch 1-51.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.0 k pkgconf aarch64 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 42 k pkgconf-m4 noarch 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14 k pkgconf-pkg-config aarch64 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.6 k popt aarch64 1.19-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 59 k publicsuffix-list-dafsa noarch 20230614-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 57 k pyproject-srpm-macros noarch 1.9.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14 k python-srpm-macros noarch 3.12-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 25 k qt5-srpm-macros noarch 5.15.10-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.3 k qt6-srpm-macros noarch 6.5.2-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.2 k readline aarch64 8.2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 211 k rpm aarch64 4.18.92-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 506 k rpm-build-libs aarch64 4.18.92-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 92 k rpm-libs aarch64 4.18.92-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 305 k rpm-sequoia aarch64 1.4.1-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 827 k rpmautospec-rpm-macros noarch 0.3.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.8 k rust-srpm-macros noarch 24-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12 k setup noarch 2.14.4-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 148 k sqlite-libs aarch64 3.42.0-7.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 677 k systemd-libs aarch64 254-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 665 k tzdata noarch 2023c-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 433 k util-linux-core aarch64 2.39.1-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 476 k xxhash-libs aarch64 0.8.2-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35 k xz-libs aarch64 5.4.4-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106 k zip aarch64 3.0-38.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262 k zlib aarch64 1.2.13-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93 k zstd aarch64 1.5.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 446 k Installing Groups: Buildsystem building group Transaction Summary ========================================================================================================================================= Install 153 Packages Total size: 51 M Installed size: 302 M Downloading Packages: [SKIPPED] gdb-minimal-13.2-7.fc39.aarch64.rpm: Already downloaded [SKIPPED] alternatives-1.25-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-11.fc39.noarch.rpm: Already downloaded [SKIPPED] audit-libs-3.1.2-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] authselect-1.4.2-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.2-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] basesystem-11-18.fc39.noarch.rpm: Already downloaded [SKIPPED] bash-5.2.15-5.fc39.aarch64.rpm: Already downloaded [SKIPPED] binutils-2.40-13.fc39.aarch64.rpm: Already downloaded [SKIPPED] binutils-gold-2.40-13.fc39.aarch64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-16.fc39.aarch64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-16.fc39.aarch64.rpm: Already downloaded [SKIPPED] ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch.rpm: Already downloaded [SKIPPED] coreutils-9.3-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] coreutils-common-9.3-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] cpio-2.14-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] cracklib-2.9.11-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] crypto-policies-20230731-1.git5ed06e0.fc39.noarch.rpm: Already downloaded [SKIPPED] curl-8.2.1-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-11.fc39.aarch64.rpm: Already downloaded [SKIPPED] debugedit-5.0-10.fc39.aarch64.rpm: Already downloaded [SKIPPED] diffutils-3.10-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] dwz-0.15-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] ed-1.19-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-9.fc39.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.189-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.189-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.189-4.fc39.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.189-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] elfutils-libs-0.189-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-39-0.4.noarch.rpm: Already downloaded [SKIPPED] fedora-release-39-0.21.noarch.rpm: Already 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libnghttp2-1.55.1-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] libnsl2-2.0.0-6.fc39.aarch64.rpm: Already downloaded [SKIPPED] libpkgconf-1.9.5-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] libpsl-0.21.2-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] libpwquality-1.4.5-6.fc39.aarch64.rpm: Already downloaded [SKIPPED] libselinux-3.5-5.fc39.aarch64.rpm: Already downloaded [SKIPPED] libsemanage-3.5-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] libsepol-3.5-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] libsigsegv-2.14-5.fc39.aarch64.rpm: Already downloaded [SKIPPED] libsmartcols-2.39.1-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] libssh-0.10.5-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] libssh-config-0.10.5-2.fc39.noarch.rpm: Already downloaded [SKIPPED] libstdc++-13.2.1-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] libtasn1-4.19.0-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] libtirpc-1.3.3-1.rc2.fc39.aarch64.rpm: Already downloaded [SKIPPED] libunistring-1.1-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] libutempter-1.2.1-10.fc39.aarch64.rpm: Already downloaded [SKIPPED] libuuid-2.39.1-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] libverto-0.3.2-6.fc39.aarch64.rpm: Already downloaded [SKIPPED] libxcrypt-4.4.36-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] libxml2-2.10.4-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] libzstd-1.5.5-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] lua-libs-5.4.6-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] lua-srpm-macros-1-9.fc39.noarch.rpm: Already downloaded [SKIPPED] lz4-libs-1.9.4-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] mpfr-4.2.0-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] ncurses-base-6.4-6.20230520.fc39.noarch.rpm: Already downloaded [SKIPPED] ncurses-libs-6.4-6.20230520.fc39.aarch64.rpm: Already downloaded [SKIPPED] ocaml-srpm-macros-8-2.fc39.noarch.rpm: Already downloaded [SKIPPED] openblas-srpm-macros-2-14.fc39.noarch.rpm: Already downloaded [SKIPPED] openldap-2.6.6-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] openssl-libs-3.1.1-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] p11-kit-0.25.0-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] p11-kit-trust-0.25.0-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] package-notes-srpm-macros-0.5-9.fc39.noarch.rpm: Already downloaded [SKIPPED] pam-1.5.3-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] pam-libs-1.5.3-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] patch-2.7.6-22.fc39.aarch64.rpm: Already downloaded [SKIPPED] pcre2-10.42-1.fc39.2.aarch64.rpm: Already downloaded [SKIPPED] pcre2-syntax-10.42-1.fc39.2.noarch.rpm: Already downloaded [SKIPPED] perl-srpm-macros-1-51.fc39.noarch.rpm: Already downloaded [SKIPPED] pkgconf-1.9.5-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] pkgconf-m4-1.9.5-2.fc39.noarch.rpm: Already downloaded [SKIPPED] pkgconf-pkg-config-1.9.5-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] popt-1.19-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] 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[SKIPPED] zstd-1.5.5-4.fc39.aarch64.rpm: Already downloaded Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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openldap-2.6.6-1.fc39.aarch64 108/153 Verifying : openssl-libs-1:3.1.1-1.fc39.aarch64 109/153 Verifying : p11-kit-0.25.0-2.fc39.aarch64 110/153 Verifying : p11-kit-trust-0.25.0-2.fc39.aarch64 111/153 Verifying : package-notes-srpm-macros-0.5-9.fc39.noarch 112/153 Verifying : pam-1.5.3-2.fc39.aarch64 113/153 Verifying : pam-libs-1.5.3-2.fc39.aarch64 114/153 Verifying : patch-2.7.6-22.fc39.aarch64 115/153 Verifying : pcre2-10.42-1.fc39.2.aarch64 116/153 Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 117/153 Verifying : perl-srpm-macros-1-51.fc39.noarch 118/153 Verifying : pkgconf-1.9.5-2.fc39.aarch64 119/153 Verifying : pkgconf-m4-1.9.5-2.fc39.noarch 120/153 Verifying : pkgconf-pkg-config-1.9.5-2.fc39.aarch64 121/153 Verifying : popt-1.19-3.fc39.aarch64 122/153 Verifying : publicsuffix-list-dafsa-20230614-2.fc39.noarch 123/153 Verifying : pyproject-srpm-macros-1.9.0-2.fc39.noarch 124/153 Verifying : python-srpm-macros-3.12-2.fc39.noarch 125/153 Verifying : qt5-srpm-macros-5.15.10-2.fc39.noarch 126/153 Verifying : qt6-srpm-macros-6.5.2-2.fc39.noarch 127/153 Verifying : readline-8.2-4.fc39.aarch64 128/153 Verifying : redhat-rpm-config-262-1.fc39.noarch 129/153 Verifying : rpm-4.18.92-1.fc39.aarch64 130/153 Verifying : rpm-build-4.18.92-1.fc39.aarch64 131/153 Verifying : rpm-build-libs-4.18.92-1.fc39.aarch64 132/153 Verifying : rpm-libs-4.18.92-1.fc39.aarch64 133/153 Verifying : rpm-sequoia-1.4.1-2.fc39.aarch64 134/153 Verifying : rpmautospec-rpm-macros-0.3.5-4.fc39.noarch 135/153 Verifying : rust-srpm-macros-24-3.fc39.noarch 136/153 Verifying : sed-4.8-14.fc39.aarch64 137/153 Verifying : setup-2.14.4-1.fc39.noarch 138/153 Verifying : shadow-utils-2:4.13-8.fc39.aarch64 139/153 Verifying : sqlite-libs-3.42.0-7.fc39.aarch64 140/153 Verifying : systemd-libs-254-1.fc39.aarch64 141/153 Verifying : tar-2:1.35-1.fc39.aarch64 142/153 Verifying : tzdata-2023c-2.fc39.noarch 143/153 Verifying : unzip-6.0-62.fc39.aarch64 144/153 Verifying : util-linux-2.39.1-3.fc39.aarch64 145/153 Verifying : util-linux-core-2.39.1-3.fc39.aarch64 146/153 Verifying : which-2.21-40.fc39.aarch64 147/153 Verifying : xxhash-libs-0.8.2-1.fc39.aarch64 148/153 Verifying : xz-5.4.4-1.fc39.aarch64 149/153 Verifying : xz-libs-5.4.4-1.fc39.aarch64 150/153 Verifying : zip-3.0-38.fc39.aarch64 151/153 Verifying : zlib-1.2.13-4.fc39.aarch64 152/153 Verifying : zstd-1.5.5-4.fc39.aarch64 153/153 Installed: alternatives-1.25-1.fc39.aarch64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-1.fc39.aarch64 authselect-1.4.2-3.fc39.aarch64 authselect-libs-1.4.2-3.fc39.aarch64 basesystem-11-18.fc39.noarch bash-5.2.15-5.fc39.aarch64 binutils-2.40-13.fc39.aarch64 binutils-gold-2.40-13.fc39.aarch64 bzip2-1.0.8-16.fc39.aarch64 bzip2-libs-1.0.8-16.fc39.aarch64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-2.fc39.aarch64 coreutils-common-9.3-2.fc39.aarch64 cpio-2.14-4.fc39.aarch64 cracklib-2.9.11-2.fc39.aarch64 crypto-policies-20230731-1.git5ed06e0.fc39.noarch curl-8.2.1-1.fc39.aarch64 cyrus-sasl-lib-2.1.28-11.fc39.aarch64 debugedit-5.0-10.fc39.aarch64 diffutils-3.10-3.fc39.aarch64 dwz-0.15-3.fc39.aarch64 ed-1.19-4.fc39.aarch64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.189-4.fc39.aarch64 elfutils-debuginfod-client-0.189-4.fc39.aarch64 elfutils-default-yama-scope-0.189-4.fc39.noarch elfutils-libelf-0.189-4.fc39.aarch64 elfutils-libs-0.189-4.fc39.aarch64 fedora-gpg-keys-39-0.4.noarch fedora-release-39-0.21.noarch fedora-release-common-39-0.21.noarch fedora-release-identity-basic-39-0.21.noarch fedora-repos-39-0.4.noarch fedora-repos-rawhide-39-0.4.noarch file-5.44-5.fc39.aarch64 file-libs-5.44-5.fc39.aarch64 filesystem-3.18-6.fc39.aarch64 findutils-1:4.9.0-5.fc39.aarch64 fonts-srpm-macros-1:2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.aarch64 gdb-minimal-13.2-7.fc39.aarch64 gdbm-libs-1:1.23-4.fc39.aarch64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-1.fc39.aarch64 glibc-common-2.38-1.fc39.aarch64 glibc-gconv-extra-2.38-1.fc39.aarch64 glibc-minimal-langpack-2.38-1.fc39.aarch64 gmp-1:6.2.1-5.fc39.aarch64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.2.0-6.fc39.noarch grep-3.11-3.fc39.aarch64 gzip-1.12-6.fc39.aarch64 info-7.0.3-3.fc39.aarch64 jansson-2.13.1-7.fc39.aarch64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.aarch64 krb5-libs-1.21-3.fc39.aarch64 libacl-2.3.1-8.fc39.aarch64 libarchive-3.7.1-1.fc39.aarch64 libattr-2.5.1-8.fc39.aarch64 libblkid-2.39.1-3.fc39.aarch64 libbrotli-1.0.9-13.fc39.aarch64 libcap-2.48-7.fc39.aarch64 libcap-ng-0.8.3-7.fc39.aarch64 libcom_err-1.47.0-2.fc39.aarch64 libcurl-8.2.1-1.fc39.aarch64 libdb-5.3.28-56.fc39.aarch64 libeconf-0.4.0-6.fc39.aarch64 libevent-2.1.12-9.fc39.aarch64 libfdisk-2.39.1-3.fc39.aarch64 libffi-3.4.4-4.fc39.aarch64 libgcc-13.2.1-1.fc39.aarch64 libgomp-13.2.1-1.fc39.aarch64 libidn2-2.3.4-3.fc39.aarch64 libmount-2.39.1-3.fc39.aarch64 libnghttp2-1.55.1-2.fc39.aarch64 libnsl2-2.0.0-6.fc39.aarch64 libpkgconf-1.9.5-2.fc39.aarch64 libpsl-0.21.2-4.fc39.aarch64 libpwquality-1.4.5-6.fc39.aarch64 libselinux-3.5-5.fc39.aarch64 libsemanage-3.5-4.fc39.aarch64 libsepol-3.5-2.fc39.aarch64 libsigsegv-2.14-5.fc39.aarch64 libsmartcols-2.39.1-3.fc39.aarch64 libssh-0.10.5-2.fc39.aarch64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-1.fc39.aarch64 libtasn1-4.19.0-3.fc39.aarch64 libtirpc-1.3.3-1.rc2.fc39.aarch64 libunistring-1.1-4.fc39.aarch64 libutempter-1.2.1-10.fc39.aarch64 libuuid-2.39.1-3.fc39.aarch64 libverto-0.3.2-6.fc39.aarch64 libxcrypt-4.4.36-2.fc39.aarch64 libxml2-2.10.4-3.fc39.aarch64 libzstd-1.5.5-4.fc39.aarch64 lua-libs-5.4.6-3.fc39.aarch64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.aarch64 mpfr-4.2.0-3.fc39.aarch64 ncurses-base-6.4-6.20230520.fc39.noarch ncurses-libs-6.4-6.20230520.fc39.aarch64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.aarch64 openssl-libs-1:3.1.1-1.fc39.aarch64 p11-kit-0.25.0-2.fc39.aarch64 p11-kit-trust-0.25.0-2.fc39.aarch64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-2.fc39.aarch64 pam-libs-1.5.3-2.fc39.aarch64 patch-2.7.6-22.fc39.aarch64 pcre2-10.42-1.fc39.2.aarch64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.aarch64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.aarch64 popt-1.19-3.fc39.aarch64 publicsuffix-list-dafsa-20230614-2.fc39.noarch pyproject-srpm-macros-1.9.0-2.fc39.noarch python-srpm-macros-3.12-2.fc39.noarch qt5-srpm-macros-5.15.10-2.fc39.noarch qt6-srpm-macros-6.5.2-2.fc39.noarch readline-8.2-4.fc39.aarch64 redhat-rpm-config-262-1.fc39.noarch rpm-4.18.92-1.fc39.aarch64 rpm-build-4.18.92-1.fc39.aarch64 rpm-build-libs-4.18.92-1.fc39.aarch64 rpm-libs-4.18.92-1.fc39.aarch64 rpm-sequoia-1.4.1-2.fc39.aarch64 rpmautospec-rpm-macros-0.3.5-4.fc39.noarch rust-srpm-macros-24-3.fc39.noarch sed-4.8-14.fc39.aarch64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.13-8.fc39.aarch64 sqlite-libs-3.42.0-7.fc39.aarch64 systemd-libs-254-1.fc39.aarch64 tar-2:1.35-1.fc39.aarch64 tzdata-2023c-2.fc39.noarch unzip-6.0-62.fc39.aarch64 util-linux-2.39.1-3.fc39.aarch64 util-linux-core-2.39.1-3.fc39.aarch64 which-2.21-40.fc39.aarch64 xxhash-libs-0.8.2-1.fc39.aarch64 xz-5.4.4-1.fc39.aarch64 xz-libs-5.4.4-1.fc39.aarch64 zip-3.0-38.fc39.aarch64 zlib-1.2.13-4.fc39.aarch64 zstd-1.5.5-4.fc39.aarch64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: authselect-1.4.2-3.fc39.aarch64 libffi-3.4.4-4.fc39.aarch64 file-libs-5.44-5.fc39.aarch64 gnat-srpm-macros-6-3.fc39.noarch keyutils-libs-1.6.1-7.fc39.aarch64 libutempter-1.2.1-10.fc39.aarch64 gdbm-libs-1.23-4.fc39.aarch64 tar-1.35-1.fc39.aarch64 ncurses-base-6.4-6.20230520.fc39.noarch xz-libs-5.4.4-1.fc39.aarch64 debugedit-5.0-10.fc39.aarch64 libevent-2.1.12-9.fc39.aarch64 ocaml-srpm-macros-8-2.fc39.noarch pkgconf-1.9.5-2.fc39.aarch64 p11-kit-0.25.0-2.fc39.aarch64 lua-libs-5.4.6-3.fc39.aarch64 openldap-2.6.6-1.fc39.aarch64 gdb-minimal-13.2-7.fc39.aarch64 rpmautospec-rpm-macros-0.3.5-4.fc39.noarch python-srpm-macros-3.12-2.fc39.noarch libtasn1-4.19.0-3.fc39.aarch64 pam-libs-1.5.3-2.fc39.aarch64 elfutils-libelf-0.189-4.fc39.aarch64 crypto-policies-20230731-1.git5ed06e0.fc39.noarch go-srpm-macros-3.2.0-6.fc39.noarch audit-libs-3.1.2-1.fc39.aarch64 libsemanage-3.5-4.fc39.aarch64 bzip2-1.0.8-16.fc39.aarch64 filesystem-3.18-6.fc39.aarch64 fpc-srpm-macros-1.3-8.fc39.noarch libpsl-0.21.2-4.fc39.aarch64 libblkid-2.39.1-3.fc39.aarch64 curl-8.2.1-1.fc39.aarch64 lz4-libs-1.9.4-4.fc39.aarch64 findutils-4.9.0-5.fc39.aarch64 tzdata-2023c-2.fc39.noarch unzip-6.0-62.fc39.aarch64 mpfr-4.2.0-3.fc39.aarch64 gmp-6.2.1-5.fc39.aarch64 util-linux-2.39.1-3.fc39.aarch64 libsigsegv-2.14-5.fc39.aarch64 rpm-sequoia-1.4.1-2.fc39.aarch64 setup-2.14.4-1.fc39.noarch glibc-common-2.38-1.fc39.aarch64 libdb-5.3.28-56.fc39.aarch64 lua-srpm-macros-1-9.fc39.noarch fedora-release-common-39-0.21.noarch libidn2-2.3.4-3.fc39.aarch64 diffutils-3.10-3.fc39.aarch64 alternatives-1.25-1.fc39.aarch64 libarchive-3.7.1-1.fc39.aarch64 fedora-repos-39-0.4.noarch libpwquality-1.4.5-6.fc39.aarch64 pcre2-10.42-1.fc39.2.aarch64 pcre2-syntax-10.42-1.fc39.2.noarch elfutils-default-yama-scope-0.189-4.fc39.noarch libunistring-1.1-4.fc39.aarch64 ghc-srpm-macros-1.6.1-2.fc39.noarch dwz-0.15-3.fc39.aarch64 glibc-minimal-langpack-2.38-1.fc39.aarch64 libfdisk-2.39.1-3.fc39.aarch64 pkgconf-pkg-config-1.9.5-2.fc39.aarch64 sqlite-libs-3.42.0-7.fc39.aarch64 package-notes-srpm-macros-0.5-9.fc39.noarch libeconf-0.4.0-6.fc39.aarch64 libcurl-8.2.1-1.fc39.aarch64 redhat-rpm-config-262-1.fc39.noarch bash-5.2.15-5.fc39.aarch64 grep-3.11-3.fc39.aarch64 libcom_err-1.47.0-2.fc39.aarch64 util-linux-core-2.39.1-3.fc39.aarch64 authselect-libs-1.4.2-3.fc39.aarch64 pkgconf-m4-1.9.5-2.fc39.noarch cpio-2.14-4.fc39.aarch64 qt6-srpm-macros-6.5.2-2.fc39.noarch libattr-2.5.1-8.fc39.aarch64 libsmartcols-2.39.1-3.fc39.aarch64 bzip2-libs-1.0.8-16.fc39.aarch64 openblas-srpm-macros-2-14.fc39.noarch binutils-gold-2.40-13.fc39.aarch64 libbrotli-1.0.9-13.fc39.aarch64 libselinux-3.5-5.fc39.aarch64 pyproject-srpm-macros-1.9.0-2.fc39.noarch efi-srpm-macros-5-9.fc39.noarch fonts-srpm-macros-2.0.5-12.fc39.noarch shadow-utils-4.13-8.fc39.aarch64 glibc-gconv-extra-2.38-1.fc39.aarch64 zlib-1.2.13-4.fc39.aarch64 libmount-2.39.1-3.fc39.aarch64 libtirpc-1.3.3-1.rc2.fc39.aarch64 elfutils-0.189-4.fc39.aarch64 gawk-5.2.2-2.fc39.aarch64 xxhash-libs-0.8.2-1.fc39.aarch64 systemd-libs-254-1.fc39.aarch64 libssh-0.10.5-2.fc39.aarch64 coreutils-9.3-2.fc39.aarch64 rpm-libs-4.18.92-1.fc39.aarch64 libgomp-13.2.1-1.fc39.aarch64 libstdc++-13.2.1-1.fc39.aarch64 zip-3.0-38.fc39.aarch64 libssh-config-0.10.5-2.fc39.noarch ansible-srpm-macros-1-11.fc39.noarch basesystem-11-18.fc39.noarch glibc-2.38-1.fc39.aarch64 file-5.44-5.fc39.aarch64 cyrus-sasl-lib-2.1.28-11.fc39.aarch64 perl-srpm-macros-1-51.fc39.noarch gzip-1.12-6.fc39.aarch64 cracklib-2.9.11-2.fc39.aarch64 kernel-srpm-macros-1.0-20.fc39.noarch libcap-ng-0.8.3-7.fc39.aarch64 which-2.21-40.fc39.aarch64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch jansson-2.13.1-7.fc39.aarch64 rpm-4.18.92-1.fc39.aarch64 readline-8.2-4.fc39.aarch64 libnghttp2-1.55.1-2.fc39.aarch64 libpkgconf-1.9.5-2.fc39.aarch64 libacl-2.3.1-8.fc39.aarch64 fedora-release-identity-basic-39-0.21.noarch qt5-srpm-macros-5.15.10-2.fc39.noarch sed-4.8-14.fc39.aarch64 fedora-repos-rawhide-39-0.4.noarch libnsl2-2.0.0-6.fc39.aarch64 coreutils-common-9.3-2.fc39.aarch64 popt-1.19-3.fc39.aarch64 libxml2-2.10.4-3.fc39.aarch64 rpm-build-libs-4.18.92-1.fc39.aarch64 rpm-build-4.18.92-1.fc39.aarch64 fedora-release-39-0.21.noarch patch-2.7.6-22.fc39.aarch64 fedora-gpg-keys-39-0.4.noarch libsepol-3.5-2.fc39.aarch64 rust-srpm-macros-24-3.fc39.noarch zstd-1.5.5-4.fc39.aarch64 libuuid-2.39.1-3.fc39.aarch64 binutils-2.40-13.fc39.aarch64 p11-kit-trust-0.25.0-2.fc39.aarch64 libverto-0.3.2-6.fc39.aarch64 pam-1.5.3-2.fc39.aarch64 xz-5.4.4-1.fc39.aarch64 libgcc-13.2.1-1.fc39.aarch64 elfutils-debuginfod-client-0.189-4.fc39.aarch64 libzstd-1.5.5-4.fc39.aarch64 openssl-libs-3.1.1-1.fc39.aarch64 elfutils-libs-0.189-4.fc39.aarch64 publicsuffix-list-dafsa-20230614-2.fc39.noarch krb5-libs-1.21-3.fc39.aarch64 libcap-2.48-7.fc39.aarch64 info-7.0.3-3.fc39.aarch64 ncurses-libs-6.4-6.20230520.fc39.aarch64 ed-1.19-4.fc39.aarch64 libxcrypt-4.4.36-2.fc39.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1689724800 Wrote: /builddir/build/SRPMS/ProDy-2.4.0-4.fc39.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1691513207.623559/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-aarch64-1691513207.623559/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-aarch64-1691513207.623559/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-ietgtkxp/ProDy/ProDy.spec) Config(child) 1 minutes 12 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/ProDy-2.4.0-4.fc39.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1691513207.623559 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/ProDy-2.4.0-4.fc39.src.rpm) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1691513207.623559/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1691513207.623559/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1691513207.623559/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (direct choice) Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 58 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 171 kB/s | 3.8 kB 00:00 fedora 31 kB/s | 9.1 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for ProDy-2.4.0-4.fc39.src.rpm Start: build setup for ProDy-2.4.0-4.fc39.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1689724800 Wrote: /builddir/build/SRPMS/ProDy-2.4.0-4.fc39.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 71 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 177 kB/s | 3.8 kB 00:00 fedora 133 kB/s | 9.1 kB 00:00 Dependencies resolved. ================================================================================================================================================ Package Arch Version Repository Size ================================================================================================================================================ Installing: gcc aarch64 13.2.1-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31 M gcc-c++ aarch64 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================================================================================================================================================ Install 183 Packages Total size: 187 M Total download size: 86 M Installed size: 779 M Downloading Packages: [SKIPPED] graphite2-1.3.14-12.fc39.aarch64.rpm: Already downloaded [SKIPPED] libjxl-0.8.2-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] poppler-23.08.0-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] abattis-cantarell-vf-fonts-0.301-10.fc39.noarch.rpm: Already downloaded [SKIPPED] annobin-docs-12.23-1.fc39.noarch.rpm: Already downloaded [SKIPPED] annobin-plugin-gcc-12.23-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] avahi-libs-0.8-24.fc39.aarch64.rpm: Already downloaded [SKIPPED] cairo-1.17.8-5.fc39.aarch64.rpm: Already downloaded [SKIPPED] cairo-gobject-1.17.8-5.fc39.aarch64.rpm: Already downloaded [SKIPPED] cpp-13.2.1-1.fc39.aarch64.rpm: Already downloaded [SKIPPED] crypto-policies-scripts-20230731-1.git5ed06e0.fc39.noarch.rpm: 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openjpeg2-2.5.0-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] pango-1.50.14-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] pixman-0.42.2-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] poppler-data-0.4.11-5.fc39.noarch.rpm: Already downloaded [SKIPPED] python-pip-wheel-23.2.1-1.fc39.noarch.rpm: Already downloaded [SKIPPED] python3-3.12.0~b4-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] python3-cairo-1.24.0-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] python3-libs-3.12.0~b4-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] python3-setuptools-67.7.2-5.fc39.noarch.rpm: Already downloaded [SKIPPED] rav1e-libs-0.6.6-2.fc39.aarch64.rpm: Already downloaded [SKIPPED] rsvg-pixbuf-loader-2.56.90-9.fc39.aarch64.rpm: Already downloaded [SKIPPED] shared-mime-info-2.2-4.fc39.aarch64.rpm: Already downloaded [SKIPPED] svt-av1-libs-1.4.1-3.fc39.aarch64.rpm: Already downloaded [SKIPPED] xml-common-0.6.3-61.fc39.noarch.rpm: Already downloaded (86/183): flexiblas-3.3.1-5.fc39.aarch64.rpm 1.9 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urw-base35-fonts-20200910-18.fc39.no 2.5 MB/s | 10 kB 00:00 (173/183): python3-reportlab-4.0.4-3.fc39.noarc 43 MB/s | 3.2 MB 00:00 (174/183): urw-base35-fonts-common-20200910-18. 2.5 MB/s | 21 kB 00:00 (175/183): urw-base35-gothic-fonts-20200910-18. 64 MB/s | 643 kB 00:00 (176/183): urw-base35-nimbus-mono-ps-fonts-2020 59 MB/s | 795 kB 00:00 (177/183): urw-base35-nimbus-roman-fonts-202009 59 MB/s | 856 kB 00:00 (178/183): urw-base35-nimbus-sans-fonts-2020091 86 MB/s | 1.3 MB 00:00 (179/183): urw-base35-standard-symbols-ps-fonts 7.4 MB/s | 42 kB 00:00 (180/183): urw-base35-z003-fonts-20200910-18.fc 38 MB/s | 276 kB 00:00 (181/183): urw-base35-p052-fonts-20200910-18.fc 85 MB/s | 974 kB 00:00 (182/183): xorg-x11-fonts-ISO8859-1-100dpi-7.5- 76 MB/s | 1.0 MB 00:00 (183/183): wise2-2.4.1-18.fc39.aarch64.rpm 27 MB/s | 940 kB 00:00 -------------------------------------------------------------------------------- Total 142 MB/s | 86 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : libpng-2:1.6.37-15.fc39.aarch64 1/183 Installing : nspr-4.35.0-11.fc39.aarch64 2/183 Installing : libjpeg-turbo-2.1.4-3.fc39.aarch64 3/183 Installing : fonts-filesystem-1:2.0.5-12.fc39.noarch 4/183 Installing : urw-base35-fonts-common-20200910-18.fc39.noarch 5/183 Installing : nss-util-3.92.0-1.fc39.aarch64 6/183 Installing : libwebp-1.3.1-2.fc39.aarch64 7/183 Installing : python-rpm-macros-3.12-2.fc39.noarch 8/183 Installing : openjpeg2-2.5.0-4.fc39.aarch64 9/183 Installing : libmpc-1.3.1-3.fc39.aarch64 10/183 Installing : libgfortran-13.2.1-1.fc39.aarch64 11/183 Installing : lcms2-2.15-2.fc39.aarch64 12/183 Installing : python3-rpm-macros-3.12-2.fc39.noarch 13/183 Installing : dejavu-sans-fonts-2.37-20.fc38.noarch 14/183 Installing : python3-matplotlib-data-fonts-3.7.2-2.fc39.noarc 15/183 Installing : python3-matplotlib-data-3.7.2-2.fc39.noarch 16/183 Installing : tcl-1:8.6.12-5.fc39.aarch64 17/183 Installing : 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58/183 Verifying : harfbuzz-8.1.1-1.fc39.aarch64 59/183 Verifying : highway-1.0.5-1.fc39.aarch64 60/183 Verifying : jbig2dec-libs-0.19-10.fc39.aarch64 61/183 Verifying : jbigkit-libs-2.1-26.fc39.aarch64 62/183 Verifying : kernel-headers-6.5.0-0.rc2.git0.1.fc39.aarch64 63/183 Verifying : lasi-1.1.3-11.fc39.aarch64 64/183 Verifying : lcms2-2.15-2.fc39.aarch64 65/183 Verifying : libICE-1.0.10-11.fc39.aarch64 66/183 Verifying : libSM-1.2.3-13.fc39.aarch64 67/183 Verifying : libX11-1.8.6-2.fc39.aarch64 68/183 Verifying : libX11-common-1.8.6-2.fc39.noarch 69/183 Verifying : libXau-1.0.11-3.fc39.aarch64 70/183 Verifying : libXext-1.3.5-3.fc39.aarch64 71/183 Verifying : libXft-2.3.8-3.fc39.aarch64 72/183 Verifying : libXpm-3.5.15-4.fc39.aarch64 73/183 Verifying : libXrender-0.9.11-3.fc39.aarch64 74/183 Verifying : libXt-1.2.1-5.fc39.aarch64 75/183 Verifying : libaom-3.6.1-2.fc39.aarch64 76/183 Verifying : libasan-13.2.1-1.fc39.aarch64 77/183 Verifying : libatomic-13.2.1-1.fc39.aarch64 78/183 Verifying : libavif-0.11.1-11.fc39.aarch64 79/183 Verifying : libb2-0.98.1-9.fc39.aarch64 80/183 Verifying : libdatrie-0.2.13-7.fc39.aarch64 81/183 Verifying : libdav1d-1.2.1-2.fc39.aarch64 82/183 Verifying : libfontenc-1.1.6-3.fc39.aarch64 83/183 Verifying : libgfortran-13.2.1-1.fc39.aarch64 84/183 Verifying : libgs-10.01.2-3.fc39.aarch64 85/183 Verifying : libijs-0.35-19.fc39.aarch64 86/183 Verifying : libimagequant-4.0.1-5.fc39.aarch64 87/183 Verifying : libjpeg-turbo-2.1.4-3.fc39.aarch64 88/183 Verifying : libmpc-1.3.1-3.fc39.aarch64 89/183 Verifying : libpaper-1:2.1.1-1.fc39.aarch64 90/183 Verifying : libpng-2:1.6.37-15.fc39.aarch64 91/183 Verifying : libpq-15.3-1.fc39.aarch64 92/183 Verifying : libqhull_r-1:7.2.1-13.fc39.aarch64 93/183 Verifying : libraqm-0.8.0-5.fc39.aarch64 94/183 Verifying : librsvg2-2.56.90-9.fc39.aarch64 95/183 Verifying : libstdc++-devel-13.2.1-1.fc39.aarch64 96/183 Verifying : libthai-0.1.29-6.fc39.aarch64 97/183 Verifying : libtiff-4.4.0-7.fc39.aarch64 98/183 Verifying : libtool-ltdl-2.4.7-7.fc39.aarch64 99/183 Verifying : libubsan-13.2.1-1.fc39.aarch64 100/183 Verifying : libwebp-1.3.1-2.fc39.aarch64 101/183 Verifying : libxcb-1.13.1-12.fc39.aarch64 102/183 Verifying : libxcrypt-devel-4.4.36-2.fc39.aarch64 103/183 Verifying : libxslt-1.1.38-3.fc39.aarch64 104/183 Verifying : m4-1.4.19-6.fc39.aarch64 105/183 Verifying : make-1:4.4.1-2.fc39.aarch64 106/183 Verifying : mariadb-connector-c-3.3.5-2.fc39.aarch64 107/183 Verifying : mariadb-connector-c-config-3.3.5-2.fc39.noarch 108/183 Verifying : mkfontscale-1.2.2-4.fc39.aarch64 109/183 Verifying : mpdecimal-2.5.1-7.fc39.aarch64 110/183 Verifying : mysql-connector-python3-8.0.21-10.fc39.noarch 111/183 Verifying : netpbm-11.02.00-2.fc39.aarch64 112/183 Verifying : nettle-3.9.1-2.fc39.aarch64 113/183 Verifying : nspr-4.35.0-11.fc39.aarch64 114/183 Verifying : nss-3.92.0-1.fc39.aarch64 115/183 Verifying : nss-softokn-3.92.0-1.fc39.aarch64 116/183 Verifying : nss-softokn-freebl-3.92.0-1.fc39.aarch64 117/183 Verifying : nss-sysinit-3.92.0-1.fc39.aarch64 118/183 Verifying : nss-util-3.92.0-1.fc39.aarch64 119/183 Verifying : openjpeg2-2.5.0-4.fc39.aarch64 120/183 Verifying : pango-1.50.14-2.fc39.aarch64 121/183 Verifying : pixman-0.42.2-2.fc39.aarch64 122/183 Verifying : poppler-data-0.4.11-5.fc39.noarch 123/183 Verifying : protobuf-3.19.6-6.fc39.aarch64 124/183 Verifying : pyproject-rpm-macros-1.9.0-2.fc39.noarch 125/183 Verifying : python-pip-wheel-23.2.1-1.fc39.noarch 126/183 Verifying : python-rpm-macros-3.12-2.fc39.noarch 127/183 Verifying : python3-3.12.0~b4-3.fc39.aarch64 128/183 Verifying : python3-appdirs-1.4.4-11.fc39.noarch 129/183 Verifying : python3-brotli-1.0.9-13.fc39.aarch64 130/183 Verifying : python3-cairo-1.24.0-2.fc39.aarch64 131/183 Verifying : python3-charset-normalizer-3.2.0-2.fc39.noarch 132/183 Verifying : python3-cycler-0.11.0-9.fc39.noarch 133/183 Verifying : python3-dateutil-1:2.8.2-10.fc39.noarch 134/183 Verifying : python3-devel-3.12.0~b4-3.fc39.aarch64 135/183 Verifying : python3-fs-2.4.16-5.fc39.noarch 136/183 Verifying : python3-idna-3.4-4.fc39.noarch 137/183 Verifying : python3-isodate-0.6.1-9.fc39.noarch 138/183 Verifying : python3-kiwisolver-1.4.4-9.fc39.aarch64 139/183 Verifying : python3-libs-3.12.0~b4-3.fc39.aarch64 140/183 Verifying : python3-lxml-4.9.3-2.fc39.aarch64 141/183 Verifying : python3-munkres-1.1.2-16.fc39.noarch 142/183 Verifying : python3-mysqlclient-2.1.1-5.fc39.aarch64 143/183 Verifying : python3-networkx-3.1-4.fc39~bootstrap.noarch 144/183 Verifying : python3-nose-1.3.7-42.fc39.noarch 145/183 Verifying : python3-olefile-0.46-21.fc39.noarch 146/183 Verifying : python3-packaging-23.1-4.fc39.noarch 147/183 Verifying : python3-pooch-1.5.2-12.fc39.noarch 148/183 Verifying : python3-protobuf-3.19.6-6.fc39.aarch64 149/183 Verifying : python3-psycopg2-2.9.6-3.fc39.aarch64 150/183 Verifying : python3-pyparsing-3.0.9-11.fc39.noarch 151/183 Verifying : python3-pysocks-1.7.1-20.fc39.noarch 152/183 Verifying : python3-rdflib-6.2.0-4.fc39.noarch 153/183 Verifying : python3-reportlab-4.0.4-3.fc39.noarch 154/183 Verifying : python3-requests-2.28.2-5.fc39.noarch 155/183 Verifying : python3-rpm-generators-14-7.fc39.noarch 156/183 Verifying : python3-rpm-macros-3.12-2.fc39.noarch 157/183 Verifying : python3-setuptools-67.7.2-5.fc39.noarch 158/183 Verifying : python3-six-1.16.0-12.fc39.noarch 159/183 Verifying : python3-tkinter-3.12.0~b4-3.fc39.aarch64 160/183 Verifying : python3-urllib3+socks-1.26.16-2.fc39.noarch 161/183 Verifying : python3-urllib3-1.26.16-2.fc39.noarch 162/183 Verifying : rav1e-libs-0.6.6-2.fc39.aarch64 163/183 Verifying : rsvg-pixbuf-loader-2.56.90-9.fc39.aarch64 164/183 Verifying : shared-mime-info-2.2-4.fc39.aarch64 165/183 Verifying : svt-av1-libs-1.4.1-3.fc39.aarch64 166/183 Verifying : tcl-1:8.6.12-5.fc39.aarch64 167/183 Verifying : tk-1:8.6.12-5.fc39.aarch64 168/183 Verifying : urw-base35-bookman-fonts-20200910-18.fc39.noarch 169/183 Verifying : urw-base35-c059-fonts-20200910-18.fc39.noarch 170/183 Verifying : urw-base35-d050000l-fonts-20200910-18.fc39.noarc 171/183 Verifying : urw-base35-fonts-20200910-18.fc39.noarch 172/183 Verifying : urw-base35-fonts-common-20200910-18.fc39.noarch 173/183 Verifying : urw-base35-gothic-fonts-20200910-18.fc39.noarch 174/183 Verifying : urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39 175/183 Verifying : urw-base35-nimbus-roman-fonts-20200910-18.fc39.n 176/183 Verifying : urw-base35-nimbus-sans-fonts-20200910-18.fc39.no 177/183 Verifying : urw-base35-p052-fonts-20200910-18.fc39.noarch 178/183 Verifying : urw-base35-standard-symbols-ps-fonts-20200910-18 179/183 Verifying : urw-base35-z003-fonts-20200910-18.fc39.noarch 180/183 Verifying : wise2-2.4.1-18.fc39.aarch64 181/183 Verifying : xml-common-0.6.3-61.fc39.noarch 182/183 Verifying : xorg-x11-fonts-ISO8859-1-100dpi-7.5-36.fc39.noar 183/183 Installed: abattis-cantarell-vf-fonts-0.301-10.fc39.noarch adobe-mappings-cmap-20230622-1.fc39.noarch adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch adobe-mappings-pdf-20190401-5.fc39.noarch annobin-docs-12.23-1.fc39.noarch annobin-plugin-gcc-12.23-1.fc39.aarch64 avahi-libs-0.8-24.fc39.aarch64 cairo-1.17.8-5.fc39.aarch64 cairo-gobject-1.17.8-5.fc39.aarch64 cpp-13.2.1-1.fc39.aarch64 crypto-policies-scripts-20230731-1.git5ed06e0.fc39.noarch cups-libs-1:2.4.6-2.fc39.aarch64 dbus-libs-1:1.14.8-2.fc39.aarch64 default-fonts-core-sans-4.0-6.fc39.noarch dejavu-sans-fonts-2.37-20.fc38.noarch expat-2.5.0-3.fc39.aarch64 flex-2.6.4-13.fc39.aarch64 flexiblas-3.3.1-5.fc39.aarch64 flexiblas-netlib-3.3.1-5.fc39.aarch64 flexiblas-openblas-openmp-3.3.1-5.fc39.aarch64 fontconfig-2.14.2-4.fc39.aarch64 fonts-filesystem-1:2.0.5-12.fc39.noarch freetype-2.13.1-2.fc39.aarch64 fribidi-1.0.13-2.fc39.aarch64 gc-8.2.2-4.fc39.aarch64 gcc-13.2.1-1.fc39.aarch64 gcc-c++-13.2.1-1.fc39.aarch64 gcc-plugin-annobin-13.2.1-1.fc39.aarch64 gd-2.3.3-12.fc39.aarch64 gdk-pixbuf2-2.42.10-5.fc39.aarch64 glib2-2.77.1-1.fc39.aarch64 glibc-devel-2.38-1.fc39.aarch64 gnutls-3.8.0-7.fc39.aarch64 google-droid-sans-fonts-20200215-15.fc39.noarch google-noto-fonts-common-20230801-1.fc39.noarch google-noto-sans-vf-fonts-20230801-1.fc39.noarch graphite2-1.3.14-12.fc39.aarch64 graphviz-8.1.0-5.fc39.aarch64 gts-0.7.6-46.20121130.fc39.aarch64 guile22-2.2.7-9.fc39.aarch64 harfbuzz-8.1.1-1.fc39.aarch64 highway-1.0.5-1.fc39.aarch64 jbig2dec-libs-0.19-10.fc39.aarch64 jbigkit-libs-2.1-26.fc39.aarch64 kernel-headers-6.5.0-0.rc2.git0.1.fc39.aarch64 lasi-1.1.3-11.fc39.aarch64 lcms2-2.15-2.fc39.aarch64 libICE-1.0.10-11.fc39.aarch64 libSM-1.2.3-13.fc39.aarch64 libX11-1.8.6-2.fc39.aarch64 libX11-common-1.8.6-2.fc39.noarch libXau-1.0.11-3.fc39.aarch64 libXext-1.3.5-3.fc39.aarch64 libXft-2.3.8-3.fc39.aarch64 libXpm-3.5.15-4.fc39.aarch64 libXrender-0.9.11-3.fc39.aarch64 libXt-1.2.1-5.fc39.aarch64 libaom-3.6.1-2.fc39.aarch64 libasan-13.2.1-1.fc39.aarch64 libatomic-13.2.1-1.fc39.aarch64 libavif-0.11.1-11.fc39.aarch64 libb2-0.98.1-9.fc39.aarch64 libdatrie-0.2.13-7.fc39.aarch64 libdav1d-1.2.1-2.fc39.aarch64 libfontenc-1.1.6-3.fc39.aarch64 libgfortran-13.2.1-1.fc39.aarch64 libgs-10.01.2-3.fc39.aarch64 libijs-0.35-19.fc39.aarch64 libimagequant-4.0.1-5.fc39.aarch64 libjpeg-turbo-2.1.4-3.fc39.aarch64 libjxl-1:0.8.2-2.fc39.aarch64 libmpc-1.3.1-3.fc39.aarch64 libpaper-1:2.1.1-1.fc39.aarch64 libpng-2:1.6.37-15.fc39.aarch64 libpq-15.3-1.fc39.aarch64 libqhull_r-1:7.2.1-13.fc39.aarch64 libraqm-0.8.0-5.fc39.aarch64 librsvg2-2.56.90-9.fc39.aarch64 libstdc++-devel-13.2.1-1.fc39.aarch64 libthai-0.1.29-6.fc39.aarch64 libtiff-4.4.0-7.fc39.aarch64 libtool-ltdl-2.4.7-7.fc39.aarch64 libubsan-13.2.1-1.fc39.aarch64 libwebp-1.3.1-2.fc39.aarch64 libxcb-1.13.1-12.fc39.aarch64 libxcrypt-devel-4.4.36-2.fc39.aarch64 libxslt-1.1.38-3.fc39.aarch64 m4-1.4.19-6.fc39.aarch64 make-1:4.4.1-2.fc39.aarch64 mariadb-connector-c-3.3.5-2.fc39.aarch64 mariadb-connector-c-config-3.3.5-2.fc39.noarch mkfontscale-1.2.2-4.fc39.aarch64 mpdecimal-2.5.1-7.fc39.aarch64 mysql-connector-python3-8.0.21-10.fc39.noarch netpbm-11.02.00-2.fc39.aarch64 nettle-3.9.1-2.fc39.aarch64 nspr-4.35.0-11.fc39.aarch64 nss-3.92.0-1.fc39.aarch64 nss-softokn-3.92.0-1.fc39.aarch64 nss-softokn-freebl-3.92.0-1.fc39.aarch64 nss-sysinit-3.92.0-1.fc39.aarch64 nss-util-3.92.0-1.fc39.aarch64 openblas-0.3.23-1.fc39.aarch64 openblas-openmp-0.3.23-1.fc39.aarch64 openjpeg2-2.5.0-4.fc39.aarch64 pango-1.50.14-2.fc39.aarch64 pixman-0.42.2-2.fc39.aarch64 poppler-23.08.0-1.fc39.aarch64 poppler-data-0.4.11-5.fc39.noarch poppler-glib-23.08.0-1.fc39.aarch64 protobuf-3.19.6-6.fc39.aarch64 pyproject-rpm-macros-1.9.0-2.fc39.noarch python-pip-wheel-23.2.1-1.fc39.noarch python-rpm-macros-3.12-2.fc39.noarch python3-3.12.0~b4-3.fc39.aarch64 python3-appdirs-1.4.4-11.fc39.noarch python3-biopython-1.81-4.fc39.aarch64 python3-brotli-1.0.9-13.fc39.aarch64 python3-cairo-1.24.0-2.fc39.aarch64 python3-charset-normalizer-3.2.0-2.fc39.noarch python3-contourpy-1.1.0-2.fc39.aarch64 python3-cycler-0.11.0-9.fc39.noarch python3-dateutil-1:2.8.2-10.fc39.noarch python3-devel-3.12.0~b4-3.fc39.aarch64 python3-fonttools-4.42.0-1.fc39.aarch64 python3-fs-2.4.16-5.fc39.noarch python3-idna-3.4-4.fc39.noarch python3-isodate-0.6.1-9.fc39.noarch python3-kiwisolver-1.4.4-9.fc39.aarch64 python3-libs-3.12.0~b4-3.fc39.aarch64 python3-lxml-4.9.3-2.fc39.aarch64 python3-matplotlib-3.7.2-2.fc39.aarch64 python3-matplotlib-data-3.7.2-2.fc39.noarch python3-matplotlib-data-fonts-3.7.2-2.fc39.noarch python3-matplotlib-tk-3.7.2-2.fc39.aarch64 python3-munkres-1.1.2-16.fc39.noarch python3-mysqlclient-2.1.1-5.fc39.aarch64 python3-networkx-3.1-4.fc39~bootstrap.noarch python3-nose-1.3.7-42.fc39.noarch python3-numpy-1:1.24.4-2.fc39.aarch64 python3-numpy-f2py-1:1.24.4-2.fc39.aarch64 python3-olefile-0.46-21.fc39.noarch python3-packaging-23.1-4.fc39.noarch python3-pillow-10.0.0-2.fc39.aarch64 python3-pillow-tk-10.0.0-2.fc39.aarch64 python3-pooch-1.5.2-12.fc39.noarch python3-protobuf-3.19.6-6.fc39.aarch64 python3-psycopg2-2.9.6-3.fc39.aarch64 python3-pygraphviz-1.11-3.fc39.aarch64 python3-pyparsing-3.0.9-11.fc39.noarch python3-pysocks-1.7.1-20.fc39.noarch python3-rdflib-6.2.0-4.fc39.noarch python3-reportlab-4.0.4-3.fc39.noarch python3-requests-2.28.2-5.fc39.noarch python3-rpm-generators-14-7.fc39.noarch python3-rpm-macros-3.12-2.fc39.noarch python3-scipy-1.11.1-1.fc39.aarch64 python3-setuptools-67.7.2-5.fc39.noarch python3-six-1.16.0-12.fc39.noarch python3-tkinter-3.12.0~b4-3.fc39.aarch64 python3-urllib3-1.26.16-2.fc39.noarch python3-urllib3+socks-1.26.16-2.fc39.noarch rav1e-libs-0.6.6-2.fc39.aarch64 rsvg-pixbuf-loader-2.56.90-9.fc39.aarch64 shared-mime-info-2.2-4.fc39.aarch64 svt-av1-libs-1.4.1-3.fc39.aarch64 tcl-1:8.6.12-5.fc39.aarch64 tk-1:8.6.12-5.fc39.aarch64 urw-base35-bookman-fonts-20200910-18.fc39.noarch urw-base35-c059-fonts-20200910-18.fc39.noarch urw-base35-d050000l-fonts-20200910-18.fc39.noarch urw-base35-fonts-20200910-18.fc39.noarch urw-base35-fonts-common-20200910-18.fc39.noarch urw-base35-gothic-fonts-20200910-18.fc39.noarch urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch urw-base35-p052-fonts-20200910-18.fc39.noarch urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch urw-base35-z003-fonts-20200910-18.fc39.noarch wise2-2.4.1-18.fc39.aarch64 xml-common-0.6.3-61.fc39.noarch xorg-x11-fonts-ISO8859-1-100dpi-7.5-36.fc39.noarch Complete! Finish: build setup for ProDy-2.4.0-4.fc39.src.rpm Start: rpmbuild ProDy-2.4.0-4.fc39.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1689724800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.YnZYPZ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf ProDy-2.4.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/ProDy-2.4.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd ProDy-2.4.0 + rm -rf /builddir/build/BUILD/ProDy-2.4.0-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/ProDy-2.4.0-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/ProDy-change_requires.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + find prody/proteins/ccealign -name '*.h' -exec chmod 0644 '{}' ';' + find prody/proteins/ccealign -name '*.cpp' -exec chmod 0644 '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.psCc0w + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' running build running build_py creating build creating build/lib.linux-aarch64-cpython-312 creating build/lib.linux-aarch64-cpython-312/prody copying prody/__init__.py -> build/lib.linux-aarch64-cpython-312/prody creating build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/subset.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/selection.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/select.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/segment.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/residue.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/pointer.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/nbexclusion.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/improper.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/hierview.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/functions.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/flags.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/fields.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/donor.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/dihedral.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/crossterm.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/chain.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/bond.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/atommap.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/atomic.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/atomgroup.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/atom.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/angle.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/acceptor.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/atomic creating build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/uniprot.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/quartataweb.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/pfam.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/goa.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/dali.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/cath.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/database creating build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/vmdfile.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/signature.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/sampling.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/rtb.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/plotting.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/perturb.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/pca.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/nmdfile.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/nma.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/modeset.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/mode.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/mechstiff.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/imanm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/heatmapper.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/gnm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/gamma.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/functions.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/exgnm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/exanm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/essa.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/entropy.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/editing.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/compare.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/clustenm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/bbenm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/anm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/analysis.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/adaptive.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics creating build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/pdbensemble.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/functions.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/ensemble.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/conformation.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble creating build/lib.linux-aarch64-cpython-312/prody/kdtree copying prody/kdtree/kdtree.py -> build/lib.linux-aarch64-cpython-312/prody/kdtree copying prody/kdtree/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/kdtree creating build/lib.linux-aarch64-cpython-312/prody/measure copying prody/measure/transform.py -> build/lib.linux-aarch64-cpython-312/prody/measure copying prody/measure/measure.py -> build/lib.linux-aarch64-cpython-312/prody/measure copying prody/measure/contacts.py -> build/lib.linux-aarch64-cpython-312/prody/measure copying prody/measure/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/measure creating build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/wwpdb.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/stride.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/starfile.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/pdbfile.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/pdbclusters.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/localpdb.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/header.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/functions.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/emdfile.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/dssp.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/compare.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/cifheader.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/ciffile.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/blastpdb.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/proteins creating build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/sequence.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/plotting.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/msafile.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/msa.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/analysis.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/sequence creating build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/trajfile.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/trajectory.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/trajbase.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/psffile.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/frame.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/dcdfile.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory creating build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/straw.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/norm.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/hic.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/functions.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/cluster.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin creating build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/pdbligands.py -> build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/functions.py -> build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/ccd.py -> build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/bird.py -> build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/compounds creating build/lib.linux-aarch64-cpython-312/prody/domain_decomposition copying prody/domain_decomposition/spectrus.py -> build/lib.linux-aarch64-cpython-312/prody/domain_decomposition copying prody/domain_decomposition/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/domain_decomposition creating build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/settings.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/seqtools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/pathtools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/misctools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/logger.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/legacy.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/laptools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/eigtools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/drawtools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/doctools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/checkers.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/catchall.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/TreeConstruction.py -> build/lib.linux-aarch64-cpython-312/prody/utilities creating build/lib.linux-aarch64-cpython-312/prody/apps copying prody/apps/apptools.py -> build/lib.linux-aarch64-cpython-312/prody/apps copying prody/apps/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/apps creating build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_energy.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps creating build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps creating build/lib.linux-aarch64-cpython-312/prody/tests copying prody/tests/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests creating build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps creating build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_select.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic creating build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles creating build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/test_signature.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/test_pca.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics creating build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble creating build/lib.linux-aarch64-cpython-312/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> build/lib.linux-aarch64-cpython-312/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/kdtree creating build/lib.linux-aarch64-cpython-312/prody/tests/measure copying prody/tests/measure/test_transform.py -> build/lib.linux-aarch64-cpython-312/prody/tests/measure copying prody/tests/measure/test_measure.py -> build/lib.linux-aarch64-cpython-312/prody/tests/measure copying prody/tests/measure/test_contacts.py -> build/lib.linux-aarch64-cpython-312/prody/tests/measure copying prody/tests/measure/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/measure creating build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_header.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_ciffile.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins creating build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence creating build/lib.linux-aarch64-cpython-312/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> build/lib.linux-aarch64-cpython-312/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> build/lib.linux-aarch64-cpython-312/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/trajectory creating build/lib.linux-aarch64-cpython-312/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> build/lib.linux-aarch64-cpython-312/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> build/lib.linux-aarch64-cpython-312/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> build/lib.linux-aarch64-cpython-312/prody/tests/utilities copying prody/tests/utilities/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/utilities creating build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles copying prody/utilities/datafiles/saxs_water.dat -> build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles copying prody/utilities/datafiles/mod_res_map.dat -> build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb3p3w.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb3o21.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb3hsy.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb2nwl-opm.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_ca.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_vectors.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_evalues.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/hit1ubi.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_vectors.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_evalues.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/commute1ubi.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_cov.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_hessian.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6zu5.cif -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6yfy.cif -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build/temp.linux-aarch64-cpython-312 creating build/temp.linux-aarch64-cpython-312/prody creating build/temp.linux-aarch64-cpython-312/prody/dynamics gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/dynamics/rtbtools.c -o build/temp.linux-aarch64-cpython-312/prody/dynamics/rtbtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/dynamics/rtbtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/dynamics/rtbtools.cpython-312-aarch64-linux-gnu.so building 'prody.dynamics.smtools' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/dynamics/smtools.c -o build/temp.linux-aarch64-cpython-312/prody/dynamics/smtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/dynamics/smtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/dynamics/smtools.cpython-312-aarch64-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-aarch64-cpython-312/prody/sequence gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/sequence/msatools.c -o build/temp.linux-aarch64-cpython-312/prody/sequence/msatools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/sequence/msatools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/sequence/msatools.cpython-312-aarch64-linux-gnu.so building 'prody.sequence.msaio' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/sequence/msaio.c -o build/temp.linux-aarch64-cpython-312/prody/sequence/msaio.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/sequence/msaio.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/sequence/msaio.cpython-312-aarch64-linux-gnu.so building 'prody.sequence.seqtools' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/sequence/seqtools.c -o build/temp.linux-aarch64-cpython-312/prody/sequence/seqtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/sequence/seqtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/sequence/seqtools.cpython-312-aarch64-linux-gnu.so building 'prody.kdtree._CKDTree' extension creating build/temp.linux-aarch64-cpython-312/prody/kdtree gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/kdtree/KDTree.c -o build/temp.linux-aarch64-cpython-312/prody/kdtree/KDTree.o gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/kdtree/KDTreemodule.c -o build/temp.linux-aarch64-cpython-312/prody/kdtree/KDTreemodule.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/kdtree/KDTree.o build/temp.linux-aarch64-cpython-312/prody/kdtree/KDTreemodule.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/kdtree/_CKDTree.cpython-312-aarch64-linux-gnu.so building 'prody.proteins.ccealign' extension creating build/temp.linux-aarch64-cpython-312/prody/proteins creating build/temp.linux-aarch64-cpython-312/prody/proteins/ccealign gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Iprody/utilities/tnt -I/usr/include/python3.12 -c prody/proteins/ccealign/ccealignmodule.cpp -o build/temp.linux-aarch64-cpython-312/prody/proteins/ccealign/ccealignmodule.o In file included from prody/utilities/tnt/tnt.h:41, from prody/proteins/ccealign/ccealignmodule.h:43, from prody/proteins/ccealign/ccealignmodule.cpp:38: In member function ‘TNT::Array1D::set_(double*, double*, double const&)’, inlined from ‘TNT::Array1D::Array1D(int, double const&)’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest(cePoint*, cePoint*, afp**, int, int, int)’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ~~~^~~ g++ -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/proteins/ccealign/ccealignmodule.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/proteins/ccealign.cpython-312-aarch64-linux-gnu.so In member function ‘set_’, inlined from ‘__ct ’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘__builtin_memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ^ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.wklaiN + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 ++ dirname /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 --prefix /usr running install /usr/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer, pypa/build or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() running install_lib creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64 creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12 creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-312/prody/tests/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-312/prody/tests/utilities/test_checkers.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-312/prody/tests/utilities/test_misctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-312/prody/tests/utilities/test_pathtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-312/prody/tests/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-312/prody/tests/trajectory/test_dcdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-312/prody/tests/trajectory/test_frame.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/test_analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/test_msa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/test_msafile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/test_sequence.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_ciffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_dssp.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_header.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_localpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_pdbfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_wwpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-312/prody/tests/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-312/prody/tests/measure/test_contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-312/prody/tests/measure/test_measure.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-312/prody/tests/measure/test_transform.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree copying build/lib.linux-aarch64-cpython-312/prody/tests/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree copying build/lib.linux-aarch64-cpython-312/prody/tests/kdtree/test_kdtree.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/test_conformation.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/test_ensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/test_functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/test_pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/test_editing.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/test_enms.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/test_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/test_signature.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/mmcif_6yfy.cif -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/mmcif_6zu5.cif -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot.fasta -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot.slx -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot.sth -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/xmlSTI.xml -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/dcd2k39_truncated.dcd -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/anm1ubi_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/exanm2nwl_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pca2k39_cov.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/rtb2gb1_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/rtb2gb1_project.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/anm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/anm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/commute1ubi.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/exanm2nwl_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/exanm2nwl_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/gnm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/gnm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/hit1ubi.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot_di.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot_sca.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pca2k39_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pca2k39_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1ejg.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1r19_dssp.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1ubi.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1ubi_ca.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb2gb1_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb2k39_ca.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb2k39_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb2nwl-opm.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb3hsy.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb3mht.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb3o21.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb3p3w.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdbRTER.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_atomic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_atommap.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_fragment.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_hierview.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_subset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_examples.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_coevol.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_conserv.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_fetch.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_filter.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_merge.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_occupancy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_rankorder.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_refine.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_search.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/nmaoptions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_align.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_biomol.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_blast.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_eda.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_energy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_fetch.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps copying build/lib.linux-aarch64-cpython-312/prody/apps/apptools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles/mod_res_map.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles/saxs_water.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-312/prody/utilities/TreeConstruction.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/catchall.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/checkers.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/doctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/drawtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/eigtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/laptools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/legacy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/logger.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/misctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/pathtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/seqtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/settings.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition copying build/lib.linux-aarch64-cpython-312/prody/domain_decomposition/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition copying build/lib.linux-aarch64-cpython-312/prody/domain_decomposition/spectrus.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/bird.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/ccd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/pdbligands.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/cluster.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/hic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/norm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/straw.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/dcdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/frame.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/psffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/trajbase.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/trajectory.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/trajfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/seqtools.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/msaio.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/msatools.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/msa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/msafile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/plotting.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/sequence.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/ccealign.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/blastpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/ciffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/cifheader.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/compare.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/dssp.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/emdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/header.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/localpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/pdbclusters.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/pdbfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/starfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/stride.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/wwpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-312/prody/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-312/prody/measure/contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-312/prody/measure/measure.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-312/prody/measure/transform.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-312/prody/kdtree/_CKDTree.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-312/prody/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-312/prody/kdtree/kdtree.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/conformation.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/ensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/smtools.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/rtbtools.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/adaptive.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/bbenm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/clustenm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/compare.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/editing.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/entropy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/essa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/exanm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/exgnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/gamma.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/heatmapper.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/imanm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/mechstiff.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/mode.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/modeset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/nma.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/nmdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/perturb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/plotting.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/rtb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/sampling.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/signature.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/vmdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/cath.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/dali.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/goa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/pfam.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/quartataweb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/uniprot.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/acceptor.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/angle.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/atom.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/atomgroup.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/atomic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/atommap.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/bond.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/chain.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/crossterm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/dihedral.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/donor.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/fields.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/flags.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/hierview.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/improper.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/nbexclusion.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/pointer.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/residue.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/segment.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/selection.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/subset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities/test_checkers.py to test_checkers.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities/test_misctools.py to test_misctools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities/test_pathtools.py to test_pathtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory/test_dcdfile.py to test_dcdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory/test_frame.py to test_frame.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/test_analysis.py to test_analysis.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/test_msa.py to test_msa.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/test_msafile.py to test_msafile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/test_sequence.py to test_sequence.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_ciffile.py to test_ciffile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_dssp.py to test_dssp.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_header.py to test_header.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_localpdb.py to test_localpdb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_pdbfile.py to test_pdbfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_wwpdb.py to test_wwpdb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure/test_contacts.py to test_contacts.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure/test_measure.py to test_measure.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure/test_transform.py to test_transform.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree/test_kdtree.py to test_kdtree.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/test_conformation.py to test_conformation.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/test_ensemble.py to test_ensemble.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/test_functions.py to test_functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/test_pdbensemble.py to test_pdbensemble.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/test_editing.py to test_editing.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/test_enms.py to test_enms.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/test_pca.py to test_pca.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/test_signature.py to test_signature.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_atomic.py to test_atomic.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_atommap.py to test_atommap.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_fragment.py to test_fragment.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_hierview.py to test_hierview.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_select.py to test_select.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_subset.py to test_subset.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_anm.py to test_prody_anm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_catdcd.py to test_prody_catdcd.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_examples.py to test_prody_examples.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_gnm.py to test_prody_gnm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_pca.py to test_prody_pca.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_coevol.py to evol_coevol.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_conserv.py to evol_conserv.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_fetch.py to evol_fetch.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_filter.py to evol_filter.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_merge.py to evol_merge.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_occupancy.py to evol_occupancy.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_rankorder.py to evol_rankorder.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_refine.py to evol_refine.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_search.py to evol_search.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/nmaoptions.py to nmaoptions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_align.py to prody_align.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_anm.py to prody_anm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_biomol.py to prody_biomol.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_blast.py to prody_blast.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_catdcd.py to prody_catdcd.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_contacts.py to prody_contacts.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_eda.py to prody_eda.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_energy.py to prody_energy.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_fetch.py to prody_fetch.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_gnm.py to prody_gnm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_pca.py to prody_pca.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_select.py to prody_select.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/apptools.py to apptools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/TreeConstruction.py to TreeConstruction.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/catchall.py to catchall.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/checkers.py to checkers.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/doctools.py to doctools.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/drawtools.py to drawtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/eigtools.py to eigtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/laptools.py to laptools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/legacy.py to legacy.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/logger.py to logger.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/misctools.py to misctools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/pathtools.py to pathtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/seqtools.py to seqtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/settings.py to settings.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition/spectrus.py to spectrus.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/bird.py to bird.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/ccd.py to ccd.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/pdbligands.py to pdbligands.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/cluster.py to cluster.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/hic.py to hic.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/norm.py to norm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/straw.py to straw.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/dcdfile.py to dcdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/frame.py to frame.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/psffile.py to psffile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/trajbase.py to trajbase.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/trajectory.py to trajectory.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/trajfile.py to trajfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/analysis.py to analysis.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/msa.py to msa.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/msafile.py to msafile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/plotting.py to plotting.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/sequence.py to sequence.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/blastpdb.py to blastpdb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/ciffile.py to ciffile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/cifheader.py to cifheader.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/compare.py to compare.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/dssp.py to dssp.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/emdfile.py to emdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/header.py to header.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py to localpdb.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/pdbclusters.py to pdbclusters.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/pdbfile.py to pdbfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/starfile.py to starfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/stride.py to stride.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/wwpdb.py to wwpdb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure/contacts.py to contacts.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure/measure.py to measure.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure/transform.py to transform.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree/kdtree.py to kdtree.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/conformation.py to conformation.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/ensemble.py to ensemble.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/pdbensemble.py to pdbensemble.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/adaptive.py to adaptive.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/analysis.py to analysis.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/anm.py to anm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/bbenm.py to bbenm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/clustenm.py to clustenm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/compare.py to compare.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/editing.py to editing.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/entropy.py to entropy.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/essa.py to essa.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/exanm.py to exanm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/exgnm.py to exgnm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/gamma.py to gamma.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/gnm.py to gnm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/heatmapper.py to heatmapper.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/imanm.py to imanm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/mechstiff.py to mechstiff.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/mode.py to mode.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/modeset.py to modeset.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/nma.py to nma.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/nmdfile.py to nmdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/pca.py to pca.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/perturb.py to perturb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/plotting.py to plotting.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/rtb.py to rtb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/sampling.py to sampling.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/signature.py to signature.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/vmdfile.py to vmdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/cath.py to cath.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/dali.py to dali.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/goa.py to goa.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/pfam.py to pfam.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/quartataweb.py to quartataweb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/uniprot.py to uniprot.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/acceptor.py to acceptor.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/angle.py to angle.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/atom.py to atom.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/atomgroup.py to atomgroup.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/atomic.py to atomic.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/atommap.py to atommap.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/bond.py to bond.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/chain.py to chain.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/crossterm.py to crossterm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/dihedral.py to dihedral.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/donor.py to donor.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/fields.py to fields.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/flags.py to flags.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/hierview.py to hierview.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/improper.py to improper.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/nbexclusion.py to nbexclusion.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/pointer.py to pointer.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/residue.py to residue.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/segment.py to segment.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/select.py to select.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/selection.py to selection.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/subset.py to subset.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/__init__.py to __init__.cpython-312.pyc writing byte-compilation script '/tmp/tmpdrxt7l29.py' /usr/bin/python3 /tmp/tmpdrxt7l29.py /usr/lib64/python3.12/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' /usr/lib64/python3.12/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.12/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.12/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' removing /tmp/tmpdrxt7l29.py running install_egg_info running egg_info creating ProDy.egg-info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt writing manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' Copying ProDy.egg-info to /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/ProDy-2.4.0-py3.12.egg-info running install_scripts Installing evol script to /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin Installing prody script to /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + rm -rfv /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/__pycache__ + mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + rm -f /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/evol /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/prody + cd scripts + cp -pr ./prody ./python3.12-prody + cp -pr ./evol ./python3.12-evol + sed -i '1s=^#!/usr/bin/\(python\|env python\)[0-9.]*=#!/usr/bin/python3=' ./prody ./evol ./python3.12-prody ./python3.12-evol + for i in prody-3.12 + touch -r ./python3.12-prody prody-3.12 + install -p prody-3.12 /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + install -p ./prody /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + install -p ./python3.12-prody /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + ln -sf /usr/bin/python3.12-prody /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/prody-3.12 + for i in evol-3.12 + touch -r ./python3.12-evol evol-3.12 + install -p evol-3.12 /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + install -p ./evol /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + install -p ./python3.12-evol /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + ln -sf /usr/bin/python3.12-evol /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/evol-3.12 + cd .. + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 2.4.0-4.fc39 --unique-debug-suffix -2.4.0-4.fc39.aarch64 --unique-debug-src-base ProDy-2.4.0-4.fc39.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/ProDy-2.4.0 find-debuginfo: starting Extracting debug info from 7 files DWARF-compressing 7 files sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/ProDy-2.4.0-4.fc39.aarch64 464 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib/debug/usr/lib64/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12 using python3.12 /usr/lib64/python3.12/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.12/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.12/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.12/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.12/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' /usr/lib64/python3.12/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: python3-ProDy-2.4.0-4.fc39.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.aBUOmA + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + DOCDIR=/builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/doc/python3-ProDy + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/doc/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.0/README.rst /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/doc/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.KMK5YW + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + LICENSEDIR=/builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/licenses/python3-ProDy + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/licenses/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.0/LICENSE.rst /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/licenses/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 warning: absolute symlink: /usr/bin/evol-3.12 -> /usr/bin/python3.12-evol warning: absolute symlink: /usr/bin/prody-3.12 -> /usr/bin/python3.12-prody Provides: ProDy = 0:2.4.0-4.fc39 python-ProDy = 2.4.0-4.fc39 python3-ProDy = 2.4.0-4.fc39 python3-ProDy(aarch-64) = 2.4.0-4.fc39 python3.12-ProDy = 2.4.0-4.fc39 python3.12dist(prody) = 2.4 python3dist(prody) = 2.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.12 python3.12dist(biopython) python3.12dist(numpy) >= 1.10 python3.12dist(pyparsing) python3.12dist(scipy) python3.12dist(setuptools) Obsoletes: python-ProDy < 2.4.0-4.fc39 Processing files: ProDy-debugsource-2.4.0-4.fc39.aarch64 Provides: ProDy-debugsource = 2.4.0-4.fc39 ProDy-debugsource(aarch-64) = 2.4.0-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-ProDy-debuginfo-2.4.0-4.fc39.aarch64 Provides: debuginfo(build-id) = 1ca032e4fd39a721c5e1663e627edf5dce5de23d debuginfo(build-id) = 2b469c59e4efc99bf916d44dbb16464cfad8a14d debuginfo(build-id) = 39d785f719b7d4d0d6d60987b62d4869681473c9 debuginfo(build-id) = 647791d64228a529d629bf11ea2afebf87a48f2c debuginfo(build-id) = b13e56acf27b6548c54972399b4110773cb617d6 debuginfo(build-id) = b78b57f310b4097054fedd35bc0731d5b5e82987 debuginfo(build-id) = ed121a6e175b25ae81c12acebf8d4d21665b27c4 python-ProDy-debuginfo = 2.4.0-4.fc39 python3-ProDy-debuginfo = 2.4.0-4.fc39 python3-ProDy-debuginfo(aarch-64) = 2.4.0-4.fc39 python3.12-ProDy-debuginfo = 2.4.0-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: ProDy-debugsource(aarch-64) = 2.4.0-4.fc39 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 Wrote: /builddir/build/RPMS/ProDy-debugsource-2.4.0-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/python3-ProDy-debuginfo-2.4.0-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/python3-ProDy-2.4.0-4.fc39.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.ZpJwKR + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.JdLM4a + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/ProDy-2.4.0-SPECPARTS + rm -rf ProDy-2.4.0 ProDy-2.4.0.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: absolute symlink: /usr/bin/evol-3.12 -> /usr/bin/python3.12-evol absolute symlink: /usr/bin/prody-3.12 -> /usr/bin/python3.12-prody Finish: rpmbuild ProDy-2.4.0-4.fc39.src.rpm Finish: build phase for ProDy-2.4.0-4.fc39.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1691513207.623559/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-aarch64-1691513207.623559/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-aarch64-1691513207.623559/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/ProDy-2.4.0-4.fc39.src.rpm) Config(child) 1 minutes 47 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool