Warning: Permanently added '52.206.195.156' (ED25519) to the list of known hosts. INFO: Calling: curl -H Pragma: -o MorphIO-3.3.9.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/morphio/MorphIO-3.3.9.tar.gz/md5/789314860fdd6941794dc69f51175da2/MorphIO-3.3.9.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 3484k 100 3484k 0 0 140M 0 --:--:-- --:--:-- --:--:-- 136M INFO: Reading stdout from command: md5sum MorphIO-3.3.9.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-x7ds9b2p/morphio/morphio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-x7ds9b2p/morphio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714927155.801072 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-x7ds9b2p/morphio/morphio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-x7ds9b2p/morphio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714927155.801072 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-x7ds9b2p/morphio/morphio.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1714927155.801072/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1714927155.801072/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/c2cc38eea379327090571643f1e6dc4030051b4a5705709e530dc3b3a7363a30/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/c2cc38eea379327090571643f1e6dc4030051b4a5705709e530dc3b3a7363a30/merged) with podman image umount INFO: Using 'dnf' instead of 'dnf5' for bootstrap chroot INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf5 tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 38 MB/s | 3.2 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 50 MB/s | 17 MB 00:00 fedora 24 MB/s | 19 MB 00:00 Dependencies resolved. =========================================================================================================== Package Arch Version Repository Size =========================================================================================================== Installing: dnf5 aarch64 5.1.17-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 642 k dnf5-plugins aarch64 5.1.17-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 329 k Installing dependencies: fmt aarch64 10.2.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121 k libdnf5 aarch64 5.1.17-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 912 k libdnf5-cli aarch64 5.1.17-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 219 k sdbus-cpp aarch64 1.5.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103 k Transaction Summary =========================================================================================================== Install 6 Packages Total download size: 2.3 M Installed size: 7.4 M Downloading Packages: (1/6): fmt-10.2.1-4.fc41.aarch64.rpm 1.5 MB/s | 121 kB 00:00 (2/6): dnf5-5.1.17-1.fc41.aarch64.rpm 7.2 MB/s | 642 kB 00:00 (3/6): dnf5-plugins-5.1.17-1.fc41.aarch64.rpm 3.6 MB/s | 329 kB 00:00 (4/6): libdnf5-cli-5.1.17-1.fc41.aarch64.rpm 12 MB/s | 219 kB 00:00 (5/6): sdbus-cpp-1.5.0-2.fc41.aarch64.rpm 5.5 MB/s | 103 kB 00:00 (6/6): libdnf5-5.1.17-1.fc41.aarch64.rpm 19 MB/s | 912 kB 00:00 -------------------------------------------------------------------------------- Total 18 MB/s | 2.3 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : fmt-10.2.1-4.fc41.aarch64 1/6 Installing : libdnf5-5.1.17-1.fc41.aarch64 2/6 Installing : libdnf5-cli-5.1.17-1.fc41.aarch64 3/6 Installing : sdbus-cpp-1.5.0-2.fc41.aarch64 4/6 Installing : dnf5-5.1.17-1.fc41.aarch64 5/6 Installing : dnf5-plugins-5.1.17-1.fc41.aarch64 6/6 Running scriptlet: dnf5-plugins-5.1.17-1.fc41.aarch64 6/6 Installed: dnf5-5.1.17-1.fc41.aarch64 dnf5-plugins-5.1.17-1.fc41.aarch64 fmt-10.2.1-4.fc41.aarch64 libdnf5-5.1.17-1.fc41.aarch64 libdnf5-cli-5.1.17-1.fc41.aarch64 sdbus-cpp-1.5.0-2.fc41.aarch64 Complete! INFO: Switching package manager from dnf to the dnf5 (direct choice) Finish(bootstrap): installing dnf5 tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1714927155.801072/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.6.0-2.fc40.aarch64 python3-dnf-4.19.2-1.fc41.noarch yum-4.19.2-1.fc41.noarch dnf5-5.1.17-1.fc41.aarch64 dnf5-plugins-5.1.17-1.fc41.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 38.7 KiB/s | 9.9 KiB | 00m00s Copr repository 100% | 109.8 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 69.9 KiB/s | 4.1 KiB | 00m00s Copr repository 100% | 65.0 MiB/s | 3.2 MiB | 00m00s Repositories loaded. 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3.11-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB gzip aarch64 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 488.8 KiB info aarch64 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 613.5 KiB patch aarch64 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 390.5 KiB redhat-rpm-config noarch 288-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 183.3 KiB rpm-build aarch64 4.19.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB sed aarch64 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB shadow-utils aarch64 2:4.15.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.3 MiB tar aarch64 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB unzip aarch64 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 726.4 KiB util-linux aarch64 2.40-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17.5 MiB which aarch64 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 248.1 KiB xz aarch64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB Installing dependencies: alternatives aarch64 1.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.2 KiB ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.7 KiB audit-libs aarch64 4.0.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 547.2 KiB authselect aarch64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309.4 KiB authselect-libs aarch64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 931.8 KiB basesystem noarch 11-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B binutils aarch64 2.42.50-6.fc41 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB libutempter aarch64 1.2.1-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 417.6 KiB libuuid aarch64 2.40-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 197.4 KiB libverto aarch64 0.3.2-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 197.4 KiB libxcrypt aarch64 4.4.36-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 398.9 KiB libxml2 aarch64 2.12.6-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB libzstd aarch64 1.5.6-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 795.9 KiB lua-libs aarch64 5.4.6-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 393.0 KiB lua-srpm-macros noarch 1-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 KiB lz4-libs aarch64 1.9.4-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 261.4 KiB mpfr aarch64 4.2.1-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 818.7 KiB ncurses-base noarch 6.4-12.20240127.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.2 KiB ncurses-libs aarch64 6.4-12.20240127.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB ocaml-srpm-macros noarch 9-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap aarch64 2.6.7-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB openssl-libs aarch64 1:3.2.1-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 MiB p11-kit aarch64 0.25.3-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.8 MiB p11-kit-trust aarch64 0.25.3-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 655.4 KiB package-notes-srpm-macros noarch 0.5-11.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam aarch64 1.6.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.0 MiB pam-libs aarch64 1.6.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 607.0 KiB pcre2 aarch64 10.43-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 905.3 KiB pcre2-syntax noarch 10.43-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 249.0 KiB perl-srpm-macros noarch 1-53.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf aarch64 2.1.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 238.3 KiB pkgconf-m4 noarch 2.1.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13.9 KiB pkgconf-pkg-config aarch64 2.1.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 990.0 B popt aarch64 1.19-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 272.8 KiB publicsuffix-list-dafsa noarch 20240107-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.12.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 KiB python-srpm-macros noarch 3.12-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50.5 KiB qt5-srpm-macros noarch 5.15.13-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 492.0 B qt6-srpm-macros noarch 6.7.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline aarch64 8.2-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 689.1 KiB rpm aarch64 4.19.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.0 MiB rpm-build-libs aarch64 4.19.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262.4 KiB rpm-libs aarch64 4.19.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.6 KiB rpm-sequoia aarch64 1.6.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB rust-srpm-macros noarch 26.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.14.5-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.4 KiB sqlite-libs aarch64 3.45.3-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB systemd-libs aarch64 255.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB util-linux-core aarch64 2.40-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.2 MiB xxhash-libs aarch64 0.8.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 212.2 KiB xz-libs aarch64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 265.6 KiB zig-srpm-macros noarch 1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip aarch64 3.0-40.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB zlib-ng-compat aarch64 2.1.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 261.7 KiB zstd aarch64 1.5.6-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 52 MiB. Need to download 4 MiB. After this operation 307 MiB will be used (install 307 MiB, remove 0 B). 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326.8 MiB/s | 1.0 MiB | 00m00s [121/155] Installing binutils-gold-0:2. 100% | 192.1 MiB/s | 3.1 MiB | 00m00s >>> Running post-install scriptlet: binutils-gold-0:2.42.50-6.fc41.aarch64 >>> Stop post-install scriptlet: binutils-gold-0:2.42.50-6.fc41.aarch64 [122/155] Installing binutils-0:2.42.50 100% | 352.4 MiB/s | 33.5 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.42.50-6.fc41.aarch64 >>> Stop post-install scriptlet: binutils-0:2.42.50-6.fc41.aarch64 [123/155] Installing elfutils-0:0.191-7 100% | 358.2 MiB/s | 5.0 MiB | 00m00s [124/155] Installing gdb-minimal-0:14.2 100% | 343.8 MiB/s | 12.7 MiB | 00m00s [125/155] Installing debugedit-0:5.0-15 100% | 244.8 MiB/s | 501.4 KiB | 00m00s [126/155] Installing rpm-build-libs-0:4 100% | 257.0 MiB/s | 263.2 KiB | 00m00s [127/155] Installing curl-0:8.7.1-1.fc4 100% | 66.7 MiB/s | 888.5 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.aarch64 >>> Stop pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.aarch64 [128/155] Installing rpm-0:4.19.1.1-1.f 100% | 149.3 MiB/s | 3.4 MiB | 00m00s [129/155] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [130/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [131/155] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s [132/155] Installing pkgconf-m4-0:2.1.0 100% | 0.0 B/s | 14.3 KiB | 00m00s [133/155] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [134/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [135/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [136/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 768.0 B | 00m00s [137/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [138/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [139/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [140/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [141/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [142/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [143/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [144/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [145/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [146/155] Installing fonts-srpm-macros- 100% | 55.1 MiB/s | 56.5 KiB | 00m00s [147/155] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.3 KiB | 00m00s [148/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [149/155] Installing python-srpm-macros 100% | 50.5 MiB/s | 51.7 KiB | 00m00s [150/155] Installing redhat-rpm-config- 100% | 92.6 MiB/s | 189.7 KiB | 00m00s [151/155] Installing rpm-build-0:4.19.1 100% | 301.1 MiB/s | 1.2 MiB | 00m00s [152/155] Installing pyproject-srpm-mac 100% | 2.0 MiB/s | 2.1 KiB | 00m00s [153/155] Installing util-linux-0:2.40- 100% | 365.2 MiB/s | 17.5 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40-13.fc41.aarch64 >>> Stop post-install scriptlet: util-linux-0:2.40-13.fc41.aarch64 [154/155] Installing which-0:2.21-41.fc 100% | 122.2 MiB/s | 250.3 KiB | 00m00s [155/155] Installing info-0:7.1-2.fc40. 100% | 513.3 KiB/s | 613.9 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-9.fc41.aarch64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-9.fc41.aarch64 >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.aarch64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.aarch64 >>> Running post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.aarch64 >>> Stop post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.aarch64 >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-17.fc41.aarch64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-17.fc41.aarch64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 Warning: skipped PGP checks for 153 package(s). Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.aarch64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.aarch64 authselect-1.5.0-5.fc41.aarch64 authselect-libs-1.5.0-5.fc41.aarch64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.aarch64 binutils-2.42.50-6.fc41.aarch64 binutils-gold-2.42.50-6.fc41.aarch64 bzip2-1.0.8-18.fc40.aarch64 bzip2-libs-1.0.8-18.fc40.aarch64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.aarch64 coreutils-common-9.5-1.fc41.aarch64 cpio-2.15-1.fc40.aarch64 cracklib-2.9.11-5.fc40.aarch64 crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.aarch64 cyrus-sasl-lib-2.1.28-19.fc40.aarch64 debugedit-5.0-15.fc41.aarch64 diffutils-3.10-5.fc40.aarch64 dwz-0.15-6.fc40.aarch64 ed-1.20.2-1.fc41.aarch64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.aarch64 elfutils-debuginfod-client-0.191-7.fc41.aarch64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.aarch64 elfutils-libs-0.191-7.fc41.aarch64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.aarch64 file-libs-5.45-5.fc41.aarch64 filesystem-3.18-9.fc41.aarch64 findutils-4.9.0-8.fc40.aarch64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.aarch64 gdb-minimal-14.2-6.fc41.aarch64 gdbm-1.23-6.fc40.aarch64 gdbm-libs-1.23-6.fc40.aarch64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-17.fc41.aarch64 glibc-common-2.39.9000-17.fc41.aarch64 glibc-gconv-extra-2.39.9000-17.fc41.aarch64 glibc-minimal-langpack-2.39.9000-17.fc41.aarch64 gmp-6.3.0-1.fc41.aarch64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.aarch64 gzip-1.13-1.fc40.aarch64 info-7.1-2.fc40.aarch64 jansson-2.13.1-9.fc40.aarch64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.aarch64 krb5-libs-1.21.2-5.fc40.aarch64 libacl-2.3.2-1.fc40.aarch64 libarchive-3.7.4-1.fc41.aarch64 libattr-2.5.2-3.fc40.aarch64 libblkid-2.40-13.fc41.aarch64 libbrotli-1.1.0-3.fc40.aarch64 libcap-2.69-8.fc41.aarch64 libcap-ng-0.8.5-1.fc41.aarch64 libcom_err-1.47.0-5.fc40.aarch64 libcurl-8.7.1-1.fc41.aarch64 libeconf-0.6.2-1.fc41.aarch64 libevent-2.1.12-12.fc40.aarch64 libfdisk-2.40-13.fc41.aarch64 libffi-3.4.6-1.fc41.aarch64 libgcc-14.0.1-0.16.fc41.aarch64 libgomp-14.0.1-0.16.fc41.aarch64 libidn2-2.3.7-1.fc40.aarch64 libmount-2.40-13.fc41.aarch64 libnghttp2-1.61.0-1.fc41.aarch64 libnsl2-2.0.1-1.fc40.aarch64 libpkgconf-2.1.0-1.fc40.aarch64 libpsl-0.21.5-3.fc40.aarch64 libpwquality-1.4.5-9.fc40.aarch64 libselinux-3.6-4.fc40.aarch64 libsemanage-3.6-3.fc40.aarch64 libsepol-3.6-3.fc40.aarch64 libsmartcols-2.40-13.fc41.aarch64 libssh-0.10.6-6.fc41.aarch64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.16.fc41.aarch64 libtasn1-4.19.0-6.fc40.aarch64 libtirpc-1.3.4-1.rc3.fc41.aarch64 libtool-ltdl-2.4.7-10.fc40.aarch64 libunistring-1.1-7.fc41.aarch64 libutempter-1.2.1-13.fc40.aarch64 libuuid-2.40-13.fc41.aarch64 libverto-0.3.2-8.fc40.aarch64 libxcrypt-4.4.36-5.fc40.aarch64 libxml2-2.12.6-1.fc41.aarch64 libzstd-1.5.6-1.fc41.aarch64 lua-libs-5.4.6-5.fc40.aarch64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.aarch64 mpfr-4.2.1-3.fc40.aarch64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.aarch64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.aarch64 openssl-libs-3.2.1-6.fc41.aarch64 p11-kit-0.25.3-4.fc40.aarch64 p11-kit-trust-0.25.3-4.fc40.aarch64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.aarch64 pam-libs-1.6.1-1.fc41.aarch64 patch-2.7.6-24.fc40.aarch64 pcre2-10.43-2.fc41.aarch64 pcre2-syntax-10.43-2.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.aarch64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.aarch64 popt-1.19-6.fc40.aarch64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.aarch64 redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.aarch64 rpm-build-4.19.1.1-1.fc40.aarch64 rpm-build-libs-4.19.1.1-1.fc40.aarch64 rpm-libs-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.6.0-2.fc40.aarch64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.aarch64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-2.fc41.aarch64 sqlite-libs-3.45.3-1.fc41.aarch64 systemd-libs-255.5-1.fc41.aarch64 tar-1.35-3.fc40.aarch64 unzip-6.0-63.fc40.aarch64 util-linux-2.40-13.fc41.aarch64 util-linux-core-2.40-13.fc41.aarch64 which-2.21-41.fc40.aarch64 xxhash-libs-0.8.2-2.fc40.aarch64 xz-5.4.6-3.fc41.aarch64 xz-libs-5.4.6-3.fc41.aarch64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.aarch64 zlib-ng-compat-2.1.6-2.fc40.aarch64 zstd-1.5.6-1.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1713916800 Wrote: /builddir/build/SRPMS/morphio-3.3.9-2.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-aarch64-1714927155.801072/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1714927155.801072/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-x7ds9b2p/morphio/morphio.spec) Config(child) 0 minutes 24 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/morphio-3.3.9-2.fc41.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1714927155.801072/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1714927155.801072/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1714927155.801072/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.6.0-2.fc40.aarch64 python3-dnf-4.19.2-1.fc41.noarch yum-4.19.2-1.fc41.noarch dnf5-5.1.17-1.fc41.aarch64 dnf5-plugins-5.1.17-1.fc41.aarch64 Finish: chroot init Start: build phase for morphio-3.3.9-2.fc41.src.rpm Start: build setup for morphio-3.3.9-2.fc41.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1713916800 Wrote: /builddir/build/SRPMS/morphio-3.3.9-2.fc41.src.rpm Updating and loading repositories: fedora 100% | 34.7 KiB/s | 9.9 KiB | 00m00s Copr repository 100% | 85.4 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 75.0 KiB/s | 4.1 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: boost-devel aarch64 1.83.0-3.fc40 copr_base 143.0 MiB catch2-devel aarch64 2.13.10-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 952.8 KiB cmake aarch64 3.28.3-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.5 MiB gcc-c++ aarch64 14.0.1-0.16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.0 MiB gsl-lite-devel aarch64 0.41.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 308.1 KiB gulrak-filesystem-devel aarch64 1.5.14-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 272.2 KiB hdf5-devel aarch64 1.12.1-15.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.8 MiB highfive-devel aarch64 2.9.0-3.fc41 copr_base 369.6 KiB lcov noarch 2.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 930.9 KiB lexertl14-devel aarch64 0.1.0^20240301git3097246-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 572.9 KiB ninja-build aarch64 1.11.1-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 451.1 KiB pybind11-devel aarch64 2.12.0-1.fc41 copr_base 825.8 KiB python3-devel aarch64 3.12.3-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python3-h5py aarch64 3.11.0-1.fc41 copr_base 6.9 MiB python3-numpy aarch64 1:1.26.4-3.fc41 copr_base 41.5 MiB python3-pytest noarch 7.4.3-5.fc41 copr_base 15.0 MiB python3-requests noarch 2.31.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 462.4 KiB python3-setuptools noarch 69.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 MiB python3-setuptools_scm noarch 8.0.4-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 307.7 KiB Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB annobin-docs 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.7 KiB perl-podlators noarch 1:5.01-502.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 308.1 KiB perl-vars noarch 1.05-507.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.9 KiB perl-version aarch64 8:0.99.32-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 288.7 KiB perltidy noarch 20240202-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.6 MiB pixman aarch64 0.43.4-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 718.3 KiB pyproject-rpm-macros noarch 1.12.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 98.8 KiB python-pip-wheel noarch 24.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB python-rpm-macros noarch 3.12-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.1 KiB python3 aarch64 3.12.3-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 211.4 KiB python3-cached_property noarch 1.5.2-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.3 KiB python3-charset-normalizer noarch 3.3.2-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 312.7 KiB python3-idna noarch 3.7-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 594.6 KiB python3-iniconfig noarch 1.1.1-16.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.5 KiB python3-libs aarch64 3.12.3-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.2 MiB python3-packaging noarch 24.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 424.8 KiB python3-pluggy noarch 1.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 182.5 KiB python3-rpm-generators noarch 14-10.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.7 KiB python3-rpm-macros noarch 3.12-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.4 KiB python3-six noarch 1.16.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 117.7 KiB python3-typing-extensions noarch 4.11.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 420.1 KiB python3-urllib3 noarch 1.26.18-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 996.2 KiB rav1e-libs aarch64 0.7.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB rhash aarch64 1.4.4-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 585.8 KiB svt-av1-libs aarch64 1.4.1-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.5 MiB tzdata noarch 2024a-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB vim-filesystem noarch 2:9.1.354-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B xml-common noarch 0.6.3-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB zlib-ng-compat-devel aarch64 2.1.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103.4 KiB Transaction Summary: Installing: 285 packages Total size of inbound packages is 186 MiB. 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MiB/s | 29.6 KiB | 00m00s [232/285] perl-Hash-Util-FieldHash-0:1. 100% | 1.9 MiB/s | 38.7 KiB | 00m00s [233/285] perl-Module-Implementation-0: 100% | 954.0 KiB/s | 19.1 KiB | 00m00s [234/285] perl-Sub-Exporter-Progressive 100% | 834.3 KiB/s | 20.9 KiB | 00m00s [235/285] perl-Variable-Magic-0:0.64-1. 100% | 2.5 MiB/s | 54.7 KiB | 00m00s [236/285] rav1e-libs-0:0.7.1-1.fc40.aar 100% | 31.2 MiB/s | 797.9 KiB | 00m00s [237/285] libdav1d-0:1.4.0-1.fc41.aarch 100% | 12.8 MiB/s | 354.7 KiB | 00m00s [238/285] libaom-0:3.8.2-2.fc41.aarch64 100% | 23.5 MiB/s | 1.6 MiB | 00m00s [239/285] perl-English-0:1.11-507.fc41. 100% | 653.0 KiB/s | 13.7 KiB | 00m00s [240/285] svt-av1-libs-0:1.4.1-5.fc40.a 100% | 37.6 MiB/s | 1.1 MiB | 00m00s [241/285] perl-HTML-Parser-0:3.82-1.fc4 100% | 5.8 MiB/s | 118.1 KiB | 00m00s [242/285] perl-Pod-Html-0:1.34-507.fc41 100% | 1.5 MiB/s | 29.3 KiB | 00m00s [243/285] perl-Package-Stash-0:0.40-7.f 100% | 1.8 MiB/s | 32.6 KiB | 00m00s [244/285] perl-Sub-Exporter-0:0.991-3.f 100% | 3.7 MiB/s | 71.2 KiB | 00m00s [245/285] perl-Data-OptList-0:0.114-4.f 100% | 1.4 MiB/s | 26.9 KiB | 00m00s [246/285] perl-Package-Generator-0:1.10 100% | 1.1 MiB/s | 22.3 KiB | 00m00s [247/285] perl-Params-Util-0:1.102-14.f 100% | 1.6 MiB/s | 32.2 KiB | 00m00s [248/285] perl-Sub-Install-0:0.929-5.fc 100% | 1.0 MiB/s | 22.9 KiB | 00m00s [249/285] perl-Pod-Simple-1:3.45-6.fc40 100% | 10.7 MiB/s | 208.6 KiB | 00m00s [250/285] perl-HTML-Tagset-0:3.24-1.fc4 100% | 1.3 MiB/s | 18.3 KiB | 00m00s [251/285] perl-Package-Stash-XS-0:0.30- 100% | 1.6 MiB/s | 35.1 KiB | 00m00s [252/285] perl-Text-Tabs+Wrap-0:2024.00 100% | 698.2 KiB/s | 21.6 KiB | 00m00s [253/285] perl-HTTP-Message-0:6.45-3.fc 100% | 5.0 MiB/s | 96.4 KiB | 00m00s [254/285] perl-URI-0:5.28-1.fc41.noarch 100% | 5.6 MiB/s | 119.6 KiB | 00m00s [255/285] perl-Class-Inspector-0:1.36-1 100% | 1.6 MiB/s | 30.2 KiB | 00m00s [256/285] perl-DateTime-TimeZone-System 100% | 1.7 MiB/s | 22.5 KiB | 00m00s [257/285] perl-Date-ISO8601-0:0.005-20. 100% | 795.9 KiB/s | 19.1 KiB | 00m00s [258/285] perl-Params-Classify-0:0.015- 100% | 1.5 MiB/s | 30.8 KiB | 00m00s [259/285] perl-Pod-Escapes-1:1.07-503.f 100% | 1.4 MiB/s | 19.6 KiB | 00m00s [260/285] perl-libnet-0:3.15-503.fc40.n 100% | 4.8 MiB/s | 122.5 KiB | 00m00s [261/285] perl-Devel-CallChecker-0:0.00 100% | 1.1 MiB/s | 24.0 KiB | 00m00s [262/285] perl-Compress-Raw-Zlib-0:2.21 100% | 3.9 MiB/s | 63.6 KiB | 00m00s [263/285] perl-Clone-0:0.46-6.fc40.aarc 100% | 838.6 KiB/s | 21.8 KiB | 00m00s [264/285] perl-Encode-Locale-0:1.05-29. 100% | 972.5 KiB/s | 18.5 KiB | 00m00s [265/285] perl-HTTP-Date-0:6.06-4.fc40. 100% | 1.2 MiB/s | 24.3 KiB | 00m00s [266/285] perl-IO-HTML-0:1.004-12.fc40. 100% | 2.1 MiB/s | 27.5 KiB | 00m00s [267/285] perl-IO-Compress-0:2.212-1.fc 100% | 11.4 MiB/s | 291.9 KiB | 00m00s [268/285] perl-LWP-MediaTypes-0:6.04-18 100% | 1.7 MiB/s | 33.0 KiB | 00m00s [269/285] perl-I18N-Langinfo-0:0.22-507 100% | 1.1 MiB/s | 22.6 KiB | 00m00s [270/285] perl-DynaLoader-Functions-0:0 100% | 1.0 MiB/s | 18.8 KiB | 00m00s [271/285] perl-IO-Socket-IP-0:0.42-2.fc 100% | 2.3 MiB/s | 41.7 KiB | 00m00s [272/285] mailcap-0:2.1.54-5.fc40.noarc 100% | 1.8 MiB/s | 34.1 KiB | 00m00s [273/285] perl-Compress-Raw-Bzip2-0:2.2 100% | 1.6 MiB/s | 35.3 KiB | 00m00s [274/285] perl-Pod-Perldoc-0:3.28.01-50 100% | 5.2 MiB/s | 79.4 KiB | 00m00s [275/285] perl-Pod-Usage-4:2.03-503.fc4 100% | 1.6 MiB/s | 39.7 KiB | 00m00s [276/285] perl-podlators-1:5.01-502.fc4 100% | 6.2 MiB/s | 120.9 KiB | 00m00s [277/285] perl-HTTP-Tiny-0:0.088-5.fc40 100% | 2.7 MiB/s | 55.6 KiB | 00m00s [278/285] perl-IPC-Open3-0:1.22-507.fc4 100% | 1.2 MiB/s | 22.0 KiB | 00m00s [279/285] perl-Mozilla-CA-0:20240313-1. 100% | 738.7 KiB/s | 14.0 KiB | 00m00s [280/285] groff-base-0:1.23.0-6.fc40.aa 100% | 20.8 MiB/s | 1.1 MiB | 00m00s [281/285] perl-IO-Socket-SSL-0:2.085-1. 100% | 8.1 MiB/s | 224.5 KiB | 00m00s [282/285] perl-Term-Cap-0:1.18-503.fc40 100% | 1.6 MiB/s | 21.9 KiB | 00m00s [283/285] perl-Term-ANSIColor-0:5.01-50 100% | 2.4 MiB/s | 47.6 KiB | 00m00s [284/285] perl-Net-SSLeay-0:1.94-3.fc40 100% | 14.5 MiB/s | 356.4 KiB | 00m00s [285/285] ncurses-0:6.4-12.20240127.fc4 100% | 15.6 MiB/s | 414.9 KiB | 00m00s -------------------------------------------------------------------------------- [285/285] Total 100% | 63.0 MiB/s | 144.1 MiB | 00m02s Running transaction [ 1/287] Verify package files 100% | 413.0 B/s | 285.0 B | 00m01s [ 2/287] Prepare transaction 100% | 1.0 KiB/s | 285.0 B | 00m00s [ 3/287] Installing boost-system-0:1.8 100% | 192.6 MiB/s | 197.3 KiB | 00m00s [ 4/287] Installing cmake-filesystem-0 100% | 3.5 MiB/s | 7.1 KiB | 00m00s [ 5/287] Installing boost-chrono-0:1.8 100% | 193.8 MiB/s | 198.4 KiB | 00m00s [ 6/287] Installing boost-thread-0:1.8 100% | 259.1 MiB/s | 265.3 KiB | 00m00s [ 7/287] Installing libicu-0:74.2-1.fc 100% | 352.0 MiB/s | 35.9 MiB | 00m00s [ 8/287] Installing libmpc-0:1.3.1-5.f 100% | 275.6 MiB/s | 282.2 KiB | 00m00s [ 9/287] Installing libgfortran-0:14.0 100% | 380.4 MiB/s | 1.5 MiB | 00m00s [ 10/287] Installing boost-regex-0:1.83 100% | 161.6 MiB/s | 331.1 KiB | 00m00s [ 11/287] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 12/287] Installing libwebp-0:1.4.0-1. 100% | 309.6 MiB/s | 1.2 MiB | 00m00s [ 13/287] Installing libpng-2:1.6.40-3. 100% | 327.0 MiB/s | 334.9 KiB | 00m00s [ 14/287] Installing boost-context-0:1. 100% | 192.8 MiB/s | 197.4 KiB | 00m00s [ 15/287] Installing boost-atomic-0:1.8 100% | 193.2 MiB/s | 197.9 KiB | 00m00s [ 16/287] Installing boost-filesystem-0 100% | 257.7 MiB/s | 263.9 KiB | 00m00s [ 17/287] Installing python-rpm-macros- 100% | 0.0 B/s | 22.8 KiB | 00m00s [ 18/287] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 19/287] Installing libjpeg-turbo-0:3. 100% | 258.5 MiB/s | 794.1 KiB | 00m00s [ 20/287] Installing boost-date-time-0: 100% | 192.7 MiB/s | 197.3 KiB | 00m00s [ 21/287] Installing boost-container-0: 100% | 193.8 MiB/s | 198.4 KiB | 00m00s [ 22/287] Installing expat-0:2.6.2-1.fc 100% | 263.1 MiB/s | 538.8 KiB | 00m00s [ 23/287] Installing libaec-0:1.1.2-1.f 100% | 201.4 MiB/s | 412.4 KiB | 00m00s [ 24/287] Installing hdf5-0:1.12.1-15.f 100% | 401.5 MiB/s | 12.4 MiB | 00m00s [ 25/287] Installing vim-filesystem-2:9 100% | 4.6 MiB/s | 4.7 KiB | 00m00s [ 26/287] Installing emacs-filesystem-1 100% | 0.0 B/s | 544.0 B | 00m00s [ 27/287] Installing libaec-devel-0:1.1 100% | 0.0 B/s | 12.9 KiB | 00m00s [ 28/287] Installing boost-json-0:1.83. 100% | 192.0 MiB/s | 393.1 KiB | 00m00s [ 29/287] Installing boost-wave-0:1.83. 100% | 355.0 MiB/s | 727.1 KiB | 00m00s [ 30/287] Installing pyproject-rpm-macr 100% | 98.4 MiB/s | 100.8 KiB | 00m00s [ 31/287] Installing boost-fiber-0:1.83 100% | 194.7 MiB/s | 199.3 KiB | 00m00s [ 32/287] Installing boost-log-0:1.83.0 100% | 334.9 MiB/s | 1.7 MiB | 00m00s [ 33/287] Installing boost-coroutine-0: 100% | 193.5 MiB/s | 198.1 KiB | 00m00s [ 34/287] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB | 00m00s [ 35/287] Installing boost-graph-0:1.83 100% | 225.7 MiB/s | 462.3 KiB | 00m00s [ 36/287] Installing cpp-0:14.0.1-0.16. 100% | 311.7 MiB/s | 31.8 MiB | 00m00s [ 37/287] Installing libicu-devel-0:74. 100% | 207.7 MiB/s | 5.8 MiB | 00m00s [ 38/287] Installing boost-locale-0:1.8 100% | 214.9 MiB/s | 660.1 KiB | 00m00s [ 39/287] Installing boost-type_erasure 100% | 194.2 MiB/s | 198.9 KiB | 00m00s [ 40/287] Installing boost-timer-0:1.83 100% | 193.3 MiB/s | 198.0 KiB | 00m00s [ 41/287] Installing ncurses-0:6.4-12.2 100% | 129.4 MiB/s | 1.7 MiB | 00m00s >>> Running pre-install scriptlet: groff-base-0:1.23.0-6.fc40.aarch64 >>> Stop pre-install scriptlet: groff-base-0:1.23.0-6.fc40.aarch64 [ 42/287] Installing groff-base-0:1.23. 100% | 185.7 MiB/s | 5.4 MiB | 00m00s >>> Running post-install scriptlet: groff-base-0:1.23.0-6.fc40.aarch64 >>> Stop post-install scriptlet: groff-base-0:1.23.0-6.fc40.aarch64 [ 43/287] Installing perl-Digest-0:1.20 100% | 36.1 MiB/s | 37.0 KiB | 00m00s [ 44/287] Installing perl-Digest-MD5-0: 100% | 228.2 MiB/s | 233.6 KiB | 00m00s [ 45/287] Installing perl-B-0:1.88-507. 100% | 197.8 MiB/s | 607.7 KiB | 00m00s [ 46/287] Installing perl-FileHandle-0: 100% | 0.0 B/s | 9.8 KiB | 00m00s [ 47/287] Installing perl-Data-Dumper-0 100% | 259.3 MiB/s | 265.5 KiB | 00m00s [ 48/287] Installing perl-libnet-0:3.15 100% | 143.7 MiB/s | 294.3 KiB | 00m00s [ 49/287] Installing perl-AutoLoader-0: 100% | 0.0 B/s | 20.9 KiB | 00m00s [ 50/287] Installing perl-URI-0:5.28-1. 100% | 82.0 MiB/s | 251.8 KiB | 00m00s [ 51/287] Installing perl-Time-Local-2: 100% | 68.9 MiB/s | 70.5 KiB | 00m00s [ 52/287] Installing perl-File-Path-0:2 100% | 63.0 MiB/s | 64.5 KiB | 00m00s [ 53/287] Installing perl-locale-0:1.10 100% | 0.0 B/s | 6.6 KiB | 00m00s [ 54/287] Installing perl-if-0:0.61.000 100% | 0.0 B/s | 6.2 KiB | 00m00s [ 55/287] Installing perl-Text-Tabs+Wra 100% | 23.3 MiB/s | 23.8 KiB | 00m00s [ 56/287] Installing perl-Pod-Escapes-1 100% | 0.0 B/s | 25.9 KiB | 00m00s [ 57/287] Installing perl-IO-Socket-IP- 100% | 98.1 MiB/s | 100.4 KiB | 00m00s [ 58/287] Installing perl-Mozilla-CA-0: 100% | 10.2 MiB/s | 10.5 KiB | 00m00s [ 59/287] Installing perl-Net-SSLeay-0: 100% | 179.1 MiB/s | 1.4 MiB | 00m00s [ 60/287] Installing perl-IO-Socket-SSL 100% | 224.3 MiB/s | 689.0 KiB | 00m00s [ 61/287] Installing perl-POSIX-0:2.13- 100% | 318.6 MiB/s | 326.3 KiB | 00m00s [ 62/287] Installing perl-Class-Struct- 100% | 0.0 B/s | 25.9 KiB | 00m00s [ 63/287] Installing perl-File-Temp-1:0 100% | 160.2 MiB/s | 164.0 KiB | 00m00s [ 64/287] Installing perl-IPC-Open3-0:1 100% | 0.0 B/s | 23.3 KiB | 00m00s [ 65/287] Installing perl-Term-ANSIColo 100% | 96.8 MiB/s | 99.1 KiB | 00m00s [ 66/287] Installing perl-HTTP-Tiny-0:0 100% | 150.6 MiB/s | 154.2 KiB | 00m00s [ 67/287] Installing perl-Pod-Simple-1: 100% | 185.4 MiB/s | 569.4 KiB | 00m00s [ 68/287] Installing perl-Term-Cap-0:1. 100% | 29.8 MiB/s | 30.5 KiB | 00m00s [ 69/287] Installing perl-Socket-4:2.03 100% | 267.6 MiB/s | 274.0 KiB | 00m00s [ 70/287] Installing perl-SelectSaver-0 100% | 0.0 B/s | 2.6 KiB | 00m00s [ 71/287] Installing perl-Symbol-0:1.09 100% | 0.0 B/s | 7.2 KiB | 00m00s [ 72/287] Installing perl-File-stat-0:1 100% | 0.0 B/s | 13.2 KiB | 00m00s [ 73/287] Installing perl-Pod-Perldoc-0 100% | 82.3 MiB/s | 168.6 KiB | 00m00s [ 74/287] Installing perl-podlators-1:5 100% | 152.4 MiB/s | 312.1 KiB | 00m00s [ 75/287] Installing perl-base-0:2.27-5 100% | 0.0 B/s | 12.9 KiB | 00m00s [ 76/287] Installing perl-Fcntl-0:1.15- 100% | 197.0 MiB/s | 201.7 KiB | 00m00s [ 77/287] Installing perl-Text-ParseWor 100% | 0.0 B/s | 14.5 KiB | 00m00s [ 78/287] Installing perl-overloading-0 100% | 0.0 B/s | 5.5 KiB | 00m00s [ 79/287] Installing perl-IO-0:1.52-507 100% | 157.8 MiB/s | 323.3 KiB | 00m00s [ 80/287] Installing perl-mro-0:1.28-50 100% | 205.8 MiB/s | 210.7 KiB | 00m00s [ 81/287] Installing perl-Pod-Usage-4:2 100% | 84.2 MiB/s | 86.3 KiB | 00m00s [ 82/287] Installing perl-File-Basename 100% | 0.0 B/s | 14.6 KiB | 00m00s [ 83/287] Installing perl-constant-0:1. 100% | 26.7 MiB/s | 27.4 KiB | 00m00s [ 84/287] Installing perl-vars-0:1.05-5 100% | 0.0 B/s | 4.3 KiB | 00m00s [ 85/287] Installing perl-parent-1:0.24 100% | 0.0 B/s | 10.4 KiB | 00m00s [ 86/287] Installing perl-Errno-0:1.37- 100% | 0.0 B/s | 8.8 KiB | 00m00s [ 87/287] Installing perl-Scalar-List-U 100% | 137.1 MiB/s | 280.7 KiB | 00m00s [ 88/287] Installing perl-Getopt-Std-0: 100% | 0.0 B/s | 11.6 KiB | 00m00s [ 89/287] Installing perl-MIME-Base64-0 100% | 219.0 MiB/s | 224.3 KiB | 00m00s [ 90/287] Installing perl-Storable-1:3. 100% | 182.6 MiB/s | 373.9 KiB | 00m00s [ 91/287] Installing perl-overload-0:1. 100% | 0.0 B/s | 71.9 KiB | 00m00s [ 92/287] Installing perl-Getopt-Long-1 100% | 143.3 MiB/s | 146.7 KiB | 00m00s [ 93/287] Installing perl-Exporter-0:5. 100% | 54.2 MiB/s | 55.5 KiB | 00m00s [ 94/287] Installing perl-DynaLoader-0: 100% | 0.0 B/s | 32.5 KiB | 00m00s [ 95/287] 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00m00s [276/287] Installing python3-h5py-0:3.1 100% | 144.7 MiB/s | 6.9 MiB | 00m00s [277/287] Installing boost-devel-0:1.83 100% | 194.4 MiB/s | 145.8 MiB | 00m01s [278/287] Installing python3-pytest-0:7 100% | 292.3 MiB/s | 15.2 MiB | 00m00s [279/287] Installing python3-requests-0 100% | 115.8 MiB/s | 474.5 KiB | 00m00s [280/287] Installing python3-setuptools 100% | 79.8 MiB/s | 326.9 KiB | 00m00s [281/287] Installing python3-devel-0:3. 100% | 127.6 MiB/s | 1.3 MiB | 00m00s [282/287] Installing ninja-build-0:1.11 100% | 147.9 MiB/s | 454.4 KiB | 00m00s [283/287] Installing catch2-devel-0:2.1 100% | 234.6 MiB/s | 960.8 KiB | 00m00s [284/287] Installing gulrak-filesystem- 100% | 134.4 MiB/s | 275.2 KiB | 00m00s [285/287] Installing gsl-lite-devel-0:0 100% | 302.8 MiB/s | 310.1 KiB | 00m00s [286/287] Installing highfive-devel-0:2 100% | 124.4 MiB/s | 382.1 KiB | 00m00s [287/287] Installing lexertl14-devel-0: 100% | 2.1 MiB/s | 584.7 KiB | 00m00s >>> Running post-transaction scriptlet: fontconfig-0:2.15.0-4.fc40.aarch64 >>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-4.fc40.aarch64 >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-17.fc41.aarch64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-17.fc41.aarch64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 >>> Running trigger-install scriptlet: glib2-0:2.80.0-1.fc41.aarch64 >>> Stop trigger-install scriptlet: glib2-0:2.80.0-1.fc41.aarch64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.aarch64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.aarch64 Warning: skipped PGP checks for 285 package(s). Finish: build setup for morphio-3.3.9-2.fc41.src.rpm Start: rpmbuild morphio-3.3.9-2.fc41.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1713916800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.HjK4CG + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf MorphIO-3.3.9 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/MorphIO-3.3.9.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd MorphIO-3.3.9 + rm -rf /builddir/build/BUILD/MorphIO-3.3.9-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/MorphIO-3.3.9-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/stop-them-using-a-random-env-var.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/remove-upstreams-flags.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/install-python-shared-object.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/stop-setup.py-from-cmake-build.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pytest-float32.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/use-lib_install_dir.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/allow_use_of_external_ghc_filesystem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/dont_use_cmake_for_finding_ghc_filesystem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + rm -rvf 3rdparty/GSL_LITE removed directory '3rdparty/GSL_LITE' + sed -r -i /GSL_LITE/d MANIFEST.in + sed -r -i '/director.*\(.*(gsl-lite|GSL_LITE).*\)/d' 3rdparty/CMakeLists.txt + sed -r -i -e /TARGET_PROPERTY:gsl-lite,INTERFACE_INCLUDE_DIRECTORIES/d -e 's/PUBLIC[[:blank:]]+gsl-lite[[:blank:]]+(PRIVATE)/\1/' src/CMakeLists.txt + grep -ErIl '#[[:blank:]]*include[[:blank:]]+["<]gsl/gsl[">]' . + xargs -r sed -r -i 's@(#[[:blank:]]*include[[:blank:]]+["<]gsl/gsl)([">])@\1-lite\.hpp\2@' + rm -rvf 3rdparty/lexertl + ln -s /usr/include/lexertl 3rdparty/ + find . -type f -name .gitignore -print -delete ./doc/source/doxygen/.gitignore ./.gitignore + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.RbAjrM + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.3.9 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DEXTERNAL_PYBIND11:BOOL=TRUE -DEXTERNAL_HIGHFIVE:BOOL=TRUE -DEXTERNAL_GHC_FILESYSTEM:BOOL=TRUE -DMORPHIO_USE_DOUBLE:BOOL=TRUE -DBUILD_BINDINGS:BOOL=TRUE -DMorphIO_CXX_WARNINGS:BOOL=FALSE -DMORPHIO_TESTS:BOOL=TRUE -DEXTERNAL_CATCH2:BOOL=TRUE -DMORPHIO_ENABLE_COVERAGE:BOOL=TRUE -DMORPHIO_USE_DOUBLE:BOOL=TRUE -DMORPHIO_VERSION_STRING:STRING=3.3.9 -GNinja -Wno-dev -- The C compiler identification is GNU 14.0.1 -- The CXX compiler identification is GNU 14.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Floating Point Type: double -- HIGHFIVE 2.9.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO) -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.12.1") -- Found Boost: /usr/include (found version "1.83.0") found components: system serialization -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.12.3", minimum required is "3.6") -- Found PythonLibs: /usr/lib64/libpython3.12.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.12.0") -- Performing Test HAVE_fprofile_abs_path -- Performing Test HAVE_fprofile_abs_path - Success CMake Warning at CMake/CodeCoverage.cmake:206 (message): Code coverage results with an optimised (non-Debug) build may be misleading Call Stack (most recent call first): src/CMakeLists.txt:84 (include) -- Warning: this does not have an effect - use NO_SYSTEM_FROM_IMPORTED if using imported targets -- Found Python3: /usr/bin/python3.12 (found version "3.12.3") found components: Interpreter CMake Warning at CMake/CodeCoverage.cmake:206 (message): Code coverage results with an optimised (non-Debug) build may be misleading Call Stack (most recent call first): tests/CMakeLists.txt:42 (include) -- Configuring done (1.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build' Run Build Command(s): /usr/bin/ninja-build -v -j 4 [1/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/enums.cpp.o -MF src/CMakeFiles/morphio_obj.dir/enums.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/enums.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/enums.cpp [2/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -MF src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/endoplasmic_reticulum.cpp [3/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o -MF src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/errorMessages.cpp [4/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o -MF src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/dendritic_spine.cpp [5/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o -MF src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/glial_cell.cpp [6/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS 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tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o -MF tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/tests/test_vasculature_morphology.cpp [61/62] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMORPHIO_USE_DOUBLE -DMPI_NO_CPPBIND -isystem /builddir/build/BUILD/MorphIO-3.3.9/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -MD -MT tests/CMakeFiles/unittests.dir/main.cpp.o -MF tests/CMakeFiles/unittests.dir/main.cpp.o.d -o tests/CMakeFiles/unittests.dir/main.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/tests/main.cpp [62/62] : && /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic tests/CMakeFiles/unittests.dir/main.cpp.o tests/CMakeFiles/unittests.dir/test_collection.cpp.o tests/CMakeFiles/unittests.dir/test_immutable_morphology.cpp.o tests/CMakeFiles/unittests.dir/test_mitochondria.cpp.o tests/CMakeFiles/unittests.dir/test_morphology_readers.cpp.o tests/CMakeFiles/unittests.dir/test_mutable_morphology.cpp.o tests/CMakeFiles/unittests.dir/test_point_utils.cpp.o tests/CMakeFiles/unittests.dir/test_properties.cpp.o tests/CMakeFiles/unittests.dir/test_soma.cpp.o tests/CMakeFiles/unittests.dir/test_swc_reader.cpp.o tests/CMakeFiles/unittests.dir/test_utilities.cpp.o tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o -o /builddir/build/BUILD/MorphIO-3.3.9/bin/unittests src/libmorphio_static.a -lstdc++fs -lhdf5 -lgcov && : + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' /usr/lib/python3.12/site-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. WARNING setuptools_scm._integration.setuptools pyproject.toml does not contain a tool.setuptools_scm section WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' running build running build_py creating build creating build/lib creating build/lib/morphio copying morphio/__init__.py -> build/lib/morphio creating build/lib/morphio/mut copying morphio/mut/__init__.py -> build/lib/morphio/mut creating build/lib/morphio/vasculature copying morphio/vasculature/__init__.py -> build/lib/morphio/vasculature + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.uhzydt + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 ++ dirname /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.3.9 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + DESTDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "" -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/warning_handling.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/version.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vector_types.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc/vasculature.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc/section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc/properties.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc/iterators.hpp -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/types.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/tools.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/soma.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/section_iterators.hpp -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/section_base.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/properties.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/writers.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/soma.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/morphology.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/modifiers.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/mitochondria.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/mito_section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/glial_cell.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/endoplasmic_reticulum.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/dendritic_spine.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/morphology.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mitochondria.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mito_section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/glial_cell.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/exceptions.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/errorMessages.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/enums.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/endoplasmic_reticulum.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/dendritic_spine.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/collection.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/cmake/MorphIO/MorphIOTargets.cmake -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/cmake/MorphIO/MorphIOTargets-noconfig.cmake -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/cmake/MorphIO/MorphIOConfig.cmake -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/libmorphio.so.0.0.0 -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/libmorphio.so -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/_morphio.cpython-312-aarch64-linux-gnu.so + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 --prefix /usr /usr/lib/python3.12/site-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. WARNING setuptools_scm._integration.setuptools pyproject.toml does not contain a tool.setuptools_scm section WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' running install /usr/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() running install_lib creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12 creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature copying build/lib/morphio/vasculature/__init__.py -> /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut copying build/lib/morphio/mut/__init__.py -> /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut copying build/lib/morphio/__init__.py -> /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio byte-compiling /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__init__.py to __init__.cpython-312.pyc writing byte-compilation script '/tmp/tmpdhpwqb_w.py' /usr/bin/python3 /tmp/tmpdhpwqb_w.py removing /tmp/tmpdhpwqb_w.py running install_egg_info running egg_info creating morphio.egg-info writing morphio.egg-info/PKG-INFO writing dependency_links to morphio.egg-info/dependency_links.txt writing requirements to morphio.egg-info/requires.txt writing top-level names to morphio.egg-info/top_level.txt writing manifest file 'morphio.egg-info/SOURCES.txt' reading manifest file 'morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'morphio.egg-info/SOURCES.txt' Copying morphio.egg-info to /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio-3.3.9-py3.12.egg-info running install_scripts + rm -rfv /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/bin/__pycache__ + '[' /usr/lib/python3.12/site-packages '!=' /usr/lib64/python3.12/site-packages ']' + mv -v /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__init__.py /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__pycache__ /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__init__.py' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/__init__.py' renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__pycache__' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/__pycache__' renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/mut' renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/vasculature' + mv -v /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio-3.3.9-py3.12.egg-info /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/ renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio-3.3.9-py3.12.egg-info' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio-3.3.9-py3.12.egg-info' + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.3.9-2.fc41 --unique-debug-suffix -3.3.9-2.fc41.aarch64 --unique-debug-src-base morphio-3.3.9-2.fc41.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/MorphIO-3.3.9 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/morphio-3.3.9-2.fc41.aarch64 628 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.jFejEh + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.3.9 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + /usr/bin/ctest --test-dir redhat-linux-build --output-on-failure --force-new-ctest-process -j4 -VV Internal ctest changing into directory: /builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build UpdateCTestConfiguration from :/builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build/DartConfiguration.tcl Test project /builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: unittests 1: Test command: /builddir/build/BUILD/MorphIO-3.3.9/bin/unittests 1: Working Directory: /builddir/build/BUILD/MorphIO-3.3.9/tests 1: Test timeout computed to be: 10000000 1: 1: data/single_point_root.asc:0:warning 1: Warning: no soma found in file 1: 1: Warning: section 1 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: section 2 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: section 3 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: Skipping an attempt to write an empty morphology. 1: 1: Warning: writing file without a soma 1: 1: Warning: writing soma set to SOMA_UNDEFINED 1: 1: Soma must be stacked cylinders or a point: see https://github.com/BlueBrain/MorphIO/issues/457 1: 1: Three Point Soma: Only one column has the same coordinates. 1: 1: data/h5/v1/Neuron-no-soma.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/single-neurite.h5:0:warning 1: Warning: no soma found in file 1: 1: data/markers.asc:0:warning 1: Warning: no soma found in file 1: 1: data/annotations.asc:0:warning 1: Warning: no soma found in file 1: 1: Warning: section 1 is the only child of section: 0 1: It will be merged with the parent section 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: =============================================================================== 1: All tests passed (444 assertions in 57 test cases) 1: 1/1 Test #1: unittests ........................ Passed 0.06 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.06 sec ++ basename /builddir/build/BUILD/MorphIO-3.3.9 + xdir=MorphIO-3.3.9 + cd .. + k='not test_v2' + k='not test_v2 and not test_neurolucida_markers' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read and not test_dendritic_spine_round_trip_empty_postsynaptic_density' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest MorphIO-3.3.9/tests -k 'not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read and not test_dendritic_spine_round_trip_empty_postsynaptic_density' -v ============================= test session starts ============================== platform linux -- Python 3.12.3, pytest-7.4.3, pluggy-1.3.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/MorphIO-3.3.9 configfile: pyproject.toml collecting ... collected 160 items / 8 deselected / 152 selected MorphIO-3.3.9/tests/test_0_API.py::test_doc_exists PASSED [ 0%] MorphIO-3.3.9/tests/test_0_API.py::test_mut_immut_have_same_methods PASSED [ 1%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_empty_vasculature PASSED [ 1%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_components_vasculature PASSED [ 2%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_section_types PASSED [ 3%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_section_offsets PASSED [ 3%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_section_connectivity PASSED [ 4%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_iterators_vasculature PASSED [ 5%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_from_pathlib PASSED [ 5%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_section___str__ PASSED [ 6%] MorphIO-3.3.9/tests/test_11_collection.py::test_load_from_collection_with_context[collection_path0] PASSED [ 7%] MorphIO-3.3.9/tests/test_11_collection.py::test_load_from_collection_with_context[collection_path1] PASSED [ 7%] MorphIO-3.3.9/tests/test_11_collection.py::test_load_from_collection_without_context[collection_path0] PASSED [ 8%] MorphIO-3.3.9/tests/test_11_collection.py::test_load_from_collection_without_context[collection_path1] PASSED [ 9%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_unordered[collection_path0] PASSED [ 9%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_unordered[collection_path1] PASSED [ 10%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_unordered1[collection_path0] PASSED [ 11%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_unordered1[collection_path1] PASSED [ 11%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_with_warning_handler PASSED [ 12%] MorphIO-3.3.9/tests/test_1_swc.py::test_build_from_string PASSED [ 13%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_single_neurite PASSED [ 13%] MorphIO-3.3.9/tests/test_1_swc.py::test_skip_comments PASSED [ 14%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_simple PASSED [ 15%] MorphIO-3.3.9/tests/test_1_swc.py::test_set_raise_warnings PASSED [ 15%] MorphIO-3.3.9/tests/test_1_swc.py::test_repeated_id PASSED [ 16%] MorphIO-3.3.9/tests/test_1_swc.py::test_neurite_followed_by_soma PASSED [ 17%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_split_soma PASSED [ 17%] MorphIO-3.3.9/tests/test_1_swc.py::test_weird_indent PASSED [ 18%] MorphIO-3.3.9/tests/test_1_swc.py::test_cyclic PASSED [ 19%] MorphIO-3.3.9/tests/test_1_swc.py::test_simple_reversed PASSED [ 19%] MorphIO-3.3.9/tests/test_1_swc.py::test_soma_type_1_point PASSED [ 20%] MorphIO-3.3.9/tests/test_1_swc.py::test_soma_type_2_point PASSED [ 21%] MorphIO-3.3.9/tests/test_1_swc.py::test_soma_type_many_point PASSED [ 21%] MorphIO-3.3.9/tests/test_1_swc.py::test_soma_type_3_point PASSED [ 22%] MorphIO-3.3.9/tests/test_1_swc.py::test_swc_threepoint_soma_tolerance PASSED [ 23%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_weird_ids PASSED [ 23%] MorphIO-3.3.9/tests/test_1_swc.py::test_multiple_soma PASSED [ 24%] MorphIO-3.3.9/tests/test_1_swc.py::test_disconnected_neurite PASSED [ 25%] MorphIO-3.3.9/tests/test_1_swc.py::test_neurite_wrong_root_point PASSED [ 25%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_duplicate PASSED [ 26%] MorphIO-3.3.9/tests/test_1_swc.py::test_unsupported_section_type PASSED [ 26%] MorphIO-3.3.9/tests/test_1_swc.py::test_root_node_split PASSED [ 27%] MorphIO-3.3.9/tests/test_1_swc.py::test_three_point_soma PASSED [ 28%] MorphIO-3.3.9/tests/test_1_swc.py::test_zero_diameter PASSED [ 28%] MorphIO-3.3.9/tests/test_1_swc.py::test_version PASSED [ 29%] MorphIO-3.3.9/tests/test_1_swc.py::test_no_soma PASSED [ 30%] MorphIO-3.3.9/tests/test_1_swc.py::test_WarningHandlerCollector PASSED [ 30%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_soma PASSED [ 31%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_parse_number_with_plus_symbol PASSED [ 32%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_unknown_token PASSED [ 32%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_unfinished_point PASSED [ 33%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_multiple_soma PASSED [ 34%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_single_neurite_no_soma PASSED [ 34%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_skip_header PASSED [ 35%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_read_with_duplicates PASSED [ 36%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_read_without_duplicates PASSED [ 36%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_explicit_duplicates_with_arbitrary_diameter PASSED [ 37%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_unfinished_file PASSED [ 38%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_section_single_point PASSED [ 38%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_single_children PASSED [ 39%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_spine PASSED [ 40%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_single_point_section_duplicate_parent PASSED [ 40%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_single_point_section_duplicate_parent_complex PASSED [ 41%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_spine1 PASSED [ 42%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_markers PASSED [ 42%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_string_markers PASSED [ 43%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_invalid_incomplete PASSED [ 44%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_skip_font PASSED [ 44%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_skip_imagecoord PASSED [ 45%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_Sections_block PASSED [ 46%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_version PASSED [ 46%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_load_from_string PASSED [ 47%] MorphIO-3.3.9/tests/test_3_h5.py::test_v1 PASSED [ 48%] MorphIO-3.3.9/tests/test_3_h5.py::test_wrong_section_type PASSED [ 48%] MorphIO-3.3.9/tests/test_3_h5.py::test_soma_no_neurite PASSED [ 49%] MorphIO-3.3.9/tests/test_3_h5.py::test_single_children PASSED [ 50%] MorphIO-3.3.9/tests/test_4_immut.py::test_heterogeneous_sections PASSED [ 50%] MorphIO-3.3.9/tests/test_4_immut.py::test_components PASSED [ 51%] MorphIO-3.3.9/tests/test_4_immut.py::test_is_root PASSED [ 51%] MorphIO-3.3.9/tests/test_4_immut.py::test_distance PASSED [ 52%] MorphIO-3.3.9/tests/test_4_immut.py::test_iter PASSED [ 53%] MorphIO-3.3.9/tests/test_4_immut.py::test_section_offsets PASSED [ 53%] MorphIO-3.3.9/tests/test_4_immut.py::test_connectivity PASSED [ 54%] MorphIO-3.3.9/tests/test_4_immut.py::test_endoplasmic_reticulum PASSED [ 55%] MorphIO-3.3.9/tests/test_4_immut.py::test_section___str__ PASSED [ 55%] MorphIO-3.3.9/tests/test_4_immut.py::test_section_has_same_shape PASSED [ 56%] MorphIO-3.3.9/tests/test_4_immut.py::test_from_pathlib PASSED [ 57%] MorphIO-3.3.9/tests/test_4_immut.py::test_more_iter PASSED [ 57%] MorphIO-3.3.9/tests/test_4_immut.py::test_glia PASSED [ 58%] MorphIO-3.3.9/tests/test_4_immut.py::test_dendritic_spine PASSED [ 59%] MorphIO-3.3.9/tests/test_4_immut.py::test_dendritic_spine_add_root_section PASSED [ 59%] MorphIO-3.3.9/tests/test_5_mut.py::test_heterogeneous_sections PASSED [ 60%] MorphIO-3.3.9/tests/test_5_mut.py::test_point_level PASSED [ 61%] MorphIO-3.3.9/tests/test_5_mut.py::test_connectivity PASSED [ 61%] MorphIO-3.3.9/tests/test_5_mut.py::test_empty_neurite PASSED [ 62%] MorphIO-3.3.9/tests/test_5_mut.py::test_single_neurite PASSED [ 63%] MorphIO-3.3.9/tests/test_5_mut.py::test_child_section PASSED [ 63%] MorphIO-3.3.9/tests/test_5_mut.py::test_append_no_duplicate PASSED [ 64%] MorphIO-3.3.9/tests/test_5_mut.py::test_mut_copy_ctor PASSED [ 65%] MorphIO-3.3.9/tests/test_5_mut.py::test_build_read_only PASSED [ 65%] MorphIO-3.3.9/tests/test_5_mut.py::test_mutable_immutable_equivalence PASSED [ 66%] MorphIO-3.3.9/tests/test_5_mut.py::test_sections_are_not_dereferenced PASSED [ 67%] MorphIO-3.3.9/tests/test_5_mut.py::test_append_mutable_section PASSED [ 67%] MorphIO-3.3.9/tests/test_5_mut.py::test_iterators PASSED [ 68%] MorphIO-3.3.9/tests/test_5_mut.py::test_non_C_nparray PASSED [ 69%] MorphIO-3.3.9/tests/test_5_mut.py::test_annotation PASSED [ 69%] MorphIO-3.3.9/tests/test_5_mut.py::test_empty_sibling PASSED [ 70%] MorphIO-3.3.9/tests/test_5_mut.py::test_nested_single_child PASSED [ 71%] MorphIO-3.3.9/tests/test_5_mut.py::test_section___str__ PASSED [ 71%] MorphIO-3.3.9/tests/test_5_mut.py::test_from_pathlib PASSED [ 72%] MorphIO-3.3.9/tests/test_5_mut.py::test_endoplasmic_reticulum PASSED [ 73%] MorphIO-3.3.9/tests/test_5_mut.py::test_remove_unifurcations PASSED [ 73%] MorphIO-3.3.9/tests/test_5_mut.py::test_remove_rootsection PASSED [ 74%] MorphIO-3.3.9/tests/test_5_mut.py::test_remove_rootsection_in_loop PASSED [ 75%] MorphIO-3.3.9/tests/test_5_mut.py::test_glia PASSED [ 75%] MorphIO-3.3.9/tests/test_5_mut.py::test_glia_round_trip PASSED [ 76%] MorphIO-3.3.9/tests/test_5_mut.py::test_dendritic_spine PASSED [ 76%] MorphIO-3.3.9/tests/test_5_mut.py::test_dendritic_spine_round_trip PASSED [ 77%] MorphIO-3.3.9/tests/test_5_mut.py::test_lifetime_destroyed_morphology PASSED [ 78%] MorphIO-3.3.9/tests/test_5_mut.py::test_lifetime_access_properties_no_morphology PASSED [ 78%] MorphIO-3.3.9/tests/test_5_mut.py::test_lifetime_copy_single_section PASSED [ 79%] MorphIO-3.3.9/tests/test_5_mut.py::test_lifetime_iteration_fails_with_orphan_section PASSED [ 80%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__maintain_children_order_non_root_section PASSED [ 80%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__maintain_children_order_non_root_section_multiple PASSED [ 81%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__maintain_children_order_root_section PASSED [ 82%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__unifurcation_bridge PASSED [ 82%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__remove_all_children PASSED [ 83%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__append_delete PASSED [ 84%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__traversals PASSED [ 84%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_empty_file PASSED [ 85%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_undefined_soma PASSED [ 86%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_soma_basic PASSED [ 86%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_basic PASSED [ 87%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_merge_only_child_asc_h5 PASSED [ 88%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_merge_only_child_swc PASSED [ 88%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_perimeter PASSED [ 89%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_no_soma PASSED [ 90%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_soma__points_no_diameters PASSED [ 90%] MorphIO-3.3.9/tests/test_6_writers.py::test_duplicate_different_diameter PASSED [ 91%] MorphIO-3.3.9/tests/test_6_writers.py::test_single_point_root_section PASSED [ 92%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_custom_property__throws PASSED [ 92%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_soma_types PASSED [ 93%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_soma_invariants PASSED [ 94%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_no_modifier PASSED [ 94%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_nrn_order PASSED [ 95%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_nrn_order_stability PASSED [ 96%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_two_point_section PASSED [ 96%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_soma_sphere PASSED [ 97%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_no_duplicate PASSED [ 98%] MorphIO-3.3.9/tests/test_8_all_morphologies.py::test_all SKIPPED (ba...) [ 98%] MorphIO-3.3.9/tests/test_9_surfaces.py::test_stacked_cylinder PASSED [ 99%] MorphIO-3.3.9/tests/test_9_surfaces.py::test_contour PASSED [100%] ================= 151 passed, 1 skipped, 8 deselected in 0.67s ================= + RPM_EC=0 ++ jobs -p + exit 0 Processing files: morphio-3.3.9-2.fc41.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.yoWuPE + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + LICENSEDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/LICENSE.txt /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio + RPM_EC=0 ++ jobs -p + exit 0 Provides: libmorphio.so.0.0.0()(64bit) morphio = 3.3.9-2.fc41 morphio(aarch-64) = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.200()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: morphio-devel-3.3.9-2.fc41.aarch64 Provides: cmake(MorphIO) cmake(morphio) morphio-devel = 3.3.9-2.fc41 morphio-devel(aarch-64) = 3.3.9-2.fc41 morphio-static = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: cmake-filesystem(aarch-64) libmorphio.so.0.0.0()(64bit) Processing files: python3-morphio-3.3.9-2.fc41.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.NR8tqu + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + LICENSEDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/python3-morphio + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/python3-morphio + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/LICENSE.txt /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/python3-morphio + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-morphio = 3.3.9-2.fc41 python3-morphio = 3.3.9-2.fc41 python3-morphio(aarch-64) = 3.3.9-2.fc41 python3.12-morphio = 3.3.9-2.fc41 python3.12dist(morphio) = 3.3.9 python3dist(morphio) = 3.3.9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.200()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 python3.12dist(numpy) >= 1.14.1 rtld(GNU_HASH) Processing files: morphio-doc-3.3.9-2.fc41.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.LqEPZo + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + DOCDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/AUTHORS.txt /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/CHANGELOG.md /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/CONTRIBUTING.md /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/README.rst /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/examples /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.EuL9jL + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + LICENSEDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio-doc + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/LICENSE.txt /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: morphio-doc = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: morphio-debugsource-3.3.9-2.fc41.aarch64 Provides: morphio-debugsource = 3.3.9-2.fc41 morphio-debugsource(aarch-64) = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: morphio-debuginfo-3.3.9-2.fc41.aarch64 Provides: debuginfo(build-id) = 6679d6d79438d7e5cf7baa14bbf13dab690c24b9 libmorphio.so.0.0.0-3.3.9-2.fc41.aarch64.debug()(64bit) morphio-debuginfo = 3.3.9-2.fc41 morphio-debuginfo(aarch-64) = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: morphio-debugsource(aarch-64) = 3.3.9-2.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 Wrote: /builddir/build/RPMS/morphio-debugsource-3.3.9-2.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-devel-3.3.9-2.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-doc-3.3.9-2.fc41.noarch.rpm Wrote: /builddir/build/RPMS/morphio-3.3.9-2.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/python3-morphio-3.3.9-2.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-debuginfo-3.3.9-2.fc41.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.l9Jigv + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + /usr/bin/rm -rf /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.NwvzqU + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/MorphIO-3.3.9-SPECPARTS + rm -rf MorphIO-3.3.9 MorphIO-3.3.9.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild morphio-3.3.9-2.fc41.src.rpm Finish: build phase for morphio-3.3.9-2.fc41.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1714927155.801072/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/morphio-3.3.9-2.fc41.src.rpm) Config(child) 2 minutes 15 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "morphio-debugsource", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "morphio", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "python3-morphio", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "morphio-doc", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "noarch" }, { "name": "morphio-debuginfo", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "morphio-devel", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "morphio", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "src" } ] } RPMResults finished