%define packname Biobase %define Rversion 3.4.0 Name: R-%{packname} Version: 2.56.0 Release: 8%{dist} Summary: Base functions for Bioconductor License: Artistic-2.0 URL: http://bioconductor.org/packages/release/bioc/html/Biobase.html Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz BuildRequires: R-devel >= %{Rversion} tex(latex) R-tkWidgets R-BiocGenerics >= 0.27.1 R-utils R-methods %description Base functions for Bioconductor (bioconductor.org). Biobase provides functions that are needed by many other Bioconductor packages or which replace R functions. %description -l fr Bibliothèque contenant des fonctions requises par d'autres bibliothèques ou qui remplacent certaines fonctions dans R %prep %setup -c -q -n %{packname} %build %install rm -rf %{buildroot} mkdir -p %{buildroot}%{_libdir}/R/library %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname} # Clean up in advance of check test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -rf %{buildroot}%{_libdir}/R/library/R.css %check # This library ask for the library ALL which can not be compiled without # R-Biobase #%{_bindir}/R CMD check %{packname} %files %dir %{_libdir}/R/library/%{packname} %{_libdir}/R/library/%{packname}/INDEX %{_libdir}/R/library/%{packname}/Meta/ %{_libdir}/R/library/%{packname}/R/ %{_libdir}/R/library/%{packname}/help/ %{_libdir}/R/library/%{packname}/libs/ %{_libdir}/R/library/%{packname}/NAMESPACE %{_libdir}/R/library/%{packname}/unitTests/ %{_libdir}/R/library/%{packname}/data %{_libdir}/R/library/%{packname}/scripts %{_libdir}/R/library/%{packname}/ExpressionSet %{_libdir}/R/library/%{packname}/CITATION %{_libdir}/R/library/%{packname}/Code %{_libdir}/R/library/%{packname}/extdata %{_libdir}/R/library/%{packname}/testClass.R %{_libdir}/R/library/%{packname}/NEWS %doc %{_libdir}/R/library/%{packname}/doc %{_libdir}/R/library/%{packname}/DESCRIPTION %doc %{_libdir}/R/library/%{packname}/html %changelog * Thu Apr 25 2024 Iñaki Úcar - 2.56.0-8 - R-maint-sig mass rebuild * Sat Apr 20 2024 Miroslav Suchý - 2.56.0-7 - convert license to SPDX * Mon Jan 22 2024 Fedora Release Engineering - 2.56.0-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Fri Jan 19 2024 Fedora Release Engineering - 2.56.0-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Wed Jul 19 2023 Fedora Release Engineering - 2.56.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Fri Apr 21 2023 Iñaki Úcar - 2.56.0-3 - R-maint-sig mass rebuild * Wed Jan 18 2023 Fedora Release Engineering - 2.56.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Fri Sep 2 2022 Tom Callaway - 2.56.0-1 - update to 2.56.0 - rebuild for R 4.2.1 * Wed Jul 20 2022 Fedora Release Engineering - 2.50.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Wed Jan 19 2022 Fedora Release Engineering - 2.50.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild * Wed Jul 21 2021 Fedora Release Engineering - 2.50.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild * Wed Feb 3 2021 Tom Callaway - 2.50.0-1 - update to 2.50.0 * Mon Jan 25 2021 Fedora Release Engineering - 2.48.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild * Mon Jul 27 2020 Fedora Release Engineering - 2.48.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Sun Jun 7 2020 Tom Callaway - 2.48.0-1 - update to 2.48.0 - rebuild for R 4 * Tue Jan 28 2020 Fedora Release Engineering - 2.46.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild * Mon Nov 4 2019 Tom Callaway - 2.46.0-1 - update to 2.46.0 * Mon Aug 12 2019 Elliott Sales de Andrade - 2.40.0-5 - Remove explicit dependencies provided by automatic dependency generator * Wed Jul 24 2019 Fedora Release Engineering - 2.40.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Thu Jan 31 2019 Fedora Release Engineering - 2.40.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Thu Jul 12 2018 Fedora Release Engineering - 2.40.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed May 16 2018 Tom Callaway - 2.40.0-1 - update to 2.40.0 * Wed Feb 07 2018 Fedora Release Engineering - 2.36.2-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Wed Aug 02 2017 Fedora Release Engineering - 2.36.2-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering - 2.36.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Wed May 24 2017 Tom Callaway - 2.36.2-1 - update to 2.36.2 * Fri Feb 10 2017 Fedora Release Engineering - 2.28.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild * Wed Feb 03 2016 Fedora Release Engineering - 2.28.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild * Tue Jun 16 2015 Fedora Release Engineering - 2.28.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild * Wed Jun 3 2015 Tom Callaway - 2.28.0-1 - update to 2.28.0 * Fri Aug 15 2014 Fedora Release Engineering - 2.24.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild * Mon Jun 9 2014 Tom Callaway - 2.24.0-1 - update to 2.24.0 * Fri Jun 06 2014 Fedora Release Engineering - 2.22.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild * Thu May 22 2014 Pierre-Yves Chibon - 2.22.0-2 - Fix the name of the unitTests folder RHBZ#1099885 * Mon Jan 27 2014 pingou 2.22.0-1 - Update to version 2.22.0 * Fri Aug 02 2013 Fedora Release Engineering - 2.20.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild * Tue Jul 16 2013 pingou 2.20.1-1 - Update to version 2.20.1 * Sun Apr 07 2013 pingou 2.20.0-1 - Update to version 2.20.0 * Wed Feb 13 2013 Fedora Release Engineering - 2.18.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild * Tue Nov 27 2012 pingou 2.18.0-1 - Update to version 2.18.0 - + BR: R-BiocGenerics * Wed Jul 18 2012 Fedora Release Engineering - 2.14.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild * Thu Jan 12 2012 Fedora Release Engineering - 2.14.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild * Wed Nov 9 2011 Tom Callaway 2.14.0-2 - rebuild for R 2.14.0 * Thu Nov 03 2011 pingou 2.14.0-1 - Update to version 2.14.0 * Sun Jul 03 2011 pingou 2.12.2-1 - Update to version 2.12.2 * Wed Jun 22 2011 pingou 2.12.1-1 - Update to version 2.12.1 * Mon Feb 07 2011 Fedora Release Engineering - 2.10.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild * Tue Oct 26 2010 pingou 2.10.0-1 - Update to version 2.10.0 * Tue May 11 2010 pingou 2.8.0-1 - Update to version 2.8.0 - Fix url to a more stable form - Fix BR for latex - Remove R on post/postun since there is no post/postun * Thu Dec 17 2009 pingou 2.6.1-1 - Update to 2.6.1 * Sat Nov 21 2009 pingou 2.6.0-1 - Update to 2.6.0 - Remove %%post and %%postun - Adapt %%files to R-2.10.0 * Fri Nov 20 2009 pingou 2.4.1-2 - Rebuild * Fri Jul 24 2009 Fedora Release Engineering - 2.4.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild * Fri Jun 12 2009 pingou 2.4.1-1 - Update to 2.4.1 - Remove bad french translation * Tue Apr 28 2009 pingou 2.4.0-1 - Update to Bioconductor 2.4 and R-2.9.0 * Mon Feb 23 2009 Fedora Release Engineering - 2.2.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild * Wed Feb 18 2009 pingou 2.2.2-1 - New update * Thu Jan 22 2009 pingou 2.2.1-1 - New update * Thu Nov 20 2008 pingou 2.2.0-2 - Correct the Source0 * Mon Oct 27 2008 pingou 2.2.0-1 - Update to version 2.2.0 for R >= 2.8.0 * Wed Jun 25 2008 pingou 2.0.1-1 - Update to version 2.0.1 * Fri May 02 2008 Pingou 2.0.0-1 - Update to bioconductor 2.2 * Tue Feb 19 2008 Fedora Release Engineering - 1.16.1-5 - Autorebuild for GCC 4.3 * Tue Jan 08 2008 Pingou 1.16.1-4 - change on the BR * Sun Nov 18 2007 Pingou 1.16.1-3 - Change on the description * Sun Nov 18 2007 Pingou 1.16.1-2 - Change on the install command - Change on the Requires - Change on the description * Mon Oct 08 2007 Pingou 1.16.1-1 - Update to bioconductor 2.1 * Fri Jul 13 2007 Pingou 1.14.0-4 - Change in the R and BR section to fit the guidelines * Tue Jul 10 2007 Pingou 1.14.0-3 - Change in post and postun to fit the packaging guidelines - Change in prep to fit the guidelines * Mon Jun 24 2007 Pingou 1.14.0-2 - Change de %%doc to avoid redundancy * Thu May 17 2007 Pingou 1.14.0-1 - Submitting to Fedora Extras * Wed Apr 25 2007 Pingou 1.14.0-0.1 - Build of the rpm