Warning: Permanently added '34.238.254.78' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/9884681-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64 Version: 1.6 PID: 8939 Logging PID: 8941 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 9884681, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': '4ed03c637c82a11f23a997f8d7e1bef8dce499f1', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/python3-scipy-1.10.1/bout++', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'bout++', 'package_version': '5.2.0-3', 'project_dirname': 'python3-scipy-1.10.1', 'project_name': 'python3-scipy-1.10.1', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/python3-scipy-1.10.1/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/python3-scipy-1.10.1--https://src.fedoraproject.org/user/davidsch', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/davidsch', 'tags': [], 'task_id': '9884681-fedora-rawhide-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/python3-scipy-1.10.1/bout++ /var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++ --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/python3-scipy-1.10.1/bout++', '/var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++'... Running: git checkout 4ed03c637c82a11f23a997f8d7e1bef8dce499f1 -- cmd: ['git', 'checkout', '4ed03c637c82a11f23a997f8d7e1bef8dce499f1', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++ rc: 0 stdout: stderr: Note: switching to '4ed03c637c82a11f23a997f8d7e1bef8dce499f1'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 4ed03c6 automatic import of bout++ Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++ rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading BOUT++-v5.2.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o BOUT++-v5.2.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/python3-scipy-1.10.1/bout++/BOUT++-v5.2.0.tar.gz/md5/a12adf302b00dbb7d05e4c71cb47c17e/BOUT++-v5.2.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 14.3M 100 14.3M 0 0 336M 0 --:--:-- --:--:-- --:--:-- 342M INFO: Reading stdout from command: md5sum BOUT++-v5.2.0.tar.gz tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1765172247.251471 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.5 starting (python version = 3.13.7, NVR = mock-6.5-1.fc42), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1765172247.251471 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++/bout++.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 6.5 INFO: Mock Version: 6.5 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1765172247.251471/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Tagging container image as mock-bootstrap-bfee76d5-9348-46e3-b104-ed0a6f0fe15e INFO: Checking that 5b8fc87f901ee443b79913ebb1dc2bbdda50afe7adf864fd9776c7bee1358957 image matches host's architecture INFO: Copy content of container 5b8fc87f901ee443b79913ebb1dc2bbdda50afe7adf864fd9776c7bee1358957 to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1765172247.251471/root INFO: mounting 5b8fc87f901ee443b79913ebb1dc2bbdda50afe7adf864fd9776c7bee1358957 with podman image mount INFO: image 5b8fc87f901ee443b79913ebb1dc2bbdda50afe7adf864fd9776c7bee1358957 as /var/lib/containers/storage/overlay/1f566ada12d3ec25f8162ea7f8253603f65d0f167ba13b453e2007f42f3c6eca/merged INFO: umounting image 5b8fc87f901ee443b79913ebb1dc2bbdda50afe7adf864fd9776c7bee1358957 (/var/lib/containers/storage/overlay/1f566ada12d3ec25f8162ea7f8253603f65d0f167ba13b453e2007f42f3c6eca/merged) with podman image umount INFO: Removing image mock-bootstrap-bfee76d5-9348-46e3-b104-ed0a6f0fe15e INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1765172247.251471/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.0-1.fc44.aarch64 rpm-sequoia-1.9.0-2.fc43.aarch64 dnf5-5.3.0.0-3.fc44.aarch64 dnf5-plugins-5.3.0.0-3.fc44.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: Copr repository 100% | 2.3 MiB/s | 307.8 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 22.5 MiB/s | 14.3 MiB | 00m01s fedora 100% | 23.9 MiB/s | 21.8 MiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 0:5.3.0-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.4 MiB bzip2 aarch64 0:1.0.8-21.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 171.3 KiB coreutils aarch64 0:9.9-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.2 MiB cpio aarch64 0:2.15-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB diffutils aarch64 0:3.12-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB fedora-release-common noarch 0:44-0.8 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.8 KiB findutils aarch64 1:4.10.0-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB gawk aarch64 0:5.3.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB glibc-minimal-langpack aarch64 0:2.42.9000-14.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B 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470.2 KiB util-linux aarch64 0:2.41.2-9.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.8 MiB which aarch64 0:2.23-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 123.4 KiB xz aarch64 1:5.8.1-4.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB Installing dependencies: add-determinism aarch64 0:0.7.2-2.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB alternatives aarch64 0:1.33-3.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 90.2 KiB ansible-srpm-macros noarch 0:1-18.1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.7 KiB audit-libs aarch64 0:4.1.2-2.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 486.9 KiB binutils aarch64 0:2.45.50-9.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30.5 MiB build-reproducibility-srpm-macros noarch 0:0.7.2-2.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 KiB 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0:6-5.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.2 KiB elfutils aarch64 0:0.194-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 MiB elfutils-debuginfod-client aarch64 0:0.194-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.0 KiB elfutils-default-yama-scope noarch 0:0.194-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 KiB elfutils-libelf aarch64 0:0.194-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB elfutils-libs aarch64 0:0.194-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 746.7 KiB fedora-gpg-keys noarch 0:44-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 131.2 KiB fedora-release noarch 0:44-0.8 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B fedora-release-identity-basic noarch 0:44-0.8 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 664.0 B fedora-repos noarch 0:44-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.9 KiB fedora-repos-rawhide noarch 0:44-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 KiB file aarch64 0:5.46-8.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 140.2 KiB file-libs aarch64 0:5.46-8.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.9 MiB filesystem aarch64 0:3.18-50.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B filesystem-srpm-macros noarch 0:3.18-50.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.2 KiB fonts-srpm-macros noarch 1:5.0.0-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 55.8 KiB forge-srpm-macros noarch 0:0.4.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.9 KiB fpc-srpm-macros noarch 0:1.3-15.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.0 B gap-srpm-macros noarch 0:2-1.fc44 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB systemd-libs aarch64 0:259~rc2-2.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB systemd-standalone-sysusers aarch64 0:259~rc2-2.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 329.7 KiB tpm2-tss aarch64 0:4.1.3-8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB tree-sitter-srpm-macros noarch 0:0.4.2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.3 KiB util-linux-core aarch64 0:2.41.2-9.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB xxhash-libs aarch64 0:0.8.3-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 86.0 KiB xz-libs aarch64 1:5.8.1-4.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 201.5 KiB zig-srpm-macros noarch 0:1-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip aarch64 0:3.0-44.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 762.5 KiB zlib-ng-compat aarch64 0:2.3.2-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 133.5 KiB zstd aarch64 0:1.5.7-3.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 574.0 KiB Installing groups: Buildsystem building group Transaction Summary: Installing: 177 packages Total size of inbound packages is 64 MiB. Need to download 64 MiB. After this operation, 247 MiB extra will be used (install 247 MiB, remove 0 B). [ 1/177] bzip2-0:1.0.8-21.fc43.aarch64 100% | 621.5 KiB/s | 51.6 KiB | 00m00s [ 2/177] cpio-0:2.15-6.fc43.aarch64 100% | 4.9 MiB/s | 283.0 KiB | 00m00s [ 3/177] coreutils-0:9.9-1.fc44.aarch6 100% | 6.4 MiB/s | 1.1 MiB | 00m00s [ 4/177] diffutils-0:3.12-3.fc43.aarch 100% | 10.6 MiB/s | 381.5 KiB | 00m00s [ 5/177] fedora-release-common-0:44-0. 100% | 1.0 MiB/s | 24.5 KiB | 00m00s [ 6/177] bash-0:5.3.0-2.fc43.aarch64 100% | 9.0 MiB/s | 1.8 MiB | 00m00s [ 7/177] findutils-1:4.10.0-6.fc43.aar 100% | 19.0 MiB/s | 544.0 KiB | 00m00s [ 8/177] glibc-minimal-langpack-0:2.42 100% | 2.5 MiB/s | 67.0 KiB | 00m00s [ 9/177] grep-0:3.12-2.fc43.aarch64 100% | 10.4 MiB/s | 286.2 KiB | 00m00s [ 10/177] gawk-0:5.3.2-2.fc43.aarch64 100% | 23.9 MiB/s | 1.1 MiB | 00m00s [ 11/177] gzip-0:1.14-1.fc44.aarch64 100% | 6.0 MiB/s | 166.5 KiB | 00m00s [ 12/177] info-0:7.2-7.fc44.aarch64 100% | 7.0 MiB/s | 179.5 KiB | 00m00s [ 13/177] patch-0:2.8-2.fc43.aarch64 100% | 4.2 MiB/s | 111.6 KiB | 00m00s [ 14/177] 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49.1 KiB | 00m00s [ 53/177] libarchive-0:3.8.3-1.fc44.aar 100% | 15.0 MiB/s | 413.4 KiB | 00m00s [ 54/177] libstdc++-0:15.2.1-4.fc44.aar 100% | 32.0 MiB/s | 852.3 KiB | 00m00s [ 55/177] pkgconf-pkg-config-0:2.3.0-3. 100% | 383.2 KiB/s | 9.6 KiB | 00m00s [ 56/177] popt-0:1.19-9.fc43.aarch64 100% | 2.4 MiB/s | 58.7 KiB | 00m00s [ 57/177] rpm-0:6.0.0-1.fc44.aarch64 100% | 19.1 MiB/s | 547.2 KiB | 00m00s [ 58/177] rpm-build-libs-0:6.0.0-1.fc44 100% | 4.4 MiB/s | 118.2 KiB | 00m00s [ 59/177] rpm-libs-0:6.0.0-1.fc44.aarch 100% | 14.8 MiB/s | 378.9 KiB | 00m00s [ 60/177] zstd-0:1.5.7-3.fc44.aarch64 100% | 6.9 MiB/s | 182.6 KiB | 00m00s [ 61/177] curl-0:8.17.0-4.fc44.aarch64 100% | 8.6 MiB/s | 229.7 KiB | 00m00s [ 62/177] glibc-gconv-extra-0:2.42.9000 100% | 50.1 MiB/s | 1.7 MiB | 00m00s [ 63/177] ansible-srpm-macros-0:1-18.1. 100% | 796.3 KiB/s | 19.9 KiB | 00m00s [ 64/177] build-reproducibility-srpm-ma 100% | 514.3 KiB/s | 12.9 KiB | 00m00s [ 65/177] dwz-0:0.16-2.fc43.aarch64 100% | 5.4 MiB/s | 132.2 KiB | 00m00s [ 66/177] efi-srpm-macros-0:6-5.fc44.no 100% | 901.1 KiB/s | 22.5 KiB | 00m00s [ 67/177] filesystem-srpm-macros-0:3.18 100% | 1.0 MiB/s | 26.4 KiB | 00m00s [ 68/177] fonts-srpm-macros-1:5.0.0-1.f 100% | 1.2 MiB/s | 27.3 KiB | 00m00s [ 69/177] forge-srpm-macros-0:0.4.0-3.f 100% | 803.6 KiB/s | 20.1 KiB | 00m00s [ 70/177] fpc-srpm-macros-0:1.3-15.fc43 100% | 303.5 KiB/s | 7.9 KiB | 00m00s [ 71/177] gap-srpm-macros-0:2-1.fc44.no 100% | 393.6 KiB/s | 9.1 KiB | 00m00s [ 72/177] ghc-srpm-macros-0:1.9.2-3.fc4 100% | 349.8 KiB/s | 8.7 KiB | 00m00s [ 73/177] gnat-srpm-macros-0:6-8.fc43.n 100% | 339.5 KiB/s | 8.5 KiB | 00m00s [ 74/177] go-srpm-macros-0:3.8.0-1.fc44 100% | 1.2 MiB/s | 28.3 KiB | 00m00s [ 75/177] java-srpm-macros-0:1-7.fc43.n 100% | 305.5 KiB/s | 7.9 KiB | 00m00s [ 76/177] kernel-srpm-macros-0:1.0-27.f 100% | 387.9 KiB/s | 8.9 KiB | 00m00s [ 77/177] lua-srpm-macros-0:1-16.fc43.n 100% | 350.3 KiB/s | 8.8 KiB | 00m00s [ 78/177] ocaml-srpm-macros-0:11-2.fc43 100% | 385.9 KiB/s | 9.3 KiB | 00m00s [ 79/177] openblas-srpm-macros-0:2-20.f 100% | 292.1 KiB/s | 7.6 KiB | 00m00s [ 80/177] package-notes-srpm-macros-0:0 100% | 390.7 KiB/s | 9.0 KiB | 00m00s [ 81/177] perl-srpm-macros-0:1-60.fc43. 100% | 331.6 KiB/s | 8.3 KiB | 00m00s [ 82/177] pyproject-srpm-macros-0:1.18. 100% | 578.8 KiB/s | 13.3 KiB | 00m00s [ 83/177] python-srpm-macros-0:3.14-9.f 100% | 952.3 KiB/s | 23.8 KiB | 00m00s [ 84/177] qt5-srpm-macros-0:5.15.18-1.f 100% | 318.6 KiB/s | 8.6 KiB | 00m00s [ 85/177] qt6-srpm-macros-0:6.10.1-1.fc 100% | 374.3 KiB/s | 9.4 KiB | 00m00s [ 86/177] rust-srpm-macros-0:28.2-1.fc4 100% | 356.9 KiB/s | 10.7 KiB | 00m00s [ 87/177] zig-srpm-macros-0:1-5.fc43.no 100% | 324.4 KiB/s | 8.4 KiB | 00m00s [ 88/177] tree-sitter-srpm-macros-0:0.4 100% | 460.4 KiB/s | 13.4 KiB | 00m00s [ 89/177] zip-0:3.0-44.fc43.aarch64 100% | 9.2 MiB/s | 262.6 KiB | 00m00s [ 90/177] pkgconf-0:2.3.0-3.fc43.aarch6 100% | 1.8 MiB/s | 44.4 KiB | 00m00s [ 91/177] pkgconf-m4-0:2.3.0-3.fc43.noa 100% | 556.4 KiB/s | 13.9 KiB | 00m00s [ 92/177] libpkgconf-0:2.3.0-3.fc43.aar 100% | 1.6 MiB/s | 37.9 KiB | 00m00s [ 93/177] ed-0:1.22.3-1.fc44.aarch64 100% | 3.3 MiB/s | 83.5 KiB | 00m00s [ 94/177] libattr-0:2.5.2-6.fc43.aarch6 100% | 708.8 KiB/s | 17.7 KiB | 00m00s [ 95/177] ncurses-base-0:6.5-7.20250614 100% | 2.6 MiB/s | 63.7 KiB | 00m00s [ 96/177] libsepol-0:3.9-2.fc43.aarch64 100% | 11.3 MiB/s | 323.6 KiB | 00m00s [ 97/177] pcre2-0:10.47-1.fc44.aarch64 100% | 8.6 MiB/s | 246.2 KiB | 00m00s [ 98/177] sqlite-libs-0:3.51.0-1.fc44.a 100% | 28.1 MiB/s | 748.4 KiB | 00m00s [ 99/177] libxml2-0:2.12.10-5.fc44.aarc 100% | 23.7 MiB/s | 678.7 KiB | 00m00s [100/177] libzstd-0:1.5.7-3.fc44.aarch6 100% | 11.6 MiB/s | 332.1 KiB | 00m00s [101/177] lz4-libs-0:1.10.0-3.fc43.aarc 100% | 3.4 MiB/s | 79.5 KiB | 00m00s [102/177] openssl-libs-1:3.5.4-1.fc44.a 100% | 74.2 MiB/s | 2.4 MiB | 00m00s [103/177] glibc-common-0:2.42.9000-14.f 100% | 10.6 MiB/s | 337.8 KiB | 00m00s [104/177] gmp-1:6.3.0-4.fc44.aarch64 100% | 9.8 MiB/s | 271.3 KiB | 00m00s [105/177] mpfr-0:4.2.2-2.fc43.aarch64 100% | 12.6 MiB/s | 322.0 KiB | 00m00s [106/177] file-libs-0:5.46-8.fc44.aarch 100% | 28.6 MiB/s | 848.0 KiB | 00m00s [107/177] fedora-repos-0:44-0.1.noarch 100% | 362.9 KiB/s | 9.1 KiB | 00m00s [108/177] elfutils-debuginfod-client-0: 100% | 2.0 MiB/s | 46.3 KiB | 00m00s [109/177] elfutils-libs-0:0.194-1.fc44. 100% | 10.0 MiB/s | 266.1 KiB | 00m00s [110/177] libcap-0:2.77-1.fc44.aarch64 100% | 3.6 MiB/s | 88.2 KiB | 00m00s [111/177] coreutils-common-0:9.9-1.fc44 100% | 38.5 MiB/s | 2.1 MiB | 00m00s [112/177] add-determinism-0:0.7.2-2.fc4 100% | 25.2 MiB/s | 825.0 KiB | 00m00s [113/177] linkdupes-0:0.7.2-2.fc44.aarc 100% | 13.2 MiB/s | 337.5 KiB | 00m00s [114/177] alternatives-0:1.33-3.fc44.aa 100% | 1.5 MiB/s | 40.3 KiB | 00m00s [115/177] jansson-0:2.14-3.fc43.aarch64 100% | 1.9 MiB/s | 46.7 KiB | 00m00s [116/177] lua-libs-0:5.4.8-4.fc44.aarch 100% | 4.5 MiB/s | 129.2 KiB | 00m00s [117/177] rpm-sequoia-0:1.9.0-2.fc43.aa 100% | 32.1 MiB/s | 887.0 KiB | 00m00s [118/177] libgomp-0:15.2.1-4.fc44.aarch 100% | 13.1 MiB/s | 363.1 KiB | 00m00s [119/177] rpm-sign-libs-0:6.0.0-1.fc44. 100% | 1.1 MiB/s | 27.5 KiB | 00m00s [120/177] pcre2-syntax-0:10.47-1.fc44.n 100% | 6.2 MiB/s | 164.7 KiB | 00m00s [121/177] ca-certificates-0:2025.2.80_v 100% | 32.8 MiB/s | 973.8 KiB | 00m00s [122/177] crypto-policies-0:20251128-1. 100% | 3.0 MiB/s | 74.7 KiB | 00m00s [123/177] fedora-gpg-keys-0:44-0.1.noar 100% | 5.2 MiB/s | 127.7 KiB | 00m00s [124/177] fedora-repos-rawhide-0:44-0.1 100% | 345.9 KiB/s | 8.6 KiB | 00m00s [125/177] elfutils-default-yama-scope-0 100% | 495.0 KiB/s | 12.4 KiB | 00m00s [126/177] json-c-0:0.18-7.fc43.aarch64 100% | 1.8 MiB/s | 45.1 KiB | 00m00s [127/177] gnulib-l10n-0:20241231-1.fc44 100% | 5.6 MiB/s | 143.0 KiB | 00m00s [128/177] libffi-0:3.5.2-1.fc44.aarch64 100% | 1.5 MiB/s | 39.4 KiB | 00m00s [129/177] p11-kit-0:0.25.8-1.fc44.aarch 100% | 18.7 MiB/s | 478.5 KiB | 00m00s [130/177] p11-kit-trust-0:0.25.8-1.fc44 100% | 5.2 MiB/s | 138.6 KiB | 00m00s [131/177] gnupg2-0:2.4.8-4.fc43.aarch64 100% | 50.3 MiB/s | 1.6 MiB | 00m00s [132/177] ima-evm-utils-libs-0:1.6.2-7. 100% | 1.2 MiB/s | 29.4 KiB | 00m00s [133/177] libfsverity-0:1.6-3.fc43.aarc 100% | 714.2 KiB/s | 18.6 KiB | 00m00s [134/177] gpgverify-0:2.2-3.fc43.noarch 100% | 482.8 KiB/s | 11.1 KiB | 00m00s [135/177] libtasn1-0:4.20.0-2.fc43.aarc 100% | 2.9 MiB/s | 73.8 KiB | 00m00s [136/177] tpm2-tss-0:4.1.3-8.fc43.aarch 100% | 14.9 MiB/s | 395.9 KiB | 00m00s [137/177] gnupg2-verify-0:2.4.8-4.fc43. 100% | 6.2 MiB/s | 164.1 KiB | 00m00s [138/177] libassuan-0:2.5.7-4.fc43.aarc 100% | 2.7 MiB/s | 66.5 KiB | 00m00s [139/177] libgcrypt-0:1.11.2-1.fc44.aar 100% | 18.1 MiB/s | 519.6 KiB | 00m00s [140/177] libgpg-error-0:1.56-1.fc44.aa 100% | 9.0 MiB/s | 240.6 KiB | 00m00s [141/177] npth-0:1.8-3.fc43.aarch64 100% | 961.9 KiB/s | 25.0 KiB | 00m00s [142/177] gnupg2-dirmngr-0:2.4.8-4.fc43 100% | 10.0 MiB/s | 266.0 KiB | 00m00s [143/177] gnupg2-gpg-agent-0:2.4.8-4.fc 100% | 10.0 MiB/s | 265.9 KiB | 00m00s [144/177] gnupg2-gpgconf-0:2.4.8-4.fc43 100% | 4.3 MiB/s | 113.9 KiB | 00m00s [145/177] gnupg2-keyboxd-0:2.4.8-4.fc43 100% | 3.7 MiB/s | 91.2 KiB | 00m00s [146/177] libusb1-0:1.0.29-4.fc44.aarch 100% | 2.8 MiB/s | 77.5 KiB | 00m00s [147/177] libksba-0:1.6.7-4.fc43.aarch6 100% | 5.5 MiB/s | 157.5 KiB | 00m00s [148/177] gnutls-0:3.8.11-6.fc44.aarch6 100% | 44.2 MiB/s | 1.3 MiB | 00m00s [149/177] openldap-0:2.6.10-4.fc44.aarc 100% | 9.4 MiB/s | 251.2 KiB | 00m00s [150/177] cyrus-sasl-lib-0:2.1.28-33.fc 100% | 26.0 MiB/s | 773.3 KiB | 00m00s [151/177] libevent-0:2.1.12-16.fc43.aar 100% | 10.3 MiB/s | 253.4 KiB | 00m00s [152/177] libtool-ltdl-0:2.5.4-8.fc44.a 100% | 1.3 MiB/s | 35.6 KiB | 00m00s [153/177] libidn2-0:2.3.8-2.fc43.aarch6 100% | 6.6 MiB/s | 168.7 KiB | 00m00s [154/177] libunistring-0:1.1-10.fc43.aa 100% | 18.8 MiB/s | 539.2 KiB | 00m00s [155/177] nettle-0:3.10.1-2.fc43.aarch6 100% | 16.0 MiB/s | 425.7 KiB | 00m00s [156/177] gdbm-libs-1:1.23-10.fc43.aarc 100% | 2.1 MiB/s | 56.0 KiB | 00m00s [157/177] fedora-release-0:44-0.8.noarc 100% | 579.5 KiB/s | 13.3 KiB | 00m00s [158/177] systemd-standalone-sysusers-0 100% | 5.2 MiB/s | 138.5 KiB | 00m00s [159/177] xxhash-libs-0:0.8.3-3.fc43.aa 100% | 1.3 MiB/s | 34.5 KiB | 00m00s [160/177] gdb-minimal-0:16.3-6.fc44.aar 100% | 96.9 MiB/s | 4.2 MiB | 00m00s [161/177] fedora-release-identity-basic 100% | 542.3 KiB/s | 14.1 KiB | 00m00s [162/177] libcurl-0:8.17.0-4.fc44.aarch 100% | 15.0 MiB/s | 398.4 KiB | 00m00s [163/177] selinux-policy-0:42.19-1.fc44 100% | 2.4 MiB/s | 65.4 KiB | 00m00s [164/177] policycoreutils-0:3.9-5.fc44. 100% | 7.5 MiB/s | 191.9 KiB | 00m00s [165/177] selinux-policy-targeted-0:42. 100% | 122.2 MiB/s | 6.6 MiB | 00m00s [166/177] rpm-plugin-selinux-0:6.0.0-1. 100% | 754.2 KiB/s | 19.6 KiB | 00m00s [167/177] libselinux-utils-0:3.9-5.fc44 100% | 4.4 MiB/s | 113.8 KiB | 00m00s [168/177] libbrotli-0:1.1.0-10.fc44.aar 100% | 11.9 MiB/s | 341.1 KiB | 00m00s [169/177] krb5-libs-0:1.21.3-10.fc44.aa 100% | 23.6 MiB/s | 748.9 KiB | 00m00s [170/177] libnghttp2-0:1.68.0-2.fc44.aa 100% | 2.9 MiB/s | 72.3 KiB | 00m00s [171/177] libpsl-0:0.21.5-6.fc43.aarch6 100% | 2.8 MiB/s | 65.1 KiB | 00m00s [172/177] libssh-0:0.11.3-1.fc44.aarch6 100% | 8.3 MiB/s | 230.6 KiB | 00m00s [173/177] keyutils-libs-0:1.6.3-6.fc43. 100% | 1.2 MiB/s | 31.5 KiB | 00m00s [174/177] libcom_err-0:1.47.3-3.fc44.aa 100% | 1.1 MiB/s | 26.9 KiB | 00m00s [175/177] libverto-0:0.3.2-11.fc43.aarc 100% | 817.1 KiB/s | 20.4 KiB | 00m00s [176/177] libssh-config-0:0.11.3-1.fc44 100% | 396.1 KiB/s | 9.1 KiB | 00m00s [177/177] publicsuffix-list-dafsa-0:202 100% | 2.1 MiB/s | 59.2 KiB | 00m00s -------------------------------------------------------------------------------- [177/177] Total 100% | 36.3 MiB/s | 64.5 MiB | 00m02s Running transaction [ 1/179] Verify package files 100% | 786.0 B/s | 177.0 B | 00m00s [ 2/179] Prepare transaction 100% | 2.2 KiB/s | 177.0 B | 00m00s [ 3/179] Installing libgcc-0:15.2.1-4. 100% | 218.6 MiB/s | 223.9 KiB | 00m00s [ 4/179] Installing publicsuffix-list- 100% | 0.0 B/s | 69.8 KiB | 00m00s [ 5/179] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/179] Installing fedora-release-ide 100% | 0.0 B/s | 920.0 B | 00m00s [ 7/179] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/179] Installing fedora-gpg-keys-0: 100% | 35.0 MiB/s | 179.0 KiB | 00m00s [ 9/179] Installing fedora-repos-0:44- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/179] Installing fedora-release-com 100% | 24.5 MiB/s | 25.1 KiB | 00m00s [ 11/179] Installing fedora-release-0:4 100% | 13.5 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.0-27.fc44.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-27.fc44.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 12/179] Installing setup-0:2.15.0-27. 100% | 44.6 MiB/s | 730.6 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/179] Installing filesystem-0:3.18- 100% | 2.0 MiB/s | 212.8 KiB | 00m00s [ 14/179] Installing gnulib-l10n-0:2024 100% | 129.3 MiB/s | 661.9 KiB | 00m00s [ 15/179] Installing coreutils-common-0 100% | 311.9 MiB/s | 11.2 MiB | 00m00s [ 16/179] Installing pcre2-syntax-0:10. 100% | 138.8 MiB/s | 284.3 KiB | 00m00s [ 17/179] Installing ncurses-base-0:6.5 100% | 57.5 MiB/s | 353.5 KiB | 00m00s [ 18/179] Installing bash-0:5.3.0-2.fc4 100% | 216.1 MiB/s | 8.4 MiB | 00m00s [ 19/179] Installing glibc-common-0:2.4 100% | 63.1 MiB/s | 1.3 MiB | 00m00s [ 20/179] Installing glibc-gconv-extra- 100% | 397.1 MiB/s | 18.7 MiB | 00m00s [ 21/179] Installing glibc-0:2.42.9000- 100% | 155.5 MiB/s | 6.4 MiB | 00m00s [ 22/179] Installing ncurses-libs-0:6.5 100% | 249.5 MiB/s | 1.2 MiB | 00m00s [ 23/179] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 24/179] Installing zlib-ng-compat-0:2 100% | 131.1 MiB/s | 134.3 KiB | 00m00s [ 25/179] Installing bzip2-libs-0:1.0.8 100% | 72.0 MiB/s | 73.8 KiB | 00m00s [ 26/179] Installing libgpg-error-0:1.5 100% | 50.3 MiB/s | 978.5 KiB | 00m00s [ 27/179] Installing libstdc++-0:15.2.1 100% | 354.5 MiB/s | 2.8 MiB | 00m00s [ 28/179] Installing libassuan-0:2.5.7- 100% | 212.6 MiB/s | 217.7 KiB | 00m00s [ 29/179] Installing libgcrypt-0:1.11.2 100% | 298.9 MiB/s | 1.2 MiB | 00m00s [ 30/179] Installing readline-0:8.3-2.f 100% | 276.3 MiB/s | 565.9 KiB | 00m00s [ 31/179] Installing xz-libs-1:5.8.1-4. 100% | 197.9 MiB/s | 202.6 KiB | 00m00s [ 32/179] Installing libuuid-0:2.41.2-9 100% | 68.9 MiB/s | 70.5 KiB | 00m00s [ 33/179] Installing gmp-1:6.3.0-4.fc44 100% | 214.9 MiB/s | 660.2 KiB | 00m00s [ 34/179] Installing popt-0:1.19-9.fc43 100% | 49.3 MiB/s | 151.4 KiB | 00m00s [ 35/179] Installing libzstd-0:1.5.7-3. 100% | 280.5 MiB/s | 861.7 KiB | 00m00s [ 36/179] Installing elfutils-libelf-0: 100% | 286.1 MiB/s | 1.1 MiB | 00m00s [ 37/179] Installing npth-0:1.8-3.fc43. 100% | 92.4 MiB/s | 94.6 KiB | 00m00s [ 38/179] Installing libblkid-0:2.41.2- 100% | 284.6 MiB/s | 291.5 KiB | 00m00s [ 39/179] Installing systemd-libs-0:259 100% | 307.9 MiB/s | 2.5 MiB | 00m00s [ 40/179] Installing libxcrypt-0:4.5.2- 100% | 134.8 MiB/s | 276.1 KiB | 00m00s [ 41/179] Installing libsepol-0:3.9-2.f 100% | 263.9 MiB/s | 810.8 KiB | 00m00s [ 42/179] Installing sqlite-libs-0:3.51 100% | 250.2 MiB/s | 1.5 MiB | 00m00s [ 43/179] Installing gnupg2-gpgconf-0:2 100% | 19.8 MiB/s | 324.0 KiB | 00m00s [ 44/179] Installing libattr-0:2.5.2-6. 100% | 67.8 MiB/s | 69.4 KiB | 00m00s [ 45/179] Installing libacl-0:2.3.2-4.f 100% | 67.2 MiB/s | 68.8 KiB | 00m00s [ 46/179] Installing pcre2-0:10.47-1.fc 100% | 233.0 MiB/s | 715.9 KiB | 00m00s [ 47/179] Installing libselinux-0:3.9-5 100% | 197.6 MiB/s | 202.4 KiB | 00m00s [ 48/179] Installing grep-0:3.12-2.fc43 100% | 51.9 MiB/s | 1.0 MiB | 00m00s [ 49/179] Installing sed-0:4.9-6.fc44.a 100% | 45.3 MiB/s | 881.4 KiB | 00m00s [ 50/179] Installing findutils-1:4.10.0 100% | 87.3 MiB/s | 1.9 MiB | 00m00s [ 51/179] Installing libtasn1-0:4.20.0- 100% | 217.0 MiB/s | 222.2 KiB | 00m00s [ 52/179] Installing libunistring-0:1.1 100% | 291.0 MiB/s | 1.7 MiB | 00m00s [ 53/179] Installing libidn2-0:2.3.8-2. 100% | 50.3 MiB/s | 566.7 KiB | 00m00s [ 54/179] Installing crypto-policies-0: 100% | 22.0 MiB/s | 157.7 KiB | 00m00s [ 55/179] Installing xz-1:5.8.1-4.fc44. 100% | 58.9 MiB/s | 1.4 MiB | 00m00s [ 56/179] Installing libmount-0:2.41.2- 100% | 205.7 MiB/s | 421.3 KiB | 00m00s [ 57/179] Installing gnupg2-verify-0:2. 100% | 22.3 MiB/s | 365.8 KiB | 00m00s [ 58/179] Installing dwz-0:0.16-2.fc43. 100% | 21.1 MiB/s | 324.0 KiB | 00m00s [ 59/179] Installing mpfr-0:4.2.2-2.fc4 100% | 246.5 MiB/s | 757.2 KiB | 00m00s [ 60/179] Installing gawk-0:5.3.2-2.fc4 100% | 112.3 MiB/s | 2.6 MiB | 00m00s [ 61/179] Installing libksba-0:1.6.7-4. 100% | 195.8 MiB/s | 401.0 KiB | 00m00s [ 62/179] Installing unzip-0:6.0-68.fc4 100% | 28.9 MiB/s | 473.8 KiB | 00m00s [ 63/179] Installing file-libs-0:5.46-8 100% | 565.7 MiB/s | 11.9 MiB | 00m00s [ 64/179] Installing file-0:5.46-8.fc44 100% | 9.2 MiB/s | 141.7 KiB | 00m00s [ 65/179] Installing diffutils-0:3.12-3 100% | 77.3 MiB/s | 1.6 MiB | 00m00s [ 66/179] Installing libcap-ng-0:0.8.5- 100% | 159.0 MiB/s | 162.8 KiB | 00m00s [ 67/179] Installing audit-libs-0:4.1.2 100% | 239.1 MiB/s | 489.6 KiB | 00m00s [ 68/179] Installing libsemanage-0:3.9- 100% | 176.7 MiB/s | 361.9 KiB | 00m00s [ 69/179] Installing libsmartcols-0:2.4 100% | 220.4 MiB/s | 225.7 KiB | 00m00s [ 70/179] Installing libeconf-0:0.7.9-2 100% | 80.7 MiB/s | 82.6 KiB | 00m00s [ 71/179] Installing pam-libs-0:1.7.1-3 100% | 220.1 MiB/s | 225.4 KiB | 00m00s [ 72/179] Installing libcap-0:2.77-1.fc 100% | 29.5 MiB/s | 514.0 KiB | 00m00s [ 73/179] Installing alternatives-0:1.3 100% | 6.0 MiB/s | 91.8 KiB | 00m00s [ 74/179] Installing lua-libs-0:5.4.8-4 100% | 161.8 MiB/s | 331.4 KiB | 00m00s [ 75/179] Installing json-c-0:0.18-7.fc 100% | 136.7 MiB/s | 139.9 KiB | 00m00s [ 76/179] Installing libffi-0:3.5.2-1.f 100% | 153.6 MiB/s | 157.3 KiB | 00m00s [ 77/179] Installing p11-kit-0:0.25.8-1 100% | 100.5 MiB/s | 2.5 MiB | 00m00s [ 78/179] Installing p11-kit-trust-0:0. 100% | 20.8 MiB/s | 532.0 KiB | 00m00s [ 79/179] Installing openssl-libs-1:3.5 100% | 296.9 MiB/s | 7.4 MiB | 00m00s [ 80/179] Installing coreutils-0:9.9-1. 100% | 180.2 MiB/s | 8.3 MiB | 00m00s [ 81/179] Installing ca-certificates-0: 100% | 1.5 MiB/s | 2.5 MiB | 00m02s [ 82/179] Installing gzip-0:1.14-1.fc44 100% | 24.0 MiB/s | 443.2 KiB | 00m00s [ 83/179] Installing rpm-sequoia-0:1.9. 100% | 287.9 MiB/s | 2.3 MiB | 00m00s [ 84/179] Installing libfsverity-0:1.6- 100% | 67.8 MiB/s | 69.4 KiB | 00m00s [ 85/179] Installing libevent-0:2.1.12- 100% | 271.3 MiB/s | 1.1 MiB | 00m00s [ 86/179] Installing util-linux-core-0: 100% | 102.7 MiB/s | 2.5 MiB | 00m00s [ 87/179] Installing zip-0:3.0-44.fc43. 100% | 44.0 MiB/s | 766.4 KiB | 00m00s [ 88/179] Installing gnupg2-keyboxd-0:2 100% | 28.6 MiB/s | 234.6 KiB | 00m00s [ 89/179] Installing libpsl-0:0.21.5-6. 100% | 130.5 MiB/s | 133.6 KiB | 00m00s [ 90/179] Installing tar-2:1.35-6.fc43. 100% | 111.3 MiB/s | 3.0 MiB | 00m00s [ 91/179] Installing linkdupes-0:0.7.2- 100% | 44.9 MiB/s | 780.8 KiB | 00m00s [ 92/179] Installing libselinux-utils-0 100% | 71.5 MiB/s | 1.4 MiB | 00m00s [ 93/179] Installing liblastlog2-0:2.41 100% | 19.5 MiB/s | 139.8 KiB | 00m00s [ 94/179] Installing systemd-standalone 100% | 19.0 MiB/s | 330.3 KiB | 00m00s [ 95/179] Installing rpm-libs-0:6.0.0-1 100% | 243.4 MiB/s | 997.0 KiB | 00m00s [ 96/179] Installing libusb1-0:1.0.29-4 100% | 16.0 MiB/s | 180.6 KiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.aarch64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.aarch64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [ 97/179] Installing tpm2-tss-0:4.1.3-8 100% | 269.8 MiB/s | 2.2 MiB | 00m00s [ 98/179] Installing ima-evm-utils-libs 100% | 91.8 MiB/s | 94.0 KiB | 00m00s [ 99/179] Installing gnupg2-gpg-agent-0 100% | 30.8 MiB/s | 851.2 KiB | 00m00s [100/179] Installing libfdisk-0:2.41.2- 100% | 136.7 MiB/s | 419.9 KiB | 00m00s [101/179] Installing util-linux-0:2.41. 100% | 134.5 MiB/s | 6.9 MiB | 00m00s [102/179] Installing policycoreutils-0: 100% | 38.0 MiB/s | 1.3 MiB | 00m00s [103/179] Installing selinux-policy-0:4 100% | 1.1 MiB/s | 33.6 KiB | 00m00s [104/179] Installing selinux-policy-tar 100% | 135.6 MiB/s | 14.9 MiB | 00m00s [105/179] Installing zstd-0:1.5.7-3.fc4 100% | 28.2 MiB/s | 577.6 KiB | 00m00s [106/179] Installing nettle-0:3.10.1-2. 100% | 250.1 MiB/s | 768.4 KiB | 00m00s [107/179] Installing gnutls-0:3.8.11-6. 100% | 302.9 MiB/s | 3.6 MiB | 00m00s [108/179] Installing libxml2-0:2.12.10- 100% | 94.6 MiB/s | 1.9 MiB | 00m00s [109/179] Installing bzip2-0:1.0.8-21.f 100% | 10.7 MiB/s | 175.8 KiB | 00m00s [110/179] Installing add-determinism-0: 100% | 94.3 MiB/s | 2.0 MiB | 00m00s [111/179] Installing build-reproducibil 100% | 0.0 B/s | 1.5 KiB | 00m00s [112/179] Installing cpio-0:2.15-6.fc43 100% | 54.8 MiB/s | 1.1 MiB | 00m00s [113/179] Installing libpkgconf-0:2.3.0 100% | 132.0 MiB/s | 135.1 KiB | 00m00s [114/179] Installing pkgconf-0:2.3.0-3. 100% | 7.5 MiB/s | 114.9 KiB | 00m00s [115/179] Installing ed-0:1.22.3-1.fc44 100% | 10.4 MiB/s | 159.2 KiB | 00m00s [116/179] Installing patch-0:2.8-2.fc43 100% | 16.1 MiB/s | 264.1 KiB | 00m00s [117/179] Installing lz4-libs-0:1.10.0- 100% | 193.9 MiB/s | 198.5 KiB | 00m00s [118/179] Installing libarchive-0:3.8.3 100% | 238.6 MiB/s | 977.2 KiB | 00m00s [119/179] Installing jansson-0:2.14-3.f 100% | 92.3 MiB/s | 94.5 KiB | 00m00s [120/179] Installing libgomp-0:15.2.1-4 100% | 253.1 MiB/s | 518.3 KiB | 00m00s [121/179] Installing libtool-ltdl-0:2.5 100% | 92.9 MiB/s | 95.1 KiB | 00m00s [122/179] Installing gdbm-libs-1:1.23-1 100% | 230.1 MiB/s | 235.6 KiB | 00m00s [123/179] Installing cyrus-sasl-lib-0:2 100% | 105.1 MiB/s | 2.4 MiB | 00m00s [124/179] Installing openldap-0:2.6.10- 100% | 186.9 MiB/s | 765.6 KiB | 00m00s [125/179] Installing gnupg2-dirmngr-0:2 100% | 25.4 MiB/s | 649.1 KiB | 00m00s [126/179] Installing gnupg2-0:2.4.8-4.f 100% | 171.8 MiB/s | 6.5 MiB | 00m00s [127/179] Installing rpm-sign-libs-0:6. 100% | 66.9 MiB/s | 68.5 KiB | 00m00s [128/179] Installing gpgverify-0:2.2-3. 100% | 0.0 B/s | 9.4 KiB | 00m00s [129/179] Installing xxhash-libs-0:0.8. 100% | 85.3 MiB/s | 87.4 KiB | 00m00s [130/179] Installing libbrotli-0:1.1.0- 100% | 222.6 MiB/s | 911.8 KiB | 00m00s [131/179] Installing libnghttp2-0:1.68. 100% | 194.4 MiB/s | 199.1 KiB | 00m00s [132/179] Installing keyutils-libs-0:1. 100% | 97.4 MiB/s | 99.8 KiB | 00m00s [133/179] Installing libcom_err-0:1.47. 100% | 109.7 MiB/s | 112.3 KiB | 00m00s [134/179] Installing libverto-0:0.3.2-1 100% | 69.5 MiB/s | 71.2 KiB | 00m00s [135/179] Installing krb5-libs-0:1.21.3 100% | 253.2 MiB/s | 2.5 MiB | 00m00s [136/179] Installing libssh-0:0.11.3-1. 100% | 191.8 MiB/s | 589.1 KiB | 00m00s [137/179] Installing libcurl-0:8.17.0-4 100% | 223.7 MiB/s | 916.4 KiB | 00m00s [138/179] Installing curl-0:8.17.0-4.fc 100% | 17.3 MiB/s | 460.8 KiB | 00m00s [139/179] Installing rpm-0:6.0.0-1.fc44 100% | 62.6 MiB/s | 2.8 MiB | 00m00s [140/179] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [141/179] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [142/179] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [143/179] Installing tree-sitter-srpm-m 100% | 9.1 MiB/s | 9.3 KiB | 00m00s [144/179] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [145/179] Installing filesystem-srpm-ma 100% | 38.0 MiB/s | 38.9 KiB | 00m00s [146/179] Installing elfutils-default-y 100% | 255.4 KiB/s | 2.0 KiB | 00m00s [147/179] Installing elfutils-libs-0:0. 100% | 182.8 MiB/s | 748.6 KiB | 00m00s [148/179] Installing elfutils-debuginfo 100% | 8.4 MiB/s | 146.3 KiB | 00m00s [149/179] Installing binutils-0:2.45.50 100% | 296.9 MiB/s | 30.6 MiB | 00m00s [150/179] Installing elfutils-0:0.194-1 100% | 128.1 MiB/s | 3.2 MiB | 00m00s [151/179] Installing gdb-minimal-0:16.3 100% | 250.8 MiB/s | 13.0 MiB | 00m00s [152/179] Installing debugedit-0:5.2-3. 100% | 19.6 MiB/s | 321.2 KiB | 00m00s [153/179] Installing rpm-build-libs-0:6 100% | 258.7 MiB/s | 265.0 KiB | 00m00s [154/179] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [155/179] Installing pkgconf-pkg-config 100% | 118.2 KiB/s | 1.8 KiB | 00m00s [156/179] Installing rust-srpm-macros-0 100% | 0.0 B/s | 6.4 KiB | 00m00s [157/179] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [158/179] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [159/179] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [160/179] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [161/179] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [162/179] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [163/179] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [164/179] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [165/179] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [166/179] Installing gap-srpm-macros-0: 100% | 0.0 B/s | 2.7 KiB | 00m00s [167/179] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [168/179] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [169/179] Installing redhat-rpm-config- 100% | 92.7 MiB/s | 189.9 KiB | 00m00s [170/179] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [171/179] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [172/179] Installing go-srpm-macros-0:3 100% | 61.6 MiB/s | 63.0 KiB | 00m00s [173/179] Installing rpm-build-0:6.0.0- 100% | 33.0 MiB/s | 607.9 KiB | 00m00s [174/179] Installing pyproject-srpm-mac 100% | 0.0 B/s | 2.5 KiB | 00m00s [175/179] Installing python-srpm-macros 100% | 51.7 MiB/s | 52.9 KiB | 00m00s [176/179] Installing rpm-plugin-selinux 100% | 67.4 MiB/s | 69.0 KiB | 00m00s [177/179] Installing which-0:2.23-3.fc4 100% | 7.7 MiB/s | 125.6 KiB | 00m00s [178/179] Installing shadow-utils-2:4.1 100% | 118.2 MiB/s | 4.5 MiB | 00m00s [179/179] Installing info-0:7.2-7.fc44. 100% | 46.8 KiB/s | 422.0 KiB | 00m09s Warning: skipped OpenPGP checks for 177 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.7.2-2.fc44.aarch64 alternatives-1.33-3.fc44.aarch64 ansible-srpm-macros-1-18.1.fc43.noarch audit-libs-4.1.2-2.fc44.aarch64 bash-5.3.0-2.fc43.aarch64 binutils-2.45.50-9.fc44.aarch64 build-reproducibility-srpm-macros-0.7.2-2.fc44.noarch bzip2-1.0.8-21.fc43.aarch64 bzip2-libs-1.0.8-21.fc43.aarch64 ca-certificates-2025.2.80_v9.0.304-2.fc44.noarch coreutils-9.9-1.fc44.aarch64 coreutils-common-9.9-1.fc44.aarch64 cpio-2.15-6.fc43.aarch64 crypto-policies-20251128-1.git19878fe.fc44.noarch curl-8.17.0-4.fc44.aarch64 cyrus-sasl-lib-2.1.28-33.fc44.aarch64 debugedit-5.2-3.fc44.aarch64 diffutils-3.12-3.fc43.aarch64 dwz-0.16-2.fc43.aarch64 ed-1.22.3-1.fc44.aarch64 efi-srpm-macros-6-5.fc44.noarch elfutils-0.194-1.fc44.aarch64 elfutils-debuginfod-client-0.194-1.fc44.aarch64 elfutils-default-yama-scope-0.194-1.fc44.noarch elfutils-libelf-0.194-1.fc44.aarch64 elfutils-libs-0.194-1.fc44.aarch64 fedora-gpg-keys-44-0.1.noarch fedora-release-44-0.8.noarch fedora-release-common-44-0.8.noarch fedora-release-identity-basic-44-0.8.noarch fedora-repos-44-0.1.noarch fedora-repos-rawhide-44-0.1.noarch file-5.46-8.fc44.aarch64 file-libs-5.46-8.fc44.aarch64 filesystem-3.18-50.fc43.aarch64 filesystem-srpm-macros-3.18-50.fc43.noarch findutils-4.10.0-6.fc43.aarch64 fonts-srpm-macros-5.0.0-1.fc44.noarch forge-srpm-macros-0.4.0-3.fc43.noarch fpc-srpm-macros-1.3-15.fc43.noarch gap-srpm-macros-2-1.fc44.noarch gawk-5.3.2-2.fc43.aarch64 gdb-minimal-16.3-6.fc44.aarch64 gdbm-libs-1.23-10.fc43.aarch64 ghc-srpm-macros-1.9.2-3.fc43.noarch glibc-2.42.9000-14.fc44.aarch64 glibc-common-2.42.9000-14.fc44.aarch64 glibc-gconv-extra-2.42.9000-14.fc44.aarch64 glibc-minimal-langpack-2.42.9000-14.fc44.aarch64 gmp-6.3.0-4.fc44.aarch64 gnat-srpm-macros-6-8.fc43.noarch gnulib-l10n-20241231-1.fc44.noarch gnupg2-2.4.8-4.fc43.aarch64 gnupg2-dirmngr-2.4.8-4.fc43.aarch64 gnupg2-gpg-agent-2.4.8-4.fc43.aarch64 gnupg2-gpgconf-2.4.8-4.fc43.aarch64 gnupg2-keyboxd-2.4.8-4.fc43.aarch64 gnupg2-verify-2.4.8-4.fc43.aarch64 gnutls-3.8.11-6.fc44.aarch64 go-srpm-macros-3.8.0-1.fc44.noarch gpgverify-2.2-3.fc43.noarch grep-3.12-2.fc43.aarch64 gzip-1.14-1.fc44.aarch64 ima-evm-utils-libs-1.6.2-7.fc44.aarch64 info-7.2-7.fc44.aarch64 jansson-2.14-3.fc43.aarch64 java-srpm-macros-1-7.fc43.noarch json-c-0.18-7.fc43.aarch64 kernel-srpm-macros-1.0-27.fc43.noarch keyutils-libs-1.6.3-6.fc43.aarch64 krb5-libs-1.21.3-10.fc44.aarch64 libacl-2.3.2-4.fc43.aarch64 libarchive-3.8.3-1.fc44.aarch64 libassuan-2.5.7-4.fc43.aarch64 libattr-2.5.2-6.fc43.aarch64 libblkid-2.41.2-9.fc44.aarch64 libbrotli-1.1.0-10.fc44.aarch64 libcap-2.77-1.fc44.aarch64 libcap-ng-0.8.5-8.fc44.aarch64 libcom_err-1.47.3-3.fc44.aarch64 libcurl-8.17.0-4.fc44.aarch64 libeconf-0.7.9-2.fc43.aarch64 libevent-2.1.12-16.fc43.aarch64 libfdisk-2.41.2-9.fc44.aarch64 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readline-8.3-2.fc43.aarch64 redhat-rpm-config-343-16.fc44.noarch rpm-6.0.0-1.fc44.aarch64 rpm-build-6.0.0-1.fc44.aarch64 rpm-build-libs-6.0.0-1.fc44.aarch64 rpm-libs-6.0.0-1.fc44.aarch64 rpm-plugin-selinux-6.0.0-1.fc44.aarch64 rpm-sequoia-1.9.0-2.fc43.aarch64 rpm-sign-libs-6.0.0-1.fc44.aarch64 rust-srpm-macros-28.2-1.fc44.noarch sed-4.9-6.fc44.aarch64 selinux-policy-42.19-1.fc44.noarch selinux-policy-targeted-42.19-1.fc44.noarch setup-2.15.0-27.fc44.noarch shadow-utils-4.18.0-7.fc44.aarch64 sqlite-libs-3.51.0-1.fc44.aarch64 systemd-libs-259~rc2-2.fc44.aarch64 systemd-standalone-sysusers-259~rc2-2.fc44.aarch64 tar-1.35-6.fc43.aarch64 tpm2-tss-4.1.3-8.fc43.aarch64 tree-sitter-srpm-macros-0.4.2-1.fc43.noarch unzip-6.0-68.fc44.aarch64 util-linux-2.41.2-9.fc44.aarch64 util-linux-core-2.41.2-9.fc44.aarch64 which-2.23-3.fc43.aarch64 xxhash-libs-0.8.3-3.fc43.aarch64 xz-5.8.1-4.fc44.aarch64 xz-libs-5.8.1-4.fc44.aarch64 zig-srpm-macros-1-5.fc43.noarch zip-3.0-44.fc43.aarch64 zlib-ng-compat-2.3.2-1.fc44.aarch64 zstd-1.5.7-3.fc44.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 error: No patch number 1 setting SOURCE_DATE_EPOCH=1765152000 Wrote: /builddir/build/SRPMS/bout++-5.2.0-3.fc44.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1765172247.251471/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-lmsj9eq6/bout++/bout++.spec) Config(child) 0 minutes 31 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/bout++-5.2.0-3.fc44.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1765172247.251471/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1765172247.251471/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1765172247.251471/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.0-1.fc44.aarch64 rpm-sequoia-1.9.0-2.fc43.aarch64 dnf5-5.3.0.0-3.fc44.aarch64 dnf5-plugins-5.3.0.0-3.fc44.aarch64 Finish: chroot init Start: build phase for bout++-5.2.0-3.fc44.src.rpm Start: build setup for bout++-5.2.0-3.fc44.src.rpm Building target platforms: aarch64 Building for target aarch64 error: No patch number 1 setting SOURCE_DATE_EPOCH=1765152000 Wrote: /builddir/build/SRPMS/bout++-5.2.0-3.fc44.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 58.9 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 23.6 KiB/s | 1.5 KiB | 00m00s fedora 100% | 43.5 KiB/s | 13.7 KiB | 00m00s Repositories loaded. 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB xml-common noarch 0:0.6.3-67.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB yaksa aarch64 0:0.3-8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.0 MiB zlib-ng aarch64 0:2.3.2-1.fc44 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 149.8 KiB Transaction Summary: Installing: 380 packages Total size of inbound packages is 461 MiB. Need to download 461 MiB. After this operation, 2 GiB extra will be used (install 2 GiB, remove 0 B). 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13.0 MiB/s | 358.7 KiB | 00m00s [347/380] perl-Time-Local-2:1.350-520.f 100% | 1.3 MiB/s | 34.4 KiB | 00m00s [348/380] perl-File-Path-0:2.18-521.fc4 100% | 1.3 MiB/s | 35.0 KiB | 00m00s [349/380] highway-0:1.3.0-1.fc44.aarch6 100% | 6.5 MiB/s | 173.8 KiB | 00m00s [350/380] libopenjph-0:0.25.3-1.fc44.aa 100% | 4.0 MiB/s | 111.0 KiB | 00m00s [351/380] noopenh264-0:2.6.0-2.fc43.aar 100% | 796.8 KiB/s | 22.3 KiB | 00m00s [352/380] perl-Term-ANSIColor-0:5.01-52 100% | 1.8 MiB/s | 47.6 KiB | 00m00s [353/380] perl-Term-Cap-0:1.18-520.fc43 100% | 877.3 KiB/s | 21.9 KiB | 00m00s [354/380] ncurses-0:6.5-7.20250614.fc43 100% | 14.6 MiB/s | 419.8 KiB | 00m00s [355/380] perl-Pod-Escapes-1:1.07-520.f 100% | 791.2 KiB/s | 19.8 KiB | 00m00s [356/380] perl-Text-Tabs+Wrap-0:2024.00 100% | 801.3 KiB/s | 21.6 KiB | 00m00s [357/380] perl-if-0:0.61.000-520.fc43.n 100% | 583.5 KiB/s | 14.0 KiB | 00m00s [358/380] perl-locale-0:1.13-520.fc43.n 100% | 519.4 KiB/s | 13.5 KiB | 00m00s [359/380] perl-AutoLoader-0:5.74-520.fc 100% | 849.8 KiB/s | 21.2 KiB | 00m00s [360/380] perl-IO-Socket-IP-0:0.43-521. 100% | 1.6 MiB/s | 42.1 KiB | 00m00s [361/380] perl-URI-0:5.34-2.fc44.noarch 100% | 5.1 MiB/s | 134.5 KiB | 00m00s [362/380] perl-Data-Dumper-0:2.191-521. 100% | 2.1 MiB/s | 55.0 KiB | 00m00s [363/380] perl-MIME-Base32-0:1.303-24.f 100% | 782.8 KiB/s | 20.4 KiB | 00m00s [364/380] perl-libnet-0:3.15-521.fc43.n 100% | 4.6 MiB/s | 122.8 KiB | 00m00s [365/380] perl-B-0:1.89-520.fc43.aarch6 100% | 6.7 MiB/s | 177.6 KiB | 00m00s [366/380] perl-Digest-MD5-0:2.59-520.fc 100% | 1.3 MiB/s | 35.8 KiB | 00m00s [367/380] perl-FileHandle-0:2.05-520.fc 100% | 596.2 KiB/s | 15.5 KiB | 00m00s [368/380] perl-Digest-0:1.20-520.fc43.n 100% | 991.5 KiB/s | 24.8 KiB | 00m00s [369/380] hdf-libs-0:4.3.0-4.fc43.aarch 100% | 9.9 MiB/s | 274.2 KiB | 00m00s [370/380] libtirpc-0:1.3.7-1.fc44.aarch 100% | 3.5 MiB/s | 93.9 KiB | 00m00s [371/380] python-rpm-macros-0:3.14-9.fc 100% | 852.9 KiB/s | 19.6 KiB | 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libXext-0:1.3.6-4. 100% | 143.7 MiB/s | 147.1 KiB | 00m00s [309/382] Installing cairo-0:1.18.4-2.f 100% | 254.8 MiB/s | 1.8 MiB | 00m00s [310/382] Installing pango-0:1.57.0-1.f 100% | 58.2 MiB/s | 1.2 MiB | 00m00s [311/382] Installing lasi-0:1.1.3-17.fc 100% | 128.8 MiB/s | 131.9 KiB | 00m00s [312/382] Installing python3-cairo-0:1. 100% | 169.3 MiB/s | 520.2 KiB | 00m00s [313/382] Installing poppler-glib-0:25. 100% | 219.2 MiB/s | 673.4 KiB | 00m00s [314/382] Installing cairo-gobject-0:1. 100% | 66.4 MiB/s | 68.0 KiB | 00m00s [315/382] Installing glycin-loaders-0:2 100% | 412.9 MiB/s | 12.0 MiB | 00m00s [316/382] Installing glycin-libs-0:2.0. 100% | 317.9 MiB/s | 4.1 MiB | 00m00s [317/382] Installing gdk-pixbuf2-0:2.44 100% | 89.2 MiB/s | 2.6 MiB | 00m00s [318/382] Installing librsvg2-0:2.61.0- 100% | 306.8 MiB/s | 4.6 MiB | 00m00s [319/382] Installing libXpm-0:3.5.17-6. 100% | 197.1 MiB/s | 201.8 KiB | 00m00s [320/382] Installing gd-0:2.3.3-20.fc44 100% | 221.0 MiB/s | 452.7 KiB | 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MiB/s | 6.8 MiB | 00m00s [334/382] Installing scalapack-mpich-0: 100% | 318.3 MiB/s | 4.5 MiB | 00m00s [335/382] Installing MUMPS-mpich-0:5.7. 100% | 379.8 MiB/s | 8.0 MiB | 00m00s [336/382] Installing hdf5-mpich-devel-0 100% | 351.1 MiB/s | 3.2 MiB | 00m00s [337/382] Installing sundials-mpich-0:7 100% | 328.6 MiB/s | 6.6 MiB | 00m00s [338/382] Installing superlu_dist-mpich 100% | 253.7 MiB/s | 1.3 MiB | 00m00s [339/382] Installing petsc-mpich-0:3.24 100% | 340.6 MiB/s | 23.8 MiB | 00m00s [340/382] Installing libzip-0:1.11.4-2. 100% | 133.7 MiB/s | 136.9 KiB | 00m00s [341/382] Installing netcdf-0:4.9.3-1.f 100% | 120.7 MiB/s | 3.1 MiB | 00m00s [342/382] Installing python3-netcdf4-0: 100% | 266.7 MiB/s | 2.1 MiB | 00m00s [343/382] Installing netcdf-devel-0:4.9 100% | 22.1 MiB/s | 406.6 KiB | 00m00s [344/382] Installing netcdf-cxx4-0:4.3. 100% | 160.7 MiB/s | 329.2 KiB | 00m00s [345/382] Installing ucx-0:1.18.1-3.fc4 100% | 105.9 MiB/s | 2.6 MiB | 00m00s [346/382] Installing 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[359/382] Installing python3-matplotlib 100% | 313.1 MiB/s | 31.9 MiB | 00m00s [360/382] Installing python3-boutdata-0 100% | 50.3 MiB/s | 1.2 MiB | 00m00s [361/382] Installing python3-zoidberg-0 100% | 39.3 MiB/s | 844.1 KiB | 00m00s [362/382] Installing petsc-openmpi-deve 100% | 414.5 MiB/s | 16.6 MiB | 00m00s [363/382] Installing sundials-openmpi-d 100% | 446.3 MiB/s | 30.8 MiB | 00m00s [364/382] Installing netcdf-cxx4-devel- 100% | 23.2 MiB/s | 474.8 KiB | 00m00s [365/382] Installing petsc-mpich-devel- 100% | 412.1 MiB/s | 16.1 MiB | 00m00s [366/382] Installing sundials-mpich-dev 100% | 445.7 MiB/s | 30.8 MiB | 00m00s [367/382] Installing doxygen-2:1.15.0-1 100% | 274.7 MiB/s | 19.5 MiB | 00m00s [368/382] Installing gettext-devel-0:0. 100% | 62.9 MiB/s | 1.4 MiB | 00m00s [369/382] Installing gcc-c++-0:15.2.1-4 100% | 294.4 MiB/s | 38.9 MiB | 00m00s [370/382] Installing annobin-plugin-gcc 100% | 46.2 MiB/s | 709.4 KiB | 00m00s [371/382] Installing gcc-plugin-annobin 100% | 4.1 MiB/s | 70.7 KiB | 00m00s [372/382] Installing python3-tables-0:3 100% | 201.2 MiB/s | 10.5 MiB | 00m00s [373/382] Installing sundials-devel-0:7 100% | 436.6 MiB/s | 29.7 MiB | 00m00s [374/382] Installing python3-sphinx-1:8 100% | 143.2 MiB/s | 12.5 MiB | 00m00s [375/382] Installing python3-devel-0:3. 100% | 64.4 MiB/s | 2.0 MiB | 00m00s [376/382] Installing python3-cython-0:3 100% | 227.6 MiB/s | 19.1 MiB | 00m00s [377/382] Installing flexiblas-devel-0: 100% | 221.8 MiB/s | 6.0 MiB | 00m00s [378/382] Installing fftw-devel-0:3.3.1 100% | 140.7 MiB/s | 288.2 KiB | 00m00s [379/382] Installing fmt-devel-0:11.2.0 100% | 279.9 MiB/s | 573.3 KiB | 00m00s [380/382] Installing mpark-variant-deve 100% | 116.5 MiB/s | 119.3 KiB | 00m00s [381/382] Installing m4-0:1.4.20-3.fc44 100% | 40.3 MiB/s | 865.9 KiB | 00m00s [382/382] Installing chrpath-0:0.16-26. 100% | 169.4 KiB/s | 104.2 KiB | 00m01s Warning: skipped OpenPGP checks for 380 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: build setup for bout++-5.2.0-3.fc44.src.rpm Start: rpmbuild bout++-5.2.0-3.fc44.src.rpm Building target platforms: aarch64 Building for target aarch64 error: No patch number 1 setting SOURCE_DATE_EPOCH=1765152000 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.TIp2y0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.3KCUhF + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd /builddir/build/BUILD/bout++-5.2.0-build + rm -rf BOUT++-v5.2.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BOUT++-v5.2.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd BOUT++-v5.2.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (3188.patch):' Patch #0 (3188.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 --fuzz=0 patching file CMakeLists.txt + sed -e 's/html_theme = "sphinx_book_theme"/html_theme = "sphinxdoc"/' -i manual/sphinx/conf.py + rm -rf externalpackages/mpark.variant/ + mkdir -p externalpackages/mpark.variant/include/ + rm -rf tools/pylib/boutdata + rm -rf tools/pylib/boututils ++ find -L tools/pylib/ -type f ++ grep -v _boutcore_build + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.in + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.cin + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/setup.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/scan_enums.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum_inv.pyx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum.pxd.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/other_enums.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.h.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.cxx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/geninput.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/generate.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_setup.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_helper.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp_openmpi_compat.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.pyx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.cxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutcpp.pxd.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/bout_options.pxd + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/backend.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/Makefile + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/GENERATION.md + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/CMakeLists.txt + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/.gitignore + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/README.md + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/Makefile + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/.gitignore + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.1O32Cd + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0 + export CC=mpicc + CC=mpicc + export CXX=mpicxx + CXX=mpicxx + for mpi in openmpi mpich + mkdir build_openmpi + for mpi in openmpi mpich + mkdir build_mpich + for mpi in openmpi mpich + '[' openmpi = mpich ']' + '[' openmpi = openmpi ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-aarch64 + eval $'MPI_COMPILER=\'openmpi-aarch64\'; export MPI_COMPILER;\nLD_LIBRARY_PATH=\'/usr/lib64/openmpi/lib\'; export LD_LIBRARY_PATH;\nMPI_MAN=\'/usr/share/man/openmpi-aarch64\'; export MPI_MAN;\nMANPATH=\'/usr/share/man/openmpi-aarch64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/openmpi-aarch64\'; export MPI_INCLUDE;\n_LMFILES_=\'/usr/share/modulefiles/mpi/openmpi-aarch64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/openmpi-aarch64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/openmpi\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/openmpi\'; export MPI_PYTHON3_SITEARCH;\nMPI_HOME=\'/usr/lib64/openmpi\'; export MPI_HOME;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/openmpi\'; export MPI_FORTRAN_MOD_DIR;\n__MODULES_LMALTNAME=\'mpi/openmpi-aarch64&as|mpi/default&as|mpi/latest\'; export __MODULES_LMALTNAME;\n__MODULES_LMCONFLICT=\'mpi/openmpi-aarch64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SUFFIX=\'_openmpi\'; export MPI_SUFFIX;\nMPI_SYSCONFIG=\'/etc/openmpi-aarch64\'; export MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_LIB=\'/usr/lib64/openmpi/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/openmpi/bin\'; export MPI_BIN;\ntest 0;' ++ MPI_COMPILER=openmpi-aarch64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-aarch64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-aarch64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-aarch64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-aarch64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-aarch64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-aarch64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-aarch64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=mpicc + export CC + CXX=mpicxx + export CXX + /usr/bin/cmake -S . -B build_openmpi -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/bin -DCMAKE_INSTALL_SBINDIR:PATH=bin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/openmpi-aarch64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.14/site-packages/openmpi -DBOUT_TEST_TIMEOUT=900 -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON -- Configuring BOUT++ version 5.2.1 -- The CXX compiler identification is GNU 15.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python3: /usr/bin/python3.14 (found version "3.14.2") found components: Interpreter -- Could NOT find ClangFormat (missing: ClangFormat_BIN) CMake Warning (dev) at CMakeLists.txt:397 (message): 'src/field/generated_fieldops.cxx' will not be regenerated when you make changes to either 'src/field/gen_fieldops.py' or 'src/field/gen_fieldops.jinja'. This is because either Python3 or clang-format is missing (see above messages for more information) or BOUT_GENERATE_FIELDOPS is OFF (current value: OFF). This warning is only important for BOUT++ developers and can otherwise be safely ignored. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python3: /usr/bin/python3.14 (found suitable version "3.14.2", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- Found Numpy: /usr/include (found version "2.3.5") -- Found Cython: TRUE (found version "3.2.1") -- Found Bash: /usr/bin/bash (found version "5.3.0") -- Building BOUT++ Python interface -- Found MPI_CXX: /usr/lib64/openmpi/bin/mpicxx (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Enable OpenMP: OFF -- HYPRE support: OFF -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0' -- Found PETSc: /usr/include/openmpi-aarch64/petsc -- PETSc support: ON -- Using external mpark.variant -- Using external fmt CMake Deprecation Warning at externalpackages/PVODE/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- PVODE support: ON -- The C compiler identification is GNU 15.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.3") -- Found netCDFCxx version 4.3.1 -- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") -- NetCDF support: ON -- ADIOS2 support: OFF -- Found FFTW: /usr/lib64/libfftw3.so -- FFTW support: ON -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib64/libflexiblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl -- LAPACK support: TRUE -- SLEPc support: OFF -- SUNDIALS support: ON -- Found Gettext: /usr/bin/msgmerge (found version "0.26") -- Found Intl: built in to C library -- libuuid not found, using fallback UUID generator -- UUID_SYSTEM_GENERATOR: FALSE -- Enable coverage: OFF -- Git revision: Unknown -- Performing Test HAS_FLAG__Wnull_dereference -- Performing Test HAS_FLAG__Wnull_dereference - Success -- Warning flag is supported by compiler: -Wnull-dereference -- Found negative flag: -Wno-cast-function-type replaced with -Wcast-function-type -- Performing Test HAS_FLAG__Wno_cast_function_type -- Performing Test HAS_FLAG__Wno_cast_function_type - Success -- Warning flag is supported by compiler: -Wno-cast-function-type -- Runtime checking level: CHECK=2 -- Message stack: BOUT_USE_MSGSTACK=ON -- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF -- Signal handling: BOUT_USE_SIGNAL=ON -- Output coloring: BOUT_USE_COLOR=ON -- Field name tracking: BOUT_USE_TRACK=ON -- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF -- Enable backtrace: BOUT_USE_BACKTRACE=ON -- Performing Test HAS_PRETTY_FUNCTION -- Performing Test HAS_PRETTY_FUNCTION - Success -- Setting build type to 'RelWithDebInfo' as none was specified. -- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE -- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE -- Not building test test-options-adios, requirement not met: BOUT_HAS_ADIOS2 -- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC -- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS -- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE -- Found Doxygen: /usr/bin/doxygen (found version "1.15.0") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build -------------------------------- BOUT++ Configuration Summary -------------------------------- Bundled PVODE support : ON PETSc support : ON SLEPc support : OFF SUNDIALS support : ON HYPRE support : OFF NetCDF support : ON ADIOS2 support : OFF FFTW support : ON LAPACK support : TRUE OpenMP support : OFF Natural language support : ON ScoreP support : OFF System UUID generator : FALSE Extra debug output : OFF Runtime error check level: 2 Signal handling : ON Output coloring : ON Field name tracking : ON Floating point exceptions: OFF Backtrace enabled : ON RAJA enabled : OFF Umpire enabled : OFF Caliper enabled : OFF CUDA enabled : OFF Metric type : 2D Python API support : ON Sanitizers enabled : None === Python === Make sure that the tools/pylib directory is in your PYTHONPATH e.g. by adding to your ~/.bashrc file export PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib:$PYTHONPATH *** Now run `cmake --build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi` to compile BOUT++ *** -- Configuring done (5.1s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: BOUT_TEST_TIMEOUT CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi + /usr/bin/cmake --build build_openmpi -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/mofiles.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 0%] Generating locale/es/libbout.gmo, _mo_file_es [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/es/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/llnlmath.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/es/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/es/libbout.po [ 0%] Generating locale/de/libbout.gmo, _mo_file_de cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/de/ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 429 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 485 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 543 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 565 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 583 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 698 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 714 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 730 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 745 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 761 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 777 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 809 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 824 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 831 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 837 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 850 | #pragma omp parallel for cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/de/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/de/libbout.po [ 2%] Generating locale/fr/libbout.gmo, _mo_file_fr cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/fr/ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable] 189 | N_Vector v, v1, v2; | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable] 533 | integer N, N_global; | ^~~~~~~~ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/fr/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/fr/libbout.po [ 2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_CN/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_CN/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_CN/libbout.po [ 2%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_TW/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_TW/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_TW/libbout.po gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 2%] Built target mofiles [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvspgmr.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable] 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~~~~~~~ [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/iterativ.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvdiag.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized] 328 | for (i=1; i <= krydim; i++) yg[i]=ZERO; | ~~^~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here 161 | int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized] 386 | if (rho < beta) { | ^~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~ In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1826:45, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 1876 | if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp))) | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here 1843 | real del, delp, dcon; | ^~~~ In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1944:28, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1827:41, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) { | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here 1971 | real del, delp, dcon; | ^~~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 82 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ [ 8%] Linking CXX shared library ../../lib/libpvode.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/pvode.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o -Wl,-rpath,::::::::::::::::::::::::::: cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 8%] Built target pvode /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/pvbbdpre.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/band.cpp [ 10%] Linking CXX shared library ../../lib/libpvpre.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/pvpre.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib: ../../lib/libpvode.so.1.0.0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 10%] Built target pvpre /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 10%] Generating bout++-time.cxx /usr/bin/cmake -P /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/cmake/GenerateDateTimeFile.cmake cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 10%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field3d.cxx /usr/lib64/openmpi/bin/mpicxx 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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/coordinates.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 80 | if (mesh->firstY()) { | ~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_factory.hxx:32, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:9, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:437:66: note: declared here 437 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 83 | if (mesh->lastY()) { | ~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:441:65: note: declared here 441 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 473 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 | t); | ~~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_data.hxx:50, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field.hxx:39, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field2d.hxx:35, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_op.hxx:9, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:6: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 517 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 518 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 978 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 1444 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1445 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 2152 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2153 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/coordinates_accessor.cxx [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/data/gridfromfile.cxx [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/difops.cxx [ 45%] Building CXX object 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/generator_context.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 43 | return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:25: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables 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CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/optionsreader.cxx In file included from /usr/include/openmpi-aarch64/ncFile.h:2, from /usr/include/openmpi-aarch64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx:7: /usr/include/openmpi-aarch64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ In file included from /usr/include/openmpi-aarch64/ncFile.h:2, from /usr/include/openmpi-aarch64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx:5: /usr/include/openmpi-aarch64/ncGroup.h:18:14: warning: 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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplace/impls/spt/spt.cxx:68:21: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:75:12: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 75 | data = new T[len]; | ^ /usr/include/c++/15/new: In member function ‘__ct_base ’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ b64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 /usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.2.0 lib/libbout++.so.5.2.0 lib/libbout++.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target bout++ /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Generating resolve_enum.pxd [ 91%] Generating boutcpp.pxd [ 91%] Generating helper.cxx [ 94%] Generating boutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutcpp.pxd cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/resolve_enum.pxd cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py boutpp.pyx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py helper.cxx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.cxx [ 94%] Generating helper.h cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py helper.h.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.h [ 94%] Generating libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/python3.14 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True warning: resolve_enum.pxd:49:21: 'deflt' redeclared warning: resolve_enum.pxd:189:24: 'Standard' redeclared warning: resolve_enum.pxd:223:15: 'Standard' redeclared performance hint: libboutpp.pyx:2149:0: Exception check on 'callback' will always require the GIL to be acquired. Possible solutions: 1. Declare 'callback' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'callback' to allow an error code to be returned. cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o [ 94%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_aarch64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_aarch64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_aarch64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.cxx In file included from /usr/include/python3.14/pyconfig.h:6, from /usr/include/python3.14/Python.h:14, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx:2: /usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined 2007 | #define _POSIX_C_SOURCE 200809L | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/aarch64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/15/aarch64-redhat-linux/bits/c++config.h:727, from /usr/include/c++/15/bits/version.h:51, from /usr/include/c++/15/compare:38, from /usr/include/c++/15/array:40, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boutexception.hxx:6, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx:1: /usr/include/features.h:319:10: note: this is the location of the previous definition 319 | # define _POSIX_C_SOURCE 202405L | ^~~~~~~~~~~~~~~ /usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined 2043 | #define _XOPEN_SOURCE 700 | ^~~~~~~~~~~~~ /usr/include/features.h:234:10: note: this is the location of the previous definition 234 | # define _XOPEN_SOURCE 800 | ^~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:37683:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function] 37683 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX shared library libboutpp.cpython-314-aarch64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-314-aarch64-linux-gnu.so -o libboutpp.cpython-314-aarch64-linux-gnu.so "CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib: ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 97%] Built target boutpp.cpython-314-aarch64-linux-gnu /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target boutpp gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 + PYPA= + LDPA=/usr/lib64/openmpi/lib ++ pwd + export PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/ + PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/ ++ pwd + export LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib/ + LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib/ + /usr/bin/cmake --build build_openmpi/manual -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual//CMakeFiles/progress.marks cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/gmake -f CMakeFiles/Makefile2 manual/all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs Running Sphinx v8.2.3 breathe module not installed recommonmark module not installed loading translations [en]... done making output directory... done Converting `source_suffix = ['.rst', '.md']` to `source_suffix = {'.rst': 'restructuredtext', '.md': 'restructuredtext'}`. building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 48 source files that are out of date updating environment: [new config] 48 added, 0 changed, 0 removed reading sources... [ 2%] _apidoc/boutdata reading sources... [ 4%] _apidoc/boutpp reading sources... [ 6%] _apidoc/boututils No mlab available reading sources... [ 8%] _apidoc/zoidberg reading sources... [ 10%] api_reference reading sources... [ 12%] developer_docs/code_layout reading sources... [ 15%] developer_docs/contributing reading sources... [ 17%] developer_docs/data_types reading sources... [ 19%] developer_docs/debugging reading sources... [ 21%] developer_docs/file_io reading sources... [ 23%] developer_docs/git_basics reading sources... [ 25%] developer_docs/mesh reading sources... [ 27%] developer_docs/natural_language reading sources... [ 29%] developer_docs/performance_profiling reading sources... [ 31%] developer_docs/petsc_interface reading sources... [ 33%] index reading sources... [ 35%] user_docs/BOUT_Gradperp_op reading sources... [ 38%] user_docs/adios2 reading sources... [ 40%] user_docs/advanced_install reading sources... [ 42%] user_docs/algebraic_operators reading sources... [ 44%] user_docs/boundary_options reading sources... [ 46%] user_docs/bout_functions_for_physics reading sources... [ 48%] user_docs/bout_options reading sources... [ 50%] user_docs/coordinates reading sources... [ 52%] user_docs/differential_operators reading sources... [ 54%] user_docs/eigenvalue_solver reading sources... [ 56%] user_docs/gpu_support reading sources... [ 58%] user_docs/input_grids reading sources... [ 60%] user_docs/installing reading sources... [ 62%] user_docs/introduction reading sources... [ 65%] user_docs/invertable_operator reading sources... [ 67%] user_docs/laplacian reading sources... [ 69%] user_docs/makefiles reading sources... [ 71%] user_docs/new_in_v5 reading sources... [ 73%] user_docs/nonlocal reading sources... [ 75%] user_docs/output_and_post reading sources... [ 77%] user_docs/parallel-transforms reading sources... [ 79%] user_docs/petsc reading sources... [ 81%] user_docs/physics_models reading sources... [ 83%] user_docs/preconditioning reading sources... [ 85%] user_docs/python reading sources... [ 88%] user_docs/python_boutpp reading sources... [ 90%] user_docs/quickstart reading sources... [ 92%] user_docs/running_bout reading sources... [ 94%] user_docs/staggered_grids reading sources... [ 96%] user_docs/testing reading sources... [ 98%] user_docs/time_integration reading sources... [100%] user_docs/variable_init WARNING: autodoc: failed to import module 'cbdtoeqdsk' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.cbdtoeqdsk'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them WARNING: autodoc: failed to import module 'gen_surface' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.gen_surface'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'input' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.input'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.mayavi2'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] WARNING: autodoc: failed to import module 'settings' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.settings'\n"] [autodoc.import_object] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.Laplacian:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.PhysicsModel:14: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.create3D:3: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.Laplacian:6: ERROR: Unknown target name: "abla". [docutils] WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.analyse_equil_2'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/anim.py", line 19, in \n from tvtk.tools import visual\n', "ModuleNotFoundError: No module named 'tvtk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'ask' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.ask'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/boutgrid.py", line 3, in \n from tvtk.api import tvtk\n', "ModuleNotFoundError: No module named 'tvtk'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation. [docutils] WARNING: autodoc: failed to import module 'closest_line' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.closest_line'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.crosslines'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.efit_analyzer'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.fft_deriv'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'file_import' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.file_import'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'geqdsk' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.geqdsk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'idl_tabulate' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.idl_tabulate'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/int_func.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'local_min_max' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.local_min_max'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/mode_structure.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/moment_xyzt.py", line 2, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'options' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.options'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.radial_grid'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'read_geqdsk' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.read_geqdsk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'spectrogram' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/spectrogram.py", line 10, in \n from scipy import fftpack, pi\n', "ImportError: cannot import name 'pi' from 'scipy' (/usr/lib64/python3.14/site-packages/scipy/__init__.py)\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/surface_average.py", line 5, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/volume_integral.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'watch' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.watch'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.DommaschkPotentials:3: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse:3: ERROR: Unexpected indentation. [docutils] looking for now-outdated files... /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse.coil:3: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py". [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/performance_profiling.rst:85: WARNING: Inline literal start-string without end-string. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced. [ref.footnote] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:406: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:407: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /usr/lib/python3.14/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray:1: WARNING: duplicate object description of boutdata.BoutArray, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.dims_from_type:1: WARNING: duplicate object description of boutdata.BoutArray.dims_from_type, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.get_dims_type:1: WARNING: duplicate object description of boutdata.BoutArray.get_dims_type, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.type_from_dims:1: WARNING: duplicate object description of boutdata.BoutArray.type_from_dims, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutwarnings.alwayswarn:1: WARNING: duplicate object description of boutdata.alwayswarn, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.build_and_log:1: WARNING: duplicate object description of boutdata.build_and_log, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.determineNumberOfCPUs:1: WARNING: duplicate object description of boutdata.determineNumberOfCPUs, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.launch:1: WARNING: duplicate object description of boutdata.launch, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.launch_safe:1: WARNING: duplicate object description of boutdata.launch_safe, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.shell:1: WARNING: duplicate object description of boutdata.shell, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.shell_safe:1: WARNING: duplicate object description of boutdata.shell_safe, other instance in _apidoc/boutdata, use :no-index: for one of them /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/running_bout.rst:462: WARNING: Literal block expected; none found. [docutils] none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'repository_url' given WARNING: unsupported theme option 'repository_branch' given WARNING: unsupported theme option 'path_to_docs' given WARNING: unsupported theme option 'use_edit_page_button' given WARNING: unsupported theme option 'use_repository_button' given WARNING: unsupported theme option 'use_issues_button' given WARNING: unsupported theme option 'home_page_in_toc' given done copying assets... copying static files... Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/_static/language_data.js Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/_static/documentation_options.js Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/_static/basic.css Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/_static/sphinxdoc.css copying static files: done copying extra files... copying extra files: done copying assets: done writing output... [ 2%] _apidoc/boutdata writing output... [ 4%] _apidoc/boutpp writing output... [ 6%] _apidoc/boututils writing output... [ 8%] _apidoc/zoidberg writing output... [ 10%] api_reference writing output... [ 12%] developer_docs/code_layout writing output... [ 15%] developer_docs/contributing writing output... [ 17%] developer_docs/data_types writing output... [ 19%] developer_docs/debugging writing output... [ 21%] developer_docs/file_io writing output... [ 23%] developer_docs/git_basics writing output... [ 25%] developer_docs/mesh writing output... [ 27%] developer_docs/natural_language writing output... [ 29%] developer_docs/performance_profiling writing output... [ 31%] developer_docs/petsc_interface writing output... [ 33%] index writing output... [ 35%] user_docs/BOUT_Gradperp_op writing output... [ 38%] user_docs/adios2 writing output... [ 40%] user_docs/advanced_install writing output... [ 42%] user_docs/algebraic_operators writing output... [ 44%] user_docs/boundary_options writing output... [ 46%] user_docs/bout_functions_for_physics writing output... [ 48%] user_docs/bout_options writing output... [ 50%] user_docs/coordinates writing output... [ 52%] user_docs/differential_operators writing output... [ 54%] user_docs/eigenvalue_solver writing output... [ 56%] user_docs/gpu_support writing output... [ 58%] user_docs/input_grids writing output... [ 60%] user_docs/installing writing output... [ 62%] user_docs/introduction writing output... [ 65%] user_docs/invertable_operator writing output... [ 67%] user_docs/laplacian writing output... [ 69%] user_docs/makefiles writing output... [ 71%] user_docs/new_in_v5 writing output... [ 73%] user_docs/nonlocal writing output... [ 75%] user_docs/output_and_post writing output... [ 77%] user_docs/parallel-transforms writing output... [ 79%] user_docs/petsc writing output... [ 81%] user_docs/physics_models writing output... [ 83%] user_docs/preconditioning writing output... [ 85%] user_docs/python writing output... [ 88%] user_docs/python_boutpp writing output... [ 90%] user_docs/quickstart writing output... [ 92%] user_docs/running_bout writing output... [ 94%] user_docs/staggered_grids writing output... [ 96%] user_docs/testing writing output... [ 98%] user_docs/time_integration writing output... [100%] user_docs/variable_init /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx' [ref.doc] 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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx' [ref.doc] 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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '>' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '<' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' [ref.doc] generating indices... /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/output_and_post.rst:580: WARNING: Lexing literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica" resulted in an error at token: '$'. Retrying in relaxed mode. 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The HTML pages are in docs. cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/index.html Generated HTML docs in file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/index.html gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target sphinx-html /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target docs gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 + export LD_LIBRARY_PATH=/usr/lib64/openmpi/lib + LD_LIBRARY_PATH=/usr/lib64/openmpi/lib + export PYTHONPATH= + PYTHONPATH= + '[' openmpi = mpich ']' + '[' openmpi = openmpi ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-aarch64 + eval $'unset MPI_COMPILER;\nunset LD_LIBRARY_PATH;\nunset MPI_MAN;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_HOME;\nunset MPI_FORTRAN_MOD_DIR;\nunset __MODULES_LMALTNAME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SUFFIX;\nunset MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-aarch64 + eval $'LD_LIBRARY_PATH=\'/usr/lib64/mpich/lib\'; export LD_LIBRARY_PATH;\nMPI_COMPILER=\'mpich-aarch64\'; export MPI_COMPILER;\nMANPATH=\'/usr/share/man/mpich-aarch64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/mpich-aarch64\'; export MPI_INCLUDE;\nMPI_MAN=\'/usr/share/man/mpich-aarch64\'; export MPI_MAN;\nMPI_PYTHON_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON_SITEARCH;\n_LMFILES_=\'/usr/share/modulefiles/mpi/mpich-aarch64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/mpich-aarch64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/mpich\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/mpich\'; export MPI_PYTHON3_SITEARCH;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/mpich\'; export MPI_FORTRAN_MOD_DIR;\nMPI_HOME=\'/usr/lib64/mpich\'; export MPI_HOME;\n__MODULES_LMCONFLICT=\'mpi/mpich-aarch64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SYSCONFIG=\'/etc/mpich-aarch64\'; export MPI_SYSCONFIG;\nMPI_SUFFIX=\'_mpich\'; export MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_PYTHON2_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON2_SITEARCH;\nMPI_LIB=\'/usr/lib64/mpich/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/mpich/bin\'; export MPI_BIN;\ntest 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-aarch64 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-aarch64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-aarch64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-aarch64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-aarch64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-aarch64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/mpich ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-aarch64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-aarch64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=mpicc + export CC + CXX=mpicxx + export CXX + /usr/bin/cmake -S . -B build_mpich -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/bin -DCMAKE_INSTALL_SBINDIR:PATH=bin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/mpich-aarch64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.14/site-packages/mpich -DBOUT_TEST_TIMEOUT=900 -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON -- Configuring BOUT++ version 5.2.1 -- The CXX compiler identification is GNU 15.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python3: /usr/bin/python3.14 (found version "3.14.2") found components: Interpreter -- Could NOT find ClangFormat (missing: ClangFormat_BIN) CMake Warning (dev) at CMakeLists.txt:397 (message): 'src/field/generated_fieldops.cxx' will not be regenerated when you make changes to either 'src/field/gen_fieldops.py' or 'src/field/gen_fieldops.jinja'. This is because either Python3 or clang-format is missing (see above messages for more information) or BOUT_GENERATE_FIELDOPS is OFF (current value: OFF). This warning is only important for BOUT++ developers and can otherwise be safely ignored. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python3: /usr/bin/python3.14 (found suitable version "3.14.2", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- Found Numpy: /usr/include (found version "2.3.5") -- Found Cython: TRUE (found version "3.2.1") -- Found Bash: /usr/bin/bash (found version "5.3.0") -- Building BOUT++ Python interface -- Found MPI_CXX: /usr/lib64/mpich/bin/mpicxx (found version "4.1") -- Found MPI: TRUE (found version "4.1") -- Enable OpenMP: OFF -- HYPRE support: OFF -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0' -- Found PETSc: /usr/include/mpich-aarch64/petsc -- PETSc support: ON -- Using external mpark.variant -- Using external fmt CMake Deprecation Warning at externalpackages/PVODE/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- PVODE support: ON -- The C compiler identification is GNU 15.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/lib64/mpich/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.3") -- Found netCDFCxx version 4.3.1 -- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") -- NetCDF support: ON -- ADIOS2 support: OFF -- Found FFTW: /usr/lib64/libfftw3.so -- FFTW support: ON -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib64/libflexiblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl -- LAPACK support: TRUE -- SLEPc support: OFF -- SUNDIALS support: ON -- Found Gettext: /usr/bin/msgmerge (found version "0.26") -- Found Intl: built in to C library -- libuuid not found, using fallback UUID generator -- UUID_SYSTEM_GENERATOR: FALSE -- Enable coverage: OFF -- Git revision: Unknown -- Performing Test HAS_FLAG__Wnull_dereference -- Performing Test HAS_FLAG__Wnull_dereference - Success -- Warning flag is supported by compiler: -Wnull-dereference -- Found negative flag: -Wno-cast-function-type replaced with -Wcast-function-type -- Performing Test HAS_FLAG__Wno_cast_function_type -- Performing Test HAS_FLAG__Wno_cast_function_type - Success -- Warning flag is supported by compiler: -Wno-cast-function-type -- Runtime checking level: CHECK=2 -- Message stack: BOUT_USE_MSGSTACK=ON -- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF -- Signal handling: BOUT_USE_SIGNAL=ON -- Output coloring: BOUT_USE_COLOR=ON -- Field name tracking: BOUT_USE_TRACK=ON -- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF -- Enable backtrace: BOUT_USE_BACKTRACE=ON -- Performing Test HAS_PRETTY_FUNCTION -- Performing Test HAS_PRETTY_FUNCTION - Success -- Setting build type to 'RelWithDebInfo' as none was specified. -- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE -- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE -- Not building test test-options-adios, requirement not met: BOUT_HAS_ADIOS2 -- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC -- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS -- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE -- Found Doxygen: /usr/bin/doxygen (found version "1.15.0") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build -------------------------------- BOUT++ Configuration Summary -------------------------------- Bundled PVODE support : ON PETSc support : ON SLEPc support : OFF SUNDIALS support : ON HYPRE support : OFF NetCDF support : ON ADIOS2 support : OFF FFTW support : ON LAPACK support : TRUE OpenMP support : OFF Natural language support : ON ScoreP support : OFF System UUID generator : FALSE Extra debug output : OFF Runtime error check level: 2 Signal handling : ON Output coloring : ON Field name tracking : ON Floating point exceptions: OFF Backtrace enabled : ON RAJA enabled : OFF Umpire enabled : OFF Caliper enabled : OFF CUDA enabled : OFF Metric type : 2D Python API support : ON Sanitizers enabled : None === Python === Make sure that the tools/pylib directory is in your PYTHONPATH e.g. by adding to your ~/.bashrc file export PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib:$PYTHONPATH *** Now run `cmake --build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich` to compile BOUT++ *** -- Configuring done (6.6s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: BOUT_TEST_TIMEOUT CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich + /usr/bin/cmake --build build_mpich -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/mofiles.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 2%] Generating locale/de/libbout.gmo, _mo_file_de [ 2%] Generating locale/es/libbout.gmo, _mo_file_es [ 2%] Generating locale/fr/libbout.gmo, _mo_file_fr [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/es/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/fr/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/de/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/fr/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/fr/libbout.po cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/es/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/es/libbout.po cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/de/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/de/libbout.po [ 2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/llnlmath.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_CN/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_CN/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_CN/libbout.po [ 2%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_TW/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_TW/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_TW/libbout.po gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 2%] Built target mofiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 429 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 485 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 543 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 565 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 583 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 698 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 714 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 730 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 745 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 761 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 777 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 809 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 824 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 831 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 837 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 850 | #pragma omp parallel for [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvspgmr.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable] 189 | N_Vector v, v1, v2; | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable] 533 | integer N, N_global; | ^~~~~~~~ [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/iterativ.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvdiag.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable] 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~~~~~~~ In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1826:45, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 1876 | if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp))) | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here 1843 | real del, delp, dcon; | ^~~~ In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1944:28, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1827:41, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) { | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here 1971 | real del, delp, dcon; | ^~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized] 328 | for (i=1; i <= krydim; i++) yg[i]=ZERO; | ~~^~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here 161 | int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized] 386 | if (rho < beta) { | ^~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 82 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ [ 8%] Linking CXX shared library ../../lib/libpvode.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/pvode.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o -Wl,-rpath,::::::::::::::::::::::::: cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 8%] Built target pvode /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/pvbbdpre.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/band.cpp [ 10%] Linking CXX shared library ../../lib/libpvpre.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/pvpre.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib: ../../lib/libpvode.so.1.0.0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 10%] Built target pvpre /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 10%] Generating bout++-time.cxx /usr/bin/cmake -P /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/cmake/GenerateDateTimeFile.cmake cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 13%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field.cxx /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/bout++.cxx /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field2d.cxx /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field3d.cxx [ 16%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_data.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_data.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_data.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/field/field_data.cxx [ 16%] Building CXX object CMakeFiles/bout++.dir/src/field/field_factory.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/pardiv/impls/cyclic/pardiv_cyclic.cxx [ 40%] Building CXX object CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/pardiv/invert_pardiv.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/pardiv/invert_pardiv.cxx [ 40%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_factory.cxx [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_region.cxx [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/coordinates.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 80 | if (mesh->firstY()) { | ~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_factory.hxx:32, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:9, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:437:66: note: declared here 437 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 83 | if (mesh->lastY()) { | ~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:441:65: note: declared here 441 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 473 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 | t); | ~~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_data.hxx:50, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field.hxx:39, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field2d.hxx:35, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_op.hxx:9, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:6: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 517 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 518 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 978 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 1444 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1445 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 2152 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2153 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/generator_context.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 43 | return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:25: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options.cxx [ 83%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_ini.cxx [ 83%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx [ 86%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx [ 86%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_adios.cxx [ 86%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/optionsreader.cxx In file included from /usr/include/mpich-aarch64/ncFile.h:2, from /usr/include/mpich-aarch64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx:7: /usr/include/mpich-aarch64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ In file included from /usr/include/mpich-aarch64/ncFile.h:2, from /usr/include/mpich-aarch64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx:5: /usr/include/mpich-aarch64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | 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CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o" CMakeFiles/bout++.dir/src/solver/solver.cxx.o CMakeFiles/bout++.dir/src/sys/adios_object.cxx.o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o CMakeFiles/bout++.dir/src/sys/options.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o CMakeFiles/bout++.dir/src/sys/output.cxx.o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o CMakeFiles/bout++.dir/src/sys/range.cxx.o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib: /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/libfmt.so.11.2.0 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf.so /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/In member function ‘__ct ’, inlined from ‘_Construct’ at /usr/include/c++/15/bits/stl_construct.h:133:7, inlined from ‘construct’ at /usr/include/c++/15/bits/alloc_traits.h:805:19, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr_base.h:606:39, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr_base.h:969:16, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr_base.h:1719:14, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr.h:463:59, inlined from ‘make_shared’ at /usr/include/c++/15/bits/shared_ptr.h:1008:39, inlined from ‘get’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:428:38, inlined from ‘reallocate’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:226:14, inlined from ‘__ct_base ’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplace/impls/spt/spt.cxx:68:21: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:75:12: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 75 | data = new T[len]; | ^ /usr/include/c++/15/new: In member function ‘__ct_base ’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 /usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.2.0 lib/libbout++.so.5.2.0 lib/libbout++.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target bout++ /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Generating boutcpp.pxd [ 94%] Generating boutpp.pyx [ 94%] Generating resolve_enum.pxd [ 94%] Generating helper.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/resolve_enum.pxd cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py boutpp.pyx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py helper.cxx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutcpp.pxd [ 94%] Generating helper.h cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py helper.h.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.h [ 94%] Generating libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/python3.14 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True warning: resolve_enum.pxd:49:21: 'deflt' redeclared warning: resolve_enum.pxd:189:24: 'Standard' redeclared warning: resolve_enum.pxd:223:15: 'Standard' redeclared performance hint: libboutpp.pyx:2149:0: Exception check on 'callback' will always require the GIL to be acquired. Possible solutions: 1. Declare 'callback' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'callback' to allow an error code to be returned. cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_aarch64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_aarch64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_aarch64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx In file included from /usr/include/python3.14/pyconfig.h:6, from /usr/include/python3.14/Python.h:14, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx:2: /usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined 2007 | #define _POSIX_C_SOURCE 200809L | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/aarch64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/15/aarch64-redhat-linux/bits/c++config.h:727, from /usr/include/c++/15/bits/version.h:51, from /usr/include/c++/15/compare:38, from /usr/include/c++/15/array:40, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boutexception.hxx:6, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx:1: /usr/include/features.h:319:10: note: this is the location of the previous definition 319 | # define _POSIX_C_SOURCE 202405L | ^~~~~~~~~~~~~~~ /usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined 2043 | #define _XOPEN_SOURCE 700 | ^~~~~~~~~~~~~ /usr/include/features.h:234:10: note: this is the location of the previous definition 234 | # define _XOPEN_SOURCE 800 | ^~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:37683:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function] 37683 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX shared library libboutpp.cpython-314-aarch64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-314-aarch64-linux-gnu.so -o libboutpp.cpython-314-aarch64-linux-gnu.so "CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/boutexception_helper.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib: ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 97%] Built target boutpp.cpython-314-aarch64-linux-gnu /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target boutpp gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 + PYPA= + LDPA=/usr/lib64/mpich/lib ++ pwd + export PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/ + PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/ ++ pwd + export LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib/ + LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib/ + /usr/bin/cmake --build build_mpich/manual -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual//CMakeFiles/progress.marks cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/gmake -f CMakeFiles/Makefile2 manual/all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs Running Sphinx v8.2.3 breathe module not installed recommonmark module not installed loading translations [en]... done making output directory... done Converting `source_suffix = ['.rst', '.md']` to `source_suffix = {'.rst': 'restructuredtext', '.md': 'restructuredtext'}`. building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 48 source files that are out of date updating environment: [new config] 48 added, 0 changed, 0 removed reading sources... [ 2%] _apidoc/boutdata reading sources... [ 4%] _apidoc/boutpp reading sources... [ 6%] _apidoc/boututils No mlab available reading sources... [ 8%] _apidoc/zoidberg reading sources... [ 10%] api_reference reading sources... [ 12%] developer_docs/code_layout reading sources... [ 15%] developer_docs/contributing reading sources... [ 17%] developer_docs/data_types reading sources... [ 19%] developer_docs/debugging reading sources... [ 21%] developer_docs/file_io reading sources... [ 23%] developer_docs/git_basics reading sources... [ 25%] developer_docs/mesh reading sources... [ 27%] developer_docs/natural_language reading sources... [ 29%] developer_docs/performance_profiling reading sources... [ 31%] developer_docs/petsc_interface reading sources... [ 33%] index reading sources... [ 35%] user_docs/BOUT_Gradperp_op reading sources... [ 38%] user_docs/adios2 reading sources... [ 40%] user_docs/advanced_install reading sources... [ 42%] user_docs/algebraic_operators reading sources... [ 44%] user_docs/boundary_options reading sources... [ 46%] user_docs/bout_functions_for_physics reading sources... [ 48%] user_docs/bout_options reading sources... [ 50%] user_docs/coordinates reading sources... [ 52%] user_docs/differential_operators reading sources... [ 54%] user_docs/eigenvalue_solver reading sources... [ 56%] user_docs/gpu_support reading sources... [ 58%] user_docs/input_grids reading sources... [ 60%] user_docs/installing reading sources... [ 62%] user_docs/introduction reading sources... [ 65%] user_docs/invertable_operator reading sources... [ 67%] user_docs/laplacian reading sources... [ 69%] user_docs/makefiles reading sources... [ 71%] user_docs/new_in_v5 reading sources... [ 73%] user_docs/nonlocal reading sources... [ 75%] user_docs/output_and_post reading sources... [ 77%] user_docs/parallel-transforms reading sources... [ 79%] user_docs/petsc reading sources... [ 81%] user_docs/physics_models reading sources... [ 83%] user_docs/preconditioning reading sources... [ 85%] user_docs/python reading sources... [ 88%] user_docs/python_boutpp reading sources... [ 90%] user_docs/quickstart reading sources... [ 92%] user_docs/running_bout reading sources... [ 94%] user_docs/staggered_grids reading sources... [ 96%] user_docs/testing reading sources... [ 98%] user_docs/time_integration reading sources... [100%] user_docs/variable_init WARNING: autodoc: failed to import module 'cbdtoeqdsk' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.cbdtoeqdsk'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them WARNING: autodoc: failed to import module 'gen_surface' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.gen_surface'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'input' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.input'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.mayavi2'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] WARNING: autodoc: failed to import module 'settings' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.settings'\n"] [autodoc.import_object] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.Laplacian:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.PhysicsModel:14: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.create3D:3: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.Laplacian:6: ERROR: Unknown target name: "abla". [docutils] WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.analyse_equil_2'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/anim.py", line 19, in \n from tvtk.tools import visual\n', "ModuleNotFoundError: No module named 'tvtk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'ask' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.ask'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/boutgrid.py", line 3, in \n from tvtk.api import tvtk\n', "ModuleNotFoundError: No module named 'tvtk'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation. [docutils] WARNING: autodoc: failed to import module 'closest_line' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.closest_line'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.crosslines'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.efit_analyzer'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.fft_deriv'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'file_import' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.file_import'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'geqdsk' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.geqdsk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'idl_tabulate' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.idl_tabulate'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/int_func.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'local_min_max' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.local_min_max'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/mode_structure.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/moment_xyzt.py", line 2, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'options' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.options'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.radial_grid'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'read_geqdsk' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.read_geqdsk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'spectrogram' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/spectrogram.py", line 10, in \n from scipy import fftpack, pi\n', "ImportError: cannot import name 'pi' from 'scipy' (/usr/lib64/python3.14/site-packages/scipy/__init__.py)\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/surface_average.py", line 5, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/volume_integral.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'watch' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.watch'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.DommaschkPotentials:3: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse:3: ERROR: Unexpected indentation. [docutils] looking for now-outdated files... /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse.coil:3: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py". [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/performance_profiling.rst:85: WARNING: Inline literal start-string without end-string. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced. [ref.footnote] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:406: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:407: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /usr/lib/python3.14/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray:1: WARNING: duplicate object description of boutdata.BoutArray, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.dims_from_type:1: WARNING: duplicate object description of boutdata.BoutArray.dims_from_type, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.get_dims_type:1: WARNING: duplicate object description of boutdata.BoutArray.get_dims_type, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.type_from_dims:1: WARNING: duplicate object description of boutdata.BoutArray.type_from_dims, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutwarnings.alwayswarn:1: WARNING: duplicate object description of boutdata.alwayswarn, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.build_and_log:1: WARNING: duplicate object description of boutdata.build_and_log, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.determineNumberOfCPUs:1: WARNING: duplicate object description of boutdata.determineNumberOfCPUs, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.launch:1: WARNING: duplicate object description of boutdata.launch, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.launch_safe:1: WARNING: duplicate object description of boutdata.launch_safe, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.shell:1: WARNING: duplicate object description of boutdata.shell, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.shell_safe:1: WARNING: duplicate object description of boutdata.shell_safe, other instance in _apidoc/boutdata, use :no-index: for one of them /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/running_bout.rst:462: WARNING: Literal block expected; none found. [docutils] none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'repository_url' given WARNING: unsupported theme option 'repository_branch' given WARNING: unsupported theme option 'path_to_docs' given WARNING: unsupported theme option 'use_edit_page_button' given WARNING: unsupported theme option 'use_repository_button' given WARNING: unsupported theme option 'use_issues_button' given WARNING: unsupported theme option 'home_page_in_toc' given done copying assets... copying static files... Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/_static/language_data.js Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/_static/documentation_options.js Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/_static/basic.css Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/_static/sphinxdoc.css copying static files: done copying extra files... copying extra files: done copying assets: done writing output... [ 2%] _apidoc/boutdata writing output... [ 4%] _apidoc/boutpp writing output... [ 6%] _apidoc/boututils writing output... [ 8%] _apidoc/zoidberg writing output... [ 10%] api_reference writing output... [ 12%] developer_docs/code_layout writing output... [ 15%] developer_docs/contributing writing output... [ 17%] developer_docs/data_types writing output... [ 19%] developer_docs/debugging writing output... [ 21%] developer_docs/file_io writing output... [ 23%] developer_docs/git_basics writing output... [ 25%] developer_docs/mesh writing output... [ 27%] developer_docs/natural_language writing output... [ 29%] developer_docs/performance_profiling writing output... [ 31%] developer_docs/petsc_interface writing output... [ 33%] index writing output... [ 35%] user_docs/BOUT_Gradperp_op writing output... [ 38%] user_docs/adios2 writing output... [ 40%] user_docs/advanced_install writing output... [ 42%] user_docs/algebraic_operators writing output... [ 44%] user_docs/boundary_options writing output... [ 46%] user_docs/bout_functions_for_physics writing output... [ 48%] user_docs/bout_options writing output... [ 50%] user_docs/coordinates writing output... [ 52%] user_docs/differential_operators writing output... [ 54%] user_docs/eigenvalue_solver writing output... [ 56%] user_docs/gpu_support writing output... [ 58%] user_docs/input_grids writing output... [ 60%] user_docs/installing writing output... [ 62%] user_docs/introduction writing output... [ 65%] user_docs/invertable_operator writing output... [ 67%] user_docs/laplacian writing output... [ 69%] user_docs/makefiles writing output... [ 71%] user_docs/new_in_v5 writing output... [ 73%] user_docs/nonlocal writing output... [ 75%] user_docs/output_and_post writing output... [ 77%] user_docs/parallel-transforms writing output... [ 79%] user_docs/petsc writing output... [ 81%] user_docs/physics_models writing output... [ 83%] user_docs/preconditioning writing output... [ 85%] user_docs/python writing output... [ 88%] user_docs/python_boutpp writing output... [ 90%] user_docs/quickstart writing output... [ 92%] user_docs/running_bout writing output... [ 94%] user_docs/staggered_grids writing output... [ 96%] user_docs/testing writing output... [ 98%] user_docs/time_integration writing output... [100%] user_docs/variable_init /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:146: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:185: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '>' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '<' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/output_and_post.rst:580: WARNING: Lexing literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica" resulted in an error at token: '$'. Retrying in relaxed mode. [misc.highlighting_failure] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/physics_models.rst:31: WARNING: undefined label: 'sec-cmake' [ref.ref] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/time_integration.rst:1087: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] generating indices... genindex py-modindex done writing additional pages... search done copying images... [ 4%] figs/layout1.png copying images... [ 8%] figs/layout2.png copying images... [ 12%] figs/memory.png copying images... [ 15%] figs/petsc_interface_overview.png copying images... [ 19%] figs/operator_stencil_uml.png copying images... [ 23%] figs/petsc_vector_set.png copying images... [ 27%] figs/fluid_norm_mc.png copying images... [ 31%] figs/diffStencils.png copying images... [ 35%] figs/topology_cross_section.svg copying images... [ 38%] figs/topology_schematic.svg copying images... 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The HTML pages are in docs. cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/index.html Generated HTML docs in file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/index.html gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target sphinx-html /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target docs gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 + export LD_LIBRARY_PATH=/usr/lib64/mpich/lib + LD_LIBRARY_PATH=/usr/lib64/mpich/lib + export PYTHONPATH= + PYTHONPATH= + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-aarch64 + eval $'unset LD_LIBRARY_PATH;\nunset MPI_COMPILER;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset MPI_MAN;\nunset MPI_PYTHON_SITEARCH;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_FORTRAN_MOD_DIR;\nunset MPI_HOME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SYSCONFIG;\nunset MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_PYTHON2_SITEARCH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.xU7PVG + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + '[' /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/bout++-5.2.0-build + mkdir /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0 + for mpi in openmpi mpich + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-aarch64 + eval $'MPI_COMPILER=\'openmpi-aarch64\'; export MPI_COMPILER;\nLD_LIBRARY_PATH=\'/usr/lib64/openmpi/lib\'; export LD_LIBRARY_PATH;\nMPI_MAN=\'/usr/share/man/openmpi-aarch64\'; export MPI_MAN;\nMANPATH=\'/usr/share/man/openmpi-aarch64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/openmpi-aarch64\'; export MPI_INCLUDE;\n_LMFILES_=\'/usr/share/modulefiles/mpi/openmpi-aarch64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/openmpi-aarch64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/openmpi\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/openmpi\'; export MPI_PYTHON3_SITEARCH;\nMPI_HOME=\'/usr/lib64/openmpi\'; export MPI_HOME;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/openmpi\'; export MPI_FORTRAN_MOD_DIR;\n__MODULES_LMALTNAME=\'mpi/openmpi-aarch64&as|mpi/default&as|mpi/latest\'; export __MODULES_LMALTNAME;\n__MODULES_LMCONFLICT=\'mpi/openmpi-aarch64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SUFFIX=\'_openmpi\'; export MPI_SUFFIX;\nMPI_SYSCONFIG=\'/etc/openmpi-aarch64\'; export MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_LIB=\'/usr/lib64/openmpi/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/openmpi/bin\'; export MPI_BIN;\ntest 0;' ++ MPI_COMPILER=openmpi-aarch64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-aarch64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-aarch64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-aarch64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-aarch64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-aarch64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-aarch64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-aarch64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + /usr/bin/cmake --install build_openmpi -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutpp/__init__.py -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so.1.0.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so.1.0.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/vector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/spgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/smalldense.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/pvbbdpre.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/nvector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/llnltyps.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/llnlmath.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/iterativ.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/cvspgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/cvode.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/cvdiag.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/pvode/band.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/PVODE/PVODEConfig.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/PVODE/PVODEConfig-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/es/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/fr/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.2.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.2.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/where.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/vector3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/vector2d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/vecops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/utils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/unused.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/stencils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/sourcex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/smoothing.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/parallel_boundary_region.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/parallel_boundary_op.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/output.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/optionsreader.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/options.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/multiostream.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/msg_stack.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/mask.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/lapack_routines.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/invert_parderiv.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/invert_laplace.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/interpolation_z.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/interpolation_xz.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/interpolation.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/initialprofiles.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/gyro_average.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-aarch64/bout++/globals.hxx -- Installing: 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++ grep -E '/libbout|/libpvode|/libpvpre' + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib 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Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc/zoidberg.rst.txt -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc/boututils.rst.txt -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc/boutpp.rst.txt -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_sources/_apidoc/boutdata.rst.txt + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-aarch64 + eval $'unset MPI_COMPILER;\nunset LD_LIBRARY_PATH;\nunset MPI_MAN;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_HOME;\nunset MPI_FORTRAN_MOD_DIR;\nunset __MODULES_LMALTNAME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SUFFIX;\nunset MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-aarch64 + eval $'LD_LIBRARY_PATH=\'/usr/lib64/mpich/lib\'; export LD_LIBRARY_PATH;\nMPI_COMPILER=\'mpich-aarch64\'; export MPI_COMPILER;\nMANPATH=\'/usr/share/man/mpich-aarch64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/mpich-aarch64\'; export MPI_INCLUDE;\nMPI_MAN=\'/usr/share/man/mpich-aarch64\'; export MPI_MAN;\nMPI_PYTHON_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON_SITEARCH;\n_LMFILES_=\'/usr/share/modulefiles/mpi/mpich-aarch64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/mpich-aarch64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/mpich\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/mpich\'; export MPI_PYTHON3_SITEARCH;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/mpich\'; export MPI_FORTRAN_MOD_DIR;\nMPI_HOME=\'/usr/lib64/mpich\'; export MPI_HOME;\n__MODULES_LMCONFLICT=\'mpi/mpich-aarch64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SYSCONFIG=\'/etc/mpich-aarch64\'; export MPI_SYSCONFIG;\nMPI_SUFFIX=\'_mpich\'; export MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_PYTHON2_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON2_SITEARCH;\nMPI_LIB=\'/usr/lib64/mpich/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/mpich/bin\'; export MPI_BIN;\ntest 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-aarch64 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-aarch64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-aarch64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-aarch64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-aarch64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-aarch64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/mpich ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-aarch64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-aarch64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + /usr/bin/cmake --install build_mpich -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutpp/__init__.py -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so.1.0.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so.1.0.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/vector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/spgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/smalldense.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/pvbbdpre.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/nvector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/llnltyps.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/llnlmath.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/iterativ.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/cvspgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/cvode.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/cvdiag.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/pvode/band.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/PVODE/PVODEConfig.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/PVODE/PVODEConfig-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/es/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/fr/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so.5.2.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so.5.2.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/where.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/vector3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/vector2d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/vecops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/utils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/unused.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/stencils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/sourcex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/smoothing.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/parallel_boundary_region.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/parallel_boundary_op.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/output.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/optionsreader.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/options.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/multiostream.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/msg_stack.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/mask.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/lapack_routines.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/invert_parderiv.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/invert_laplace.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/interpolation_z.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/interpolation_xz.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/interpolation.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/initialprofiles.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-aarch64/bout++/gyro_average.hxx -- Installing: 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/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-v5-factory-upgrader.py -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-stop-script -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-sonnet -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-log-color -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-changelog-generator.py -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-build-deps.sh -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-boutdata-restart-create -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-archive-helper.sh -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-add-mod-path -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/bin/bout-config -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutconfig/__init__.py -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++Targets.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++Targets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++ConfigVersion.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/BOUT++functions.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/CorrectWindowsPaths.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindClangFormat.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindFFTW.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindHYPRE.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindnetCDF.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindnetCDFCxx.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindPackageMultipass.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindLibuuid.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindPETSc.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindScoreP.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindSLEPc.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindSUNDIALS.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/FindSphinx.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/ResolveCompilerPaths.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++Config.cmake ++ find /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/mpich ++ grep -E '/libbout|/libpvode|/libpvpre' + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so: new RUNPATH: /usr/lib64/mpich/lib + rm -rf /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/bout++ + mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/modulefiles/bout++ + cat + DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + /usr/bin/cmake --install build_mpich/manual -- Install configuration: "RelWithDebInfo" -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++/ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//objects.inv -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//searchindex.js -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/init_balloon.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/stagLocations.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/quickstart_conduction_example.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/sod_result.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/interchange_inst_test.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/snb-step.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/snb-sinusoidal.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/par_laplace.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilGlobalIndices.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMatrix.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMeshWithStencil.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/5PointStencilMesh.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/poincare.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/elliptic_grid.png -- Up-to-date: 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/etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-aarch64 + eval $'unset LD_LIBRARY_PATH;\nunset MPI_COMPILER;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset MPI_MAN;\nunset MPI_PYTHON_SITEARCH;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_FORTRAN_MOD_DIR;\nunset MPI_HOME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SYSCONFIG;\nunset MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_PYTHON2_SITEARCH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + /usr/lib/rpm/find-lang.sh /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT libbout + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 5.2.0-3.fc44 --unique-debug-suffix -5.2.0-3.fc44.aarch64 --unique-debug-src-base bout++-5.2.0-3.fc44.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 find-debuginfo: starting Extracting debug info from 8 files DWARF-compressing 8 files sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/bout++-5.2.0-3.fc44.aarch64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + COMPRESS='gzip -9 -n' + COMPRESS_EXT=.gz + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/mpich/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/mpich/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/update_citations.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/update_version_number_in_files.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/openmpi/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/openmpi/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/update_citations.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/update_version_number_in_files.py from /usr/bin/env python3 to #!/usr/bin/python3 + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.14 using python3.14 Bytecompiling .py files below /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14 using python3.14 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-det --brp -j4 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutconfig/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutpp/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutpp/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutconfig/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents Scanned 170 directories and 888 files, processed 55 inodes, 4 modified (0 replaced + 4 rewritten), 0 unsupported format, 0 errors + /usr/bin/linkdupes --brp /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr Scanned 169 directories and 888 files, considered 882 files, read 531 files, linked 311 files, 0 errors sum of sizes of linked files: 6170574 bytes Reading /builddir/build/BUILD/bout++-5.2.0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.TyziSQ + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0 + for mpi in openmpi mpich + fail=1 + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-aarch64 + eval $'MPI_COMPILER=\'openmpi-aarch64\'; export MPI_COMPILER;\nLD_LIBRARY_PATH=\'/usr/lib64/openmpi/lib\'; export LD_LIBRARY_PATH;\nMPI_MAN=\'/usr/share/man/openmpi-aarch64\'; export MPI_MAN;\nMANPATH=\'/usr/share/man/openmpi-aarch64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/openmpi-aarch64\'; export MPI_INCLUDE;\n_LMFILES_=\'/usr/share/modulefiles/mpi/openmpi-aarch64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/openmpi-aarch64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/openmpi\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/openmpi\'; export MPI_PYTHON3_SITEARCH;\nMPI_HOME=\'/usr/lib64/openmpi\'; export MPI_HOME;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/openmpi\'; export MPI_FORTRAN_MOD_DIR;\n__MODULES_LMALTNAME=\'mpi/openmpi-aarch64&as|mpi/default&as|mpi/latest\'; export __MODULES_LMALTNAME;\n__MODULES_LMCONFLICT=\'mpi/openmpi-aarch64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SUFFIX=\'_openmpi\'; export MPI_SUFFIX;\nMPI_SYSCONFIG=\'/etc/openmpi-aarch64\'; export MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_LIB=\'/usr/lib64/openmpi/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/openmpi/bin\'; export MPI_BIN;\ntest 0;' ++ MPI_COMPILER=openmpi-aarch64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-aarch64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-aarch64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-aarch64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-aarch64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-aarch64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-aarch64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-aarch64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + pushd build_openmpi ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 + export OMPI_MCA_rmaps_base_oversubscribe=yes + OMPI_MCA_rmaps_base_oversubscribe=yes + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + export HDF5_USE_FILE_LOCKING=FALSE + HDF5_USE_FILE_LOCKING=FALSE + sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest #!/bin/bash # Cores: 3 make || exit test -z $MPIRUN && MPIRUN='mpirun -np' # Kill the test after 3 seconds, if it hasn't already exited OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization e=$? if test $e -ne 0 then echo "The test failed. That can be caused by a timeout." echo "If this test is run on high load, it may fail occasionally." echo "The load is:" uptime fi exit $e + make -j4 build-check /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 build-check make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 76 make -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 0%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o [ 0%] Creating test-fci-boundary grid file cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib: /usr/bin/python3.14 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/grid.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/grid.fci.nc cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/src/gtest-all.cc [ 2%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 3%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o [ 43%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y/wave.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection/advection.cxx [ 43%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-wave-1d-y.dir/link.d "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Built target MMS-wave-1d-y make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Linking CXX executable advection cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1 [ 43%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion/diffusion.cxx Making curvilinear poloidal grid creating grid... starting Bfield stuff done Bfield stuff starting Bfield stuff done Bfield stuff starting Bfield stuff done Bfield stuff WARNING: Outputting 2D metrics, discarding metric information. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Built target test-fci-boundary-grid make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Building CXX object tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -MF CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o.d -o CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci/fci_mms.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-advection.dir/link.d "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Built target MMS-advection make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d/wave.cxx [ 44%] Linking CXX executable cyto cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1 [ 44%] Linking CXX executable fci_mms cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-spatial-fci.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-diffusion.dir/link.d "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 44%] Built target MMS-diffusion make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 44%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx [ 46%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-spatial-fci.dir/link.d "CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o" -o fci_mms -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../../lib/libpvpre.so.1.0.0 ../../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 46%] Built target MMS-spatial-fci make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 48%] Built target boutpp.cpython-314-aarch64-linux-gnu make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 48%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace/boutexcept.cxx [ 48%] Linking CXX executable boutexcept cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-wave-1d.dir/link.d "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 48%] Built target MMS-wave-1d make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler/test_beuler.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-backtrace.dir/link.d "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Built target test-backtrace make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx [ 50%] Linking CXX executable test_yupdown_weights cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-yupdown-weights.dir/link.d "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Built target test-yupdown-weights make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args/command-args.cxx [ 50%] Linking CXX shared library ../../../../../lib/libgtest.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 [ 50%] Linking CXX executable command-args cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1 [ 51%] Linking CXX executable test-bout-override-default-option cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1 [ 51%] Linking CXX executable test_beuler cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-command-args.dir/link.d "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications/test-communications.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-bout-override-default-option.dir/link.d "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Built target test-bout-override-default-option /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test_beuler.dir/link.d CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Built target test_beuler make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic/test_cyclic.cxx /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/gtest.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.16.0 -o ../../../../../lib/libgtest.so.1.16.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Built target gtest make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2/test_delp2.cxx [ 52%] Linking CXX executable test-communications cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-communications.dir/link.d "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Built target test-communications make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade/test-datafile-facade.cxx [ 52%] Linking CXX executable test-coordinates-initialization cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-coordinates-initialization.dir/link.d "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Built target test-coordinates-initialization make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability/2fluid.cxx [ 53%] Linking CXX executable test_delp2 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1 [ 53%] Linking CXX executable test-datafile-facade cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1 [ 55%] Linking CXX executable test_cyclic cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-datafile-facade.dir/link.d "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 55%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 55%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered/2fluid.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-delp2.dir/link.d "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2 -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 55%] Built target test-delp2 make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 55%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-cyclic.dir/link.d "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 55%] Built target test-cyclic make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 56%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata/test_griddata.cxx [ 56%] Linking CXX executable test_fieldgroupcomm cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1 [ 57%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1 [ 57%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-fieldgroupComm.dir/link.d "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 57%] Built target test-fieldgroupComm /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-griddata.dir/link.d "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 57%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 57%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 59%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro/test_gyro.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-drift-instability.dir/link.d "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 59%] Built target test-drift-instability make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 59%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial/test_initial.cxx [ 59%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1 [ 59%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-griddata-yboundary-guards.dir/link.d "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 59%] Built target test-griddata-yboundary-guards [ 59%] Linking CXX executable test_gyro cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1 make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability/2fluid.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-gyro.dir/link.d "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Built target test-gyro make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate/test_interpolate.cxx [ 60%] Linking CXX executable test_initial cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-drift-instability-staggered.dir/link.d "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Built target test-drift-instability-staggered make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z/test_interpolate.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-initial.dir/link.d "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Built target test-initial make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator/invertable_operator.cxx [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1 [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1 [ 61%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interpolate.dir/link.d "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Built target test-interpolate /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interpolate-z.dir/link.d "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Built target test-interpolate-z make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 63%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar/test_invpar.cxx make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 63%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace/test_laplace.cxx [ 63%] Linking CXX executable invertable_operator cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interchange-instability.dir/link.d "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 63%] Built target test-interchange-instability make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-invertable-operator.dir/link.d "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 64%] Built target test-invertable-operator make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx [ 64%] Linking CXX executable test_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1 [ 64%] Linking CXX executable test_invpar cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1 [ 64%] Linking CXX executable test-laplace3d cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplace.dir/link.d "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 64%] Built target test-laplace make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short/test-laplacexy.cxx [ 65%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-invpar.dir/link.d "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Built target test-invpar make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz/test-laplacexz.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexy-fv.dir/link.d "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Built target test-laplacexy-fv make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplace-petsc3d.dir/link.d "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Built target test-laplace-petsc3d make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx [ 67%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1 [ 67%] Linking CXX executable test-laplacexz cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexy-short.dir/link.d "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Built target test-laplacexy-short make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf/test-options-netcdf.cxx [ 68%] Linking CXX executable test_naulin_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexz.dir/link.d "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target test-laplacexz make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx [ 68%] Linking CXX executable test_multigrid_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-naulin-laplace.dir/link.d "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target test-naulin-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 69%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-multigrid-laplace.dir/link.d "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 69%] Built target test-multigrid-laplace make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 69%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io/test-restart-io.cxx [ 69%] Linking CXX executable test-options-netcdf cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-options-netcdf.dir/link.d "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 69%] Built target test-options-netcdf make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 71%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting/test_restarting.cxx [ 71%] Linking CXX executable test_petsc_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1 [ 71%] Linking CXX executable test-restart-io cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1 [ 71%] Linking CXX executable test_restarting cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-restart-io.dir/link.d "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 71%] Built target test-restart-io make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 71%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth/test_smooth.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-restarting.dir/link.d "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 71%] Built target test-restarting make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb/test_snb.cxx [ 72%] Linking CXX executable test_petsc_laplace_MAST_grid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-petsc-laplace.dir/link.d "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-petsc-laplace make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver/test_solver.cxx [ 72%] Linking CXX executable test_smooth cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.d "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 73%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash/squash.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-smooth.dir/link.d "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 73%] Built target test-smooth make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 73%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck/test_stopCheck.cxx [ 73%] Linking CXX executable test_snb cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1 [ 73%] Linking CXX executable test_solver cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1 [ 73%] Linking CXX executable squash cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1 [ 73%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-squash.dir/link.d "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 73%] Built target test-squash make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file/test_stopCheck.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-stopCheck.dir/link.d "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Built target test-stopCheck make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift/test-twistshift.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-snb.dir/link.d "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Built target test-snb make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 76%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered/test-twistshift.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-solver.dir/link.d "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 76%] Built target test-solver make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 76%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec/testVec.cxx [ 76%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1 [ 76%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1 [ 76%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-twistshift.dir/link.d "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 76%] Built target test-twistshift make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown/test_yupdown.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-twistshift-staggered.dir/link.d "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-twistshift-staggered make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Building CXX object tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -MF CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o.d -o CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-stopCheck-file.dir/link.d "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-stopCheck-file make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/src/gmock-all.cc [ 77%] Linking CXX executable testVec cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-vec.dir/link.d "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-vec make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 78%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx:14:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14 | for (int i = 0; i < fields.size(); i++) { | ~~^~~~~~~~~~~~~~~ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 78%] Built target boutpp [ 78%] Linking CXX executable test_yupdown cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1 [ 80%] Linking CXX executable get_par_bndry cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fci-boundary.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-yupdown.dir/link.d "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target build-check-integrated-tests [ 80%] Linking CXX shared library ../../../../../lib/libgmock.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-fci-boundary.dir/link.d "CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o" -o get_par_bndry -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target test-fci-boundary make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target build-check-mms-tests /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/gmock.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.16.0 -o ../../../../../lib/libgmock.so.1.16.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../../../lib/libgtest.so.1.16.0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field2d.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field3d.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/test_cyclic_reduction.cxx In file included from /usr/include/c++/15/aarch64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/15/bits/allocator.h:46, from /usr/include/c++/15/memory:67, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest.h:55, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:1: In member function ‘std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’, inlined from ‘std::allocator_traits, std::allocator > > >::deallocate(std::allocator, std::allocator > >&, std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/alloc_traits.h:649:23, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::_M_deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/stl_vector.h:396:19, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::_M_deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/stl_vector.h:392:7, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::~_Vector_base()’ at /usr/include/c++/15/bits/stl_vector.h:375:15, inlined from ‘std::vector, std::allocator >, std::allocator, std::allocator > > >::~vector()’ at /usr/include/c++/15/bits/stl_vector.h:805:7, inlined from ‘TemplateCombinationsTest_TwoSetsMultiTypeItem_Test::TestBody()’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:148:1: /usr/include/c++/15/bits/new_allocator.h:172:66: warning: ‘operator delete(void*, unsigned long)’ called on pointer ‘__result’ with nonzero offset 32 [-Wfree-nonheap-object] 172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); | ^ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-printers.h:126, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-matchers.h:49, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:47, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-death-test.h:43, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest.h:64: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx: In member function ‘TemplateCombinationsTest_TwoSetsMultiTypeItem_Test::TestBody()’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:124:6: note: declared here 124 | TEST(TemplateCombinationsTest, TwoSetsMultiTypeItem) { | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem 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CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o.d -o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/src/test_bout++.cxx [100%] Linking CXX executable serial_tests cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/bin/cmake -E cmake_link_script CMakeFiles/serial_tests.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../lib/libgmock.so.1.16.0 ../../lib/libbout++.so.5.2.0 ../../lib/libgtest.so.1.16.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd 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build-check-unit-tests make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' + SEGFAULT_SIGNALS=segv + make check-unit-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-unit-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 48 make -f CMakeFiles/Makefile2 CMakeFiles/check-unit-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 0%] Built target gtest make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 4%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 6%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target bout++ make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check-unit-tests make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' ctest -R serial_tests --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi Start 1: serial_tests 1/1 Test #1: serial_tests ..................... Passed 5.54 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 5.57 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target check-unit-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' + SEGFAULT_SIGNALS=segv + make check-mms-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-mms-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 36 make -f CMakeFiles/Makefile2 CMakeFiles/check-mms-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 5%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 8%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target MMS-wave-1d-y make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target test-fci-boundary-grid make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Built target test-fci-boundary make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 97%] Built target MMS-diffusion make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 97%] Built target MMS-spatial-fci make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target MMS-wave-1d make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check-mms-tests make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' ctest -R MMS- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi Start 53: MMS-diffusion 1/8 Test #53: MMS-diffusion .................... Passed 18.18 sec Start 54: MMS-spatial-fci 2/8 Test #54: MMS-spatial-fci .................. Passed 9.63 sec Start 55: MMS-wave-1d 3/8 Test #55: MMS-wave-1d ...................... Passed 15.84 sec Start 56: MMS-wave-1d-y 4/8 Test #56: MMS-wave-1d-y .................... Passed 12.61 sec Start 57: MMS-bracket 5/8 Test #57: MMS-bracket ...................... Passed 1.27 sec Start 58: MMS-derivatives3 6/8 Test #58: MMS-derivatives3 ................. Passed 1.65 sec Start 59: MMS-shiftedmetricinterp 7/8 Test #59: MMS-shiftedmetricinterp .......... Passed 4.02 sec Start 60: MMS-upwinding3 8/8 Test #60: MMS-upwinding3 ................... Passed 1.98 sec 100% tests passed, 0 tests failed out of 8 Total Test time (real) = 65.19 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' Built target check-mms-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' + SEGFAULT_SIGNALS=segv + make check-integrated-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-integrated-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 58 make -f CMakeFiles/Makefile2 CMakeFiles/check-integrated-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 3%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 5%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 56%] Built target bout++ make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 56%] Built target test-yupdown-weights make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Built target boutpp.cpython-314-aarch64-linux-gnu make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 62%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 62%] Built target boutpp make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 62%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 63%] Built target test_beuler make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Built target test-bout-override-default-option make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-communications/CMakeFiles/test-communications.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Built target test-communications make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Built target test-coordinates-initialization make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target test-cyclic make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 70%] Built target test-delp2 make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 70%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-drift-instability make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-drift-instability-staggered make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 74%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 74%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Built target test-gyro make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-initial/CMakeFiles/test-initial.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Built target test-initial make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-interchange-instability make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-interpolate make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 79%] Built target test-interpolate-z make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 79%] Built target test-invertable-operator make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 81%] Built target test-invpar make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 81%] Built target test-laplace make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 82%] Built target test-laplace-petsc3d make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 82%] Built target test-laplacexy-fv make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 84%] Built target test-laplacexy-short make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 84%] Built target test-laplacexz make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 86%] Built target test-multigrid-laplace make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 86%] Built target test-naulin-laplace make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 87%] Built target test-options-netcdf make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 87%] Built target test-petsc-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 89%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 89%] Built target test-restart-io make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target test-restarting make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target test-smooth make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-snb/CMakeFiles/test-snb.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 93%] Built target test-snb make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-solver/CMakeFiles/test-solver.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 93%] Built target test-solver make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-squash/CMakeFiles/test-squash.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Built target test-squash make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Built target test-stopCheck make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 96%] Built target test-stopCheck-file make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 96%] Built target test-twistshift make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 98%] Built target test-twistshift-staggered make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-vec/CMakeFiles/test-vec.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 98%] Built target test-vec make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check-integrated-tests make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' ctest -R test- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi Start 2: test-backtrace 1/50 Test #2: test-backtrace ...................... Passed 0.55 sec Start 4: test-boutpp-collect 2/50 Test #4: test-boutpp-collect ................. Passed 1.37 sec Start 5: test-boutpp-collect-staggered 3/50 Test #5: test-boutpp-collect-staggered ....... Passed 1.36 sec Start 6: test-boutpp-legacy-model 4/50 Test #6: test-boutpp-legacy-model ............ Passed 1.48 sec Start 7: test-boutpp-mms-ddz 5/50 Test #7: test-boutpp-mms-ddz ................. Passed 1.25 sec Start 8: test-boutpp-print 6/50 Test #8: test-boutpp-print ................... Passed 1.25 sec Start 9: test-boutpp-simple-model 7/50 Test #9: test-boutpp-simple-model ............ Passed 1.51 sec Start 10: test-bout-override-default-option 8/50 Test #10: test-bout-override-default-option ... Passed 0.08 sec Start 11: test-command-args 9/50 Test #11: test-command-args ................... Passed 13.15 sec Start 12: test-communications 10/50 Test #12: test-communications ................. Passed 9.24 sec Start 13: test-coordinates-initialization 11/50 Test #13: test-coordinates-initialization ..... Passed 1.41 sec Start 14: test-cyclic 12/50 Test #14: test-cyclic ......................... Passed 15.77 sec Start 15: test-delp2 13/50 Test #15: test-delp2 .......................... Passed 18.79 sec Start 16: test-datafile-facade 14/50 Test #16: test-datafile-facade ................ Passed 3.86 sec Start 17: test-drift-instability 15/50 Test #17: test-drift-instability .............. Passed 5.65 sec Start 18: test-drift-instability-staggered 16/50 Test #18: test-drift-instability-staggered .... Passed 5.86 sec Start 19: test-fieldgroupComm 17/50 Test #19: test-fieldgroupComm ................. Passed 4.70 sec Start 20: test-fci-boundary 18/50 Test #20: test-fci-boundary ................... Passed 2.12 sec Start 21: test-griddata 19/50 Test #21: test-griddata ....................... Passed 1.65 sec Start 22: test-griddata-yboundary-guards 20/50 Test #22: test-griddata-yboundary-guards ...... Passed 8.84 sec Start 23: test-gyro 21/50 Test #23: test-gyro ........................... Passed 4.33 sec Start 24: test-initial 22/50 Test #24: test-initial ........................ Passed 10.32 sec Start 25: test-interchange-instability 23/50 Test #25: test-interchange-instability ........ Passed 10.59 sec Start 26: test-interpolate 24/50 Test #26: test-interpolate .................... Passed 16.60 sec Start 27: test-interpolate-z 25/50 Test #27: test-interpolate-z .................. Passed 5.79 sec Start 28: test-invertable-operator 26/50 Test #28: test-invertable-operator ............ Passed 3.03 sec Start 29: test-invpar 27/50 Test #29: test-invpar ......................... Passed 7.95 sec Start 30: test-laplace 28/50 Test #30: test-laplace ........................ Passed 16.10 sec Start 31: test-laplace-petsc3d 29/50 Test #31: test-laplace-petsc3d ................ Passed 10.48 sec Start 32: test-laplacexy-fv 30/50 Test #32: test-laplacexy-fv ................... Passed 27.33 sec Start 33: test-laplacexy-short 31/50 Test #33: test-laplacexy-short ................ Passed 73.28 sec Start 34: test-laplacexz 32/50 Test #34: test-laplacexz ...................... Passed 4.37 sec Start 35: test-multigrid-laplace 33/50 Test #35: test-multigrid-laplace .............. Passed 4.26 sec Start 36: test-naulin-laplace 34/50 Test #36: test-naulin-laplace ................. Passed 3.18 sec Start 37: test-options-netcdf 35/50 Test #37: test-options-netcdf ................. Passed 1.64 sec Start 38: test-petsc-laplace 36/50 Test #38: test-petsc-laplace .................. Passed 5.66 sec Start 39: test-petsc-laplace-MAST-grid 37/50 Test #39: test-petsc-laplace-MAST-grid ........ Passed 24.88 sec Start 40: test-restart-io 38/50 Test #40: test-restart-io ..................... Passed 6.44 sec Start 41: test-restarting 39/50 Test #41: test-restarting ..................... Passed 7.45 sec Start 42: test-smooth 40/50 Test #42: test-smooth ......................... Passed 5.68 sec Start 43: test-snb 41/50 Test #43: test-snb ............................ Passed 1.18 sec Start 44: test-solver 42/50 Test #44: test-solver ......................... Passed 3.42 sec Start 45: test-squash 43/50 Test #45: test-squash ......................... Passed 13.08 sec Start 46: test-stopCheck 44/50 Test #46: test-stopCheck ...................... Passed 0.23 sec Start 47: test-stopCheck-file 45/50 Test #47: test-stopCheck-file ................. Passed 7.03 sec Start 48: test-twistshift 46/50 Test #48: test-twistshift ..................... Passed 1.69 sec Start 49: test-twistshift-staggered 47/50 Test #49: test-twistshift-staggered ........... Passed 1.69 sec Start 50: test-vec 48/50 Test #50: test-vec ............................ Passed 1.54 sec Start 51: test-yupdown 49/50 Test #51: test-yupdown ........................ Passed 3.00 sec Start 52: test-yupdown-weights 50/50 Test #52: test-yupdown-weights ................ Passed 1.67 sec 100% tests passed, 0 tests failed out of 50 Total Test time (real) = 383.81 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' Built target check-integrated-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' + popd ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-aarch64 + eval $'unset MPI_COMPILER;\nunset LD_LIBRARY_PATH;\nunset MPI_MAN;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_HOME;\nunset MPI_FORTRAN_MOD_DIR;\nunset __MODULES_LMALTNAME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SUFFIX;\nunset MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + fail=1 + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-aarch64 + eval $'LD_LIBRARY_PATH=\'/usr/lib64/mpich/lib\'; export LD_LIBRARY_PATH;\nMPI_COMPILER=\'mpich-aarch64\'; export MPI_COMPILER;\nMANPATH=\'/usr/share/man/mpich-aarch64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/mpich-aarch64\'; export MPI_INCLUDE;\nMPI_MAN=\'/usr/share/man/mpich-aarch64\'; export MPI_MAN;\nMPI_PYTHON_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON_SITEARCH;\n_LMFILES_=\'/usr/share/modulefiles/mpi/mpich-aarch64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/mpich-aarch64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/mpich\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/mpich\'; export MPI_PYTHON3_SITEARCH;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/mpich\'; export MPI_FORTRAN_MOD_DIR;\nMPI_HOME=\'/usr/lib64/mpich\'; export MPI_HOME;\n__MODULES_LMCONFLICT=\'mpi/mpich-aarch64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SYSCONFIG=\'/etc/mpich-aarch64\'; export MPI_SYSCONFIG;\nMPI_SUFFIX=\'_mpich\'; export MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_PYTHON2_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON2_SITEARCH;\nMPI_LIB=\'/usr/lib64/mpich/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/mpich/bin\'; export MPI_BIN;\ntest 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-aarch64 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-aarch64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-aarch64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-aarch64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-aarch64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-aarch64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/mpich ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-aarch64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 ++ MPI_SYSCONFIG=/etc/mpich-aarch64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + pushd build_mpich + export OMPI_MCA_rmaps_base_oversubscribe=yes + OMPI_MCA_rmaps_base_oversubscribe=yes + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + export HDF5_USE_FILE_LOCKING=FALSE + HDF5_USE_FILE_LOCKING=FALSE + sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest #!/bin/bash # Cores: 3 make || exit test -z $MPIRUN && MPIRUN='mpirun -np' # Kill the test after 3 seconds, if it hasn't already exited OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization e=$? if test $e -ne 0 then echo "The test failed. That can be caused by a timeout." echo "If this test is run on high load, it may fail occasionally." echo "The load is:" uptime fi exit $e + make -j4 build-check /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 build-check make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 76 make -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 0%] Creating test-fci-boundary grid file cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib: /usr/bin/python3.14 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/grid.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/grid.fci.nc [ 0%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/src/gtest-all.cc [ 2%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 3%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y/wave.cxx [ 43%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection/advection.cxx [ 43%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1 [ 43%] Linking CXX executable advection cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-wave-1d-y.dir/link.d "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Built target MMS-wave-1d-y make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion/diffusion.cxx Making curvilinear poloidal grid creating grid... starting Bfield stuff done Bfield stuff starting Bfield stuff done Bfield stuff starting Bfield stuff done Bfield stuff WARNING: Outputting 2D metrics, discarding metric information. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Built target test-fci-boundary-grid make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Building CXX object tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -MF CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o.d -o CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci/fci_mms.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-advection.dir/link.d "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Built target MMS-advection make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d/wave.cxx [ 44%] Linking CXX executable cyto cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1 [ 44%] Linking CXX executable fci_mms cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-spatial-fci.dir/link.txt --verbose=1 [ 46%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-diffusion.dir/link.d "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 46%] Built target MMS-diffusion make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 46%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-spatial-fci.dir/link.d "CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o" -o fci_mms -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../../lib/libpvpre.so.1.0.0 ../../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 46%] Built target MMS-spatial-fci make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 48%] Built target boutpp.cpython-314-aarch64-linux-gnu make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 48%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace/boutexcept.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-wave-1d.dir/link.d "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 48%] Built target MMS-wave-1d make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler/test_beuler.cxx [ 50%] Linking CXX executable boutexcept cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-backtrace.dir/link.d "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Built target test-backtrace make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx [ 50%] Linking CXX executable test_yupdown_weights cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-yupdown-weights.dir/link.d "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Built target test-yupdown-weights make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args/command-args.cxx [ 50%] Linking CXX shared library ../../../../../lib/libgtest.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 [ 50%] Linking CXX executable command-args cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1 [ 50%] Linking CXX executable test_beuler cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1 [ 51%] Linking CXX executable test-bout-override-default-option cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-command-args.dir/link.d "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Built target test-command-args /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test_beuler.dir/link.d CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Built target test_beuler /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-bout-override-default-option.dir/link.d "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Built target test-bout-override-default-option make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications/test-communications.cxx make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic/test_cyclic.cxx /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/gtest.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.16.0 -o ../../../../../lib/libgtest.so.1.16.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Built target gtest make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2/test_delp2.cxx [ 51%] Linking CXX executable test-coordinates-initialization cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-coordinates-initialization.dir/link.d "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Built target test-coordinates-initialization make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade/test-datafile-facade.cxx [ 52%] Linking CXX executable test-communications cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-communications.dir/link.d "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 52%] Built target test-communications make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 52%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability/2fluid.cxx [ 53%] Linking CXX executable test_delp2 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1 [ 55%] Linking CXX executable test_cyclic cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1 [ 55%] Linking CXX executable test-datafile-facade cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-delp2.dir/link.d "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2 -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 55%] Built target test-delp2 make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 55%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered/2fluid.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-datafile-facade.dir/link.d "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 55%] Built target test-datafile-facade make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 55%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-cyclic.dir/link.d "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 55%] Built target test-cyclic make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata/test_griddata.cxx [ 56%] Linking CXX executable test_fieldgroupcomm cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1 [ 56%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-fieldgroupComm.dir/link.d "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-griddata.dir/link.d "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Built target test-griddata make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 57%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro/test_gyro.cxx [ 59%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1 [ 59%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1 [ 59%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1 [ 59%] Linking CXX executable test_gyro cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-griddata-yboundary-guards.dir/link.d "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 59%] Built target test-griddata-yboundary-guards /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-drift-instability.dir/link.d "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 59%] Built target test-drift-instability make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 59%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial/test_initial.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-gyro.dir/link.d "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 59%] Built target test-gyro make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability/2fluid.cxx make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate/test_interpolate.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-drift-instability-staggered.dir/link.d "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Built target test-drift-instability-staggered make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z/test_interpolate.cxx [ 61%] Linking CXX executable test_initial cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-initial.dir/link.d "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Built target test-initial make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator/invertable_operator.cxx [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1 [ 61%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1 [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interpolate.dir/link.d "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Built target test-interpolate make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar/test_invpar.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interchange-instability.dir/link.d "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Built target test-interchange-instability make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace/test_laplace.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interpolate-z.dir/link.d "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Built target test-interpolate-z make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx [ 64%] Linking CXX executable invertable_operator cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1 [ 64%] Linking CXX executable test_invpar cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1 [ 64%] Linking CXX executable test_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-invertable-operator.dir/link.d "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 64%] Built target test-invertable-operator make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx [ 64%] Linking CXX executable test-laplace3d cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplace.dir/link.d "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 64%] Built target test-laplace make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short/test-laplacexy.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-invpar.dir/link.d "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Built target test-invpar make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz/test-laplacexz.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplace-petsc3d.dir/link.d "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Built target test-laplace-petsc3d make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx [ 67%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexy-fv.dir/link.d "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Built target test-laplacexy-fv make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx [ 67%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1 [ 67%] Linking CXX executable test-laplacexz cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexy-short.dir/link.d "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Built target test-laplacexy-short make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf/test-options-netcdf.cxx [ 68%] Linking CXX executable test_multigrid_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexz.dir/link.d "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target test-laplacexz make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-multigrid-laplace.dir/link.d "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target test-multigrid-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 69%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx [ 69%] Linking CXX executable test_naulin_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1 [ 69%] Linking CXX executable test-options-netcdf cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-options-netcdf.dir/link.d "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 69%] Built target test-options-netcdf make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 69%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io/test-restart-io.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-naulin-laplace.dir/link.d "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 69%] Built target test-naulin-laplace make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 71%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting/test_restarting.cxx [ 71%] Linking CXX executable test_petsc_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1 [ 71%] Linking CXX executable test_restarting cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1 [ 71%] Linking CXX executable test-restart-io cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-petsc-laplace.dir/link.d "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 71%] Built target test-petsc-laplace make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 71%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth/test_smooth.cxx [ 71%] Linking CXX executable test_petsc_laplace_MAST_grid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-restarting.dir/link.d "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 71%] Built target test-restarting make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb/test_snb.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-restart-io.dir/link.d "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-restart-io make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver/test_solver.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.d "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 73%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash/squash.cxx [ 73%] Linking CXX executable test_smooth cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-smooth.dir/link.d "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 73%] Built target test-smooth make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 73%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck/test_stopCheck.cxx [ 73%] Linking CXX executable squash cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1 [ 73%] Linking CXX executable test_snb cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1 [ 73%] Linking CXX executable test_solver cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-squash.dir/link.d "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 73%] Built target test-squash make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file/test_stopCheck.cxx [ 75%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-stopCheck.dir/link.d "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Built target test-stopCheck make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift/test-twistshift.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-snb.dir/link.d "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Built target test-snb make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 76%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered/test-twistshift.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-solver.dir/link.d "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 76%] Built target test-solver make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 76%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec/testVec.cxx [ 76%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1 [ 76%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1 [ 76%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-stopCheck-file.dir/link.d "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 76%] Built target test-stopCheck-file make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown/test_yupdown.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-twistshift.dir/link.d "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-twistshift make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Building CXX object tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -MF CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o.d -o CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-twistshift-staggered.dir/link.d "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-twistshift-staggered make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/src/gmock-all.cc [ 77%] Linking CXX executable testVec cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx:14:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14 | for (int i = 0; i < fields.size(); i++) { | ~~^~~~~~~~~~~~~~~ /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-vec.dir/link.d "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-vec make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 78%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 78%] Built target boutpp [ 78%] Linking CXX executable test_yupdown cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1 [ 80%] Linking CXX executable get_par_bndry cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fci-boundary.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-yupdown.dir/link.d "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target build-check-integrated-tests [ 80%] Linking CXX shared library ../../../../../lib/libgmock.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-fci-boundary.dir/link.d "CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o" -o get_par_bndry -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target test-fci-boundary make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target build-check-mms-tests /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/gmock.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.16.0 -o ../../../../../lib/libgmock.so.1.16.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../../../lib/libgtest.so.1.16.0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field2d.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field3d.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable] 29 | bout::HypreLib hyprelib{}; | ^~~~~~~~ [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field_factory.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_fieldgroup.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_fieldperp.cxx [ 82%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED 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cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem 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CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_traits.cxx [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-aarch64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/test_cyclic_reduction.cxx In file included from /usr/include/c++/15/aarch64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/15/bits/allocator.h:46, from /usr/include/c++/15/memory:67, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest.h:55, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:1: In member function ‘std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’, inlined from ‘std::allocator_traits, std::allocator > > >::deallocate(std::allocator, std::allocator > >&, std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/alloc_traits.h:649:23, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::_M_deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/stl_vector.h:396:19, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::_M_deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/stl_vector.h:392:7, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::~_Vector_base()’ at /usr/include/c++/15/bits/stl_vector.h:375:15, inlined from ‘std::vector, std::allocator >, std::allocator, std::allocator > > >::~vector()’ at /usr/include/c++/15/bits/stl_vector.h:805:7, inlined from ‘TemplateCombinationsTest_TwoSetsMultiTypeItem_Test::TestBody()’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:148:1: /usr/include/c++/15/bits/new_allocator.h:172:66: warning: ‘operator delete(void*, unsigned long)’ called on pointer ‘__result’ with nonzero offset 32 [-Wfree-nonheap-object] 172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); | ^ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-printers.h:126, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-matchers.h:49, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:47, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-death-test.h:43, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest.h:64: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx: In member function ‘TemplateCombinationsTest_TwoSetsMultiTypeItem_Test::TestBody()’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:124:6: note: declared here 124 | TEST(TemplateCombinationsTest, TwoSetsMultiTypeItem) { | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/test_derivs.cxx [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/test_mask.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/test_mask.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_mask.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/test_mask.cxx [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/serial_tests.dir/link.d CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o 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CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../lib/libgmock.so.1.16.0 ../../lib/libbout++.so.5.2.0 ../../lib/libgtest.so.1.16.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check-unit-tests make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' + SEGFAULT_SIGNALS=segv + make check-unit-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-unit-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 48 make -f CMakeFiles/Makefile2 CMakeFiles/check-unit-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 0%] Built target gtest make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 4%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 6%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target bout++ make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check-unit-tests make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' ctest -R serial_tests --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich Start 1: serial_tests 1/1 Test #1: serial_tests ..................... Passed 3.99 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 4.06 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target check-unit-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' + SEGFAULT_SIGNALS=segv + make check-mms-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-mms-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 36 make -f CMakeFiles/Makefile2 CMakeFiles/check-mms-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 5%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 8%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target MMS-wave-1d-y make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target test-fci-boundary-grid make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Built target test-fci-boundary make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 97%] Built target MMS-diffusion make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 97%] Built target MMS-spatial-fci make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target MMS-wave-1d make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check-mms-tests make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' ctest -R MMS- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich Start 53: MMS-diffusion 1/8 Test #53: MMS-diffusion .................... Passed 10.61 sec Start 54: MMS-spatial-fci 2/8 Test #54: MMS-spatial-fci .................. Passed 3.84 sec Start 55: MMS-wave-1d 3/8 Test #55: MMS-wave-1d ...................... Passed 9.21 sec Start 56: MMS-wave-1d-y 4/8 Test #56: MMS-wave-1d-y .................... Passed 5.94 sec Start 57: MMS-bracket 5/8 Test #57: MMS-bracket ...................... Passed 0.22 sec Start 58: MMS-derivatives3 6/8 Test #58: MMS-derivatives3 ................. Passed 0.59 sec Start 59: MMS-shiftedmetricinterp 7/8 Test #59: MMS-shiftedmetricinterp .......... Passed 2.98 sec Start 60: MMS-upwinding3 8/8 Test #60: MMS-upwinding3 ................... Passed 0.91 sec 100% tests passed, 0 tests failed out of 8 Total Test time (real) = 34.31 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' Built target check-mms-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' + SEGFAULT_SIGNALS=segv + make check-integrated-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-integrated-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 58 make -f CMakeFiles/Makefile2 CMakeFiles/check-integrated-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 3%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 5%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Built target bout++ make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Built target test-yupdown-weights make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-aarch64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Built target boutpp.cpython-314-aarch64-linux-gnu make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 62%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-314-aarch64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-aarch64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 62%] Built target boutpp make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 62%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Built target test_beuler make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Built target test-bout-override-default-option make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-communications/CMakeFiles/test-communications.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Built target test-communications make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Built target test-coordinates-initialization make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target test-cyclic make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 70%] Built target test-delp2 make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 70%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-drift-instability make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-drift-instability-staggered make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 74%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 74%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Built target test-gyro make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-initial/CMakeFiles/test-initial.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Built target test-initial make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-interchange-instability make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-interpolate make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 79%] Built target test-interpolate-z make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 79%] Built target test-invertable-operator make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 81%] Built target test-invpar make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 81%] Built target test-laplace make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 82%] Built target test-laplace-petsc3d make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 82%] Built target test-laplacexy-fv make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 84%] Built target test-laplacexy-short make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 84%] Built target test-laplacexz make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 86%] Built target test-multigrid-laplace make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 86%] Built target test-naulin-laplace make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 87%] Built target test-options-netcdf make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 87%] Built target test-petsc-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 89%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 89%] Built target test-restart-io make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target test-restarting make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target test-smooth make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-snb/CMakeFiles/test-snb.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 93%] Built target test-snb make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-solver/CMakeFiles/test-solver.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 93%] Built target test-solver make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-squash/CMakeFiles/test-squash.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Built target test-squash make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Built target test-stopCheck make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 96%] Built target test-stopCheck-file make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 96%] Built target test-twistshift make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 98%] Built target test-twistshift-staggered make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-vec/CMakeFiles/test-vec.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 98%] Built target test-vec make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check-integrated-tests make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' ctest -R test- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich Start 2: test-backtrace 1/50 Test #2: test-backtrace ...................... Passed 0.46 sec Start 4: test-boutpp-collect 2/50 Test #4: test-boutpp-collect ................. Passed 0.32 sec Start 5: test-boutpp-collect-staggered 3/50 Test #5: test-boutpp-collect-staggered ....... Passed 0.32 sec Start 6: test-boutpp-legacy-model 4/50 Test #6: test-boutpp-legacy-model ............ Passed 0.44 sec Start 7: test-boutpp-mms-ddz 5/50 Test #7: test-boutpp-mms-ddz ................. Passed 0.21 sec Start 8: test-boutpp-print 6/50 Test #8: test-boutpp-print ................... Passed 0.21 sec Start 9: test-boutpp-simple-model 7/50 Test #9: test-boutpp-simple-model ............ Passed 0.47 sec Start 10: test-bout-override-default-option 8/50 Test #10: test-bout-override-default-option ... Passed 0.04 sec Start 11: test-command-args 9/50 Test #11: test-command-args ................... Passed 1.92 sec Start 12: test-communications 10/50 Test #12: test-communications ................. Passed 6.81 sec Start 13: test-coordinates-initialization 11/50 Test #13: test-coordinates-initialization ..... Passed 0.32 sec Start 14: test-cyclic 12/50 Test #14: test-cyclic ......................... Passed 2.00 sec Start 15: test-delp2 13/50 Test #15: test-delp2 .......................... Passed 5.57 sec Start 16: test-datafile-facade 14/50 Test #16: test-datafile-facade ................ Passed 1.63 sec Start 17: test-drift-instability 15/50 Test #17: test-drift-instability .............. Passed 3.43 sec Start 18: test-drift-instability-staggered 16/50 Test #18: test-drift-instability-staggered .... Passed 3.61 sec Start 19: test-fieldgroupComm 17/50 Test #19: test-fieldgroupComm ................. Passed 1.35 sec Start 20: test-fci-boundary 18/50 Test #20: test-fci-boundary ................... Passed 0.93 sec Start 21: test-griddata 19/50 Test #21: test-griddata ....................... Passed 0.50 sec Start 22: test-griddata-yboundary-guards 20/50 Test #22: test-griddata-yboundary-guards ...... Passed 4.10 sec Start 23: test-gyro 21/50 Test #23: test-gyro ........................... Passed 0.99 sec Start 24: test-initial 22/50 Test #24: test-initial ........................ Passed 5.91 sec Start 25: test-interchange-instability 23/50 Test #25: test-interchange-instability ........ Passed 8.47 sec Start 26: test-interpolate 24/50 Test #26: test-interpolate .................... Passed 3.36 sec Start 27: test-interpolate-z 25/50 Test #27: test-interpolate-z .................. Passed 1.34 sec Start 28: test-invertable-operator 26/50 Test #28: test-invertable-operator ............ Passed 0.78 sec Start 29: test-invpar 27/50 Test #29: test-invpar ......................... Passed 1.31 sec Start 30: test-laplace 28/50 Test #30: test-laplace ........................ Passed 6.18 sec Start 31: test-laplace-petsc3d 29/50 Test #31: test-laplace-petsc3d ................ Passed 6.00 sec Start 32: test-laplacexy-fv 30/50 Test #32: test-laplacexy-fv ................... Passed 37.18 sec Start 33: test-laplacexy-short 31/50 Test #33: test-laplacexy-short ................ Passed 102.13 sec Start 34: test-laplacexz 32/50 Test #34: test-laplacexz ...................... Passed 1.04 sec Start 35: test-multigrid-laplace 33/50 Test #35: test-multigrid-laplace .............. Passed 2.02 sec Start 36: test-naulin-laplace 34/50 Test #36: test-naulin-laplace ................. Passed 0.93 sec Start 37: test-options-netcdf 35/50 Test #37: test-options-netcdf ................. Passed 0.49 sec Start 38: test-petsc-laplace 36/50 Test #38: test-petsc-laplace .................. Passed 2.31 sec Start 39: test-petsc-laplace-MAST-grid 37/50 Test #39: test-petsc-laplace-MAST-grid ........ Passed 8.38 sec Start 40: test-restart-io 38/50 Test #40: test-restart-io ..................... Passed 3.09 sec Start 41: test-restarting 39/50 Test #41: test-restarting ..................... Passed 1.91 sec Start 42: test-smooth 40/50 Test #42: test-smooth ......................... Passed 1.24 sec Start 43: test-snb 41/50 Test #43: test-snb ............................ Passed 0.13 sec Start 44: test-solver 42/50 Test #44: test-solver ......................... Passed 2.38 sec Start 45: test-squash 43/50 Test #45: test-squash ......................... Passed 5.23 sec Start 46: test-stopCheck 44/50 Test #46: test-stopCheck ...................... Passed 0.19 sec Start 47: test-stopCheck-file 45/50 Test #47: test-stopCheck-file ................. Passed 2.18 sec Start 48: test-twistshift 46/50 Test #48: test-twistshift ..................... Passed 0.54 sec Start 49: test-twistshift-staggered 47/50 Test #49: test-twistshift-staggered ........... Passed 0.55 sec Start 50: test-vec 48/50 Test #50: test-vec ............................ Passed 0.45 sec Start 51: test-yupdown 49/50 Test #51: test-yupdown ........................ Passed 0.75 sec Start 52: test-yupdown-weights 50/50 Test #52: test-yupdown-weights ................ Passed 0.53 sec 100% tests passed, 0 tests failed out of 50 Total Test time (real) = 242.61 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' Built target check-integrated-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' + popd ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-aarch64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-aarch64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-aarch64 + eval $'unset LD_LIBRARY_PATH;\nunset MPI_COMPILER;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset MPI_MAN;\nunset MPI_PYTHON_SITEARCH;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_FORTRAN_MOD_DIR;\nunset MPI_HOME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SYSCONFIG;\nunset MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_PYTHON2_SITEARCH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: bout++-mpich-5.2.0-3.fc44.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.lLXvqQ + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + DOCDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/README.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.bib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.cff /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.uoHG1R + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich + RPM_EC=0 ++ jobs -p + exit 0 Provides: bout++-mpich = 5.2.0-3.fc44 bout++-mpich(aarch-64) = 5.2.0-3.fc44 bundled(libpvode) libbout++.so.5.2.0()(64bit)(mpich-aarch64) libpvode.so.1.0.0()(64bit)(mpich-aarch64) libpvpre.so.1.0.0()(64bit)(mpich-aarch64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.12()(64bit)(mpich-aarch64) libnetcdf.so.22()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.24()(64bit)(mpich-aarch64) libpvode.so.1.0.0()(64bit)(mpich-aarch64) libpvpre.so.1.0.0()(64bit)(mpich-aarch64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.6()(64bit)(mpich-aarch64) libsundials_core.so.7()(64bit)(mpich-aarch64) libsundials_cvode.so.7()(64bit)(mpich-aarch64) libsundials_ida.so.7()(64bit)(mpich-aarch64) libsundials_nvecparallel.so.7()(64bit)(mpich-aarch64) rtld(GNU_HASH) Recommends: environment-modules python3-boutdata python3-boututils python3-xbout Processing files: bout++-mpich-devel-5.2.0-3.fc44.aarch64 Provides: bout++-mpich-devel = 5.2.0-3.fc44 bout++-mpich-devel(aarch-64) = 5.2.0-3.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel Processing files: python3-bout++-mpich-5.2.0-3.fc44.aarch64 Provides: libboutpp.cpython-314-aarch64-linux-gnu.so()(64bit)(mpich-aarch64) python-bout++-mpich = 5.2.0-3.fc44 python3-bout++-mpich = 5.2.0-3.fc44 python3-bout++-mpich(aarch-64) = 5.2.0-3.fc44 python3.14-bout++-mpich = 5.2.0-3.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libbout++.so.5.2.0()(64bit)(mpich-aarch64) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.14 rtld(GNU_HASH) Recommends: python3-xbout Processing files: bout++-openmpi-5.2.0-3.fc44.aarch64 error: File not found: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.1.0 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.WlQKPk + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + DOCDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/README.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.bib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.cff /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.3olkhQ + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi + RPM_EC=0 ++ jobs -p + exit 0 RPM build errors: No patch number 1 File not found: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.1.0 Finish: rpmbuild bout++-5.2.0-3.fc44.src.rpm Finish: build phase for bout++-5.2.0-3.fc44.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1765172247.251471/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names ERROR: Exception(/var/lib/copr-rpmbuild/results/bout++-5.2.0-3.fc44.src.rpm) Config(fedora-rawhide-aarch64) 30 minutes 7 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_failure=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot ERROR: Command failed: # /usr/bin/systemd-nspawn -q -M c81390c3ea3a477a8e1ec4ae9a89f67b -D /var/lib/mock/fedora-rawhide-aarch64-1765172247.251471/root -a -u mockbuild --capability=cap_ipc_lock --capability=cap_ipc_lock --bind=/tmp/mock-resolv.jtddio5m:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin '--setenv=PROMPT_COMMAND=printf "\033]0;\007"' '--setenv=PS1= \s-\v\$ ' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/originals/bout++.spec' Copr build error: Build failed