Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c113' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8447500-fedora-40-x86_64 --chroot fedora-40-x86_64 Version: 1.2 PID: 25112 Logging PID: 25113 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8447500, 'buildroot_pkgs': [], 'chroot': 'fedora-40-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '229b053e13f0ee68d5df176c7010b93760195763', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/python3-scipy-1.11.1/ProDy', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'ProDy', 'package_version': '2.4.1-9', 'project_dirname': 'python3-scipy-1.11.1', 'project_name': 'python3-scipy-1.11.1', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/python3-scipy-1.11.1/fedora-40-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/python3-scipy-1.11.1--https://src.fedoraproject.org/user/sagitter', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/sagitter', 'tags': [], 'task_id': '8447500-fedora-40-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/python3-scipy-1.11.1/ProDy /var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/python3-scipy-1.11.1/ProDy', '/var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy'... Running: git checkout 229b053e13f0ee68d5df176c7010b93760195763 -- cmd: ['git', 'checkout', '229b053e13f0ee68d5df176c7010b93760195763', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy rc: 0 stdout: stderr: Note: switching to '229b053e13f0ee68d5df176c7010b93760195763'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 229b053 automatic import of ProDy Running: dist-git-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Dload Upload Total Spent Left Speed 100 25.9M 100 25.9M 0 0 83.6M 0 --:--:-- --:--:-- --:--:-- 83.5M INFO: Reading stdout from command: md5sum ProDy-2.4.1.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1735153053.860078 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.0 starting (python version = 3.13.0, NVR = mock-6.0-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1735153053.860078 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy/ProDy.spec) Config(fedora-40-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.0 INFO: Mock Version: 6.0 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-x86_64-bootstrap-1735153053.860078/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:40 INFO: Pulling image: registry.fedoraproject.org/fedora:40 INFO: Tagging container image as mock-bootstrap-a29a7ce5-1bfd-4df3-b25b-aef9604a9f22 INFO: Checking that 232a43f45c933bf197a791924c6fe705ddb6ae17323b2176afea7906929f8389 image matches host's architecture INFO: Copy content of container 232a43f45c933bf197a791924c6fe705ddb6ae17323b2176afea7906929f8389 to /var/lib/mock/fedora-40-x86_64-bootstrap-1735153053.860078/root INFO: mounting 232a43f45c933bf197a791924c6fe705ddb6ae17323b2176afea7906929f8389 with podman image mount INFO: image 232a43f45c933bf197a791924c6fe705ddb6ae17323b2176afea7906929f8389 as /var/lib/containers/storage/overlay/fd21b0eec165c87e22a9db0ee085af344e7156f57dd847ab16ec383ee7f001da/merged INFO: umounting image 232a43f45c933bf197a791924c6fe705ddb6ae17323b2176afea7906929f8389 (/var/lib/containers/storage/overlay/fd21b0eec165c87e22a9db0ee085af344e7156f57dd847ab16ec383ee7f001da/merged) with podman image umount INFO: Removing image mock-bootstrap-a29a7ce5-1bfd-4df3-b25b-aef9604a9f22 INFO: Using 'dnf4' instead of 'dnf5' for bootstrap chroot INFO: Package manager dnf4 detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf5 tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 2.3 MB/s | 276 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 50 MB/s | 14 MB 00:00 fedora 20 MB/s | 20 MB 00:00 updates 9.0 MB/s | 12 MB 00:01 Dependencies resolved. ============================================================================================================= Package Arch Version Repository Size ============================================================================================================= Installing: dnf5 x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 754 k replacing dnf.noarch 4.22.0-1.fc40 replacing yum.noarch 4.22.0-1.fc40 dnf5-plugins x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 399 k Installing dependencies: fmt x86_64 11.0.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k libdnf5 x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M libdnf5-cli x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 330 k sdbus-cpp x86_64 1.5.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113 k Transaction Summary ============================================================================================================= Install 6 Packages Total download size: 2.8 M Downloading Packages: (1/6): fmt-11.0.2-2.fc42.x86_64.rpm 1.2 MB/s | 100 kB 00:00 (2/6): dnf5-5.2.8.1-2.fc42.x86_64.rpm 7.9 MB/s | 754 kB 00:00 (3/6): dnf5-plugins-5.2.8.1-2.fc42.x86_64.rpm 4.1 MB/s | 399 kB 00:00 (4/6): libdnf5-cli-5.2.8.1-2.fc42.x86_64.rpm 14 MB/s | 330 kB 00:00 (5/6): sdbus-cpp-1.5.0-3.fc41.x86_64.rpm 5.0 MB/s | 113 kB 00:00 (6/6): libdnf5-5.2.8.1-2.fc42.x86_64.rpm 24 MB/s | 1.1 MB 00:00 -------------------------------------------------------------------------------- Total 21 MB/s | 2.8 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Error: Transaction test error: file /etc/dnf/dnf.conf from install of libdnf5-5.2.8.1-2.fc42.x86_64 conflicts with file from package dnf-data-4.22.0-1.fc40.noarch WARNING: DNF4 command failed, retrying, attempt #2, sleeping 10s No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 50 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 69 kB/s | 3.5 kB 00:00 fedora 965 kB/s | 31 kB 00:00 updates 1.3 MB/s | 31 kB 00:00 Dependencies resolved. ============================================================================================================= Package Arch Version Repository Size ============================================================================================================= Installing: dnf5 x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 754 k replacing dnf.noarch 4.22.0-1.fc40 replacing yum.noarch 4.22.0-1.fc40 dnf5-plugins x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 399 k Installing dependencies: fmt x86_64 11.0.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k libdnf5 x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M libdnf5-cli x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 330 k sdbus-cpp x86_64 1.5.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113 k Transaction Summary ============================================================================================================= Install 6 Packages Total size: 2.8 M Downloading Packages: [SKIPPED] dnf5-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] dnf5-plugins-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] fmt-11.0.2-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] libdnf5-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] libdnf5-cli-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] sdbus-cpp-1.5.0-3.fc41.x86_64.rpm: Already downloaded Running transaction check Transaction check succeeded. Running transaction test Error: Transaction test error: file /etc/dnf/dnf.conf from install of libdnf5-5.2.8.1-2.fc42.x86_64 conflicts with file from package dnf-data-4.22.0-1.fc40.noarch WARNING: DNF4 command failed, retrying, attempt #3, sleeping 10s No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 49 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 66 kB/s | 3.5 kB 00:00 fedora 1.3 MB/s | 31 kB 00:00 updates 1.2 MB/s | 31 kB 00:00 Dependencies resolved. ============================================================================================================= Package Arch Version Repository Size ============================================================================================================= Installing: dnf5 x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 754 k replacing dnf.noarch 4.22.0-1.fc40 replacing yum.noarch 4.22.0-1.fc40 dnf5-plugins x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 399 k Installing dependencies: fmt x86_64 11.0.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k libdnf5 x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M libdnf5-cli x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 330 k sdbus-cpp x86_64 1.5.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113 k Transaction Summary ============================================================================================================= Install 6 Packages Total size: 2.8 M Downloading Packages: [SKIPPED] dnf5-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] dnf5-plugins-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] fmt-11.0.2-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] libdnf5-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] libdnf5-cli-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] sdbus-cpp-1.5.0-3.fc41.x86_64.rpm: Already downloaded Running transaction check Transaction check succeeded. Running transaction test Error: Transaction test error: file /etc/dnf/dnf.conf from install of libdnf5-5.2.8.1-2.fc42.x86_64 conflicts with file from package dnf-data-4.22.0-1.fc40.noarch ERROR: Exception(/var/lib/copr-rpmbuild/workspace/workdir-uspel3d4/ProDy/ProDy.spec) Config(fedora-40-x86_64) 0 minutes 44 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_failure=True') Start: clean chroot Finish: clean chroot ERROR: Command failed: # /usr/bin/systemd-nspawn -q -M 21659ea837254a11b2d12ab9aebc97e0 -D /var/lib/mock/fedora-40-x86_64-bootstrap-1735153053.860078/root -a --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/var/lib/mock/fedora-40-x86_64-bootstrap-1735153053.860078/root/installation-homedir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin '--setenv=PROMPT_COMMAND=printf "\033]0;\007"' '--setenv=PS1= \s-\v\$ ' --setenv=LANG=C.UTF-8 --setenv=LC_MESSAGES=C.UTF-8 --setenv=SYSTEMD_NSPAWN_TMPFS_TMP=0 --setenv=SYSTEMD_SECCOMP=0 --resolv-conf=off /usr/bin/dnf-3 --releasever 40 --setopt=deltarpm=False --setopt=allow_vendor_change=yes --allowerasing --disableplugin=local --disableplugin=spacewalk --disableplugin=versionlock install dnf5 dnf5-plugins --setopt=tsflags=nocontexts --setopt=tsflags=nocontexts --setopt=tsflags=nocontexts No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 49 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 66 kB/s | 3.5 kB 00:00 fedora 1.3 MB/s | 31 kB 00:00 updates 1.2 MB/s | 31 kB 00:00 Dependencies resolved. ============================================================================================================= Package Arch Version Repository Size ============================================================================================================= Installing: dnf5 x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 754 k replacing dnf.noarch 4.22.0-1.fc40 replacing yum.noarch 4.22.0-1.fc40 dnf5-plugins x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 399 k Installing dependencies: fmt x86_64 11.0.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k libdnf5 x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M libdnf5-cli x86_64 5.2.8.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 330 k sdbus-cpp x86_64 1.5.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113 k Transaction Summary ============================================================================================================= Install 6 Packages Total size: 2.8 M Downloading Packages: [SKIPPED] dnf5-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] dnf5-plugins-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] fmt-11.0.2-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] libdnf5-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] libdnf5-cli-5.2.8.1-2.fc42.x86_64.rpm: Already downloaded [SKIPPED] sdbus-cpp-1.5.0-3.fc41.x86_64.rpm: Already downloaded Running transaction check Transaction check succeeded. Running transaction test Error: Transaction test error: file /etc/dnf/dnf.conf from install of libdnf5-5.2.8.1-2.fc42.x86_64 conflicts with file from package dnf-data-4.22.0-1.fc40.noarch Copr build error: Build failed