Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c1d9' (ED25519) to the list of known hosts. 100 8464k 100 8464k 0 0 22.4M 0 --:--:-- --:--:-- --:--:-- 22.4M INFO: Reading stdout from command: md5sum snakemake-8.18.2.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-3iibu5o8/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-3iibu5o8/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728851948.091321 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-3iibu5o8/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-3iibu5o8/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728851948.091321 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-3iibu5o8/snakemake/snakemake.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1728851948.091321/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1728851948.091321/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/b6d47976b509e98cd3f77442bdb804f722c865df165aa368038429ce036d50f0/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/b6d47976b509e98cd3f77442bdb804f722c865df165aa368038429ce036d50f0/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1728851948.091321/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc42.x86_64 dnf5-plugins-5.2.6.2-1.fc42.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 15.1 MiB/s | 22.8 MiB | 00m02s Copr repository 100% | 861.5 KiB/s | 416.1 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 46.6 MiB/s | 14.2 MiB | 00m00s Repositories loaded. 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs x86_64 3.46.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB systemd-libs x86_64 256.7-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB util-linux-core x86_64 2.40.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.4 KiB xz-libs x86_64 1:5.6.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.4 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip x86_64 3.0-41.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 138.0 KiB zstd x86_64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation, 181 MiB extra will be used (install 181 MiB, remove 0 B). [ 1/153] bzip2-0:1.0.8-19.fc41.x86_64 100% | 691.1 KiB/s | 52.5 KiB | 00m00s [ 2/153] bash-0:5.2.32-2.fc42.x86_64 100% | 15.5 MiB/s | 1.8 MiB | 00m00s [ 3/153] cpio-0:2.15-2.fc41.x86_64 100% | 7.1 MiB/s | 285.2 KiB | 00m00s [ 4/153] coreutils-0:9.5-10.fc42.x86_6 100% | 8.7 MiB/s | 1.1 MiB | 00m00s [ 5/153] fedora-release-common-0:42-0. 100% | 1.2 MiB/s | 23.2 KiB | 00m00s [ 6/153] diffutils-0:3.10-8.fc41.x86_6 100% | 18.5 MiB/s | 397.2 KiB | 00m00s [ 7/153] findutils-1:4.10.0-4.fc41.x86 100% | 20.3 MiB/s | 539.8 KiB | 00m00s [ 8/153] glibc-minimal-langpack-0:2.40 100% | 5.9 MiB/s | 121.8 KiB | 00m00s [ 9/153] grep-0:3.11-9.fc41.x86_64 100% | 13.5 MiB/s | 289.7 KiB | 00m00s [ 10/153] gawk-0:5.3.0-4.fc41.x86_64 100% | 26.5 MiB/s | 1.1 MiB | 00m00s [ 11/153] gzip-0:1.13-2.fc41.x86_64 100% | 8.4 MiB/s | 164.1 KiB | 00m00s [ 12/153] info-0:7.1.1-1.fc42.x86_64 100% | 9.9 MiB/s | 182.8 KiB | 00m00s [ 13/153] patch-0:2.7.6-25.fc41.x86_64 100% | 7.1 MiB/s | 131.0 KiB | 00m00s [ 14/153] redhat-rpm-config-0:296-1.fc4 100% | 4.1 MiB/s | 75.7 KiB | 00m00s [ 15/153] rpm-build-0:4.20.0-1.fc42.x86 100% | 4.3 MiB/s | 75.2 KiB | 00m00s [ 16/153] sed-0:4.9-3.fc41.x86_64 100% | 13.7 MiB/s | 309.3 KiB | 00m00s [ 17/153] unzip-0:6.0-64.fc41.x86_64 100% | 9.0 MiB/s | 184.9 KiB | 00m00s [ 18/153] shadow-utils-2:4.16.0-5.fc42. 100% | 25.1 MiB/s | 1.3 MiB | 00m00s [ 19/153] tar-2:1.35-4.fc41.x86_64 100% | 17.0 MiB/s | 852.1 KiB | 00m00s [ 20/153] which-0:2.21-42.fc41.x86_64 100% | 2.4 MiB/s | 41.6 KiB | 00m00s [ 21/153] xz-1:5.6.3-2.fc42.x86_64 100% | 21.5 MiB/s | 461.7 KiB | 00m00s [ 22/153] util-linux-0:2.40.2-8.fc42.x8 100% | 24.8 MiB/s | 1.1 MiB | 00m00s [ 23/153] xz-libs-1:5.6.3-2.fc42.x86_64 100% | 6.1 MiB/s | 111.9 KiB | 00m00s [ 24/153] audit-libs-0:4.0.2-1.fc41.x86 100% | 6.8 MiB/s | 126.2 KiB | 00m00s [ 25/153] authselect-libs-0:1.5.0-8.fc4 100% | 10.5 MiB/s | 204.7 KiB | 00m00s [ 26/153] libblkid-0:2.40.2-8.fc42.x86_ 100% | 6.4 MiB/s | 125.0 KiB | 00m00s [ 27/153] glibc-0:2.40.9000-6.fc42.x86_ 100% | 36.1 MiB/s | 2.2 MiB | 00m00s [ 28/153] libcap-ng-0:0.8.5-3.fc41.x86_ 100% | 1.9 MiB/s | 32.6 KiB | 00m00s [ 29/153] libfdisk-0:2.40.2-8.fc42.x86_ 100% | 7.8 MiB/s | 159.6 KiB | 00m00s [ 30/153] libmount-0:2.40.2-8.fc42.x86_ 100% | 8.0 MiB/s | 156.1 KiB | 00m00s [ 31/153] libselinux-0:3.7-6.fc42.x86_6 100% | 4.8 MiB/s | 88.6 KiB | 00m00s [ 32/153] libsmartcols-0:2.40.2-8.fc42. 100% | 4.6 MiB/s | 83.9 KiB | 00m00s [ 33/153] libuuid-0:2.40.2-8.fc42.x86_6 100% | 1.7 MiB/s | 29.0 KiB | 00m00s [ 34/153] ncurses-libs-0:6.5-2.20240629 100% | 16.3 MiB/s | 334.0 KiB | 00m00s [ 35/153] pam-libs-0:1.6.1-6.fc42.x86_6 100% | 2.8 MiB/s | 57.2 KiB | 00m00s [ 36/153] pam-0:1.6.1-6.fc42.x86_64 100% | 18.7 MiB/s | 518.0 KiB | 00m00s [ 37/153] readline-0:8.2-11.fc42.x86_64 100% | 11.6 MiB/s | 213.4 KiB | 00m00s [ 38/153] zlib-ng-compat-0:2.1.7-3.fc42 100% | 3.5 MiB/s | 77.9 KiB | 00m00s [ 39/153] systemd-libs-0:256.7-1.fc42.x 100% | 17.0 MiB/s | 731.9 KiB | 00m00s [ 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00m00s [ 53/153] file-0:5.45-7.fc41.x86_64 100% | 2.3 MiB/s | 49.1 KiB | 00m00s [ 54/153] libarchive-0:3.7.6-1.fc42.x86 100% | 14.4 MiB/s | 413.7 KiB | 00m00s [ 55/153] pkgconf-pkg-config-0:2.3.0-1. 100% | 526.9 KiB/s | 10.0 KiB | 00m00s [ 56/153] popt-0:1.19-7.fc41.x86_64 100% | 3.4 MiB/s | 59.3 KiB | 00m00s [ 57/153] rpm-0:4.20.0-1.fc42.x86_64 100% | 18.8 MiB/s | 519.3 KiB | 00m00s [ 58/153] rpm-build-libs-0:4.20.0-1.fc4 100% | 5.4 MiB/s | 98.7 KiB | 00m00s [ 59/153] rpm-libs-0:4.20.0-1.fc42.x86_ 100% | 14.4 MiB/s | 309.5 KiB | 00m00s [ 60/153] zstd-0:1.5.6-2.fc41.x86_64 100% | 16.8 MiB/s | 481.5 KiB | 00m00s [ 61/153] curl-0:8.10.1-2.fc42.x86_64 100% | 11.4 MiB/s | 221.3 KiB | 00m00s [ 62/153] ansible-srpm-macros-0:1-16.fc 100% | 1.2 MiB/s | 20.8 KiB | 00m00s [ 63/153] build-reproducibility-srpm-ma 100% | 599.1 KiB/s | 10.8 KiB | 00m00s [ 64/153] glibc-gconv-extra-0:2.40.9000 100% | 36.8 MiB/s | 1.7 MiB | 00m00s [ 65/153] dwz-0:0.15-8.fc42.x86_64 100% | 7.5 MiB/s | 139.1 KiB | 00m00s [ 66/153] binutils-0:2.43.1-1.fc42.x86_ 100% | 26.9 MiB/s | 6.4 MiB | 00m00s [ 67/153] efi-srpm-macros-0:5-12.fc41.n 100% | 932.3 KiB/s | 22.4 KiB | 00m00s [ 68/153] fonts-srpm-macros-1:2.0.5-17. 100% | 1.5 MiB/s | 27.0 KiB | 00m00s [ 69/153] fpc-srpm-macros-0:1.3-13.fc41 100% | 497.6 KiB/s | 8.0 KiB | 00m00s [ 70/153] forge-srpm-macros-0:0.4.0-1.f 100% | 1.1 MiB/s | 19.8 KiB | 00m00s [ 71/153] ghc-srpm-macros-0:1.9.2-1.fc4 100% | 569.8 KiB/s | 9.1 KiB | 00m00s [ 72/153] gnat-srpm-macros-0:6-6.fc41.n 100% | 559.5 KiB/s | 9.0 KiB | 00m00s [ 73/153] go-srpm-macros-0:3.6.0-3.fc41 100% | 1.6 MiB/s | 28.0 KiB | 00m00s [ 74/153] kernel-srpm-macros-0:1.0-24.f 100% | 616.8 KiB/s | 9.9 KiB | 00m00s [ 75/153] lua-srpm-macros-0:1-14.fc41.n 100% | 554.9 KiB/s | 8.9 KiB | 00m00s [ 76/153] ocaml-srpm-macros-0:10-3.fc41 100% | 541.1 KiB/s | 9.2 KiB | 00m00s [ 77/153] openblas-srpm-macros-0:2-18.f 100% | 482.2 KiB/s | 7.7 KiB | 00m00s [ 78/153] package-notes-srpm-macros-0:0 100% | 578.2 KiB/s | 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| 26.6 MiB/s | 762.0 KiB | 00m00s [118/153] elfutils-debuginfod-client-0: 100% | 2.0 MiB/s | 37.2 KiB | 00m00s [119/153] elfutils-libs-0:0.191-8.fc41. 100% | 13.2 MiB/s | 257.5 KiB | 00m00s [120/153] libffi-0:3.4.6-3.fc42.x86_64 100% | 2.3 MiB/s | 40.0 KiB | 00m00s [121/153] libstdc++-0:14.2.1-4.fc42.x86 100% | 19.7 MiB/s | 888.0 KiB | 00m00s [122/153] p11-kit-0:0.25.5-4.fc42.x86_6 100% | 18.7 MiB/s | 478.3 KiB | 00m00s [123/153] p11-kit-trust-0:0.25.5-4.fc42 100% | 6.8 MiB/s | 133.2 KiB | 00m00s [124/153] coreutils-common-0:9.5-10.fc4 100% | 29.1 MiB/s | 2.1 MiB | 00m00s [125/153] alternatives-0:1.30-1.fc41.x8 100% | 2.3 MiB/s | 42.5 KiB | 00m00s [126/153] add-determinism-0:0.4.0-1.fc4 100% | 30.3 MiB/s | 901.0 KiB | 00m00s [127/153] jansson-0:2.13.1-10.fc41.x86_ 100% | 2.6 MiB/s | 44.4 KiB | 00m00s [128/153] lua-libs-0:5.4.6-6.fc41.x86_6 100% | 6.8 MiB/s | 132.0 KiB | 00m00s [129/153] sqlite-libs-0:3.46.0-4.fc41.x 100% | 23.2 MiB/s | 712.4 KiB | 00m00s [130/153] libgomp-0:14.2.1-4.fc42.x86_6 100% | 13.3 MiB/s | 355.3 KiB | 00m00s [131/153] rpm-sequoia-0:1.7.0-2.fc41.x8 100% | 20.8 MiB/s | 892.5 KiB | 00m00s [132/153] pcre2-syntax-0:10.44-1.fc41.1 100% | 7.7 MiB/s | 149.9 KiB | 00m00s [133/153] libtasn1-0:4.19.0-9.fc41.x86_ 100% | 4.3 MiB/s | 74.2 KiB | 00m00s [134/153] fedora-gpg-keys-0:42-0.2.noar 100% | 6.7 MiB/s | 123.3 KiB | 00m00s [135/153] fedora-repos-rawhide-0:42-0.2 100% | 514.1 KiB/s | 8.7 KiB | 00m00s [136/153] elfutils-default-yama-scope-0 100% | 769.0 KiB/s | 12.3 KiB | 00m00s [137/153] fedora-release-0:42-0.4.noarc 100% | 776.9 KiB/s | 12.4 KiB | 00m00s [138/153] xxhash-libs-0:0.8.2-4.fc42.x8 100% | 1.8 MiB/s | 36.8 KiB | 00m00s [139/153] fedora-release-identity-basic 100% | 826.4 KiB/s | 13.2 KiB | 00m00s [140/153] libcurl-0:8.10.1-2.fc42.x86_6 100% | 13.4 MiB/s | 371.3 KiB | 00m00s [141/153] libbrotli-0:1.1.0-5.fc41.x86_ 100% | 12.3 MiB/s | 340.5 KiB | 00m00s [142/153] libidn2-0:2.3.7-2.fc41.x86_64 100% | 6.1 MiB/s | 112.6 KiB | 00m00s [143/153] libnghttp2-0:1.63.0-1.fc42.x8 100% | 4.2 MiB/s | 76.7 KiB | 00m00s [144/153] libpsl-0:0.21.5-4.fc41.x86_64 100% | 3.7 MiB/s | 64.1 KiB | 00m00s [145/153] gdb-minimal-0:15.1-2.fc42.x86 100% | 46.9 MiB/s | 4.3 MiB | 00m00s [146/153] libssh-0:0.11.1-1.fc42.x86_64 100% | 10.3 MiB/s | 231.9 KiB | 00m00s [147/153] openldap-0:2.6.8-5.fc41.x86_6 100% | 12.5 MiB/s | 255.6 KiB | 00m00s [148/153] libevent-0:2.1.12-14.fc41.x86 100% | 12.0 MiB/s | 257.5 KiB | 00m00s [149/153] libtool-ltdl-0:2.4.7-12.fc41. 100% | 2.0 MiB/s | 35.6 KiB | 00m00s [150/153] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 21.6 MiB/s | 794.9 KiB | 00m00s [151/153] libssh-config-0:0.11.1-1.fc42 100% | 586.6 KiB/s | 9.4 KiB | 00m00s [152/153] publicsuffix-list-dafsa-0:202 100% | 3.3 MiB/s | 58.3 KiB | 00m00s [153/153] libunistring-0:1.1-8.fc41.x86 100% | 20.5 MiB/s | 544.8 KiB | 00m00s -------------------------------------------------------------------------------- [153/153] Total 100% | 37.5 MiB/s | 52.7 MiB | 00m01s Running transaction [ 1/155] Verify package files 100% | 780.0 B/s | 153.0 B | 00m00s [ 2/155] Prepare transaction 100% | 1.8 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-4. 100% | 134.9 MiB/s | 276.3 KiB | 00m00s [ 4/155] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 5/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/155] Installing fedora-release-ide 100% | 929.7 KiB/s | 952.0 B | 00m00s [ 7/155] Installing fedora-gpg-keys-0: 100% | 21.0 MiB/s | 172.2 KiB | 00m00s [ 8/155] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/155] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/155] Installing fedora-release-com 100% | 11.6 MiB/s | 23.8 KiB | 00m00s [ 11/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/155] Installing setup-0:2.15.0-5.f 100% | 54.5 MiB/s | 726.1 KiB | 00m00s [ 13/155] Installing filesystem-0:3.18- 100% | 1.7 MiB/s | 212.6 KiB | 00m00s [ 14/155] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/155] Installing pcre2-syntax-0:10. 100% | 124.1 MiB/s | 254.1 KiB | 00m00s [ 16/155] Installing coreutils-common-0 100% | 266.4 MiB/s | 11.2 MiB | 00m00s [ 17/155] Installing ncurses-base-0:6.5 100% | 38.2 MiB/s | 351.7 KiB | 00m00s [ 18/155] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 19/155] Installing ncurses-libs-0:6.5 100% | 137.0 MiB/s | 981.8 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 20/155] Installing glibc-0:2.40.9000- 100% | 142.6 MiB/s | 6.7 MiB | 00m00s [ 21/155] Installing bash-0:5.2.32-2.fc 100% | 263.5 MiB/s | 8.2 MiB | 00m00s [ 22/155] Installing glibc-common-0:2.4 100% | 117.5 MiB/s | 1.1 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 23/155] Installing glibc-gconv-extra- 100% | 130.4 MiB/s | 8.2 MiB | 00m00s [ 24/155] Installing zlib-ng-compat-0:2 100% | 135.5 MiB/s | 138.8 KiB | 00m00s [ 25/155] Installing xz-libs-1:5.6.3-2. 100% | 107.2 MiB/s | 219.5 KiB | 00m00s [ 26/155] Installing bzip2-libs-0:1.0.8 100% | 39.9 MiB/s | 81.8 KiB | 00m00s [ 27/155] Installing libuuid-0:2.40.2-8 100% | 20.8 MiB/s | 42.5 KiB | 00m00s [ 28/155] Installing readline-0:8.2-11. 100% | 161.2 MiB/s | 495.3 KiB | 00m00s [ 29/155] Installing popt-0:1.19-7.fc41 100% | 28.0 MiB/s | 143.5 KiB | 00m00s [ 30/155] Installing libblkid-0:2.40.2- 100% | 128.7 MiB/s | 263.6 KiB | 00m00s [ 31/155] Installing libattr-0:2.5.2-4. 100% | 28.8 MiB/s | 29.5 KiB | 00m00s [ 32/155] Installing libacl-0:2.3.2-2.f 100% | 39.8 MiB/s | 40.7 KiB | 00m00s [ 33/155] Installing libxcrypt-0:4.4.36 100% | 131.6 MiB/s | 269.5 KiB | 00m00s [ 34/155] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.2 KiB | 00m00s [ 35/155] Installing elfutils-libelf-0: 100% | 233.8 MiB/s | 1.2 MiB | 00m00s [ 36/155] Installing gmp-1:6.3.0-2.fc41 100% | 198.6 MiB/s | 813.7 KiB | 00m00s [ 37/155] Installing libstdc++-0:14.2.1 100% | 252.2 MiB/s | 2.8 MiB | 00m00s [ 38/155] Installing libeconf-0:0.6.2-3 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [ 39/155] Installing gdbm-libs-1:1.23-7 100% | 120.7 MiB/s | 123.6 KiB | 00m00s [ 40/155] Installing mpfr-0:4.2.1-5.fc4 100% | 203.5 MiB/s | 833.7 KiB | 00m00s [ 41/155] Installing gawk-0:5.3.0-4.fc4 100% | 192.4 MiB/s | 1.7 MiB | 00m00s [ 42/155] Installing dwz-0:0.15-8.fc42. 100% | 146.8 MiB/s | 300.6 KiB | 00m00s [ 43/155] Installing unzip-0:6.0-64.fc4 100% | 127.0 MiB/s | 390.3 KiB | 00m00s [ 44/155] Installing file-libs-0:5.45-7 100% | 473.0 MiB/s | 9.9 MiB | 00m00s [ 45/155] Installing file-0:5.45-7.fc41 100% | 7.9 MiB/s | 105.0 KiB | 00m00s [ 46/155] Installing crypto-policies-0: 100% | 14.5 MiB/s | 163.3 KiB | 00m00s [ 47/155] Installing libcap-ng-0:0.8.5- 100% | 69.4 MiB/s | 71.0 KiB | 00m00s [ 48/155] Installing audit-libs-0:4.0.2 100% | 162.8 MiB/s | 333.4 KiB | 00m00s [ 49/155] Installing pam-libs-0:1.6.1-6 100% | 69.0 MiB/s | 141.3 KiB | 00m00s [ 50/155] Installing libcap-0:2.70-4.fc 100% | 73.3 MiB/s | 225.2 KiB | 00m00s [ 51/155] Installing systemd-libs-0:256 100% | 226.4 MiB/s | 2.0 MiB | 00m00s [ 52/155] Installing libsmartcols-0:2.4 100% | 177.1 MiB/s | 181.4 KiB | 00m00s [ 53/155] Installing libcom_err-0:1.47. 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 54/155] Installing libsepol-0:3.7-3.f 100% | 266.6 MiB/s | 819.0 KiB | 00m00s [ 55/155] Installing pcre2-0:10.44-1.fc 100% | 213.2 MiB/s | 654.9 KiB | 00m00s [ 56/155] Installing libselinux-0:3.7-6 100% | 178.0 MiB/s | 182.3 KiB | 00m00s [ 57/155] Installing sed-0:4.9-3.fc41.x 100% | 121.3 MiB/s | 869.7 KiB | 00m00s [ 58/155] Installing findutils-1:4.10.0 100% | 185.8 MiB/s | 1.9 MiB | 00m00s [ 59/155] Installing grep-0:3.11-9.fc41 100% | 125.4 MiB/s | 1.0 MiB | 00m00s [ 60/155] Installing xz-1:5.6.3-2.fc42. 100% | 137.5 MiB/s | 1.2 MiB | 00m00s [ 61/155] Installing libmount-0:2.40.2- 100% | 174.3 MiB/s | 356.9 KiB | 00m00s [ 62/155] Installing lz4-libs-0:1.10.0- 100% | 143.1 MiB/s | 146.6 KiB | 00m00s [ 63/155] Installing libffi-0:3.4.6-3.f 100% | 85.7 MiB/s | 87.8 KiB | 00m00s [ 64/155] Installing alternatives-0:1.3 100% | 66.3 MiB/s | 67.9 KiB | 00m00s [ 65/155] Installing lua-libs-0:5.4.6-6 100% | 279.5 MiB/s | 286.2 KiB | 00m00s [ 66/155] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB | 00m00s [ 67/155] Installing p11-kit-0:0.25.5-4 100% | 147.7 MiB/s | 2.2 MiB | 00m00s [ 68/155] Installing libunistring-0:1.1 100% | 247.2 MiB/s | 1.7 MiB | 00m00s [ 69/155] Installing libidn2-0:2.3.7-2. 100% | 81.8 MiB/s | 335.1 KiB | 00m00s [ 70/155] Installing libpsl-0:0.21.5-4. 100% | 79.7 MiB/s | 81.7 KiB | 00m00s [ 71/155] Installing p11-kit-trust-0:0. 100% | 24.8 MiB/s | 405.5 KiB | 00m00s [ 72/155] Installing openssl-libs-1:3.2 100% | 289.9 MiB/s | 7.8 MiB | 00m00s [ 73/155] Installing coreutils-0:9.5-10 100% | 146.8 MiB/s | 5.7 MiB | 00m00s [ 74/155] Installing ca-certificates-0: 100% | 1.2 MiB/s | 2.4 MiB | 00m02s [ 75/155] Installing gzip-0:1.13-2.fc41 100% | 96.3 MiB/s | 394.6 KiB | 00m00s [ 76/155] Installing authselect-libs-0: 100% | 90.8 MiB/s | 837.2 KiB | 00m00s [ 77/155] Installing cracklib-0:2.9.11- 100% | 34.9 MiB/s | 250.3 KiB | 00m00s [ 78/155] Installing libpwquality-0:1.4 100% | 52.5 MiB/s | 430.1 KiB | 00m00s [ 79/155] Installing rpm-sequoia-0:1.7. 100% | 263.0 MiB/s | 2.4 MiB | 00m00s [ 80/155] Installing libevent-0:2.1.12- 100% | 219.6 MiB/s | 899.5 KiB | 00m00s [ 81/155] Installing zstd-0:1.5.6-2.fc4 100% | 281.9 MiB/s | 1.7 MiB | 00m00s [ 82/155] Installing util-linux-core-0: 100% | 138.9 MiB/s | 1.5 MiB | 00m00s [ 83/155] Installing tar-2:1.35-4.fc41. 100% | 227.6 MiB/s | 3.0 MiB | 00m00s [ 84/155] Installing libsemanage-0:3.7- 100% | 97.6 MiB/s | 299.8 KiB | 00m00s [ 85/155] Installing shadow-utils-2:4.1 100% | 125.6 MiB/s | 4.1 MiB | 00m00s [ 86/155] Installing zip-0:3.0-41.fc41. 100% | 172.6 MiB/s | 707.1 KiB | 00m00s [ 87/155] Installing gdbm-1:1.23-7.fc41 100% | 91.0 MiB/s | 465.8 KiB | 00m00s [ 88/155] Installing cyrus-sasl-lib-0:2 100% | 256.2 MiB/s | 2.3 MiB | 00m00s [ 89/155] Installing libfdisk-0:2.40.2- 100% | 177.7 MiB/s | 364.0 KiB | 00m00s [ 90/155] Installing bzip2-0:1.0.8-19.f 100% | 48.9 MiB/s | 100.2 KiB | 00m00s [ 91/155] Installing libxml2-0:2.12.8-2 100% | 244.6 MiB/s | 1.7 MiB | 00m00s [ 92/155] Installing libarchive-0:3.7.6 100% | 228.7 MiB/s | 936.7 KiB | 00m00s [ 93/155] Installing add-determinism-0: 100% | 268.8 MiB/s | 2.4 MiB | 00m00s [ 94/155] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 95/155] Installing sqlite-libs-0:3.46 100% | 238.2 MiB/s | 1.4 MiB | 00m00s [ 96/155] Installing rpm-libs-0:4.20.0- 100% | 236.9 MiB/s | 727.7 KiB | 00m00s [ 97/155] Installing ed-0:1.20.2-2.fc41 100% | 72.8 MiB/s | 149.2 KiB | 00m00s [ 98/155] Installing patch-0:2.7.6-25.f 100% | 131.0 MiB/s | 268.2 KiB | 00m00s [ 99/155] Installing elfutils-default-y 100% | 170.2 KiB/s | 2.0 KiB | 00m00s [100/155] Installing elfutils-libs-0:0. 100% | 158.2 MiB/s | 648.0 KiB | 00m00s [101/155] Installing cpio-0:2.15-2.fc41 100% | 157.1 MiB/s | 1.1 MiB | 00m00s [102/155] Installing diffutils-0:3.10-8 100% | 176.7 MiB/s | 1.6 MiB | 00m00s [103/155] Installing libpkgconf-0:2.3.0 100% | 77.5 MiB/s | 79.3 KiB | 00m00s [104/155] Installing pkgconf-0:2.3.0-1. 100% | 44.5 MiB/s | 91.1 KiB | 00m00s [105/155] Installing keyutils-libs-0:1. 100% | 54.5 MiB/s | 55.8 KiB | 00m00s [106/155] Installing libverto-0:0.3.2-9 100% | 30.5 MiB/s | 31.3 KiB | 00m00s [107/155] Installing krb5-libs-0:1.21.3 100% | 209.0 MiB/s | 2.3 MiB | 00m00s [108/155] Installing libtirpc-0:1.3.5-0 100% | 99.8 MiB/s | 204.5 KiB | 00m00s [109/155] Installing libnsl2-0:2.0.1-2. 100% | 28.8 MiB/s | 59.1 KiB | 00m00s [110/155] Installing pam-0:1.6.1-6.fc42 100% | 81.6 MiB/s | 1.9 MiB | 00m00s [111/155] Installing libssh-0:0.11.1-1. 100% | 186.1 MiB/s | 571.7 KiB | 00m00s [112/155] Installing jansson-0:2.13.1-1 100% | 87.6 MiB/s | 89.7 KiB | 00m00s [113/155] Installing libgomp-0:14.2.1-4 100% | 256.4 MiB/s | 525.2 KiB | 00m00s [114/155] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.5 KiB | 00m00s [115/155] Installing xxhash-libs-0:0.8. 100% | 87.7 MiB/s | 89.8 KiB | 00m00s [116/155] Installing libbrotli-0:1.1.0- 100% | 205.0 MiB/s | 839.9 KiB | 00m00s [117/155] Installing libnghttp2-0:1.63. 100% | 167.2 MiB/s | 171.2 KiB | 00m00s [118/155] Installing libtool-ltdl-0:2.4 100% | 65.7 MiB/s | 67.3 KiB | 00m00s [119/155] Installing openldap-0:2.6.8-5 100% | 158.2 MiB/s | 648.0 KiB | 00m00s [120/155] Installing libcurl-0:8.10.1-2 100% | 205.0 MiB/s | 839.5 KiB | 00m00s [121/155] Installing elfutils-debuginfo 100% | 32.7 MiB/s | 66.9 KiB | 00m00s [122/155] Installing binutils-0:2.43.1- 100% | 267.3 MiB/s | 27.5 MiB | 00m00s [123/155] Installing elfutils-0:0.191-8 100% | 232.7 MiB/s | 2.6 MiB | 00m00s [124/155] Installing gdb-minimal-0:15.1 100% | 309.4 MiB/s | 13.0 MiB | 00m00s [125/155] Installing debugedit-0:5.0-18 100% | 98.6 MiB/s | 202.0 KiB | 00m00s [126/155] Installing curl-0:8.10.1-2.fc 100% | 24.7 MiB/s | 455.8 KiB | 00m00s [127/155] Installing rpm-0:4.20.0-1.fc4 100% | 92.8 MiB/s | 2.5 MiB | 00m00s [128/155] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [129/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [130/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [131/155] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [132/155] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [133/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [134/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [135/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [136/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [138/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [139/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/155] Installing ghc-srpm-macros-0: 100% | 1.0 MiB/s | 1.0 KiB | 00m00s [143/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s [150/155] Installing rpm-build-0:4.20.0 100% | 49.5 MiB/s | 202.9 KiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 90.6 MiB/s | 3.7 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 39.5 MiB/s | 161.9 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 40.2 MiB/s | 82.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [155/155] Installing info-0:7.1.1-1.fc4 100% | 132.6 KiB/s | 362.3 KiB | 00m03s Warning: skipped PGP checks for 153 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.0-1.fc42.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc42.x86_64 authselect-libs-1.5.0-8.fc42.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.x86_64 binutils-2.43.1-1.fc42.x86_64 build-reproducibility-srpm-macros-0.4.0-1.fc42.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-2.fc42.noarch coreutils-9.5-10.fc42.x86_64 coreutils-common-9.5-10.fc42.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241010-1.git8baf557.fc42.noarch curl-8.10.1-2.fc42.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.0-18.fc42.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc42.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.x86_64 elfutils-debuginfod-client-0.191-8.fc41.x86_64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.x86_64 elfutils-libs-0.191-8.fc41.x86_64 fedora-gpg-keys-42-0.2.noarch fedora-release-42-0.4.noarch fedora-release-common-42-0.4.noarch fedora-release-identity-basic-42-0.4.noarch fedora-repos-42-0.2.noarch fedora-repos-rawhide-42-0.2.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-29.fc42.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.1-2.fc42.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-6.fc42.x86_64 glibc-common-2.40.9000-6.fc42.x86_64 glibc-gconv-extra-2.40.9000-6.fc42.x86_64 glibc-minimal-langpack-2.40.9000-6.fc42.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1.1-1.fc42.x86_64 jansson-2.13.1-10.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-2.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.6-1.fc42.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-8.fc42.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-3.fc41.x86_64 libcurl-8.10.1-2.fc42.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-8.fc42.x86_64 libffi-3.4.6-3.fc42.x86_64 libgcc-14.2.1-4.fc42.x86_64 libgomp-14.2.1-4.fc42.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-8.fc42.x86_64 libnghttp2-1.63.0-1.fc42.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc42.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-6.fc42.x86_64 libsemanage-3.7-3.fc42.x86_64 libsepol-3.7-3.fc42.x86_64 libsmartcols-2.40.2-8.fc42.x86_64 libssh-0.11.1-1.fc42.x86_64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-4.fc42.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.5-0.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libuuid-2.40.2-8.fc42.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-7.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-8.fc42.x86_64 p11-kit-0.25.5-4.fc42.x86_64 p11-kit-trust-0.25.5-4.fc42.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc42.x86_64 pam-libs-1.6.1-6.fc42.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.x86_64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-11.fc42.x86_64 redhat-rpm-config-296-1.fc42.noarch rpm-4.20.0-1.fc42.x86_64 rpm-build-4.20.0-1.fc42.x86_64 rpm-build-libs-4.20.0-1.fc42.x86_64 rpm-libs-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.16.0-5.fc42.x86_64 sqlite-libs-3.46.0-4.fc41.x86_64 systemd-libs-256.7-1.fc42.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-8.fc42.x86_64 util-linux-core-2.40.2-8.fc42.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc42.x86_64 xz-5.6.3-2.fc42.x86_64 xz-libs-5.6.3-2.fc42.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc42.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1728851948.091321/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-3iibu5o8/snakemake/snakemake.spec) Config(child) 0 minutes 34 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-8.18.2-4.fc42.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1728851948.091321/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1728851948.091321/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1728851948.091321/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc42.x86_64 dnf5-plugins-5.2.6.2-1.fc42.x86_64 Finish: chroot init Start: build phase for snakemake-8.18.2-4.fc42.src.rpm Start: build setup for snakemake-8.18.2-4.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 73.6 KiB/s | 3.8 KiB | 00m00s fedora 100% | 910.3 KiB/s | 20.9 KiB | 00m00s Copr repository 100% | 74.3 KiB/s | 2.2 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: environment-modules x86_64 5.4.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB graphviz x86_64 12.1.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.9 MiB help2man noarch 1.49.3-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 415.6 KiB python-unversioned-command noarch 3.13.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.0 B python3-boto3 noarch 1.35.39-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB python3-devel x86_64 3.13.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-flask noarch 1:3.0.3-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 863.3 KiB python3-google-cloud-storage noarch 2.14.0-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python3-pandas x86_64 2.2.1-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 42.0 MiB python3-pytest noarch 8.3.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.8 MiB python3-pytest-mock noarch 3.14.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 117.0 KiB python3-snakemake-executor-plugin-cluster-generic noarch 1.0.9-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.7 KiB python3-snakemake-storage-plugin-fs noarch 1.0.6-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30.7 KiB python3-snakemake-storage-plugin-http noarch 0.2.3-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.3 KiB python3-snakemake-storage-plugin-s3 noarch 0.2.12-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.3 KiB singularity-ce x86_64 4.2.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 180.6 MiB strace x86_64 6.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB stress x86_64 1.0.7-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.9 KiB vim-filesystem noarch 2:9.1.737-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB abseil-cpp x86_64 20240722.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB adobe-mappings-cmap noarch 20230622-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 MiB adobe-mappings-cmap-deprecated noarch 20230622-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 582.1 KiB adobe-mappings-pdf noarch 20190401-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.4 MiB avahi-libs x86_64 0.8-30.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 174.2 KiB c-ares x86_64 1.33.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 240.3 KiB cairo x86_64 1.18.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB cairo-gobject x86_64 1.18.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.2 KiB conmon x86_64 2:2.1.12-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 166.4 KiB crun x86_64 1.17-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 523.7 KiB cryptsetup x86_64 2.7.5-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 715.8 KiB cryptsetup-libs x86_64 2.7.5-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB cups-libs x86_64 1:2.4.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 622.9 KiB dbus x86_64 1:1.14.10-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B dbus-broker x86_64 36-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 382.8 KiB dbus-common noarch 1:1.14.10-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.2 KiB dbus-libs x86_64 1:1.14.10-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 368.9 KiB default-fonts-core-sans noarch 4.1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.9 KiB device-mapper x86_64 1.02.201-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 352.5 KiB device-mapper-libs x86_64 1.02.201-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 418.7 KiB expat x86_64 2.6.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 291.5 KiB flexiblas x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 48.5 KiB flexiblas-netlib x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.7 MiB flexiblas-openblas-openmp x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43.3 KiB fontconfig x86_64 2.15.0-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 791.9 KiB fonts-filesystem noarch 1:2.0.5-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B freetype x86_64 2.13.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 850.5 KiB fribidi x86_64 1.0.16-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 194.5 KiB fuse x86_64 2.9.9-22.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 219.0 KiB fuse-common x86_64 3.16.2-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.0 B fuse3 x86_64 3.16.2-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126.0 KiB fuse3-libs x86_64 3.16.2-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 281.5 KiB gd x86_64 2.3.3-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 403.7 KiB gdk-pixbuf2 x86_64 2.42.12-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 64.9 KiB urw-base35-z003-fonts noarch 20200910-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 390.8 KiB xml-common noarch 0.6.3-65.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB yajl x86_64 2.1.0-24.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 90.6 KiB Transaction Summary: Installing: 278 packages Total size of inbound packages is 202 MiB. 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perl-Mozilla-CA-0:20240924-1. 100% | 763.9 KiB/s | 14.5 KiB | 00m00s [246/278] libicu-0:74.2-2.fc41.x86_64 100% | 34.0 MiB/s | 10.4 MiB | 00m00s [247/278] perl-Net-SSLeay-0:1.94-7.fc41 100% | 10.6 MiB/s | 357.6 KiB | 00m00s [248/278] perl-Time-Local-2:1.350-511.f 100% | 1.1 MiB/s | 34.5 KiB | 00m00s [249/278] perl-Class-Struct-0:0.68-511. 100% | 1.3 MiB/s | 22.0 KiB | 00m00s [250/278] perl-File-Path-0:2.18-511.fc4 100% | 2.0 MiB/s | 35.3 KiB | 00m00s [251/278] openblas-0:0.3.26-5.fc41.x86_ 100% | 2.2 MiB/s | 38.7 KiB | 00m00s [252/278] device-mapper-0:1.02.201-1.fc 100% | 6.7 MiB/s | 136.3 KiB | 00m00s [253/278] nss-softokn-freebl-0:3.104.0- 100% | 12.8 MiB/s | 301.9 KiB | 00m00s [254/278] dbus-1:1.14.10-4.fc41.x86_64 100% | 465.4 KiB/s | 7.9 KiB | 00m00s [255/278] systemd-pam-0:256.7-1.fc42.x8 100% | 15.0 MiB/s | 399.9 KiB | 00m00s [256/278] perl-Term-ANSIColor-0:5.01-51 100% | 2.6 MiB/s | 47.7 KiB | 00m00s [257/278] perl-Term-Cap-0:1.18-511.fc41 100% | 1.3 MiB/s | 22.1 KiB | 00m00s [258/278] perl-Pod-Escapes-1:1.07-511.f 100% | 1.1 MiB/s | 19.8 KiB | 00m00s [259/278] ncurses-0:6.5-2.20240629.fc41 100% | 15.7 MiB/s | 419.1 KiB | 00m00s [260/278] perl-if-0:0.61.000-511.fc41.n 100% | 821.3 KiB/s | 14.0 KiB | 00m00s [261/278] perl-AutoLoader-0:5.74-511.fc 100% | 1.2 MiB/s | 21.2 KiB | 00m00s [262/278] perl-IO-Socket-IP-0:0.42-512. 100% | 2.0 MiB/s | 41.8 KiB | 00m00s [263/278] perl-URI-0:5.30-1.fc42.noarch 100% | 5.4 MiB/s | 127.2 KiB | 00m00s [264/278] dbus-broker-0:36-4.fc41.x86_6 100% | 8.8 MiB/s | 171.7 KiB | 00m00s [265/278] perl-Data-Dumper-0:2.189-512. 100% | 3.2 MiB/s | 56.3 KiB | 00m00s [266/278] perl-MIME-Base32-0:1.303-21.f 100% | 1.2 MiB/s | 20.5 KiB | 00m00s [267/278] perl-libnet-0:3.15-512.fc41.n 100% | 6.3 MiB/s | 123.0 KiB | 00m00s [268/278] perl-B-0:1.89-511.fc41.x86_64 100% | 9.6 MiB/s | 176.3 KiB | 00m00s [269/278] dbus-common-1:1.14.10-4.fc41. 100% | 862.4 KiB/s | 14.7 KiB | 00m00s [270/278] perl-Digest-MD5-0:2.59-5.fc41 100% | 2.1 MiB/s | 36.0 KiB | 00m00s [271/278] perl-FileHandle-0:2.05-511.fc 100% | 966.2 KiB/s | 15.5 KiB | 00m00s [272/278] systemd-rpm-macros-0:256.7-1. 100% | 1.9 MiB/s | 33.5 KiB | 00m00s [273/278] perl-Digest-0:1.20-511.fc41.n 100% | 1.4 MiB/s | 24.9 KiB | 00m00s [274/278] python-rpm-macros-0:3.13-3.fc 100% | 1.0 MiB/s | 17.7 KiB | 00m00s [275/278] pyproject-rpm-macros-0:1.15.1 100% | 2.3 MiB/s | 43.3 KiB | 00m00s [276/278] python3-rpm-generators-0:14-1 100% | 1.7 MiB/s | 29.3 KiB | 00m00s [277/278] python3-rpm-macros-0:3.13-3.f 100% | 732.0 KiB/s | 12.4 KiB | 00m00s [278/278] systemd-0:256.7-1.fc42.x86_64 100% | 20.6 MiB/s | 5.6 MiB | 00m00s -------------------------------------------------------------------------------- [278/278] Total 100% | 54.2 MiB/s | 201.7 MiB | 00m04s Running transaction [ 1/280] Verify package files 100% | 409.0 B/s | 278.0 B | 00m01s [ 2/280] Prepare transaction 100% | 1.2 KiB/s | 278.0 B | 00m00s [ 3/280] Installing nspr-0:4.35.0-29.f 100% | 104.8 MiB/s | 322.1 KiB | 00m00s [ 4/280] Installing libpng-2:1.6.44-1. 100% | 120.6 MiB/s | 247.0 KiB | 00m00s [ 5/280] Installing libgpg-error-0:1.5 100% | 145.7 MiB/s | 895.4 KiB | 00m00s [ 6/280] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 7/280] Installing urw-base35-fonts-c 100% | 37.5 MiB/s | 38.4 KiB | 00m00s [ 8/280] Installing libjpeg-turbo-0:3. 100% | 257.4 MiB/s | 790.8 KiB | 00m00s [ 9/280] Installing nss-util-0:3.104.0 100% | 201.1 MiB/s | 206.0 KiB | 00m00s [ 10/280] Installing libwebp-0:1.4.0-4. 100% | 201.8 MiB/s | 826.8 KiB | 00m00s [ 11/280] Installing expat-0:2.6.3-1.fc 100% | 143.3 MiB/s | 293.6 KiB | 00m00s [ 12/280] Installing libseccomp-0:2.5.5 100% | 171.1 MiB/s | 175.2 KiB | 00m00s [ 13/280] Installing libassuan-0:2.5.7- 100% | 161.7 MiB/s | 165.6 KiB | 00m00s [ 14/280] Installing python-rpm-macros- 100% | 22.3 MiB/s | 22.8 KiB | 00m00s [ 15/280] Installing libgfortran-0:14.2 100% | 254.0 MiB/s | 3.0 MiB | 00m00s [ 16/280] Installing tzdata-0:2024a-9.f 100% | 28.1 MiB/s | 1.9 MiB | 00m00s [ 17/280] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 18/280] Installing json-c-0:0.17-4.fc 100% | 81.7 MiB/s | 83.6 KiB | 00m00s [ 19/280] Installing libICE-0:1.1.1-4.f 100% | 89.2 MiB/s | 182.6 KiB | 00m00s [ 20/280] Installing adobe-mappings-cma 100% | 218.4 MiB/s | 14.4 MiB | 00m00s [ 21/280] Installing groff-base-0:1.23. 100% | 113.9 MiB/s | 3.9 MiB | 00m00s [ 22/280] Installing openjpeg-0:2.5.2-4 100% | 145.7 MiB/s | 447.6 KiB | 00m00s [ 23/280] Installing lcms2-0:2.16-4.fc4 100% | 138.8 MiB/s | 426.5 KiB | 00m00s [ 24/280] Installing abseil-cpp-0:20240 100% | 125.9 MiB/s | 2.6 MiB | 00m00s [ 25/280] Installing less-0:661-2.fc41. 100% | 133.0 MiB/s | 408.6 KiB | 00m00s [ 26/280] Installing fuse-common-0:3.16 100% | 0.0 B/s | 292.0 B | 00m00s [ 27/280] Installing fuse3-libs-0:3.16. 100% | 138.0 MiB/s | 282.6 KiB | 00m00s [ 28/280] Installing fuse3-0:3.16.2-4.f 100% | 62.7 MiB/s | 128.4 KiB | 00m00s [ 29/280] Installing fuse-0:2.9.9-22.fc 100% | 72.3 MiB/s | 222.1 KiB | 00m00s [ 30/280] Installing adobe-mappings-cma 100% | 190.5 MiB/s | 585.2 KiB | 00m00s [ 31/280] Installing libSM-0:1.2.4-4.fc 100% | 4.0 MiB/s | 98.7 KiB | 00m00s [ 32/280] Installing tpm2-tss-0:4.1.3-3 100% | 158.1 MiB/s | 1.6 MiB | 00m00s [ 33/280] Installing pyproject-rpm-macr 100% | 108.6 MiB/s | 111.2 KiB | 00m00s [ 34/280] Installing graphviz-libs-0:12 100% | 204.5 MiB/s | 1.2 MiB | 00m00s [ 35/280] Installing nss-softokn-freebl 100% | 191.9 MiB/s | 785.8 KiB | 00m00s [ 36/280] Installing nss-softokn-0:3.10 100% | 269.6 MiB/s | 1.9 MiB | 00m00s [ 37/280] Installing nss-sysinit-0:3.10 100% | 22.7 MiB/s | 23.3 KiB | 00m00s [ 38/280] Installing nss-0:3.104.0-1.fc 100% | 110.7 MiB/s | 1.9 MiB | 00m00s [ 39/280] Installing urw-base35-bookman 100% | 68.2 MiB/s | 1.4 MiB | 00m00s [ 40/280] Installing urw-base35-c059-fo 100% | 93.0 MiB/s | 1.4 MiB | 00m00s [ 41/280] Installing urw-base35-d050000 100% | 7.6 MiB/s | 85.4 KiB | 00m00s [ 42/280] Installing urw-base35-gothic- 100% | 83.1 MiB/s | 1.2 MiB | 00m00s [ 43/280] Installing urw-base35-nimbus- 100% | 80.9 MiB/s | 1.1 MiB | 00m00s [ 44/280] Installing urw-base35-nimbus- 100% | 91.1 MiB/s | 1.4 MiB | 00m00s [ 45/280] Installing urw-base35-nimbus- 100% | 133.0 MiB/s | 2.4 MiB | 00m00s [ 46/280] Installing urw-base35-p052-fo 100% | 99.2 MiB/s | 1.5 MiB | 00m00s [ 47/280] Installing urw-base35-standar 100% | 6.4 MiB/s | 66.0 KiB | 00m00s [ 48/280] Installing urw-base35-z003-fo 100% | 34.8 MiB/s | 391.8 KiB | 00m00s [ 49/280] Installing urw-base35-fonts-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 50/280] Installing abattis-cantarell- 100% | 94.9 MiB/s | 194.4 KiB | 00m00s [ 51/280] Installing google-droid-sans- 100% | 272.1 MiB/s | 6.3 MiB | 00m00s [ 52/280] Installing libgcrypt-0:1.11.0 100% | 257.0 MiB/s | 1.5 MiB | 00m00s [ 53/280] Installing libksba-0:1.6.7-2. 100% | 130.5 MiB/s | 401.0 KiB | 00m00s [ 54/280] Installing dbus-common-1:1.14 100% | 410.6 KiB/s | 13.6 KiB | 00m00s [ 55/280] Installing dbus-broker-0:36-4 100% | 31.4 MiB/s | 385.3 KiB | 00m00s [ 56/280] Installing dbus-1:1.14.10-4.f 100% | 0.0 B/s | 124.0 B | 00m00s [ 57/280] Installing systemd-pam-0:256. 100% | 155.6 MiB/s | 1.1 MiB | 00m00s [ 58/280] Installing systemd-0:256.7-1. 100% | 60.4 MiB/s | 17.1 MiB | 00m00s [ 59/280] Installing device-mapper-libs 100% | 136.7 MiB/s | 419.9 KiB | 00m00s [ 60/280] Installing device-mapper-0:1. 100% | 115.9 MiB/s | 356.1 KiB | 00m00s [ 61/280] Installing cryptsetup-libs-0: 100% | 234.4 MiB/s | 2.3 MiB | 00m00s [ 62/280] Installing cryptsetup-0:2.7.5 100% | 102.2 MiB/s | 732.6 KiB | 00m00s [ 63/280] Installing ncurses-0:6.5-2.20 100% | 154.8 MiB/s | 633.9 KiB | 00m00s [ 64/280] Installing perl-Digest-0:1.20 100% | 36.2 MiB/s | 37.1 KiB | 00m00s [ 65/280] Installing perl-B-0:1.89-511. 100% | 163.2 MiB/s | 501.3 KiB | 00m00s [ 66/280] Installing perl-FileHandle-0: 100% | 0.0 B/s | 9.8 KiB | 00m00s [ 67/280] Installing perl-Digest-MD5-0: 100% | 60.2 MiB/s | 61.7 KiB | 00m00s [ 68/280] Installing perl-MIME-Base32-0 100% | 31.4 MiB/s | 32.2 KiB | 00m00s [ 69/280] Installing perl-Data-Dumper-0 100% | 110.9 MiB/s | 113.6 KiB | 00m00s [ 70/280] Installing perl-libnet-0:3.15 100% | 95.9 MiB/s | 294.7 KiB | 00m00s [ 71/280] Installing perl-AutoLoader-0: 100% | 0.0 B/s | 20.9 KiB | 00m00s [ 72/280] Installing perl-IO-Socket-IP- 100% | 98.1 MiB/s | 100.5 KiB | 00m00s [ 73/280] Installing perl-URI-0:5.30-1. 100% | 52.6 MiB/s | 269.5 KiB | 00m00s [ 74/280] Installing perl-Text-Tabs+Wra 100% | 23.3 MiB/s | 23.9 KiB | 00m00s [ 75/280] Installing perl-locale-0:1.12 100% | 0.0 B/s | 6.9 KiB | 00m00s [ 76/280] Installing perl-Mozilla-CA-0: 100% | 11.1 MiB/s | 11.3 KiB | 00m00s [ 77/280] Installing perl-Time-Local-2: 100% | 68.9 MiB/s | 70.6 KiB | 00m00s [ 78/280] Installing perl-File-Path-0:2 100% | 63.0 MiB/s | 64.5 KiB | 00m00s [ 79/280] Installing perl-Pod-Escapes-1 100% | 25.3 MiB/s | 25.9 KiB | 00m00s [ 80/280] Installing perl-if-0:0.61.000 100% | 6.1 MiB/s | 6.2 KiB | 00m00s [ 81/280] Installing perl-Net-SSLeay-0: 100% | 151.4 MiB/s | 1.4 MiB | 00m00s [ 82/280] Installing perl-IO-Socket-SSL 100% | 172.7 MiB/s | 707.4 KiB | 00m00s [ 83/280] Installing perl-POSIX-0:2.20- 100% | 115.4 MiB/s | 236.4 KiB | 00m00s [ 84/280] Installing perl-IPC-Open3-0:1 100% | 22.7 MiB/s | 23.3 KiB | 00m00s [ 85/280] Installing perl-Class-Struct- 100% | 0.0 B/s | 25.9 KiB | 00m00s [ 86/280] Installing perl-File-Temp-1:0 100% | 160.2 MiB/s | 164.1 KiB | 00m00s [ 87/280] Installing perl-Term-ANSIColo 100% | 96.9 MiB/s | 99.2 KiB | 00m00s [ 88/280] Installing perl-Term-Cap-0:1. 100% | 29.9 MiB/s | 30.6 KiB | 00m00s [ 89/280] Installing perl-HTTP-Tiny-0:0 100% | 75.3 MiB/s | 154.2 KiB | 00m00s [ 90/280] Installing perl-Pod-Simple-1: 100% | 139.3 MiB/s | 570.5 KiB | 00m00s [ 91/280] Installing perl-Symbol-0:1.09 100% | 0.0 B/s | 7.2 KiB | 00m00s [ 92/280] Installing perl-SelectSaver-0 100% | 0.0 B/s | 2.6 KiB | 00m00s [ 93/280] Installing perl-Socket-4:2.03 100% | 61.6 MiB/s | 126.1 KiB | 00m00s [ 94/280] Installing perl-File-stat-0:1 100% | 0.0 B/s | 13.1 KiB | 00m00s [ 95/280] Installing perl-Pod-Perldoc-0 100% | 55.1 MiB/s | 169.3 KiB | 00m00s [ 96/280] Installing perl-podlators-1:6 100% | 104.6 MiB/s | 321.4 KiB | 00m00s [ 97/280] Installing perl-Text-ParseWor 100% | 14.2 MiB/s | 14.6 KiB | 00m00s [ 98/280] Installing perl-Fcntl-0:1.18- 100% | 48.9 MiB/s | 50.1 KiB | 00m00s [ 99/280] Installing perl-base-0:2.27-5 100% | 0.0 B/s | 12.9 KiB | 00m00s [100/280] Installing perl-mro-0:1.29-51 100% | 45.6 MiB/s | 46.7 KiB | 00m00s [101/280] Installing perl-overloading-0 100% | 0.0 B/s | 5.5 KiB | 00m00s [102/280] Installing perl-IO-0:1.55-511 100% | 75.8 MiB/s | 155.3 KiB | 00m00s [103/280] Installing perl-Pod-Usage-4:2 100% | 84.3 MiB/s | 86.3 KiB | 00m00s [104/280] Installing perl-Errno-0:1.38- 100% | 0.0 B/s | 8.8 KiB | 00m00s [105/280] Installing perl-Scalar-List-U 100% | 73.2 MiB/s | 149.9 KiB | 00m00s [106/280] Installing perl-constant-0:1. 100% | 26.7 MiB/s | 27.4 KiB | 00m00s [107/280] Installing perl-File-Basename 100% | 0.0 B/s | 14.6 KiB | 00m00s [108/280] Installing perl-Getopt-Std-0: 100% | 0.0 B/s | 11.7 KiB | 00m00s [109/280] Installing perl-MIME-Base64-0 100% | 47.2 MiB/s | 48.4 KiB | 00m00s [110/280] Installing perl-parent-1:0.24 100% | 10.5 MiB/s | 10.7 KiB | 00m00s [111/280] Installing perl-vars-0:1.05-5 100% | 0.0 B/s | 4.3 KiB | 00m00s [112/280] Installing perl-overload-0:1. 100% | 70.3 MiB/s | 71.9 KiB | 00m00s [113/280] Installing perl-Storable-1:3. 100% | 114.3 MiB/s | 234.0 KiB | 00m00s [114/280] Installing perl-Getopt-Long-1 100% | 143.8 MiB/s | 147.2 KiB | 00m00s [115/280] Installing perl-Carp-0:1.54-5 100% | 46.6 MiB/s | 47.7 KiB | 00m00s [116/280] Installing perl-Exporter-0:5. 100% | 54.3 MiB/s | 55.6 KiB | 00m00s [117/280] Installing perl-PathTools-0:3 100% | 90.1 MiB/s | 184.6 KiB | 00m00s [118/280] Installing perl-DynaLoader-0: 100% | 31.7 MiB/s | 32.5 KiB | 00m00s [119/280] Installing perl-Encode-4:3.21 100% | 235.9 MiB/s | 4.7 MiB | 00m00s [120/280] Installing perl-libs-4:5.40.0 100% | 158.1 MiB/s | 10.0 MiB | 00m00s [121/280] Installing perl-interpreter-4 100% | 121.1 MiB/s | 124.0 KiB | 00m00s [122/280] Installing openblas-0:0.3.26- 100% | 95.5 MiB/s | 97.8 KiB | 00m00s [123/280] Installing openblas-openmp-0: 100% | 463.2 MiB/s | 39.4 MiB | 00m00s [124/280] Installing libicu-0:74.2-2.fc 100% | 312.1 MiB/s | 35.0 MiB | 00m00s [125/280] Installing re2-1:20240702-19. 100% | 183.1 MiB/s | 562.4 KiB | 00m00s [126/280] Installing dbus-libs-1:1.14.1 100% | 180.7 MiB/s | 370.0 KiB | 00m00s [127/280] Installing avahi-libs-0:0.8-3 100% | 86.3 MiB/s | 176.8 KiB | 00m00s [128/280] Installing npth-0:1.7-2.fc41. 100% | 49.5 MiB/s | 50.7 KiB | 00m00s [129/280] Installing nettle-0:3.10-3.fc 100% | 194.4 MiB/s | 796.1 KiB | 00m00s [130/280] Installing gnutls-0:3.8.7-4.f 100% | 249.4 MiB/s | 3.2 MiB | 00m00s [131/280] Installing glib2-0:2.82.1-2.f 100% | 267.1 MiB/s | 14.7 MiB | 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Finish: build setup for snakemake-8.18.2-4.fc42.src.rpm Start: rpmbuild snakemake-8.18.2-4.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.dqpO3I + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + test -d /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/rm -rf /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.em3e0p + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd /builddir/build/BUILD/snakemake-8.18.2-build + rm -rf snakemake-8.18.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-8.18.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd 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recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_b') recursedown('./tests/test_scheduler_sequential_all_cores') recursedown('./tests/test_scheduler_sequential_all_cores/expected-results') recursedown('./tests/test_script') recursedown('./tests/test_script/envs') recursedown('./tests/test_script/expected-results') recursedown('./tests/test_script/scripts') ./setup.py: no change ./versioneer.py: no change ./.github/workflows/scripts/sacct-proxy.py: updating ./apidocs/conf.py: updating ./docs/conf.py: updating ./examples/hello-world/scripts/plot-hist.py: no change ./snakemake/__init__.py: no change ./snakemake/__main__.py: no change ./snakemake/_version.py: no change ./snakemake/api.py: no change ./snakemake/benchmark.py: no change ./snakemake/checkpoints.py: no change ./snakemake/cli.py: no change ./snakemake/cwl.py: no change ./snakemake/dag.py: no change ./snakemake/decorators.py: no change ./snakemake/exceptions.py: no change ./snakemake/gui.py: no 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no change ./snakemake/linting/__init__.py: no change ./snakemake/linting/links.py: no change ./snakemake/linting/rules.py: no change ./snakemake/linting/snakefiles.py: no change ./snakemake/remote/AzBlob.py: no change ./snakemake/remote/EGA.py: no change ./snakemake/remote/FTP.py: no change ./snakemake/remote/GS.py: no change ./snakemake/remote/HTTP.py: no change ./snakemake/remote/NCBI.py: no change ./snakemake/remote/S3.py: no change ./snakemake/remote/S3Mocked.py: no change ./snakemake/remote/SFTP.py: no change ./snakemake/remote/XRootD.py: no change ./snakemake/remote/__init__.py: no change ./snakemake/remote/dropbox.py: no change ./snakemake/remote/gfal.py: no change ./snakemake/remote/gridftp.py: no change ./snakemake/remote/iRODS.py: no change ./snakemake/remote/webdav.py: no change ./snakemake/remote/zenodo.py: no change ./snakemake/report/__init__.py: no change ./snakemake/report/common.py: no change ./snakemake/report/rulegraph_spec.py: no change 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./tests/test_deploy_sources/scripts/test.py: no change ./tests/test_filegraph/scripts/vis.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_a.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_all.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_b.py: no change ./tests/test_get_log_both/wrapper.py: no change ./tests/test_get_log_complex/wrapper.py: no change ./tests/test_get_log_none/wrapper.py: no change ./tests/test_get_log_stderr/wrapper.py: no change ./tests/test_get_log_stdout/wrapper.py: no change ./tests/test_github_issue1158/qsub.py: updating ./tests/test_github_issue627/job.py: updating ./tests/test_github_issue_14/local_script.py: no change ./tests/test_github_issue_14/pythonTest.py: updating ./tests/test_handover/script.py: no change ./tests/test_issue1046/my_wrapper/wrapper.py: no change ./tests/test_issue916/local_script.py: no change ./tests/test_issue916/pythonTest.py: updating 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change ./tests/test_string_resources/qsub.py: updating ./tests/test_tibanna/cleanup.py: no change ./tests/test_tibanna/scripts/step2.py: no change recursedown('./tests/test_script_pre_py39') recursedown('./tests/test_script_pre_py39/expected-results') recursedown('./tests/test_script_py') recursedown('./tests/test_script_py/expected-results') recursedown('./tests/test_script_py/scripts') recursedown('./tests/test_service_jobs') recursedown('./tests/test_service_jobs/expected-results') recursedown('./tests/test_set_resources') recursedown('./tests/test_set_resources/expected-results') recursedown('./tests/test_set_resources_complex') recursedown('./tests/test_set_resources_complex/expected-results') recursedown('./tests/test_set_resources_complex/test-profile') recursedown('./tests/test_set_threads') recursedown('./tests/test_set_threads/expected-results') recursedown('./tests/test_shadow') recursedown('./tests/test_shadow/expected-results') recursedown('./tests/test_shadow_copy') recursedown('./tests/test_shadow_copy/expected-results') recursedown('./tests/test_shadow_prefix') recursedown('./tests/test_shadow_prefix/expected-results') recursedown('./tests/test_shadowed_log') recursedown('./tests/test_shadowed_log/expected-results') recursedown('./tests/test_shell') recursedown('./tests/test_shell/expected-results') recursedown('./tests/test_shell_exec') recursedown('./tests/test_shell_exec/expected-results') recursedown('./tests/test_singularity') recursedown('./tests/test_singularity/expected-results') recursedown('./tests/test_singularity_conda') recursedown('./tests/test_singularity_conda/expected-results') recursedown('./tests/test_singularity_global') recursedown('./tests/test_singularity_global/expected-results') recursedown('./tests/test_singularity_module') recursedown('./tests/test_singularity_module/expected-results') recursedown('./tests/test_singularity_none') recursedown('./tests/test_singularity_none/expected-results') recursedown('./tests/test_slurm_mpi') recursedown('./tests/test_slurm_mpi/envs') recursedown('./tests/test_slurm_mpi/expected-results') recursedown('./tests/test_solver') recursedown('./tests/test_solver/expected-results') recursedown('./tests/test_source_path') recursedown('./tests/test_source_path/expected-results') recursedown('./tests/test_source_path/workflow') recursedown('./tests/test_source_path/workflow/resources') recursedown('./tests/test_spaces_in_fnames') recursedown('./tests/test_spaces_in_fnames/expected-results') recursedown('./tests/test_speed') recursedown('./tests/test_storage') recursedown('./tests/test_storage/expected-results') recursedown('./tests/test_storage_cleanup_local') recursedown('./tests/test_storage_cleanup_local/expected-results') recursedown('./tests/test_storage_cleanup_local/expected-results/fs-storage') recursedown('./tests/test_storage_localrule') recursedown('./tests/test_storage_localrule/expected-results') recursedown('./tests/test_storage_localrule/expected-results/fs-storage') recursedown('./tests/test_strict_mode') recursedown('./tests/test_strict_mode/expected-results') recursedown('./tests/test_string_resources') recursedown('./tests/test_string_resources/expected-results') recursedown('./tests/test_subworkflow_config') recursedown('./tests/test_subworkflow_config/expected-results') recursedown('./tests/test_subworkflows') recursedown('./tests/test_subworkflows/expected-results') recursedown('./tests/test_symlink_temp') recursedown('./tests/test_symlink_temp/expected-results') recursedown('./tests/test_symlink_time_handling') recursedown('./tests/test_symlink_time_handling/expected-results') recursedown('./tests/test_temp') recursedown('./tests/test_temp/expected-results') recursedown('./tests/test_temp_expand') recursedown('./tests/test_temp_expand/expected-results') recursedown('./tests/test_template_engine') recursedown('./tests/test_template_engine/expected-results') recursedown('./tests/test_tes') recursedown('./tests/test_tes/expected-results') recursedown('./tests/test_threads') recursedown('./tests/test_threads/expected-results') recursedown('./tests/test_threads0') recursedown('./tests/test_threads0/expected-results') recursedown('./tests/test_tibanna') recursedown('./tests/test_tibanna/expected-results') recursedown('./tests/test_tibanna/scripts') recursedown('./tests/test_tmpdir') recursedown('./tests/test_tmpdir/expected-results') recursedown('./tests/test_touch') recursedown('./tests/test_touch/expected-results') recursedown('./tests/test_touch_pipeline_with_temp_dir') recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results') recursedown('./tests/test_touch_remote_prefix') recursedown('./tests/test_touch_remote_prefix/expected-results') recursedown('./tests/test_touch_with_directories') recursedown('./tests/test_touch_with_directories/expected-results') recursedown('./tests/test_unpack_dict') 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recursedown('./tests/test_workflow_profile') recursedown('./tests/test_workflow_profile/dummy-general-profile') recursedown('./tests/test_workflow_profile/expected-results') recursedown('./tests/test_workflow_profile/workflow') recursedown('./tests/test_workflow_profile/workflow/profiles') recursedown('./tests/test_workflow_profile/workflow/profiles/default') recursedown('./tests/test_wrapper') recursedown('./tests/test_wrapper/expected-results') recursedown('./tests/test_xrootd') recursedown('./tests/test_yaml_config') recursedown('./tests/test_yaml_config/expected-results') + sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py + for editor in nano vim + cp -vp misc/nano/README.md README-nano.md 'misc/nano/README.md' -> 'README-nano.md' + for editor in nano vim + cp -vp misc/vim/README.md README-vim.md 'misc/vim/README.md' -> 'README-vim.md' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.XBHVMF + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement not satisfied: wheel Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 75.1 KiB/s | 3.8 KiB | 00m00s fedora 100% | 615.8 KiB/s | 20.9 KiB | 00m00s Copr repository 100% | 15.8 KiB/s | 2.2 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed. Package "graphviz-12.1.2-1.fc42.x86_64" is already installed.Package Arch Version Repository Size Installing: python3-pip noarch 24.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.4 MiB python3-wheel noarch 1:0.43.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 516.1 KiB Transaction Summary: Installing: 2 packages Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.x86_64" is already installed. Package "python3-boto3-1.35.39-1.fc42.noarch" is already installed. Package "python3-flask-1:3.0.3-6.fc41.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pytest-8.3.3-1.fc42.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc42.noarch" is already installed. Package "strace-6.11-1.fc42.x86_64" is already installed. Package "stress-1.0.7-5.fc41.x86_64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc42.noarch" is already installed. Total size of inbound packages is 3 MiB. Need to download 3 MiB. After this operation, 12 MiB extra will be used (install 12 MiB, remove 0 B). [1/2] python3-wheel-1:0.43.0-4.fc41.noa 100% | 1.8 MiB/s | 151.0 KiB | 00m00s [2/2] python3-pip-0:24.2-2.fc42.noarch 100% | 21.8 MiB/s | 2.5 MiB | 00m00s -------------------------------------------------------------------------------- [2/2] Total 100% | 22.9 MiB/s | 2.7 MiB | 00m00s Running transaction [1/4] Verify package files 100% | 222.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 43.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.43.0 100% | 58.1 MiB/s | 535.1 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [4/4] Installing python3-pip-0:24.2-2.f 100% | 72.0 MiB/s | 11.7 MiB | 00m00s Warning: skipped PGP checks for 2 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.aSi8e8 + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: appdirs Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: immutables Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: connection-pool >=0.0.3 Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: datrie Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: docutils Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: gitpython Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: humanfriendly Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: jsonschema Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: nbformat Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: psutil Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pulp <2.10,>=2.3.1 Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pyyaml Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: smart-open <8.0,>=4.0 Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: stopit Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: tabulate Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: toposort <2.0,>=1.10 Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: yte <2.0,>=1.5.1 Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: dpath <3.0.0,>=2.1.6 Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: conda-inject <2.0,>=1.3.1 Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: slack-sdk ; extra == 'messaging' Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pygments ; extra == 'reports' + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 69.5 KiB/s | 2.2 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 72.2 KiB/s | 3.8 KiB | 00m00s fedora 100% | 837.5 KiB/s | 20.9 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed. Package "graphviz-12.1.2-1.fc42.x86_64" is already installed. Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.x86_64" is already installed. Package "python3-boto3-1.35.39-1.fc42.noarch" is already installed. Package "python3-configargparse-1.7-5.fc41.noarch" is already installed. Package "python3-flask-1:3.0.3-6.fc41.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pip-24.2-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.3-1.fc42.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-reretry-0.11.8-11.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc42.noarch" is already installed. Package "python3-throttler-1.2.2-11.fc41.noarch" is already installed. Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed. Package "python3-wrapt-1.16.0-6.fc41.x86_64" is already installed. Package "strace-6.11-1.fc42.x86_64" is already installed. Package "stress-1.0.7-5.fc41.x86_64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-GitPython noarch 3.1.43-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-appdirs noarch 1.4.4-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.7 KiB python3-conda-inject noarch 1.3.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.6 KiB python3-connection_pool noarch 0.0.3-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.2 KiB python3-datrie x86_64 0.8.2-27.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 444.7 KiB python3-docutils noarch 0.21.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.9 MiB python3-dpath noarch 2.2.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93.3 KiB python3-humanfriendly noarch 10.0-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 544.8 KiB python3-immutables x86_64 0.20-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185.9 KiB python3-jsonschema noarch 4.19.1-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 850.0 KiB python3-nbformat noarch 5.9.2-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 541.7 KiB python3-psutil x86_64 5.9.8-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB python3-pulp noarch 2.8.0-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB python3-pygments noarch 2.18.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.6 MiB python3-pyyaml x86_64 6.0.1-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 791.1 KiB python3-slackclient noarch 3.33.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB python3-smart_open noarch 7.0.5-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 494.1 KiB python3-snakemake-interface-report-plugins noarch 1.0.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31.1 KiB python3-stopit noarch 1.1.2-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65.2 KiB python3-tabulate noarch 0.9.0-10.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 342.0 KiB python3-toposort noarch 1.10-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.5 KiB python3-yte noarch 1.5.4-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 61.0 KiB Installing dependencies: git-core x86_64 2.47.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.6 MiB libcbor x86_64 0.11.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 73.9 KiB libedit x86_64 3.1-53.20240808cvs.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 244.1 KiB libfido2 x86_64 1.15.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 238.2 KiB libyaml x86_64 0.2.5-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134.4 KiB openssh x86_64 9.9p1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB openssh-clients x86_64 9.9p1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.7 MiB python3-attrs noarch 24.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 396.1 KiB python3-boto noarch 2.49.0-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.6 MiB python3-fastjsonschema noarch 2.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 190.8 KiB python3-gitdb noarch 4.0.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 503.9 KiB python3-jsonschema-specifications noarch 2023.11.2-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45.8 KiB python3-jupyter-core noarch 5.7.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 198.7 KiB python3-plac noarch 1.4.3-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 230.2 KiB python3-referencing noarch 0.35.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.0 KiB python3-rpds-py x86_64 0.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 688.2 KiB python3-smmap noarch 5.0.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 199.7 KiB python3-traitlets noarch 5.14.3-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 966.9 KiB python3-zombie-imp noarch 0.0.2-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58.4 KiB Transaction Summary: Installing: 41 packages Total size of inbound packages is 15 MiB. Need to download 15 MiB. After this operation, 68 MiB extra will be used (install 68 MiB, remove 0 B). [ 1/41] python3-dpath-0:2.2.0-2.fc41.no 100% | 574.0 KiB/s | 37.9 KiB | 00m00s [ 2/41] python3-conda-inject-0:1.3.2-3. 100% | 275.9 KiB/s | 18.8 KiB | 00m00s [ 3/41] python3-snakemake-interface-rep 100% | 1.3 MiB/s | 21.2 KiB | 00m00s [ 4/41] python3-pulp-0:2.8.0-6.fc41.noa 100% | 2.6 MiB/s | 233.0 KiB | 00m00s [ 5/41] python3-smart_open-0:7.0.5-1.fc 100% | 3.6 MiB/s | 118.6 KiB | 00m00s [ 6/41] python3-toposort-0:1.10-12.fc41 100% | 1.0 MiB/s | 20.3 KiB | 00m00s [ 7/41] python3-yte-0:1.5.4-6.fc41.noar 100% | 1.7 MiB/s | 31.3 KiB | 00m00s [ 8/41] python3-appdirs-0:1.4.4-24.fc42 100% | 1.3 MiB/s | 23.4 KiB | 00m00s [ 9/41] python3-datrie-0:0.8.2-27.fc41. 100% | 5.9 MiB/s | 158.1 KiB | 00m00s [10/41] python3-docutils-0:0.21.2-1.fc4 100% | 25.4 MiB/s | 1.0 MiB | 00m00s [11/41] python3-GitPython-0:3.1.43-1.fc 100% | 13.9 MiB/s | 384.4 KiB | 00m00s [12/41] python3-humanfriendly-0:10.0-13 100% | 7.5 MiB/s | 137.7 KiB | 00m00s [13/41] python3-immutables-0:0.20-7.fc4 100% | 3.2 MiB/s | 59.4 KiB | 00m00s [14/41] python3-jsonschema-0:4.19.1-6.f 100% | 9.2 MiB/s | 188.4 KiB | 00m00s [15/41] python3-nbformat-0:5.9.2-5.fc41 100% | 6.3 MiB/s | 122.9 KiB | 00m00s [16/41] python3-psutil-0:5.9.8-5.fc42.x 100% | 11.8 MiB/s | 265.1 KiB | 00m00s [17/41] python3-pyyaml-0:6.0.1-18.fc41. 100% | 9.8 MiB/s | 220.6 KiB | 00m00s [18/41] python3-pygments-0:2.18.0-2.fc4 100% | 48.3 MiB/s | 2.4 MiB | 00m00s [19/41] python3-slackclient-0:3.33.1-1. 100% | 22.4 MiB/s | 504.3 KiB | 00m00s [20/41] python3-stopit-0:1.1.2-12.fc41. 100% | 1.4 MiB/s | 25.6 KiB | 00m00s [21/41] python3-tabulate-0:0.9.0-10.fc4 100% | 3.9 MiB/s | 71.8 KiB | 00m00s [22/41] python3-plac-0:1.4.3-4.fc41.noa 100% | 3.6 MiB/s | 62.6 KiB | 00m00s [23/41] libyaml-0:0.2.5-15.fc41.x86_64 100% | 2.4 MiB/s | 59.4 KiB | 00m00s [24/41] python3-boto-0:2.49.0-23.fc41.n 100% | 48.0 MiB/s | 1.7 MiB | 00m00s [25/41] python3-connection_pool-0:0.0.3 100% | 75.6 KiB/s | 17.1 KiB | 00m00s [26/41] python3-fastjsonschema-0:2.20.0 100% | 2.9 MiB/s | 58.5 KiB | 00m00s [27/41] python3-jupyter-core-0:5.7.2-3. 100% | 4.1 MiB/s | 71.4 KiB | 00m00s [28/41] python3-attrs-0:24.2.0-1.fc41.n 100% | 6.4 MiB/s | 118.0 KiB | 00m00s [29/41] python3-traitlets-0:5.14.3-3.fc 100% | 9.3 MiB/s | 200.8 KiB | 00m00s [30/41] python3-jsonschema-specificatio 100% | 1.2 MiB/s | 21.4 KiB | 00m00s [31/41] python3-referencing-0:0.35.1-3. 100% | 4.0 MiB/s | 77.3 KiB | 00m00s [32/41] python3-rpds-py-0:0.20.0-1.fc42 100% | 13.5 MiB/s | 289.8 KiB | 00m00s [33/41] python3-gitdb-0:4.0.11-1.fc42.n 100% | 6.4 MiB/s | 130.3 KiB | 00m00s [34/41] openssh-clients-0:9.9p1-3.fc42. 100% | 18.5 MiB/s | 756.1 KiB | 00m00s [35/41] python3-smmap-0:5.0.1-1.fc42.no 100% | 2.4 MiB/s | 56.0 KiB | 00m00s [36/41] libfido2-0:1.15.0-2.fc41.x86_64 100% | 4.8 MiB/s | 98.1 KiB | 00m00s [37/41] libedit-0:3.1-53.20240808cvs.fc 100% | 4.9 MiB/s | 105.6 KiB | 00m00s [38/41] git-core-0:2.47.0-1.fc42.x86_64 100% | 51.1 MiB/s | 4.9 MiB | 00m00s [39/41] libcbor-0:0.11.0-2.fc41.x86_64 100% | 1.7 MiB/s | 33.1 KiB | 00m00s [40/41] openssh-0:9.9p1-3.fc42.x86_64 100% | 15.5 MiB/s | 349.4 KiB | 00m00s [41/41] python3-zombie-imp-0:0.0.2-7.fc 100% | 1.7 MiB/s | 29.5 KiB | 00m00s -------------------------------------------------------------------------------- [41/41] Total 100% | 31.8 MiB/s | 15.0 MiB | 00m00s Running transaction [ 1/43] Verify package files 100% | 788.0 B/s | 41.0 B | 00m00s [ 2/43] Prepare transaction 100% | 445.0 B/s | 41.0 B | 00m00s [ 3/43] Installing python3-rpds-py-0:0. 100% | 135.2 MiB/s | 692.2 KiB | 00m00s [ 4/43] Installing python3-attrs-0:24.2 100% | 80.2 MiB/s | 410.7 KiB | 00m00s [ 5/43] Installing python3-referencing- 100% | 81.9 MiB/s | 335.6 KiB | 00m00s [ 6/43] Installing python3-traitlets-0: 100% | 137.3 MiB/s | 984.0 KiB | 00m00s [ 7/43] Installing python3-jupyter-core 100% | 50.7 MiB/s | 207.5 KiB | 00m00s [ 8/43] Installing python3-jsonschema-s 100% | 13.5 MiB/s | 55.1 KiB | 00m00s [ 9/43] Installing python3-jsonschema-0 100% | 121.4 MiB/s | 870.3 KiB | 00m00s [10/43] Installing python3-zombie-imp-0 100% | 20.3 MiB/s | 62.4 KiB | 00m00s [11/43] Installing python3-boto-0:2.49. 100% | 123.4 MiB/s | 9.9 MiB | 00m00s [12/43] Installing libcbor-0:0.11.0-2.f 100% | 73.5 MiB/s | 75.3 KiB | 00m00s [13/43] Installing libfido2-0:1.15.0-2. 100% | 117.1 MiB/s | 239.7 KiB | 00m00s [14/43] Installing openssh-0:9.9p1-3.fc 100% | 276.3 MiB/s | 1.4 MiB | 00m00s [15/43] Installing libedit-0:3.1-53.202 100% | 120.0 MiB/s | 245.8 KiB | 00m00s [16/43] Installing openssh-clients-0:9. 100% | 74.5 MiB/s | 2.7 MiB | 00m00s [17/43] Installing git-core-0:2.47.0-1. 100% | 318.9 MiB/s | 22.6 MiB | 00m00s [18/43] Installing python3-smmap-0:5.0. 100% | 67.5 MiB/s | 207.4 KiB | 00m00s [19/43] Installing python3-gitdb-0:4.0. 100% | 84.7 MiB/s | 520.3 KiB | 00m00s [20/43] Installing python3-fastjsonsche 100% | 64.7 MiB/s | 198.8 KiB | 00m00s [21/43] Installing libyaml-0:0.2.5-15.f 100% | 132.6 MiB/s | 135.8 KiB | 00m00s [22/43] Installing python3-pyyaml-0:6.0 100% | 131.0 MiB/s | 804.9 KiB | 00m00s [23/43] Installing python3-plac-0:1.4.3 100% | 114.1 MiB/s | 233.7 KiB | 00m00s [24/43] Installing python3-dpath-0:2.2. 100% | 48.3 MiB/s | 99.0 KiB | 00m00s [25/43] Installing python3-yte-0:1.5.4- 100% | 32.4 MiB/s | 66.3 KiB | 00m00s [26/43] Installing python3-conda-inject 100% | 25.7 MiB/s | 26.3 KiB | 00m00s [27/43] Installing python3-nbformat-0:5 100% | 61.8 MiB/s | 569.9 KiB | 00m00s [28/43] Installing python3-GitPython-0: 100% | 153.8 MiB/s | 1.8 MiB | 00m00s [29/43] Installing python3-smart_open-0 100% | 98.9 MiB/s | 506.4 KiB | 00m00s [30/43] Installing python3-tabulate-0:0 100% | 168.7 MiB/s | 345.5 KiB | 00m00s [31/43] Installing python3-stopit-0:1.1 100% | 22.6 MiB/s | 69.5 KiB | 00m00s [32/43] Installing python3-slackclient- 100% | 87.0 MiB/s | 3.0 MiB | 00m00s [33/43] Installing python3-pygments-0:2 100% | 169.4 MiB/s | 10.8 MiB | 00m00s [34/43] Installing python3-psutil-0:5.9 100% | 241.1 MiB/s | 1.4 MiB | 00m00s [35/43] Installing python3-immutables-0 100% | 62.5 MiB/s | 191.9 KiB | 00m00s [36/43] Installing python3-humanfriendl 100% | 108.7 MiB/s | 556.3 KiB | 00m00s [37/43] Installing python3-docutils-0:0 100% | 140.2 MiB/s | 5.0 MiB | 00m00s [38/43] Installing python3-datrie-0:0.8 100% | 145.4 MiB/s | 446.8 KiB | 00m00s [39/43] Installing python3-connection_p 100% | 23.2 MiB/s | 23.8 KiB | 00m00s [40/43] Installing python3-appdirs-0:1. 100% | 69.2 MiB/s | 70.9 KiB | 00m00s [41/43] Installing python3-toposort-0:1 100% | 30.1 MiB/s | 30.9 KiB | 00m00s [42/43] Installing python3-snakemake-in 100% | 18.7 MiB/s | 38.3 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [43/43] Installing python3-pulp-0:2.8.0 100% | 10.0 MiB/s | 1.1 MiB | 00m00s Warning: skipped PGP checks for 41 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.KLWtS5 + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.20) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.21.2) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.43) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.2) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.8) Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.10,>=2.3.1 (installed: pulp 2.8.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open <8.0,>=4.0 (installed: smart-open 7.0.5) Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 (installed: snakemake-interface-report-plugins 1.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort <2.0,>=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.2.0) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.2) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.33.1) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.18.0) + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 872.4 KiB/s | 20.9 KiB | 00m00s Copr repository 100% | 47.9 KiB/s | 2.2 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 73.6 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed. Package "graphviz-12.1.2-1.fc42.x86_64" is already installed. Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.x86_64" is already installed. Package "python3-appdirs-1.4.4-24.fc42.noarch" is already installed. Package "python3-boto3-1.35.39-1.fc42.noarch" is already installed. Package "python3-configargparse-1.7-5.fc41.noarch" is already installed. Package "python3-connection_pool-0.0.3-13.fc41.noarch" is already installed. Package "python3-datrie-0.8.2-27.fc41.x86_64" is already installed. Package "python3-docutils-0.21.2-1.fc42.noarch" is already installed. Package "python3-flask-1:3.0.3-6.fc41.noarch" is already installed. Package "python3-GitPython-3.1.43-1.fc42.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-humanfriendly-10.0-13.fc41.noarch" is already installed. Package "python3-immutables-0.20-7.fc41.x86_64" is already installed. Package "python3-jsonschema-4.19.1-6.fc41.noarch" is already installed. Package "python3-nbformat-5.9.2-5.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pip-24.2-2.fc42.noarch" is already installed. Package "python3-psutil-5.9.8-5.fc42.x86_64" is already installed. Package "python3-pygments-2.18.0-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.3-1.fc42.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-pyyaml-6.0.1-18.fc41.x86_64" is already installed. Package "python3-reretry-0.11.8-11.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-slackclient-3.33.1-1.fc42.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc42.noarch" is already installed. Package "python3-stopit-1.1.2-12.fc41.noarch" is already installed. Package "python3-tabulate-0.9.0-10.fc41.noarch" is already installed. Package "python3-throttler-1.2.2-11.fc41.noarch" is already installed. Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed. Package "python3-wrapt-1.16.0-6.fc41.x86_64" is already installed. Package "strace-6.11-1.fc42.x86_64" is already installed. Package "stress-1.0.7-5.fc41.x86_64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc42.noarch" is already installed. Nothing to do. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.JPArlP + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.20) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.21.2) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.43) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.2) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.8) Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.10,>=2.3.1 (installed: pulp 2.8.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open <8.0,>=4.0 (installed: smart-open 7.0.5) Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 (installed: snakemake-interface-report-plugins 1.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort <2.0,>=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.2.0) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.2) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.33.1) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.18.0) + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.JyQoUF + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir Processing /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info writing /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-dzv903wv/snakemake-8.18.2.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: snakemake Building wheel for snakemake (pyproject.toml): started Running command Building wheel for snakemake (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/api.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/cli.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/ioflags.py -> build/lib/snakemake copying snakemake/ioutils.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/profiles.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/spawn_jobs.py -> build/lib/snakemake copying snakemake/storage.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake creating build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/storage.py -> build/lib/snakemake/caching creating build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common copying snakemake/common/argparse.py -> build/lib/snakemake/common copying snakemake/common/configfile.py -> build/lib/snakemake/common copying snakemake/common/git.py -> build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/typing.py -> build/lib/snakemake/common copying snakemake/common/workdir_handler.py -> build/lib/snakemake/common creating build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment creating build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors copying snakemake/executors/dryrun.py -> build/lib/snakemake/executors copying snakemake/executors/local.py -> build/lib/snakemake/executors copying snakemake/executors/touch.py -> build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors creating build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting creating build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote creating build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report copying snakemake/report/common.py -> build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report creating build/lib/snakemake/script copying snakemake/script/__init__.py -> build/lib/snakemake/script creating build/lib/snakemake/settings copying snakemake/settings/__init__.py -> build/lib/snakemake/settings copying snakemake/settings/enums.py -> build/lib/snakemake/settings copying snakemake/settings/types.py -> build/lib/snakemake/settings creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/common/tests copying snakemake/common/tests/__init__.py -> build/lib/snakemake/common/tests creating build/lib/snakemake/common/tests/testcases copying snakemake/common/tests/testcases/__init__.py -> build/lib/snakemake/common/tests/testcases creating build/lib/snakemake/common/tests/testcases/groups copying snakemake/common/tests/testcases/groups/__init__.py -> build/lib/snakemake/common/tests/testcases/groups creating build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/simple/__init__.py -> build/lib/snakemake/common/tests/testcases/simple creating build/lib/snakemake/report/html_reporter copying snakemake/report/html_reporter/__init__.py -> build/lib/snakemake/report/html_reporter copying snakemake/report/html_reporter/common.py -> build/lib/snakemake/report/html_reporter creating build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/__init__.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/categories.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/common.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/configfiles.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/packages.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/results.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/rulegraph.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/rules.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/runtimes.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/timeline.py -> build/lib/snakemake/report/html_reporter/data creating build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/__init__.py -> build/lib/snakemake/report/html_reporter/template creating build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/__init__.py -> build/lib/snakemake/report/html_reporter/template/components creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/common/tests/testcases/groups/Snakefile -> build/lib/snakemake/common/tests/testcases/groups copying snakemake/common/tests/testcases/simple/Snakefile -> build/lib/snakemake/common/tests/testcases/simple copying snakemake/report/html_reporter/template/style.css -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/index.html.jinja2 -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/logo.svg -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/components/abstract_menu.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/abstract_results.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/app.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/button.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/category.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/common.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/content.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/icon.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/list_heading.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/list_item.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/menu.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/navbar.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/report_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/result_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/result_view_button.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/rule_graph.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/rule_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/search_results.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/stats.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/subcategory.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '8.18.2' installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/__main__.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/api.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/cli.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/exceptions.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/io.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ioflags.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ioutils.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/profiles.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/spawn_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/storage.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/wrapper.py -> build/bdist.linux-x86_64/wheel/snakemake creating build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/storage.py -> build/bdist.linux-x86_64/wheel/snakemake/caching creating build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/argparse.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/configfile.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/git.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/typing.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/workdir_handler.py -> build/bdist.linux-x86_64/wheel/snakemake/common creating build/bdist.linux-x86_64/wheel/snakemake/common/tests copying build/lib/snakemake/common/tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases copying build/lib/snakemake/common/tests/testcases/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/Snakefile -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/Snakefile -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple creating build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment creating build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/dryrun.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/local.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/touch.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-x86_64/wheel/snakemake/executors creating build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-x86_64/wheel/snakemake/linting creating build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-x86_64/wheel/snakemake/remote creating build/bdist.linux-x86_64/wheel/snakemake/report copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report copying build/lib/snakemake/report/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-x86_64/wheel/snakemake/report creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter copying build/lib/snakemake/report/html_reporter/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter copying build/lib/snakemake/report/html_reporter/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/categories.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/configfiles.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/packages.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/results.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/rulegraph.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/runtimes.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/timeline.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/app.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/category.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/common.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/content.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/icon.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/list_heading.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/list_item.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/navbar.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/report_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/result_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/result_view_button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/rule_graph.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/rule_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/search_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/stats.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/subcategory.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/style.css -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/index.html.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/logo.svg -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template creating build/bdist.linux-x86_64/wheel/snakemake/script copying build/lib/snakemake/script/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/script creating build/bdist.linux-x86_64/wheel/snakemake/settings copying build/lib/snakemake/settings/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/settings copying build/lib/snakemake/settings/enums.py -> build/bdist.linux-x86_64/wheel/snakemake/settings copying build/lib/snakemake/settings/types.py -> build/bdist.linux-x86_64/wheel/snakemake/settings creating build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/report.css -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/gui.html -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/_version.py -> build/bdist.linux-x86_64/wheel/snakemake running install_egg_info running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to build/bdist.linux-x86_64/wheel/snakemake-8.18.2-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/snakemake-8.18.2.dist-info/WHEEL creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-wheel-vs6_vnmx/.tmp-r7srp4gq/snakemake-8.18.2-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/api.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cli.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.html' adding 'snakemake/gui.py' adding 'snakemake/io.py' adding 'snakemake/ioflags.py' adding 'snakemake/ioutils.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/profiles.py' adding 'snakemake/report.css' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/spawn_jobs.py' adding 'snakemake/storage.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/storage.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/argparse.py' adding 'snakemake/common/configfile.py' adding 'snakemake/common/git.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/common/typing.py' adding 'snakemake/common/workdir_handler.py' adding 'snakemake/common/tests/__init__.py' adding 'snakemake/common/tests/testcases/__init__.py' adding 'snakemake/common/tests/testcases/groups/Snakefile' adding 'snakemake/common/tests/testcases/groups/__init__.py' adding 'snakemake/common/tests/testcases/simple/Snakefile' adding 'snakemake/common/tests/testcases/simple/__init__.py' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/dryrun.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/jobscript.sh' adding 'snakemake/executors/local.py' adding 'snakemake/executors/touch.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/common.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/html_reporter/__init__.py' adding 'snakemake/report/html_reporter/common.py' adding 'snakemake/report/html_reporter/data/__init__.py' adding 'snakemake/report/html_reporter/data/categories.py' adding 'snakemake/report/html_reporter/data/common.py' adding 'snakemake/report/html_reporter/data/configfiles.py' adding 'snakemake/report/html_reporter/data/packages.py' adding 'snakemake/report/html_reporter/data/results.py' adding 'snakemake/report/html_reporter/data/rulegraph.py' adding 'snakemake/report/html_reporter/data/rules.py' adding 'snakemake/report/html_reporter/data/runtimes.py' adding 'snakemake/report/html_reporter/data/timeline.py' adding 'snakemake/report/html_reporter/template/__init__.py' adding 'snakemake/report/html_reporter/template/index.html.jinja2' adding 'snakemake/report/html_reporter/template/logo.svg' adding 'snakemake/report/html_reporter/template/style.css' adding 'snakemake/report/html_reporter/template/components/__init__.py' adding 'snakemake/report/html_reporter/template/components/abstract_menu.js' adding 'snakemake/report/html_reporter/template/components/abstract_results.js' adding 'snakemake/report/html_reporter/template/components/app.js' adding 'snakemake/report/html_reporter/template/components/breadcrumbs.js' adding 'snakemake/report/html_reporter/template/components/button.js' adding 'snakemake/report/html_reporter/template/components/category.js' adding 'snakemake/report/html_reporter/template/components/common.js' adding 'snakemake/report/html_reporter/template/components/content.js' adding 'snakemake/report/html_reporter/template/components/icon.js' adding 'snakemake/report/html_reporter/template/components/list_heading.js' adding 'snakemake/report/html_reporter/template/components/list_item.js' adding 'snakemake/report/html_reporter/template/components/menu.js' adding 'snakemake/report/html_reporter/template/components/navbar.js' adding 'snakemake/report/html_reporter/template/components/report_info.js' adding 'snakemake/report/html_reporter/template/components/result_info.js' adding 'snakemake/report/html_reporter/template/components/result_view_button.js' adding 'snakemake/report/html_reporter/template/components/rule_graph.js' adding 'snakemake/report/html_reporter/template/components/rule_info.js' adding 'snakemake/report/html_reporter/template/components/search_results.js' adding 'snakemake/report/html_reporter/template/components/stats.js' adding 'snakemake/report/html_reporter/template/components/subcategory.js' adding 'snakemake/script/__init__.py' adding 'snakemake/settings/__init__.py' adding 'snakemake/settings/enums.py' adding 'snakemake/settings/types.py' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-8.18.2.dist-info/LICENSE.md' adding 'snakemake-8.18.2.dist-info/METADATA' adding 'snakemake-8.18.2.dist-info/WHEEL' adding 'snakemake-8.18.2.dist-info/entry_points.txt' adding 'snakemake-8.18.2.dist-info/top_level.txt' adding 'snakemake-8.18.2.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for snakemake (pyproject.toml): finished with status 'done' Created wheel for snakemake: filename=snakemake-8.18.2-py3-none-any.whl size=307215 sha256=e7928577a93bbff5a75f75ed340e2ce0260eeb12d89bc27dd363cb1133554b3d Stored in directory: /builddir/.cache/pip/wheels/b4/a9/cd/2536f65abc896962a23d47538f30fe428d1ceaa067828ea33b Successfully built snakemake + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.9O26nQ + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + '[' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build + mkdir /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 ++ ls /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir/snakemake-8.18.2-py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=snakemake==8.18.2 + '[' -z snakemake==8.18.2 ']' + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir snakemake==8.18.2 Using pip 24.2 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir Processing ./pyproject-wheeldir/snakemake-8.18.2-py3-none-any.whl Installing collected packages: snakemake Creating /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin changing mode of /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake to 755 Successfully installed snakemake-8.18.2 + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake: updating + rm -rfv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --record /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD removed '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD' + rm -fv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/REQUESTED removed '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-files --output-modules /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-record --prefix /usr -l snakemake + install -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/man/man1 + PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + help2man --no-info '--name=Metapackage for snakemake: messaging extras' snakemake + install -t /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc + install -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles + cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles 'misc/vim/README.md' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/README.md' 'misc/vim/ftdetect' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect' 'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect/snakemake.vim' 'misc/vim/ftplugin' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin' 'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake' 'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim' 'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim' 'misc/vim/syntax' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/syntax' 'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/syntax/snakemake.vim' + find /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/README.md + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/storage.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/groups/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/simple/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents 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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/containerize.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/env_modules.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/singularity.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/singularity.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/dryrun.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/google_lifesciences_helper.cpython-313.pyc: rewriting with normalized contents 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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/path_modifier.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/path_modifier.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/persistence.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/parser.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/resources.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ruleinfo.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/persistence.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/shell.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/shell.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/scheduler.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/target_jobs.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/storage.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.opt-1.pyc: replacing with normalized version Scanned 59 directories and 368 files, processed 130 inodes, 129 modified (42 replaced + 87 rewritten), 0 unsupported format, 0 errors Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.Fb7rGw + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 + '[' '!' -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + _PYTHONSITE=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.x86_64-pyproject-modules -e '*.tests*' -e snakemake.executors.flux Check import: snakemake Check import: snakemake.api Check import: snakemake.benchmark Check import: snakemake.caching Check import: snakemake.caching.hash Check import: snakemake.caching.local Check import: snakemake.caching.storage Check import: snakemake.checkpoints Check import: snakemake.cli Check import: snakemake.common Check import: snakemake.common.argparse Check import: snakemake.common.configfile Check import: snakemake.common.git Check import: snakemake.common.tbdstring Check import: snakemake.common.typing Check import: snakemake.common.workdir_handler Check import: snakemake.cwl Check import: snakemake.dag Check import: snakemake.decorators Check import: snakemake.deployment Check import: snakemake.deployment.conda Check import: snakemake.deployment.containerize Check import: snakemake.deployment.env_modules Check import: snakemake.deployment.singularity Check import: snakemake.exceptions Check import: snakemake.executors Check import: snakemake.executors.dryrun Check import: snakemake.executors.google_lifesciences_helper Check import: snakemake.executors.local Check import: snakemake.executors.touch Check import: snakemake.gui Check import: snakemake.io Check import: snakemake.ioflags Check import: snakemake.ioutils Check import: snakemake.jobs Check import: snakemake.linting Check import: snakemake.linting.links Check import: snakemake.linting.rules Check import: snakemake.linting.snakefiles Check import: snakemake.logging Check import: snakemake.modules Check import: snakemake.notebook Check import: snakemake.output_index Check import: snakemake.parser Check import: snakemake.path_modifier Check import: snakemake.persistence Check import: snakemake.profiles Check import: snakemake.remote Check import: snakemake.remote.AzBlob Check import: snakemake.remote.EGA Check import: snakemake.remote.FTP Check import: snakemake.remote.GS Check import: snakemake.remote.HTTP Check import: snakemake.remote.NCBI Check import: snakemake.remote.S3 Check import: snakemake.remote.S3Mocked Check import: snakemake.remote.SFTP Check import: snakemake.remote.XRootD Check import: snakemake.remote.dropbox Check import: snakemake.remote.gfal Check import: snakemake.remote.gridftp Check import: snakemake.remote.iRODS Check import: snakemake.remote.webdav Check import: snakemake.remote.zenodo Check import: snakemake.report Check import: snakemake.report.common Check import: snakemake.report.html_reporter Check import: snakemake.report.html_reporter.common Check import: snakemake.report.html_reporter.data Check import: snakemake.report.html_reporter.data.categories Check import: snakemake.report.html_reporter.data.common Check import: snakemake.report.html_reporter.data.configfiles Check import: snakemake.report.html_reporter.data.packages Check import: snakemake.report.html_reporter.data.results Check import: snakemake.report.html_reporter.data.rulegraph Check import: snakemake.report.html_reporter.data.rules Check import: snakemake.report.html_reporter.data.runtimes Check import: snakemake.report.html_reporter.data.timeline Check import: snakemake.report.html_reporter.template Check import: snakemake.report.html_reporter.template.components Check import: snakemake.report.rulegraph_spec Check import: snakemake.resources Check import: snakemake.ruleinfo Check import: snakemake.rules Check import: snakemake.scheduler Check import: snakemake.script Check import: snakemake.settings Check import: snakemake.settings.enums Check import: snakemake.settings.types Check import: snakemake.shell Check import: snakemake.sourcecache Check import: snakemake.spawn_jobs Check import: snakemake.storage Check import: snakemake.target_jobs Check import: snakemake.template_rendering Check import: snakemake.template_rendering.jinja2 Check import: snakemake.template_rendering.yte Check import: snakemake.unit_tests Check import: snakemake.unit_tests.templates Check import: snakemake.utils Check import: snakemake.workflow Check import: snakemake.wrapper + k='not test_ancient' + k='not test_ancient and not test_containerized' + k='not test_ancient and not test_containerized and not test_default_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda and not test_group_job_resources_with_pipe' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=2 + /usr/bin/pytest -v -k 'not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda and not test_group_job_resources_with_pipe' tests/tests.py tests/test_expand.py tests/test_io.py tests/test_schema.py tests/test_linting.py tests/test_executor_test_suite.py ============================= test session starts ============================== platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2 configfile: pyproject.toml plugins: mock-3.14.0 collecting ... collected 343 items / 60 deselected / 283 selected tests/tests.py::test_list_untracked PASSED [ 0%] tests/tests.py::test_delete_all_output PASSED [ 0%] tests/tests.py::test_github_issue_14 PASSED [ 1%] tests/tests.py::test_issue956 PASSED [ 1%] tests/tests.py::test01 PASSED [ 1%] tests/tests.py::test02 PASSED [ 2%] tests/tests.py::test03 PASSED [ 2%] tests/tests.py::test04 PASSED [ 2%] tests/tests.py::test05 PASSED [ 3%] tests/tests.py::test06 PASSED [ 3%] tests/tests.py::test07 PASSED [ 3%] tests/tests.py::test08 PASSED [ 4%] tests/tests.py::test09 PASSED [ 4%] tests/tests.py::test10 PASSED [ 4%] tests/tests.py::test11 PASSED [ 5%] tests/tests.py::test12 PASSED [ 5%] tests/tests.py::test13 PASSED [ 6%] tests/tests.py::test15 PASSED [ 6%] tests/tests.py::test_set_threads PASSED [ 6%] tests/tests.py::test_glpk_solver PASSED [ 7%] tests/tests.py::test_coin_solver PASSED [ 7%] tests/tests.py::test_directory PASSED [ 7%] tests/tests.py::test_directory2 PASSED [ 8%] tests/tests.py::test_set_resources_complex_profile PASSED [ 8%] tests/tests.py::test_set_resources_complex_cli PASSED [ 8%] tests/tests.py::test_params PASSED [ 9%] tests/tests.py::test_same_wildcard PASSED [ 9%] tests/tests.py::test_conditional PASSED [ 9%] tests/tests.py::test_unpack_dict PASSED [ 10%] tests/tests.py::test_unpack_list PASSED [ 10%] tests/tests.py::test_shell PASSED [ 10%] tests/tests.py::test_temp PASSED [ 11%] tests/tests.py::test_keyword_list PASSED [ 11%] tests/tests.py::test_globwildcards PASSED [ 12%] tests/tests.py::test_ioutils PASSED [ 12%] tests/tests.py::test_local_import PASSED [ 12%] tests/tests.py::test_ruledeps PASSED [ 13%] tests/tests.py::test_url_include SKIPPED (no internet connection) [ 13%] tests/tests.py::test_touch PASSED [ 13%] tests/tests.py::test_touch_flag_with_directories PASSED [ 14%] tests/tests.py::test_config PASSED [ 14%] tests/tests.py::test_update_config PASSED [ 14%] tests/tests.py::test_config_merging PASSED [ 15%] tests/tests.py::test_wildcard_keyword PASSED [ 15%] tests/tests.py::test_benchmark PASSED [ 15%] tests/tests.py::test_benchmark_jsonl PASSED [ 16%] tests/tests.py::test_temp_expand PASSED [ 16%] tests/tests.py::test_wildcard_count_ambiguity PASSED [ 16%] tests/tests.py::test_multiple_includes PASSED [ 17%] tests/tests.py::test_name_override PASSED [ 17%] tests/tests.py::test_yaml_config PASSED [ 18%] tests/tests.py::test_symlink_temp SKIPPED (This does not work reliab...) [ 18%] tests/tests.py::test_empty_include PASSED [ 18%] tests/tests.py::test_shadow PASSED [ 19%] tests/tests.py::test_shadow_copy PASSED [ 19%] tests/tests.py::test_shadow_prefix PASSED [ 19%] tests/tests.py::test_shadowed_log PASSED [ 20%] tests/tests.py::test_until PASSED [ 20%] tests/tests.py::test_omitfrom PASSED [ 20%] tests/tests.py::test_nonstr_params PASSED [ 21%] tests/tests.py::test_delete_output PASSED [ 21%] tests/tests.py::test_input_generator PASSED [ 21%] tests/tests.py::test_symlink_time_handling PASSED [ 22%] tests/tests.py::test_protected_symlink_output PASSED [ 22%] tests/tests.py::test_get_log_none PASSED [ 22%] tests/tests.py::test_get_log_both PASSED [ 23%] tests/tests.py::test_get_log_stderr PASSED [ 23%] tests/tests.py::test_get_log_stdout PASSED [ 24%] tests/tests.py::test_get_log_complex PASSED [ 24%] tests/tests.py::test_spaces_in_fnames PASSED [ 24%] tests/tests.py::test_deferred_func_eval PASSED [ 25%] tests/tests.py::test_format_params PASSED [ 25%] tests/tests.py::test_rule_defined_in_for_loop PASSED [ 25%] tests/tests.py::test_issue381 PASSED [ 26%] tests/tests.py::test_format_wildcards PASSED [ 26%] tests/tests.py::test_with_parentheses PASSED [ 26%] tests/tests.py::test_dup_out_patterns PASSED [ 27%] tests/tests.py::test_issue2826_failed_binary_logs PASSED [ 27%] tests/tests.py::test_threads PASSED [ 27%] tests/tests.py::test_threads0 PASSED [ 28%] tests/tests.py::test_run_namedlist PASSED [ 28%] tests/tests.py::test_profile PASSED [ 28%] tests/tests.py::test_singularity SKIPPED (no internet connection) [ 29%] tests/tests.py::test_singularity_cluster SKIPPED (no internet connec...) [ 29%] tests/tests.py::test_singularity_invalid PASSED [ 30%] tests/tests.py::test_singularity_module_invalid PASSED [ 30%] tests/tests.py::test_singularity_none SKIPPED (no internet connection) [ 30%] tests/tests.py::test_singularity_global SKIPPED (no internet connection) [ 31%] tests/tests.py::test_issue612 PASSED [ 31%] tests/tests.py::test_bash PASSED [ 31%] tests/tests.py::test_inoutput_is_path PASSED [ 32%] tests/tests.py::test_log_input PASSED [ 32%] tests/tests.py::test_issue805 PASSED [ 32%] tests/tests.py::test_issue823_1 PASSED [ 33%] tests/tests.py::test_issue823_2 PASSED [ 33%] tests/tests.py::test_issue823_3 PASSED [ 33%] tests/tests.py::test_pathlib PASSED [ 34%] tests/tests.py::test_pathlib_missing_file PASSED [ 34%] tests/tests.py::test_group_jobs PASSED [ 34%] tests/tests.py::test_group_jobs_attempts PASSED [ 35%] tests/tests.py::test_groups_out_of_jobs PASSED [ 35%] tests/tests.py::test_group_jobs_resources PASSED [ 36%] tests/tests.py::test_group_jobs_resources_with_max_threads PASSED [ 36%] tests/tests.py::test_group_jobs_resources_with_limited_resources PASSED [ 36%] tests/tests.py::test_global_resource_limits_limit_scheduling_of_groups PASSED [ 37%] tests/tests.py::test_new_resources_can_be_defined_as_local PASSED [ 37%] tests/tests.py::test_resources_can_be_overwritten_as_global PASSED [ 37%] tests/tests.py::test_scopes_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_resources_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_excluded_resources_not_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_multicomp_group_jobs PASSED [ 39%] tests/tests.py::test_group_job_fail PASSED [ 39%] tests/tests.py::test_pipes_simple PASSED [ 39%] tests/tests.py::test_pipes_multiple PASSED [ 40%] tests/tests.py::test_pipes_fail PASSED [ 40%] tests/tests.py::test_validate PASSED [ 40%] tests/tests.py::test_validate_fail PASSED [ 41%] tests/tests.py::test_issue854 PASSED [ 41%] tests/tests.py::test_issue850 PASSED [ 42%] tests/tests.py::test_issue860 PASSED [ 42%] tests/tests.py::test_issue894 PASSED [ 42%] tests/tests.py::test_issue584 PASSED [ 43%] tests/tests.py::test_issue912 PASSED [ 43%] tests/tests.py::test_job_properties PASSED [ 43%] tests/tests.py::test_issue916 PASSED [ 44%] tests/tests.py::test_issue930 PASSED [ 44%] tests/tests.py::test_convert_to_cwl SKIPPED (Temporarily disable unt...) [ 44%] tests/tests.py::test_issue1037 PASSED [ 45%] tests/tests.py::test_issue1046 PASSED [ 45%] tests/tests.py::test_checkpoints PASSED [ 45%] tests/tests.py::test_checkpoints_dir PASSED [ 46%] tests/tests.py::test_issue1092 PASSED [ 46%] tests/tests.py::test_issue958 PASSED [ 46%] tests/tests.py::test_issue471 PASSED [ 47%] tests/tests.py::test_issue1085 PASSED [ 47%] tests/tests.py::test_pipes2 PASSED [ 48%] tests/tests.py::test_expand_flag PASSED [ 48%] tests/tests.py::test_default_resources PASSED [ 48%] tests/tests.py::test_tmpdir PASSED [ 49%] tests/tests.py::test_tmpdir_default PASSED [ 49%] tests/tests.py::test_issue1284 PASSED [ 49%] tests/tests.py::test_issue1281 PASSED [ 50%] tests/tests.py::test_filegraph PASSED [ 50%] tests/tests.py::test_batch PASSED [ 50%] tests/tests.py::test_batch_final PASSED [ 51%] tests/tests.py::test_batch_fail PASSED [ 51%] tests/tests.py::test_github_issue52 PASSED [ 51%] tests/tests.py::test_envvars PASSED [ 52%] tests/tests.py::test_github_issue105 PASSED [ 52%] tests/tests.py::test_github_issue413 PASSED [ 53%] tests/tests.py::test_github_issue627 PASSED [ 53%] tests/tests.py::test_github_issue727 PASSED [ 53%] tests/tests.py::test_github_issue988 PASSED [ 54%] tests/tests.py::test_github_issue1062 SKIPPED (ftp connections curre...) [ 54%] tests/tests.py::test_output_file_cache PASSED [ 54%] tests/tests.py::test_multiext PASSED [ 55%] tests/tests.py::test_core_dependent_threads PASSED [ 55%] tests/tests.py::test_env_modules PASSED [ 55%] tests/tests.py::test_container SKIPPED (no internet connection) [ 56%] tests/tests.py::test_string_resources PASSED [ 56%] tests/tests.py::test_github_issue456 PASSED [ 56%] tests/tests.py::test_scatter_gather PASSED [ 57%] tests/tests.py::test_parsing_terminal_comment_following_statement PASSED [ 57%] tests/tests.py::test_github_issue640 PASSED [ 57%] tests/tests.py::test_generate_unit_tests PASSED [ 58%] tests/tests.py::test_paramspace PASSED [ 58%] tests/tests.py::test_paramspace_single_wildcard PASSED [ 59%] tests/tests.py::test_github_issue806 PASSED [ 59%] tests/tests.py::test_containerize PASSED [ 59%] tests/tests.py::test_long_shell PASSED [ 60%] tests/tests.py::test_modules_all PASSED [ 60%] tests/tests.py::test_module_nested PASSED [ 60%] tests/tests.py::test_modules_all_exclude_1 PASSED [ 61%] tests/tests.py::test_modules_all_exclude_2 PASSED [ 61%] tests/tests.py::test_modules_specific PASSED [ 61%] tests/tests.py::test_use_rule_same_module PASSED [ 62%] tests/tests.py::test_module_no_prefixing_modified_paths PASSED [ 62%] tests/tests.py::test_module_worfklow_namespacing PASSED [ 62%] tests/tests.py::test_handover PASSED [ 63%] tests/tests.py::test_source_path PASSED [ 63%] tests/tests.py::test_filesep_windows_targets SKIPPED (Windows stuff) [ 63%] tests/tests.py::test_filesep_on_windows SKIPPED (Windows stuff) [ 64%] tests/tests.py::test_set_resources PASSED [ 64%] tests/tests.py::test_github_issue1069 PASSED [ 65%] tests/tests.py::test_max_jobs_per_timespan PASSED [ 65%] tests/tests.py::test_touch_pipeline_with_temp_dir PASSED [ 65%] tests/tests.py::test_all_temp PASSED [ 66%] tests/tests.py::test_github_issue1158 PASSED [ 66%] tests/tests.py::test_checkpoint_allowed_rules PASSED [ 66%] tests/tests.py::test_modules_ruledeps_inheritance PASSED [ 67%] tests/tests.py::test_issue1331 PASSED [ 67%] tests/tests.py::test_default_target PASSED [ 67%] tests/tests.py::test_cache_multioutput PASSED [ 68%] tests/tests.py::test_github_issue1384 PASSED [ 68%] tests/tests.py::test_template_engine PASSED [ 68%] tests/tests.py::test_groupid_expand_local PASSED [ 69%] tests/tests.py::test_groupid_expand_cluster PASSED [ 69%] tests/tests.py::test_service_jobs PASSED [ 69%] tests/tests.py::test_incomplete_params PASSED [ 70%] tests/tests.py::test_github_issue261 PASSED [ 70%] tests/tests.py::test_pipe_depend PASSED [ 71%] tests/tests.py::test_pipe_depend_target_file PASSED [ 71%] tests/tests.py::test_github_issue1500 PASSED [ 71%] tests/tests.py::test_github_issue1542 PASSED [ 72%] tests/tests.py::test_github_issue1550 PASSED [ 72%] tests/tests.py::test_github_issue1498 PASSED [ 72%] tests/tests.py::test_lazy_resources PASSED [ 73%] tests/tests.py::test_cleanup_metadata_fail PASSED [ 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[ 86%] tests/tests.py::test_handle_storage_multi_consumers PASSED [ 86%] tests/tests.py::test_github_issue2732 PASSED [ 87%] tests/tests.py::test_expand_list_of_functions PASSED [ 87%] tests/tests.py::test_scheduler_sequential_all_cores PASSED [ 87%] tests/tests.py::test_checkpoint_open PASSED [ 88%] tests/test_expand.py::test_simple_expand PASSED [ 88%] tests/test_expand.py::test_allow_missing PASSED [ 89%] tests/test_io.py::test_wildcard_regex PASSED [ 89%] tests/test_io.py::test_expand PASSED [ 89%] tests/test_schema.py::test_config PASSED [ 90%] tests/test_schema.py::test_config_ref PASSED [ 90%] tests/test_schema.py::test_dataframe PASSED [ 90%] tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 91%] tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 91%] tests/test_linting.py::test_lint[envvars-positive] PASSED [ 91%] tests/test_linting.py::test_lint[envvars-negative] PASSED [ 92%] tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 92%] tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 92%] tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 93%] tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 93%] tests/test_linting.py::test_lint[long_run-positive] PASSED [ 93%] tests/test_linting.py::test_lint[long_run-negative] PASSED [ 94%] tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 94%] tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 95%] tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 95%] tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 95%] tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 96%] tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 96%] tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 96%] tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 97%] tests/test_linting.py::test_lint[path_add-positive] PASSED [ 97%] tests/test_linting.py::test_lint[path_add-negative] PASSED [ 97%] tests/test_linting.py::test_lint[singularity-positive] PASSED [ 98%] tests/test_linting.py::test_lint[singularity-negative] PASSED [ 98%] tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 98%] tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 99%] tests/test_executor_test_suite.py::TestWorkflows::test_simple_workflow PASSED [ 99%] tests/test_executor_test_suite.py::TestWorkflows::test_group_workflow PASSED [100%] =============================== warnings summary =============================== tests/tests.py::test_list_untracked :488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/tests.py::test_list_untracked :488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/tests.py::test_list_untracked /usr/lib64/python3.13/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). _EPOCH_DATETIME = datetime.utcfromtimestamp(0) tests/tests.py: 4 warnings tests/test_schema.py: 12 warnings /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake/utils.py:52: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need. from jsonschema import validators, RefResolver -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html === 272 passed, 11 skipped, 60 deselected, 19 warnings in 431.02s (0:07:11) ==== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: snakemake-8.18.2-4.fc42.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.6DAFmF + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + DOCDIR=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/CHANGELOG.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README-nano.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README-vim.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + RPM_EC=0 ++ jobs -p + exit 0 Provides: python3.13dist(snakemake) = 8.18.2 python3dist(snakemake) = 8.18.2 snakemake = 8.18.2-4.fc42 vim-snakemake = 8.18.2-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.13dist(conda-inject) < 2~~ with python3.13dist(conda-inject) >= 1.3.1) (python3.13dist(dpath) < 3~~ with python3.13dist(dpath) >= 2.1.6) (python3.13dist(jinja2) < 4~~ with python3.13dist(jinja2) >= 3) (python3.13dist(pulp) < 2.10~~ with python3.13dist(pulp) >= 2.3.1) (python3.13dist(requests) < 3~~ with python3.13dist(requests) >= 2.8.1) (python3.13dist(smart-open) < 8~~ with python3.13dist(smart-open) >= 4) (python3.13dist(snakemake-interface-common) < 2~~ with python3.13dist(snakemake-interface-common) >= 1.17) (python3.13dist(snakemake-interface-executor-plugins) < 10~~ with python3.13dist(snakemake-interface-executor-plugins) >= 9.2) (python3.13dist(snakemake-interface-report-plugins) < 2~~ with python3.13dist(snakemake-interface-report-plugins) >= 1) (python3.13dist(snakemake-interface-storage-plugins) < 4~~ with python3.13dist(snakemake-interface-storage-plugins) >= 3.2.3) (python3.13dist(toposort) < 2~~ with python3.13dist(toposort) >= 1.10) (python3.13dist(yte) < 2~~ with python3.13dist(yte) >= 1.5.1) /usr/bin/python3 python(abi) = 3.13 python3.13dist(appdirs) python3.13dist(configargparse) python3.13dist(connection-pool) >= 0.0.3 python3.13dist(datrie) python3.13dist(docutils) python3.13dist(gitpython) python3.13dist(humanfriendly) python3.13dist(immutables) python3.13dist(jsonschema) python3.13dist(nbformat) python3.13dist(packaging) python3.13dist(psutil) python3.13dist(pyyaml) python3.13dist(reretry) python3.13dist(stopit) python3.13dist(tabulate) python3.13dist(throttler) python3.13dist(wrapt) Obsoletes: snakemake+azure < 8.1.0-1 snakemake+google-cloud < 8.1.0-1 snakemake-doc < 8.2.1-2 Processing files: snakemake+reports-8.18.2-4.fc42.noarch Provides: python3.13dist(snakemake[reports]) = 8.18.2 python3dist(snakemake[reports]) = 8.18.2 snakemake+reports = 8.18.2-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.13 python3.13dist(pygments) Processing files: snakemake+messaging-8.18.2-4.fc42.noarch Provides: python3.13dist(snakemake[messaging]) = 8.18.2 python3dist(snakemake[messaging]) = 8.18.2 snakemake+messaging = 8.18.2-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.13 python3.13dist(slack-sdk) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.src.rpm Wrote: /builddir/build/RPMS/snakemake+reports-8.18.2-4.fc42.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+messaging-8.18.2-4.fc42.noarch.rpm Wrote: /builddir/build/RPMS/snakemake-8.18.2-4.fc42.noarch.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.mtxnO6 + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + test -d /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/snakemake-8.18.2-build + rm -rf /builddir/build/BUILD/snakemake-8.18.2-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild snakemake-8.18.2-4.fc42.src.rpm Finish: build phase for snakemake-8.18.2-4.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1728851948.091321/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-8.18.2-4.fc42.src.rpm) Config(child) 7 minutes 48 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "snakemake+messaging", "epoch": null, "version": "8.18.2", "release": "4.fc42", "arch": "noarch" }, { "name": "snakemake+reports", "epoch": null, "version": "8.18.2", "release": "4.fc42", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "8.18.2", "release": "4.fc42", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "8.18.2", "release": "4.fc42", "arch": "src" } ] } RPMResults finished