## START: Set by rpmautospec ## (rpmautospec version 0.3.5) ## RPMAUTOSPEC: autorelease, autochangelog %define autorelease(e:s:pb:n) %{?-p:0.}%{lua: release_number = 16; base_release_number = tonumber(rpm.expand("%{?-b*}%{!?-b:1}")); print(release_number + base_release_number - 1); }%{?-e:.%{-e*}}%{?-s:.%{-s*}}%{!?-n:%{?dist}} ## END: Set by rpmautospec %global _description %{expand: NeuroM is a Python-based toolkit for the analysis and processing of neuron morphologies. Documentation is available at https://neurom.readthedocs.io/ } %global forgeurl https://github.com/BlueBrain/NeuroM Name: python-neurom Version: 3.2.2 Release: %autorelease Summary: Neuronal Morphology Analysis Tool %global tag v%{version} %forgemeta License: BSD-3-Clause URL: %forgeurl Source: %forgesource # Broken call to Rectangle constructor # https://github.com/BlueBrain/NeuroM/issues/1079 # # Fixed by: # # Remove py37, add py311, and fix Rectangle kwarg error # https://github.com/BlueBrain/NeuroM/pull/1082 # # We patch in only the actual fix: # # Fix Rectangle kwarg # https://github.com/BlueBrain/NeuroM/pull/1082/commits/1655ab3b1c5f66db3a06431c48f44a8dc61164d8 Patch: %{url}/pull/1082/commits/1655ab3b1c5f66db3a06431c48f44a8dc61164d8.patch # Remove a few useless shebang lines # https://github.com/BlueBrain/NeuroM/pull/1083 Patch: %{url}/pull/1083.patch # Replace PyPI mock test dependency with unittest.mock # https://github.com/BlueBrain/NeuroM/pull/1084 Patch: %{url}/pull/1084.patch BuildArch: noarch %description %_description %package -n python3-neurom Summary: %{summary} BuildRequires: python3-devel %description -n python3-neurom %_description %pyproject_extras_subpkg -n python3-neurom plotly %package doc Summary: Documentation for %{name} %description doc %_description %prep %forgeautosetup -p1 %py3_shebang_fix examples/ # correct config files path # not sure why this was changed: https://github.com/BlueBrain/NeuroM/commit/dbc3bd069a6fbded6c4a64cc038adb37c0b06932 sed -i 's|graft neurom/config|graft neurom/apps/config|' MANIFEST.in %generate_buildrequires export SETUPTOOLS_SCM_PRETEND_VERSION=%{version} %pyproject_buildrequires -t -x plotly %build export SETUPTOOLS_SCM_PRETEND_VERSION=%{version} %pyproject_wheel %install export SETUPTOOLS_SCM_PRETEND_VERSION=%{version} %pyproject_install %pyproject_save_files neurom # Remove spurious installed files rm -rf $RPM_BUILD_ROOT/%{python3_sitelib}/tests/ %check export SETUPTOOLS_SCM_PRETEND_VERSION=%{version} # tests failing # reported upstream: https://github.com/BlueBrain/NeuroM/issues/983 k="${k-}${k+ and }not test_extract_dataframe_multiproc" k="${k-}${k+ and }not test_extract_stats_scalar_feature" k="${k-}${k+ and }not test_markers" k="${k-}${k+ and }not test_single_neurite_no_soma" k="${k-}${k+ and }not test_skip_header" %tox -- -- -k "${k-}" %files -n python3-neurom -f %{pyproject_files} %doc AUTHORS.md %doc CHANGELOG.rst %doc README.md %{_bindir}/neurom %files doc %license LICENSE.txt %doc examples/ %doc tutorial/ %changelog * Fri Sep 15 2023 Benjamin A. Beasley - 3.2.2-16 - Update the list of test skips * Fri Sep 15 2023 Benjamin A. Beasley - 3.2.2-14 - Package the changelog as documentation * Fri Sep 15 2023 Benjamin A. Beasley - 3.2.2-12 - Replace python-mock test dependency with unittest.mock * Fri Sep 15 2023 Benjamin A. Beasley - 3.2.2-11 - Add a metapackage for the “plotly” extra * Fri Sep 15 2023 Benjamin A. Beasley - 3.2.2-10 - Better shebang line fixing - Send a PR upstream to remove useless shebangs; apply it as a patch - Use the py3_shebang_fix macro instead of sed to fix shebangs in examples * Fri Sep 15 2023 Benjamin A. Beasley - 3.2.2-9 - Patch matplotlib 3.8 incompatibility * Fri Sep 15 2023 Benjamin A. Beasley - 3.2.2-6 - Drop bogus BuildRequires on python3-toml * Fri Sep 15 2023 Benjamin A. Beasley - 3.2.2-5 - Update License to SPDX * Fri Jul 21 2023 Fedora Release Engineering - 3.2.2-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Wed Jul 12 2023 Python Maint - 3.2.2-3 - Rebuilt for Python 3.12 * Fri Jan 20 2023 Fedora Release Engineering - 3.2.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Sun Oct 09 2022 Ankur Sinha (Ankur Sinha Gmail) - 3.2.2-1 - feat: update to 3.2.2 (fixes rh#2082562) * Fri Jul 22 2022 Fedora Release Engineering - 3.1.0-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Wed Jun 15 2022 Python Maint - 3.1.0-4 - Rebuilt for Python 3.11 * Thu Mar 03 2022 Ankur Sinha (Ankur Sinha Gmail) - 3.1.0-3 - fix: patch manifest to include default config file * Thu Mar 03 2022 Ankur Sinha (Ankur Sinha Gmail) - 3.1.0-2 - fix: install config files dir * Sun Feb 20 2022 Ankur Sinha (Ankur Sinha Gmail) - 3.1.0-1 - feat: update to 3.1.0 (fixes rhbz#1952492) * Fri Jan 21 2022 Fedora Release Engineering - 1.8.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild * Fri Jul 23 2021 Fedora Release Engineering - 1.8.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild * Fri Jun 04 2021 Python Maint - 1.8.0-2 - Rebuilt for Python 3.10 * Wed Apr 14 2021 Ankur Sinha - 1.8.0-1 - Initial build