Warning: Permanently added '169.63.190.27' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6866242-fedora-rawhide-s390x --chroot fedora-rawhide-s390x Version: 0.70 PID: 9394 Logging PID: 9395 Task: {'appstream': False, 'background': True, 'build_id': 6866242, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': '10a9fbd1292724b11bb62d8f83b130912f28ed63', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/snakemake', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'snakemake', 'package_version': '7.32.4-3', 'project_dirname': 'scipy-1.8.3', 'project_name': 'scipy-1.8.3', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/scipy-1.8.3/fedora-rawhide-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/scipy-1.8.3--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '6866242-fedora-rawhide-s390x', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/snakemake /var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/snakemake', '/var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake'... Running: git checkout 10a9fbd1292724b11bb62d8f83b130912f28ed63 -- cmd: ['git', 'checkout', '10a9fbd1292724b11bb62d8f83b130912f28ed63', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake rc: 0 stdout: stderr: Note: switching to '10a9fbd1292724b11bb62d8f83b130912f28ed63'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 10a9fbd automatic import of snakemake Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading snakemake-7.32.4.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o snakemake-7.32.4.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/scipy-1.8.3/snakemake/snakemake-7.32.4.tar.gz/md5/2d7cd0faf40a8ca3c6e47f214536d1c9/snakemake-7.32.4.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 8677k 100 8677k 0 0 1688k 0 0:00:05 0:00:05 --:--:-- 2209k INFO: Reading stdout from command: md5sum snakemake-7.32.4.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1704460510.976858 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.4 starting (python version = 3.11.3, NVR = mock-5.4-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1704460510.976858 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake/snakemake.spec) Config(fedora-rawhide-s390x) Start: clean chroot Finish: clean chroot Mock Version: 5.4 INFO: Mock Version: 5.4 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1704460510.976858/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-s390x-bootstrap-1704460510.976858/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/3dab728da35e04eaf85278c9c6fe798210df1452efc2c9875d0c2c48d2d29efa/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/3dab728da35e04eaf85278c9c6fe798210df1452efc2c9875d0c2c48d2d29efa/merged) with podman image umount INFO: Using 'dnf' instead of 'dnf5' for bootstrap chroot INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf5 tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 164 kB/s | 1.7 MB 00:10 Additional repo http_kojipkgs_fedoraproject_org 219 MB/s | 66 MB 00:00 fedora 24 MB/s | 64 MB 00:02 Dependencies resolved. ========================================================================================================= Package Arch Version Repository Size ========================================================================================================= Installing: dnf5 s390x 5.1.10-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 521 k dnf5-plugins s390x 5.1.10-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 327 k Installing dependencies: fmt s390x 10.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 135 k libdnf5 s390x 5.1.10-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 926 k libdnf5-cli s390x 5.1.10-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 223 k sdbus-cpp s390x 1.4.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103 k Transaction Summary ========================================================================================================= Install 6 Packages Total download size: 2.2 M Installed size: 6.1 M Downloading Packages: (1/6): fmt-10.1.1-1.fc40.s390x.rpm 1.1 MB/s | 135 kB 00:00 (2/6): libdnf5-5.1.10-2.fc40.s390x.rpm 97 MB/s | 926 kB 00:00 (3/6): dnf5-plugins-5.1.10-2.fc40.s390x.rpm 2.4 MB/s | 327 kB 00:00 (4/6): sdbus-cpp-1.4.0-1.fc40.s390x.rpm 26 MB/s | 103 kB 00:00 (5/6): libdnf5-cli-5.1.10-2.fc40.s390x.rpm 27 MB/s | 223 kB 00:00 (6/6): dnf5-5.1.10-2.fc40.s390x.rpm 3.3 MB/s | 521 kB 00:00 -------------------------------------------------------------------------------- Total 14 MB/s | 2.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : fmt-10.1.1-1.fc40.s390x 1/6 Installing : libdnf5-5.1.10-2.fc40.s390x 2/6 Installing : libdnf5-cli-5.1.10-2.fc40.s390x 3/6 Installing : dnf5-5.1.10-2.fc40.s390x 4/6 Installing : sdbus-cpp-1.4.0-1.fc40.s390x 5/6 Installing : dnf5-plugins-5.1.10-2.fc40.s390x 6/6 Running scriptlet: dnf5-plugins-5.1.10-2.fc40.s390x 6/6 Installed: dnf5-5.1.10-2.fc40.s390x dnf5-plugins-5.1.10-2.fc40.s390x fmt-10.1.1-1.fc40.s390x libdnf5-5.1.10-2.fc40.s390x libdnf5-cli-5.1.10-2.fc40.s390x sdbus-cpp-1.4.0-1.fc40.s390x Complete! INFO: Switching package manager from dnf to the dnf5 (direct choice) Finish(bootstrap): installing dnf5 tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-1704460510.976858/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1-2.fc40.s390x rpm-sequoia-1.5.0-2.fc40.s390x python3-dnf-4.18.2-1.fc40.noarch yum-4.18.2-1.fc40.noarch dnf5-5.1.10-2.fc40.s390x dnf5-plugins-5.1.10-2.fc40.s390x Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 3.2 MiB/s | 18.6 MiB | 00m06s Copr repository 100% | 30.8 KiB/s | 331.8 KiB | 00m11s Additional repo http_kojipkgs_fedorapr 100% | 89.3 MiB/s | 16.0 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash s390x 5.2.21-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.3 MiB bzip2 s390x 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 99.2 KiB coreutils s390x 9.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.9 MiB cpio s390x 2.14-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB diffutils s390x 3.10-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB fedora-release-common noarch 40-0.26 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 19.0 KiB findutils s390x 1:4.9.0-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB gawk s390x 5.2.2-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB glibc-minimal-langpack s390x 2.38.9000-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B grep s390x 3.11-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB gzip s390x 1.12-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 383.7 KiB info s390x 7.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 405.1 KiB patch s390x 2.7.6-22.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 274.3 KiB redhat-rpm-config noarch 274-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 180.6 KiB rpm-build s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 180.2 KiB sed s390x 4.8-14.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 809.6 KiB shadow-utils s390x 2:4.14.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.0 MiB tar s390x 2:1.35-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB unzip s390x 6.0-62.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 414.1 KiB util-linux s390x 2.39.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.5 MiB which s390x 2.21-40.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83.9 KiB xz s390x 5.4.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB Installing dependencies: alternatives s390x 1.25-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 66.1 KiB ansible-srpm-macros noarch 1-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.5 KiB audit-libs s390x 3.1.2-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 318.8 KiB authselect s390x 1.4.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 156.3 KiB authselect-libs s390x 1.4.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 992.7 KiB basesystem noarch 11-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B binutils s390x 2.41-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26.1 MiB binutils-gold s390x 2.41-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB bzip2-libs s390x 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.5 KiB ca-certificates noarch 2023.2.62_v7.0.401-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB coreutils-common s390x 9.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.4 MiB cracklib s390x 2.9.11-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 250.0 KiB crypto-policies noarch 20231204-1.git1e3a2e4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 149.3 KiB curl s390x 8.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 826.2 KiB cyrus-sasl-lib s390x 2.1.28-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB debugedit s390x 5.0-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 202.5 KiB dwz s390x 0.15-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 314.6 KiB ed s390x 1.19-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.0 KiB efi-srpm-macros noarch 5-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.1 KiB elfutils s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB elfutils-debuginfod-client s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 64.4 KiB elfutils-default-yama-scope noarch 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 KiB elfutils-libelf s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB elfutils-libs s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 734.1 KiB fedora-gpg-keys noarch 40-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 123.2 KiB fedora-release noarch 40-0.26 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B fedora-release-identity-basic noarch 40-0.26 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 694.0 B fedora-repos noarch 40-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.9 KiB fedora-repos-rawhide noarch 40-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 KiB file s390x 5.45-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103.3 KiB file-libs s390x 5.45-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.9 MiB filesystem s390x 3.18-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106.0 B fonts-srpm-macros noarch 1:2.0.5-12.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 55.3 KiB forge-srpm-macros noarch 0.2.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.4 KiB fpc-srpm-macros noarch 1.3-8.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.0 B gdb-minimal s390x 14.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12.5 MiB gdbm s390x 1:1.23-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 483.9 KiB gdbm-libs s390x 1:1.23-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 133.4 KiB ghc-srpm-macros noarch 1.6.1-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 369.0 B glibc s390x 2.38.9000-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.3 MiB glibc-common s390x 2.38.9000-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB glibc-gconv-extra s390x 2.38.9000-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.7 MiB gmp s390x 1:6.2.1-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 765.1 KiB gnat-srpm-macros noarch 6-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 KiB go-srpm-macros noarch 3.3.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 60.6 KiB jansson s390x 2.13.1-7.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 92.1 KiB kernel-srpm-macros noarch 1.0-20.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB keyutils-libs s390x 1.6.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 54.2 KiB krb5-libs s390x 1.21.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB libacl s390x 2.3.1-11.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.8 KiB libarchive s390x 3.7.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB libattr s390x 2.5.1-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.3 KiB libblkid s390x 2.39.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 256.9 KiB libbrotli s390x 1.1.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 917.1 KiB libcap s390x 2.69-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 231.1 KiB libcap-ng s390x 0.8.4-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 76.7 KiB libcom_err s390x 1.47.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.0 KiB libcurl s390x 8.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 816.5 KiB libeconf s390x 0.5.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 55.8 KiB libevent s390x 2.1.12-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 938.7 KiB libfdisk s390x 2.39.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 390.9 KiB libffi s390x 3.4.4-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65.1 KiB libgcc s390x 13.2.1-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 173.2 KiB libgomp s390x 13.2.1-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 501.5 KiB libidn2 s390x 2.3.4-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 322.9 KiB libmount s390x 2.39.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 368.1 KiB libnghttp2 s390x 1.58.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 174.0 KiB libnsl2 s390x 2.0.0-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 61.7 KiB libpkgconf s390x 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 85.8 KiB libpsl s390x 0.21.2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 80.3 KiB libpwquality s390x 1.4.5-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 420.9 KiB libselinux s390x 3.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 188.9 KiB libsemanage s390x 3.6-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 301.3 KiB libsepol s390x 3.6-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 842.2 KiB libsigsegv s390x 2.14-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 49.0 KiB libsmartcols s390x 2.39.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 152.0 KiB libssh s390x 0.10.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 529.0 KiB libssh-config noarch 0.10.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 277.0 B libstdc++ s390x 13.2.1-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB libtasn1 s390x 4.19.0-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 187.5 KiB libtirpc s390x 1.3.4-1.rc1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 214.6 KiB libunistring s390x 1.1-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB libutempter s390x 1.2.1-10.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 57.3 KiB libuuid s390x 2.39.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.3 KiB libverto s390x 0.3.2-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 29.2 KiB libxcrypt s390x 4.4.36-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 274.7 KiB libxml2 s390x 2.12.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB libzstd s390x 1.5.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 859.8 KiB lua-libs s390x 5.4.6-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 324.9 KiB lua-srpm-macros noarch 1-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 KiB lz4-libs s390x 1.9.4-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 169.2 KiB mpfr s390x 4.2.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 698.8 KiB ncurses-base noarch 6.4-8.20231001.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 324.7 KiB ncurses-libs s390x 6.4-8.20231001.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB ocaml-srpm-macros noarch 9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-14.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 104.0 B openldap s390x 2.6.6-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 669.0 KiB openssl-libs s390x 1:3.1.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.6 MiB p11-kit s390x 0.25.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB p11-kit-trust s390x 0.25.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 467.2 KiB package-notes-srpm-macros noarch 0.5-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam s390x 1.5.3-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB pam-libs s390x 1.5.3-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134.4 KiB pcre2 s390x 10.42-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 657.2 KiB pcre2-syntax noarch 10.42-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 235.1 KiB perl-srpm-macros noarch 1-51.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf s390x 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83.6 KiB pkgconf-m4 noarch 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13.9 KiB pkgconf-pkg-config s390x 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 988.0 B popt s390x 1.19-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.6 KiB publicsuffix-list-dafsa noarch 20230812-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 66.7 KiB pyproject-srpm-macros noarch 1.11.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 KiB python-srpm-macros noarch 3.12-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50.1 KiB qt5-srpm-macros noarch 5.15.12-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 492.0 B qt6-srpm-macros noarch 6.6.1-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline s390x 8.2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 552.8 KiB rpm s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB rpm-build-libs s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 206.2 KiB rpm-libs s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 809.6 KiB rpm-sequoia s390x 1.5.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB rust-srpm-macros noarch 25.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.1 KiB setup noarch 2.14.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.4 KiB sqlite-libs s390x 3.44.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB systemd-libs s390x 255.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB util-linux-core s390x 2.39.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB xxhash-libs s390x 0.8.2-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.0 KiB xz-libs s390x 5.4.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 221.6 KiB zig-srpm-macros noarch 1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip s390x 3.0-39.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 754.3 KiB zlib-ng-compat s390x 2.1.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121.2 KiB zstd s390x 1.5.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 52 MiB. Need to download 52 MiB. After this operation 179 MiB will be used (install 179 MiB, remove 0 B). [ 1/153] bzip2-0:1.0.8-16.fc39.s390x 100% | 1.4 MiB/s | 53.2 KiB | 00m00s [ 2/153] cpio-0:2.14-5.fc40.s390x 100% | 38.5 MiB/s | 275.9 KiB | 00m00s [ 3/153] diffutils-0:3.10-3.fc39.s390x 100% | 77.8 MiB/s | 398.2 KiB | 00m00s [ 4/153] fedora-release-common-0:40-0. 100% | 9.9 MiB/s | 20.2 KiB | 00m00s [ 5/153] findutils-1:4.9.0-6.fc40.s390 100% | 79.4 MiB/s | 487.8 KiB | 00m00s [ 6/153] gawk-0:5.2.2-2.fc39.s390x 100% | 120.3 MiB/s | 1.1 MiB | 00m00s [ 7/153] bash-0:5.2.21-2.fc40.s390x 100% | 24.3 MiB/s | 1.8 MiB | 00m00s [ 8/153] glibc-minimal-langpack-0:2.38 100% | 21.7 MiB/s | 88.9 KiB | 00m00s [ 9/153] coreutils-0:9.4-1.fc40.s390x 100% | 15.2 MiB/s | 1.2 MiB | 00m00s [ 10/153] grep-0:3.11-5.fc40.s390x 100% | 47.9 MiB/s | 294.1 KiB | 00m00s [ 11/153] info-0:7.1-1.fc40.s390x 100% | 38.1 MiB/s | 194.9 KiB | 00m00s [ 12/153] gzip-0:1.12-6.fc39.s390x 100% | 23.2 MiB/s | 166.3 KiB | 00m00s [ 13/153] rpm-build-0:4.19.1-2.fc40.s39 100% | 23.2 MiB/s | 71.4 KiB | 00m00s [ 14/153] redhat-rpm-config-0:274-1.fc4 100% | 18.0 MiB/s | 73.9 KiB | 00m00s [ 15/153] patch-0:2.7.6-22.fc39.s390x 100% | 26.1 MiB/s | 133.8 KiB | 00m00s [ 16/153] sed-0:4.8-14.fc39.s390x 100% | 41.9 MiB/s | 300.3 KiB | 00m00s [ 17/153] tar-2:1.35-2.fc40.s390x 100% | 105.6 MiB/s | 864.7 KiB | 00m00s [ 18/153] unzip-0:6.0-62.fc39.s390x 100% | 27.1 MiB/s | 193.9 KiB | 00m00s [ 19/153] util-linux-0:2.39.3-1.fc40.s3 100% | 135.1 MiB/s | 1.1 MiB | 00m00s [ 20/153] which-0:2.21-40.fc39.s390x 100% | 14.1 MiB/s | 43.2 KiB | 00m00s [ 21/153] shadow-utils-2:4.14.0-2.fc40. 100% | 52.8 MiB/s | 1.2 MiB | 00m00s [ 22/153] xz-0:5.4.5-1.fc40.s390x 100% | 40.0 MiB/s | 532.1 KiB | 00m00s [ 23/153] glibc-0:2.38.9000-30.fc40.s39 100% | 133.5 MiB/s | 1.9 MiB | 00m00s [ 24/153] glibc-common-0:2.38.9000-30.f 100% | 31.2 MiB/s | 383.7 KiB | 00m00s [ 25/153] xz-libs-0:5.4.5-1.fc40.s390x 100% | 22.3 MiB/s | 114.2 KiB | 00m00s [ 26/153] audit-libs-0:3.1.2-5.fc40.s39 100% | 23.7 MiB/s | 121.2 KiB | 00m00s [ 27/153] libblkid-0:2.39.3-1.fc40.s390 100% | 29.4 MiB/s | 120.5 KiB | 00m00s [ 28/153] authselect-libs-0:1.4.3-1.fc4 100% | 38.0 MiB/s | 233.7 KiB | 00m00s [ 29/153] libcap-ng-0:0.8.4-2.fc40.s390 100% | 8.0 MiB/s | 32.9 KiB | 00m00s [ 30/153] glibc-gconv-extra-0:2.38.9000 100% | 92.4 MiB/s | 1.7 MiB | 00m00s [ 31/153] libfdisk-0:2.39.3-1.fc40.s390 100% | 26.9 MiB/s | 165.5 KiB | 00m00s [ 32/153] libmount-0:2.39.3-1.fc40.s390 100% | 25.7 MiB/s | 158.2 KiB | 00m00s [ 33/153] libselinux-0:3.6-2.fc40.s390x 100% | 22.5 MiB/s | 92.2 KiB | 00m00s [ 34/153] libsmartcols-0:2.39.3-1.fc40. 100% | 17.0 MiB/s | 69.8 KiB | 00m00s [ 35/153] libutempter-0:1.2.1-10.fc39.s 100% | 8.5 MiB/s | 26.0 KiB | 00m00s [ 36/153] libuuid-0:2.39.3-1.fc40.s390x 100% | 6.9 MiB/s | 28.4 KiB | 00m00s [ 37/153] ncurses-libs-0:6.4-8.20231001 100% | 58.8 MiB/s | 361.5 KiB | 00m00s [ 38/153] pam-libs-0:1.5.3-9.fc40.s390x 100% | 19.2 MiB/s | 59.0 KiB | 00m00s [ 39/153] pam-0:1.5.3-9.fc40.s390x 100% | 72.6 MiB/s | 520.4 KiB | 00m00s [ 40/153] readline-0:8.2-4.fc39.s390x 100% | 44.6 MiB/s | 228.5 KiB | 00m00s [ 41/153] systemd-libs-0:255.1-1.fc40.s 100% | 138.9 MiB/s | 711.2 KiB | 00m00s [ 42/153] zlib-ng-compat-0:2.1.5-1.fc40 100% | 22.0 MiB/s | 67.7 KiB | 00m00s [ 43/153] util-linux-core-0:2.39.3-1.fc 100% | 80.8 MiB/s | 496.5 KiB | 00m00s [ 44/153] bzip2-libs-0:1.0.8-16.fc39.s3 100% | 15.1 MiB/s | 46.4 KiB | 00m00s [ 45/153] libacl-0:2.3.1-11.fc40.s390x 100% | 8.1 MiB/s | 24.8 KiB | 00m00s [ 46/153] libcap-0:2.69-1.fc40.s390x 100% | 27.6 MiB/s | 84.7 KiB | 00m00s [ 47/153] libgcc-0:13.2.1-6.fc40.s390x 100% | 16.7 MiB/s | 85.3 KiB | 00m00s [ 48/153] libzstd-0:1.5.5-4.fc39.s390x 100% | 66.9 MiB/s | 342.4 KiB | 00m00s [ 49/153] lz4-libs-0:1.9.4-4.fc39.s390x 100% | 19.7 MiB/s | 80.9 KiB | 00m00s [ 50/153] libattr-0:2.5.1-9.fc40.s390x 100% | 5.9 MiB/s | 18.1 KiB | 00m00s [ 51/153] libeconf-0:0.5.2-1.fc40.s390x 100% | 10.4 MiB/s | 32.0 KiB | 00m00s [ 52/153] libsemanage-0:3.6-1.fc40.s390 100% | 29.0 MiB/s | 118.6 KiB | 00m00s [ 53/153] libxcrypt-0:4.4.36-3.fc40.s39 100% | 24.1 MiB/s | 123.4 KiB | 00m00s [ 54/153] setup-0:2.14.5-1.fc40.noarch 100% | 36.2 MiB/s | 148.1 KiB | 00m00s [ 55/153] debugedit-0:5.0-12.fc40.s390x 100% | 15.9 MiB/s | 81.5 KiB | 00m00s [ 56/153] elfutils-0:0.190-4.fc40.s390x 100% | 79.6 MiB/s | 570.7 KiB | 00m00s [ 57/153] elfutils-libelf-0:0.190-4.fc4 100% | 32.5 MiB/s | 199.8 KiB | 00m00s [ 58/153] file-0:5.45-1.fc40.s390x 100% | 12.0 MiB/s | 49.1 KiB | 00m00s [ 59/153] pkgconf-pkg-config-0:1.9.5-2. 100% | 3.1 MiB/s | 9.6 KiB | 00m00s [ 60/153] popt-0:1.19-3.fc39.s390x 100% | 15.2 MiB/s | 62.2 KiB | 00m00s [ 61/153] rpm-0:4.19.1-2.fc40.s390x 100% | 82.9 MiB/s | 509.4 KiB | 00m00s [ 62/153] rpm-build-libs-0:4.19.1-2.fc4 100% | 23.7 MiB/s | 97.2 KiB | 00m00s [ 63/153] rpm-libs-0:4.19.1-2.fc40.s390 100% | 52.7 MiB/s | 323.7 KiB | 00m00s [ 64/153] binutils-0:2.41-20.fc40.s390x 100% | 166.2 MiB/s | 6.0 MiB | 00m00s [ 65/153] zstd-0:1.5.5-4.fc39.s390x 100% | 44.9 MiB/s | 505.7 KiB | 00m00s [ 66/153] ansible-srpm-macros-0:1-11.fc 100% | 6.7 MiB/s | 20.7 KiB | 00m00s [ 67/153] libarchive-0:3.7.2-1.fc40.s39 100% | 43.0 MiB/s | 440.0 KiB | 00m00s [ 68/153] dwz-0:0.15-3.fc39.s390x 100% | 23.4 MiB/s | 143.6 KiB | 00m00s [ 69/153] efi-srpm-macros-0:5-9.fc39.no 100% | 7.2 MiB/s | 22.2 KiB | 00m00s [ 70/153] fonts-srpm-macros-1:2.0.5-12. 100% | 8.6 MiB/s | 26.5 KiB | 00m00s [ 71/153] fpc-srpm-macros-0:1.3-8.fc39. 100% | 3.6 MiB/s | 7.4 KiB | 00m00s [ 72/153] forge-srpm-macros-0:0.2.0-1.f 100% | 4.5 MiB/s | 18.5 KiB | 00m00s [ 73/153] ghc-srpm-macros-0:1.6.1-3.fc4 100% | 2.6 MiB/s | 8.1 KiB | 00m00s [ 74/153] gnat-srpm-macros-0:6-3.fc39.n 100% | 2.9 MiB/s | 8.8 KiB | 00m00s [ 75/153] go-srpm-macros-0:3.3.1-1.fc40 100% | 6.8 MiB/s | 27.7 KiB | 00m00s [ 76/153] kernel-srpm-macros-0:1.0-20.f 100% | 5.1 MiB/s | 10.5 KiB | 00m00s [ 77/153] lua-srpm-macros-0:1-9.fc39.no 100% | 2.8 MiB/s | 8.6 KiB | 00m00s [ 78/153] ocaml-srpm-macros-0:9-1.fc40. 100% | 2.9 MiB/s | 9.0 KiB | 00m00s [ 79/153] openblas-srpm-macros-0:2-14.f 100% | 1.8 MiB/s | 7.5 KiB | 00m00s [ 80/153] package-notes-srpm-macros-0:0 100% | 3.6 MiB/s | 11.2 KiB | 00m00s [ 81/153] perl-srpm-macros-0:1-51.fc39. 100% | 2.6 MiB/s | 8.0 KiB | 00m00s [ 82/153] pyproject-srpm-macros-0:1.11. 100% | 4.8 MiB/s | 14.8 KiB | 00m00s [ 83/153] python-srpm-macros-0:3.12-5.f 100% | 8.1 MiB/s | 24.9 KiB | 00m00s [ 84/153] qt5-srpm-macros-0:5.15.12-1.f 100% | 2.7 MiB/s | 8.4 KiB | 00m00s [ 85/153] qt6-srpm-macros-0:6.6.1-3.fc4 100% | 2.9 MiB/s | 8.8 KiB | 00m00s [ 86/153] rust-srpm-macros-0:25.2-2.fc4 100% | 3.2 MiB/s | 13.0 KiB | 00m00s [ 87/153] zig-srpm-macros-0:1-1.fc40.no 100% | 2.6 MiB/s | 8.0 KiB | 00m00s [ 88/153] zip-0:3.0-39.fc40.s390x 100% | 69.0 MiB/s | 282.8 KiB | 00m00s [ 89/153] pkgconf-0:1.9.5-2.fc39.s390x 100% | 13.9 MiB/s | 42.6 KiB | 00m00s [ 90/153] pkgconf-m4-0:1.9.5-2.fc39.noa 100% | 4.5 MiB/s | 13.9 KiB | 00m00s [ 91/153] libpkgconf-0:1.9.5-2.fc39.s39 100% | 12.4 MiB/s | 38.1 KiB | 00m00s [ 92/153] ed-0:1.19-4.fc39.s390x 100% | 19.6 MiB/s | 80.1 KiB | 00m00s [ 93/153] authselect-0:1.4.3-1.fc40.s39 100% | 35.1 MiB/s | 143.9 KiB | 00m00s [ 94/153] gdbm-1:1.23-4.fc39.s390x 100% | 37.0 MiB/s | 151.4 KiB | 00m00s [ 95/153] gdbm-libs-1:1.23-4.fc39.s390x 100% | 18.9 MiB/s | 58.0 KiB | 00m00s [ 96/153] libnsl2-0:2.0.0-6.fc39.s390x 100% | 7.2 MiB/s | 29.6 KiB | 00m00s [ 97/153] libpwquality-0:1.4.5-6.fc39.s 100% | 26.7 MiB/s | 109.3 KiB | 00m00s [ 98/153] libtirpc-0:1.3.4-1.rc1.fc40.s 100% | 31.3 MiB/s | 96.1 KiB | 00m00s [ 99/153] crypto-policies-0:20231204-1. 100% | 16.8 MiB/s | 68.7 KiB | 00m00s [100/153] ca-certificates-0:2023.2.62_v 100% | 120.3 MiB/s | 862.6 KiB | 00m00s [101/153] ncurses-base-0:6.4-8.20231001 100% | 20.5 MiB/s | 63.1 KiB | 00m00s [102/153] openssl-libs-1:3.1.4-1.fc40.s 100% | 124.8 MiB/s | 1.9 MiB | 00m00s [103/153] krb5-libs-0:1.21.2-2.fc40.s39 100% | 94.6 MiB/s | 775.2 KiB | 00m00s [104/153] libcom_err-0:1.47.0-2.fc39.s3 100% | 6.3 MiB/s | 26.0 KiB | 00m00s [105/153] libsepol-0:3.6-1.fc40.s390x 100% | 67.5 MiB/s | 345.7 KiB | 00m00s [106/153] pcre2-0:10.42-2.fc40.s390x 100% | 48.8 MiB/s | 250.0 KiB | 00m00s [107/153] cracklib-0:2.9.11-2.fc39.s390 100% | 16.3 MiB/s | 83.5 KiB | 00m00s [108/153] libverto-0:0.3.2-6.fc39.s390x 100% | 5.1 MiB/s | 20.8 KiB | 00m00s [109/153] keyutils-libs-0:1.6.3-1.fc40. 100% | 7.6 MiB/s | 31.3 KiB | 00m00s [110/153] libxml2-0:2.12.3-1.fc40.s390x 100% | 114.7 MiB/s | 704.9 KiB | 00m00s [111/153] basesystem-0:11-18.fc39.noarc 100% | 2.3 MiB/s | 7.2 KiB | 00m00s [112/153] gmp-1:6.2.1-5.fc39.s390x 100% | 63.4 MiB/s | 324.5 KiB | 00m00s [113/153] libsigsegv-0:2.14-5.fc39.s390 100% | 8.7 MiB/s | 26.7 KiB | 00m00s [114/153] filesystem-0:3.18-6.fc39.s390 100% | 133.6 MiB/s | 1.1 MiB | 00m00s [115/153] mpfr-0:4.2.1-1.fc40.s390x 100% | 58.0 MiB/s | 297.2 KiB | 00m00s [116/153] fedora-repos-0:40-0.2.noarch 100% | 2.3 MiB/s | 9.3 KiB | 00m00s [117/153] file-libs-0:5.45-1.fc40.s390x 100% | 107.2 MiB/s | 768.8 KiB | 00m00s [118/153] elfutils-libs-0:0.190-4.fc40. 100% | 53.8 MiB/s | 275.7 KiB | 00m00s [119/153] libstdc++-0:13.2.1-6.fc40.s39 100% | 116.3 MiB/s | 953.1 KiB | 00m00s [120/153] p11-kit-0:0.25.3-1.fc40.s390x 100% | 84.4 MiB/s | 518.6 KiB | 00m00s [121/153] p11-kit-trust-0:0.25.3-1.fc40 100% | 34.7 MiB/s | 142.1 KiB | 00m00s [122/153] coreutils-common-0:9.4-1.fc40 100% | 141.5 MiB/s | 2.1 MiB | 00m00s [123/153] alternatives-0:1.25-1.fc39.s3 100% | 7.7 MiB/s | 39.3 KiB | 00m00s [124/153] binutils-gold-0:2.41-20.fc40. 100% | 142.4 MiB/s | 1.0 MiB | 00m00s [125/153] elfutils-debuginfod-client-0: 100% | 9.3 MiB/s | 38.2 KiB | 00m00s [126/153] jansson-0:2.13.1-7.fc39.s390x 100% | 10.8 MiB/s | 44.1 KiB | 00m00s [127/153] lua-libs-0:5.4.6-3.fc39.s390x 100% | 46.1 MiB/s | 141.7 KiB | 00m00s [128/153] sqlite-libs-0:3.44.2-1.fc40.s 100% | 120.7 MiB/s | 741.5 KiB | 00m00s [129/153] rpm-sequoia-0:1.5.0-2.fc40.s3 100% | 122.5 MiB/s | 1.0 MiB | 00m00s [130/153] libgomp-0:13.2.1-6.fc40.s390x 100% | 63.5 MiB/s | 325.2 KiB | 00m00s [131/153] pcre2-syntax-0:10.42-2.fc40.n 100% | 34.9 MiB/s | 143.1 KiB | 00m00s [132/153] libtasn1-0:4.19.0-3.fc39.s390 100% | 18.9 MiB/s | 77.2 KiB | 00m00s [133/153] libffi-0:3.4.4-5.fc40.s390x 100% | 11.5 MiB/s | 35.4 KiB | 00m00s [134/153] fedora-gpg-keys-0:40-0.2.noar 100% | 29.1 MiB/s | 119.4 KiB | 00m00s [135/153] fedora-repos-rawhide-0:40-0.2 100% | 2.9 MiB/s | 8.9 KiB | 00m00s [136/153] elfutils-default-yama-scope-0 100% | 4.2 MiB/s | 12.8 KiB | 00m00s [137/153] fedora-release-0:40-0.26.noar 100% | 3.2 MiB/s | 9.7 KiB | 00m00s [138/153] curl-0:8.5.0-1.fc40.s390x 100% | 72.7 MiB/s | 372.2 KiB | 00m00s [139/153] xxhash-libs-0:0.8.2-1.fc39.s3 100% | 9.0 MiB/s | 36.8 KiB | 00m00s [140/153] fedora-release-identity-basic 100% | 2.6 MiB/s | 10.5 KiB | 00m00s [141/153] libcurl-0:8.5.0-1.fc40.s390x 100% | 59.0 MiB/s | 362.4 KiB | 00m00s [142/153] gdb-minimal-0:14.1-1.fc40.s39 100% | 229.6 MiB/s | 4.1 MiB | 00m00s [143/153] libbrotli-0:1.1.0-1.fc40.s390 100% | 52.8 MiB/s | 378.5 KiB | 00m00s [144/153] libidn2-0:2.3.4-3.fc39.s390x 100% | 15.5 MiB/s | 111.3 KiB | 00m00s [145/153] libnghttp2-0:1.58.0-1.fc40.s3 100% | 25.5 MiB/s | 78.4 KiB | 00m00s [146/153] libpsl-0:0.21.2-4.fc39.s390x 100% | 15.4 MiB/s | 63.2 KiB | 00m00s [147/153] libssh-0:0.10.6-2.fc40.s390x 100% | 51.1 MiB/s | 209.3 KiB | 00m00s [148/153] openldap-0:2.6.6-1.fc39.s390x 100% | 36.6 MiB/s | 262.0 KiB | 00m00s [149/153] cyrus-sasl-lib-0:2.1.28-11.fc 100% | 114.3 MiB/s | 819.4 KiB | 00m00s [150/153] libevent-0:2.1.12-9.fc39.s390 100% | 50.7 MiB/s | 259.6 KiB | 00m00s [151/153] libssh-config-0:0.10.6-2.fc40 100% | 3.0 MiB/s | 9.1 KiB | 00m00s [152/153] publicsuffix-list-dafsa-0:202 100% | 18.7 MiB/s | 57.4 KiB | 00m00s [153/153] libunistring-0:1.1-5.fc40.s39 100% | 90.6 MiB/s | 556.3 KiB | 00m00s -------------------------------------------------------------------------------- [153/153] Total 100% | 134.6 MiB/s | 51.9 MiB | 00m00s Running transaction [ 1/155] Verify package files 100% | 850.0 B/s | 153.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-6.fc39.s390x >>> Stop pre-transaction scriptlet: filesystem-0:3.18-6.fc39.s390x [ 2/155] Prepare transaction 100% | 2.9 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:13.2.1-6. 100% | 170.8 MiB/s | 174.9 KiB | 00m00s >>> Running post-install scriptlet: libgcc-0:13.2.1-6.fc40.s390x >>> Stop post-install scriptlet: libgcc-0:13.2.1-6.fc40.s390x [ 4/155] Installing crypto-policies-0: 100% | 35.5 MiB/s | 181.7 KiB | 00m00s >>> Running post-install scriptlet: crypto-policies-0:20231204-1.git1e3a2e4.fc40 >>> Stop post-install scriptlet: crypto-policies-0:20231204-1.git1e3a2e4.fc40.no [ 5/155] Installing fedora-release-ide 100% | 0.0 B/s | 952.0 B | 00m00s [ 6/155] Installing fedora-gpg-keys-0: 100% | 40.9 MiB/s | 167.6 KiB | 00m00s [ 7/155] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/155] Installing fedora-repos-0:40- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 9/155] Installing fedora-release-com 100% | 22.6 MiB/s | 23.1 KiB | 00m00s [ 10/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 11/155] Installing setup-0:2.14.5-1.f 100% | 54.5 MiB/s | 725.8 KiB | 00m00s >>> Running post-install scriptlet: setup-0:2.14.5-1.fc40.noarch >>> Stop post-install scriptlet: setup-0:2.14.5-1.fc40.noarch [ 12/155] Installing filesystem-0:3.18- 100% | 2.8 MiB/s | 212.4 KiB | 00m00s [ 13/155] Installing basesystem-0:11-18 100% | 0.0 B/s | 124.0 B | 00m00s [ 14/155] Installing publicsuffix-list- 100% | 0.0 B/s | 67.4 KiB | 00m00s [ 15/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 16/155] Installing pcre2-syntax-0:10. 100% | 232.0 MiB/s | 237.6 KiB | 00m00s [ 17/155] Installing coreutils-common-0 100% | 337.2 MiB/s | 11.5 MiB | 00m00s [ 18/155] Installing ncurses-base-0:6.4 100% | 85.5 MiB/s | 350.1 KiB | 00m00s [ 19/155] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 20/155] Installing ncurses-libs-0:6.4 100% | 212.5 MiB/s | 1.1 MiB | 00m00s >>> Running pre-install scriptlet: glibc-0:2.38.9000-30.fc40.s390x >>> Stop pre-install scriptlet: glibc-0:2.38.9000-30.fc40.s390x [ 21/155] Installing glibc-0:2.38.9000- 100% | 191.3 MiB/s | 5.4 MiB | 00m00s >>> Running post-install scriptlet: glibc-0:2.38.9000-30.fc40.s390x >>> Stop post-install scriptlet: glibc-0:2.38.9000-30.fc40.s390x [ 22/155] Installing bash-0:5.2.21-2.fc 100% | 333.6 MiB/s | 8.3 MiB | 00m00s >>> Running post-install scriptlet: bash-0:5.2.21-2.fc40.s390x >>> Stop post-install scriptlet: bash-0:5.2.21-2.fc40.s390x [ 23/155] Installing glibc-common-0:2.3 100% | 183.4 MiB/s | 1.1 MiB | 00m00s [ 24/155] Installing glibc-gconv-extra- 100% | 229.4 MiB/s | 7.8 MiB | 00m00s >>> Running post-install scriptlet: glibc-gconv-extra-0:2.38.9000-30.fc40.s390x >>> Stop post-install scriptlet: glibc-gconv-extra-0:2.38.9000-30.fc40.s390x [ 25/155] Installing zlib-ng-compat-0:2 100% | 119.2 MiB/s | 122.1 KiB | 00m00s [ 26/155] Installing xz-libs-0:5.4.5-1. 100% | 217.5 MiB/s | 222.7 KiB | 00m00s [ 27/155] Installing bzip2-libs-0:1.0.8 100% | 87.5 MiB/s | 89.6 KiB | 00m00s [ 28/155] Installing libuuid-0:2.39.3-1 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 29/155] Installing readline-0:8.2-4.f 100% | 271.0 MiB/s | 555.0 KiB | 00m00s [ 30/155] Installing libzstd-0:1.5.5-4. 100% | 280.3 MiB/s | 861.1 KiB | 00m00s [ 31/155] Installing elfutils-libelf-0: 100% | 332.5 MiB/s | 1.0 MiB | 00m00s [ 32/155] Installing popt-0:1.19-3.fc39 100% | 73.9 MiB/s | 151.3 KiB | 00m00s [ 33/155] Installing libstdc++-0:13.2.1 100% | 302.7 MiB/s | 3.0 MiB | 00m00s [ 34/155] Installing libblkid-0:2.39.3- 100% | 251.9 MiB/s | 258.0 KiB | 00m00s [ 35/155] Installing libattr-0:2.5.1-9. 100% | 0.0 B/s | 29.3 KiB | 00m00s [ 36/155] Installing libacl-0:2.3.1-11. 100% | 0.0 B/s | 40.6 KiB | 00m00s [ 37/155] Installing libxcrypt-0:4.4.36 100% | 270.9 MiB/s | 277.4 KiB | 00m00s [ 38/155] Installing gmp-1:6.2.1-5.fc39 100% | 249.8 MiB/s | 767.4 KiB | 00m00s [ 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281.7 MiB/s | 2.0 MiB | 00m00s [ 52/155] Installing libsmartcols-0:2.3 100% | 149.7 MiB/s | 153.3 KiB | 00m00s [ 53/155] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 68.1 KiB | 00m00s [ 54/155] Installing libsepol-0:3.6-1.f 100% | 274.5 MiB/s | 843.2 KiB | 00m00s [ 55/155] Installing pcre2-0:10.42-2.fc 100% | 321.6 MiB/s | 658.6 KiB | 00m00s [ 56/155] Installing libselinux-0:3.6-2 100% | 185.7 MiB/s | 190.1 KiB | 00m00s [ 57/155] Installing sed-0:4.8-14.fc39. 100% | 199.6 MiB/s | 817.6 KiB | 00m00s [ 58/155] Installing grep-0:3.11-5.fc40 100% | 202.9 MiB/s | 1.0 MiB | 00m00s [ 59/155] Installing findutils-1:4.9.0- 100% | 248.2 MiB/s | 1.5 MiB | 00m00s [ 60/155] Installing xz-0:5.4.5-1.fc40. 100% | 250.1 MiB/s | 2.0 MiB | 00m00s [ 61/155] Installing libmount-0:2.39.3- 100% | 180.3 MiB/s | 369.3 KiB | 00m00s [ 62/155] Installing alternatives-0:1.2 100% | 66.2 MiB/s | 67.8 KiB | 00m00s [ 63/155] Installing jansson-0:2.13.1-7 100% | 91.3 MiB/s | 93.5 KiB | 00m00s [ 64/155] Installing lua-libs-0:5.4.6-3 100% | 318.4 MiB/s | 326.1 KiB | 00m00s [ 65/155] Installing libtasn1-0:4.19.0- 100% | 184.9 MiB/s | 189.3 KiB | 00m00s [ 66/155] Installing libunistring-0:1.1 100% | 294.9 MiB/s | 1.8 MiB | 00m00s [ 67/155] Installing libidn2-0:2.3.4-3. 100% | 160.6 MiB/s | 328.8 KiB | 00m00s [ 68/155] Installing libpsl-0:0.21.2-4. 100% | 79.5 MiB/s | 81.4 KiB | 00m00s [ 69/155] Installing util-linux-core-0: 100% | 197.9 MiB/s | 1.4 MiB | 00m00s [ 70/155] Installing tar-2:1.35-2.fc40. 100% | 334.3 MiB/s | 3.0 MiB | 00m00s [ 71/155] Installing libsemanage-0:3.6- 100% | 148.0 MiB/s | 303.1 KiB | 00m00s [ 72/155] Installing shadow-utils-2:4.1 100% | 151.9 MiB/s | 4.1 MiB | 00m00s >>> Running pre-install scriptlet: libutempter-0:1.2.1-10.fc39.s390x >>> Stop pre-install scriptlet: libutempter-0:1.2.1-10.fc39.s390x [ 73/155] Installing libutempter-0:1.2. 100% | 57.9 MiB/s | 59.3 KiB | 00m00s [ 74/155] Installing zip-0:3.0-39.fc40. 100% | 246.8 MiB/s | 758.2 KiB | 00m00s [ 75/155] Installing gdbm-1:1.23-4.fc39 100% | 159.1 MiB/s | 488.8 KiB | 00m00s [ 76/155] Installing cyrus-sasl-lib-0:2 100% | 297.1 MiB/s | 2.4 MiB | 00m00s [ 77/155] Installing zstd-0:1.5.5-4.fc3 100% | 358.0 MiB/s | 1.8 MiB | 00m00s [ 78/155] Installing libfdisk-0:2.39.3- 100% | 191.4 MiB/s | 392.0 KiB | 00m00s [ 79/155] Installing bzip2-0:1.0.8-16.f 100% | 101.3 MiB/s | 103.7 KiB | 00m00s [ 80/155] Installing libxml2-0:2.12.3-1 100% | 267.8 MiB/s | 1.9 MiB | 00m00s [ 81/155] Installing sqlite-libs-0:3.44 100% | 255.6 MiB/s | 1.5 MiB | 00m00s [ 82/155] Installing ed-0:1.19-4.fc39.s 100% | 142.9 MiB/s | 146.3 KiB | 00m00s [ 83/155] Installing patch-0:2.7.6-22.f 100% | 269.4 MiB/s | 275.8 KiB | 00m00s [ 84/155] Installing elfutils-default-y 100% | 510.7 KiB/s | 2.0 KiB | 00m00s >>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.190-4.fc40.n >>> Stop post-install scriptlet: elfutils-default-yama-scope-0:0.190-4.fc40.noar [ 85/155] Installing cpio-0:2.14-5.fc40 100% | 209.2 MiB/s | 1.0 MiB | 00m00s [ 86/155] Installing diffutils-0:3.10-3 100% | 264.8 MiB/s | 1.6 MiB | 00m00s [ 87/155] Installing libpkgconf-0:1.9.5 100% | 84.9 MiB/s | 86.9 KiB | 00m00s [ 88/155] Installing pkgconf-0:1.9.5-2. 100% | 84.1 MiB/s | 86.1 KiB | 00m00s [ 89/155] Installing keyutils-libs-0:1. 100% | 54.3 MiB/s | 55.6 KiB | 00m00s [ 90/155] Installing libverto-0:0.3.2-6 100% | 0.0 B/s | 31.1 KiB | 00m00s [ 91/155] Installing libsigsegv-0:2.14- 100% | 49.5 MiB/s | 50.7 KiB | 00m00s [ 92/155] Installing gawk-0:5.2.2-2.fc3 100% | 257.1 MiB/s | 1.8 MiB | 00m00s [ 93/155] Installing libgomp-0:13.2.1-6 100% | 245.5 MiB/s | 502.7 KiB | 00m00s [ 94/155] Installing libffi-0:3.4.4-5.f 100% | 65.0 MiB/s | 66.5 KiB | 00m00s [ 95/155] Installing p11-kit-0:0.25.3-1 100% | 226.4 MiB/s | 2.5 MiB | 00m00s [ 96/155] Installing p11-kit-trust-0:0. 100% | 65.4 MiB/s | 469.0 KiB | 00m00s >>> Running post-install scriptlet: p11-kit-trust-0:0.25.3-1.fc40.s390x >>> Stop post-install scriptlet: p11-kit-trust-0:0.25.3-1.fc40.s390x [ 97/155] Installing openssl-libs-1:3.1 100% | 268.7 MiB/s | 5.6 MiB | 00m00s [ 98/155] Installing coreutils-0:9.4-1. 100% | 256.5 MiB/s | 5.9 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40.n >>> Stop pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40.noar [ 99/155] Installing ca-certificates-0: 100% | 2.3 MiB/s | 2.3 MiB | 00m01s >>> Running post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40. >>> Stop post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40.noa [100/155] Installing krb5-libs-0:1.21.2 100% | 221.5 MiB/s | 2.4 MiB | 00m00s [101/155] Installing libtirpc-0:1.3.4-1 100% | 211.3 MiB/s | 216.3 KiB | 00m00s [102/155] Installing gzip-0:1.12-6.fc39 100% | 190.1 MiB/s | 389.3 KiB | 00m00s >>> Running pre-install scriptlet: authselect-libs-0:1.4.3-1.fc40.s390x >>> Stop pre-install scriptlet: authselect-libs-0:1.4.3-1.fc40.s390x [103/155] Installing authselect-libs-0: 100% | 196.8 MiB/s | 1.0 MiB | 00m00s [104/155] Installing authselect-0:1.4.3 100% | 78.4 MiB/s | 160.7 KiB | 00m00s [105/155] Installing cracklib-0:2.9.11- 100% | 85.1 MiB/s | 261.4 KiB | 00m00s [106/155] Installing libpwquality-0:1.4 100% | 105.8 MiB/s | 433.2 KiB | 00m00s [107/155] Installing libnsl2-0:2.0.0-6. 100% | 61.4 MiB/s | 62.8 KiB | 00m00s [108/155] Installing pam-0:1.5.3-9.fc40 100% | 149.2 MiB/s | 1.8 MiB | 00m00s [109/155] Installing libssh-0:0.10.6-2. 100% | 259.3 MiB/s | 531.1 KiB | 00m00s [110/155] Installing libarchive-0:3.7.2 100% | 247.2 MiB/s | 1.0 MiB | 00m00s [111/155] Installing rpm-sequoia-0:1.5. 100% | 301.1 MiB/s | 3.0 MiB | 00m00s [112/155] Installing rpm-libs-0:4.19.1- 100% | 264.0 MiB/s | 811.1 KiB | 00m00s [113/155] Installing libevent-0:2.1.12- 100% | 306.8 MiB/s | 942.5 KiB | 00m00s [114/155] Installing openldap-0:2.6.6-1 100% | 219.0 MiB/s | 672.8 KiB | 00m00s [115/155] Installing xxhash-libs-0:0.8. 100% | 67.8 MiB/s | 69.4 KiB | 00m00s [116/155] Installing libbrotli-0:1.1.0- 100% | 224.5 MiB/s | 919.4 KiB | 00m00s [117/155] Installing libnghttp2-0:1.58. 100% | 171.0 MiB/s | 175.1 KiB | 00m00s [118/155] Installing libcurl-0:8.5.0-1. 100% | 266.1 MiB/s | 817.6 KiB | 00m00s [119/155] Installing elfutils-debuginfo 100% | 64.9 MiB/s | 66.4 KiB | 00m00s [120/155] Installing elfutils-libs-0:0. 100% | 239.6 MiB/s | 735.9 KiB | 00m00s [121/155] Installing binutils-gold-0:2. 100% | 194.3 MiB/s | 2.9 MiB | 00m00s >>> Running post-install scriptlet: binutils-gold-0:2.41-20.fc40.s390x >>> Stop post-install scriptlet: binutils-gold-0:2.41-20.fc40.s390x [122/155] Installing binutils-0:2.41-20 100% | 314.6 MiB/s | 26.1 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.41-20.fc40.s390x >>> Stop post-install scriptlet: binutils-0:2.41-20.fc40.s390x [123/155] Installing elfutils-0:0.190-4 100% | 293.1 MiB/s | 2.9 MiB | 00m00s [124/155] Installing gdb-minimal-0:14.1 100% | 311.8 MiB/s | 12.5 MiB | 00m00s [125/155] Installing debugedit-0:5.0-12 100% | 200.4 MiB/s | 205.2 KiB | 00m00s [126/155] Installing rpm-build-libs-0:4 100% | 202.2 MiB/s | 207.0 KiB | 00m00s [127/155] Installing curl-0:8.5.0-1.fc4 100% | 80.9 MiB/s | 828.5 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.1-2.fc40.s390x >>> Stop pre-install scriptlet: rpm-0:4.19.1-2.fc40.s390x [128/155] Installing rpm-0:4.19.1-2.fc4 100% | 133.3 MiB/s | 2.4 MiB | 00m00s [129/155] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [130/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [131/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [132/155] Installing pkgconf-m4-0:1.9.5 100% | 0.0 B/s | 14.3 KiB | 00m00s [133/155] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [134/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.8 KiB | 00m00s [135/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [136/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 768.0 B | 00m00s [137/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [138/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [139/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 384.0 B | 00m00s [140/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [141/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [142/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [143/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 648.0 B | 00m00s [144/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [145/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.1 KiB | 00m00s [146/155] Installing fonts-srpm-macros- 100% | 0.0 B/s | 56.5 KiB | 00m00s [147/155] Installing forge-srpm-macros- 100% | 0.0 B/s | 38.6 KiB | 00m00s [148/155] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 61.6 KiB | 00m00s [149/155] Installing python-srpm-macros 100% | 50.1 MiB/s | 51.3 KiB | 00m00s [150/155] Installing redhat-rpm-config- 100% | 91.2 MiB/s | 186.8 KiB | 00m00s [151/155] Installing rpm-build-0:4.19.1 100% | 61.3 MiB/s | 188.3 KiB | 00m00s [152/155] Installing pyproject-srpm-mac 100% | 2.0 MiB/s | 2.1 KiB | 00m00s [153/155] Installing util-linux-0:2.39. 100% | 197.8 MiB/s | 3.6 MiB | 00m00s [154/155] Installing which-0:2.21-40.fc 100% | 84.1 MiB/s | 86.1 KiB | 00m00s [155/155] Installing info-0:7.1-1.fc40. 100% | 349.9 KiB/s | 405.5 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-6.fc39.s390x >>> Stop post-transaction scriptlet: filesystem-0:3.18-6.fc39.s390x >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.4.3-1.fc40.s390x >>> Stop post-transaction scriptlet: authselect-libs-0:1.4.3-1.fc40.s390x >>> Running post-transaction scriptlet: rpm-0:4.19.1-2.fc40.s390x >>> Stop post-transaction scriptlet: rpm-0:4.19.1-2.fc40.s390x >>> Running trigger-install scriptlet: glibc-common-0:2.38.9000-30.fc40.s390x >>> Stop trigger-install scriptlet: glibc-common-0:2.38.9000-30.fc40.s390x >>> Running trigger-install scriptlet: info-0:7.1-1.fc40.s390x >>> Stop trigger-install scriptlet: info-0:7.1-1.fc40.s390x Warning: skipped PGP checks for 153 package(s). Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.s390x ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc40.s390x authselect-1.4.3-1.fc40.s390x authselect-libs-1.4.3-1.fc40.s390x basesystem-11-18.fc39.noarch bash-5.2.21-2.fc40.s390x binutils-2.41-20.fc40.s390x binutils-gold-2.41-20.fc40.s390x bzip2-1.0.8-16.fc39.s390x bzip2-libs-1.0.8-16.fc39.s390x ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-1.fc40.s390x coreutils-common-9.4-1.fc40.s390x cpio-2.14-5.fc40.s390x cracklib-2.9.11-2.fc39.s390x crypto-policies-20231204-1.git1e3a2e4.fc40.noarch curl-8.5.0-1.fc40.s390x cyrus-sasl-lib-2.1.28-11.fc39.s390x debugedit-5.0-12.fc40.s390x diffutils-3.10-3.fc39.s390x dwz-0.15-3.fc39.s390x ed-1.19-4.fc39.s390x efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc40.s390x elfutils-debuginfod-client-0.190-4.fc40.s390x elfutils-default-yama-scope-0.190-4.fc40.noarch elfutils-libelf-0.190-4.fc40.s390x elfutils-libs-0.190-4.fc40.s390x fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.26.noarch fedora-release-common-40-0.26.noarch fedora-release-identity-basic-40-0.26.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.s390x file-libs-5.45-1.fc40.s390x filesystem-3.18-6.fc39.s390x findutils-4.9.0-6.fc40.s390x fonts-srpm-macros-2.0.5-12.fc39.noarch forge-srpm-macros-0.2.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.s390x gdb-minimal-14.1-1.fc40.s390x gdbm-1.23-4.fc39.s390x gdbm-libs-1.23-4.fc39.s390x ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-30.fc40.s390x glibc-common-2.38.9000-30.fc40.s390x glibc-gconv-extra-2.38.9000-30.fc40.s390x glibc-minimal-langpack-2.38.9000-30.fc40.s390x gmp-6.2.1-5.fc39.s390x gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc40.noarch grep-3.11-5.fc40.s390x gzip-1.12-6.fc39.s390x info-7.1-1.fc40.s390x jansson-2.13.1-7.fc39.s390x kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.3-1.fc40.s390x krb5-libs-1.21.2-2.fc40.s390x libacl-2.3.1-11.fc40.s390x libarchive-3.7.2-1.fc40.s390x libattr-2.5.1-9.fc40.s390x libblkid-2.39.3-1.fc40.s390x libbrotli-1.1.0-1.fc40.s390x libcap-2.69-1.fc40.s390x libcap-ng-0.8.4-2.fc40.s390x libcom_err-1.47.0-2.fc39.s390x libcurl-8.5.0-1.fc40.s390x libeconf-0.5.2-1.fc40.s390x libevent-2.1.12-9.fc39.s390x libfdisk-2.39.3-1.fc40.s390x libffi-3.4.4-5.fc40.s390x libgcc-13.2.1-6.fc40.s390x libgomp-13.2.1-6.fc40.s390x libidn2-2.3.4-3.fc39.s390x libmount-2.39.3-1.fc40.s390x libnghttp2-1.58.0-1.fc40.s390x libnsl2-2.0.0-6.fc39.s390x libpkgconf-1.9.5-2.fc39.s390x libpsl-0.21.2-4.fc39.s390x libpwquality-1.4.5-6.fc39.s390x libselinux-3.6-2.fc40.s390x libsemanage-3.6-1.fc40.s390x libsepol-3.6-1.fc40.s390x libsigsegv-2.14-5.fc39.s390x libsmartcols-2.39.3-1.fc40.s390x libssh-0.10.6-2.fc40.s390x libssh-config-0.10.6-2.fc40.noarch libstdc++-13.2.1-6.fc40.s390x libtasn1-4.19.0-3.fc39.s390x libtirpc-1.3.4-1.rc1.fc40.s390x libunistring-1.1-5.fc40.s390x libutempter-1.2.1-10.fc39.s390x libuuid-2.39.3-1.fc40.s390x libverto-0.3.2-6.fc39.s390x libxcrypt-4.4.36-3.fc40.s390x libxml2-2.12.3-1.fc40.s390x libzstd-1.5.5-4.fc39.s390x lua-libs-5.4.6-3.fc39.s390x lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.s390x mpfr-4.2.1-1.fc40.s390x ncurses-base-6.4-8.20231001.fc40.noarch ncurses-libs-6.4-8.20231001.fc40.s390x ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.s390x openssl-libs-3.1.4-1.fc40.s390x p11-kit-0.25.3-1.fc40.s390x p11-kit-trust-0.25.3-1.fc40.s390x package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-9.fc40.s390x pam-libs-1.5.3-9.fc40.s390x patch-2.7.6-22.fc39.s390x pcre2-10.42-2.fc40.s390x pcre2-syntax-10.42-2.fc40.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.s390x pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.s390x popt-1.19-3.fc39.s390x publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.11.0-1.fc40.noarch python-srpm-macros-3.12-5.fc40.noarch qt5-srpm-macros-5.15.12-1.fc40.noarch qt6-srpm-macros-6.6.1-3.fc40.noarch readline-8.2-4.fc39.s390x redhat-rpm-config-274-1.fc40.noarch rpm-4.19.1-2.fc40.s390x rpm-build-4.19.1-2.fc40.s390x rpm-build-libs-4.19.1-2.fc40.s390x rpm-libs-4.19.1-2.fc40.s390x rpm-sequoia-1.5.0-2.fc40.s390x rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.s390x setup-2.14.5-1.fc40.noarch shadow-utils-4.14.0-2.fc40.s390x sqlite-libs-3.44.2-1.fc40.s390x systemd-libs-255.1-1.fc40.s390x tar-1.35-2.fc40.s390x unzip-6.0-62.fc39.s390x util-linux-2.39.3-1.fc40.s390x util-linux-core-2.39.3-1.fc40.s390x which-2.21-40.fc39.s390x xxhash-libs-0.8.2-1.fc39.s390x xz-5.4.5-1.fc40.s390x xz-libs-5.4.5-1.fc40.s390x zig-srpm-macros-1-1.fc40.noarch zip-3.0-39.fc40.s390x zlib-ng-compat-2.1.5-1.fc40.s390x zstd-1.5.5-4.fc39.s390x Start: buildsrpm Start: rpmbuild -bs Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-s390x-1704460510.976858/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-d4l4ay09/snakemake/snakemake.spec) Config(child) 1 minutes 56 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-7.32.4-3.fc40.src.rpm) Config(fedora-rawhide-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1704460510.976858/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1704460510.976858/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-1704460510.976858/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1-2.fc40.s390x rpm-sequoia-1.5.0-2.fc40.s390x python3-dnf-4.18.2-1.fc40.noarch yum-4.18.2-1.fc40.noarch dnf5-5.1.10-2.fc40.s390x dnf5-plugins-5.1.10-2.fc40.s390x Finish: chroot init Start: build phase for snakemake-7.32.4-3.fc40.src.rpm Start: build setup for snakemake-7.32.4-3.fc40.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 152.7 KiB/s | 4.1 KiB | 00m00s fedora 100% | 1.0 KiB/s | 5.0 KiB | 00m05s Copr repository 100% | 9.3 KiB/s | 2.2 KiB | 00m00s Repositories loaded. 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11:svn66584-77.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 337.2 KiB texlive-texlive.infra noarch 11:svn66512-77.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB texlive-times noarch 11:svn61719-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 992.2 KiB texlive-tipa noarch 11:svn29349.1.3-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.7 MiB texlive-titlesec noarch 11:svn59845-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 97.8 KiB texlive-tools noarch 11:svn64892-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 403.2 KiB texlive-txfonts noarch 11:svn15878.0-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB texlive-ucharcat noarch 11:svn38907-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.2 KiB texlive-ucs noarch 11:svn64114-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 137.7 KiB texlive-wasy-type1 noarch 11:svn53534-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 332.4 KiB texlive-wasysym noarch 11:svn54080-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.9 KiB texlive-wrapfig noarch 11:svn61719-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34.5 KiB texlive-xcolor noarch 11:svn63563-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 79.3 KiB texlive-xdvi s390x 11:svn62387-77.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 874.4 KiB texlive-xetexconfig noarch 11:svn45845-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 305.0 B texlive-xifthen noarch 11:svn38929-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB texlive-xkeyval noarch 11:svn63616-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 69.3 KiB texlive-xpatch noarch 11:svn54563-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26.8 KiB texlive-xstring noarch 11:svn65551-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 56.1 KiB texlive-xunicode noarch 11:svn30466.0.981-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 219.6 KiB texlive-zapfchan noarch 11:svn61719-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 178.1 KiB texlive-zapfding noarch 11:svn61719-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 79.5 KiB texlive-zref noarch 11:svn62977-70.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 816.8 KiB tzdata noarch 2023d-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB urw-base35-bookman-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB urw-base35-c059-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB urw-base35-d050000l-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 84.3 KiB urw-base35-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.3 KiB urw-base35-fonts-common noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.4 KiB urw-base35-gothic-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB urw-base35-nimbus-roman-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB urw-base35-nimbus-sans-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB urw-base35-p052-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 44.2 KiB urw-base35-z003-fonts noarch 20200910-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 390.8 KiB xdg-utils noarch 1.2.0~git20231511.21fb316-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 327.5 KiB xml-common noarch 0.6.3-62.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB xpdf-libs s390x 1:4.04-10.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB xprop s390x 1.2.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 62.6 KiB zziplib s390x 0.13.72-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 231.8 KiB Transaction Summary: Installing: 665 packages Total size of inbound packages is 378 MiB. Need to download 378 MiB. After this operation 1 GiB will be used (install 1 GiB, remove 0 B). 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378.3 MiB | 00m02s Running transaction [ 1/667] Verify package files 100% | 544.0 B/s | 665.0 B | 00m01s >>> Running pre-transaction scriptlet: texlive-base-11:20230311-77.fc39.s390x >>> Stop pre-transaction scriptlet: texlive-base-11:20230311-77.fc39.s390x [ 2/667] Prepare transaction 100% | 2.1 KiB/s | 665.0 B | 00m00s >>> Running pre-install scriptlet: texlive-base-11:20230311-77.fc39.s390x >>> Stop pre-install scriptlet: texlive-base-11:20230311-77.fc39.s390x [ 3/667] Installing texlive-base-11:20 100% | 365.8 MiB/s | 19.0 MiB | 00m00s [ 4/667] Installing texlive-lib-11:202 100% | 200.5 MiB/s | 615.9 KiB | 00m00s [ 5/667] Installing libpng-2:1.6.40-1. 100% | 248.9 MiB/s | 254.9 KiB | 00m00s [ 6/667] Installing libjpeg-turbo-0:2. 100% | 248.6 MiB/s | 509.1 KiB | 00m00s [ 7/667] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 8/667] Installing urw-base35-fonts-c 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 9/667] Installing expat-0:2.5.0-3.fc 100% | 297.3 MiB/s | 304.5 KiB 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texlive-texlive-sc 100% | 113.6 MiB/s | 349.1 KiB | 00m00s [294/667] Installing texlive-kpathsea-1 100% | 346.7 MiB/s | 2.1 MiB | 00m00s [295/667] Installing texlive-iftex-11:s 100% | 0.0 B/s | 30.3 KiB | 00m00s [296/667] Installing texlive-amsmath-11 100% | 262.4 MiB/s | 268.7 KiB | 00m00s [297/667] Installing texlive-kvoptions- 100% | 538.7 MiB/s | 551.6 KiB | 00m00s [298/667] Installing texlive-url-11:svn 100% | 0.0 B/s | 22.1 KiB | 00m00s [299/667] Installing texlive-ltxcmds-11 100% | 415.6 MiB/s | 425.5 KiB | 00m00s [300/667] Installing texlive-atbegshi-1 100% | 434.6 MiB/s | 445.1 KiB | 00m00s [301/667] Installing texlive-atveryend- 100% | 200.8 MiB/s | 411.2 KiB | 00m00s [302/667] Installing texlive-babel-11:s 100% | 65.3 MiB/s | 2.2 MiB | 00m00s [303/667] Installing texlive-etex-pkg-1 100% | 0.0 B/s | 19.0 KiB | 00m00s [304/667] Installing texlive-etoolbox-1 100% | 0.0 B/s | 67.7 KiB | 00m00s [305/667] Installing texlive-pdftexcmds 100% | 415.6 MiB/s | 425.6 KiB | 00m00s 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texlive-firstaid-1 100% | 291.8 MiB/s | 298.8 KiB | 00m00s [345/667] Installing texlive-hologo-11: 100% | 650.5 MiB/s | 666.1 KiB | 00m00s [346/667] Installing texlive-glyphlist- 100% | 89.0 MiB/s | 91.1 KiB | 00m00s [347/667] Installing texlive-ctablestac 100% | 0.0 B/s | 20.9 KiB | 00m00s [348/667] Installing texlive-luatexbase 100% | 0.0 B/s | 15.1 KiB | 00m00s [349/667] Installing texlive-titlesec-1 100% | 0.0 B/s | 98.9 KiB | 00m00s [350/667] Installing texlive-paralist-1 100% | 0.0 B/s | 24.1 KiB | 00m00s [351/667] Installing texlive-ragged2e-1 100% | 716.1 MiB/s | 733.3 KiB | 00m00s [352/667] Installing texlive-setspace-1 100% | 0.0 B/s | 22.4 KiB | 00m00s [353/667] Installing texlive-avantgar-1 100% | 177.4 MiB/s | 1.2 MiB | 00m00s [354/667] Installing texlive-bookman-11 100% | 176.2 MiB/s | 1.2 MiB | 00m00s [355/667] Installing texlive-charter-11 100% | 202.6 MiB/s | 415.0 KiB | 00m00s [356/667] Installing texlive-courier-11 100% | 183.0 MiB/s | 937.1 KiB | 00m00s [357/667] Installing texlive-helvetic-1 100% | 182.8 MiB/s | 1.8 MiB | 00m00s [358/667] Installing texlive-symbol-11: 100% | 80.1 MiB/s | 82.0 KiB | 00m00s [359/667] Installing texlive-times-11:s 100% | 166.4 MiB/s | 1.0 MiB | 00m00s [360/667] Installing texlive-utopia-11: 100% | 179.5 MiB/s | 551.4 KiB | 00m00s [361/667] Installing texlive-fpl-11:svn 100% | 317.9 MiB/s | 651.2 KiB | 00m00s [362/667] Installing texlive-mathpazo-1 100% | 113.9 MiB/s | 116.7 KiB | 00m00s [363/667] Installing texlive-psnfss-11: 100% | 38.9 MiB/s | 119.5 KiB | 00m00s [364/667] Installing texlive-latexconfi 100% | 0.0 B/s | 9.8 KiB | 00m00s [365/667] Installing texlive-bookmark-1 100% | 558.8 MiB/s | 572.2 KiB | 00m00s [366/667] Installing texlive-gettitlest 100% | 332.2 MiB/s | 340.1 KiB | 00m00s [367/667] Installing texlive-hycolor-11 100% | 403.5 MiB/s | 413.1 KiB | 00m00s [368/667] Installing texlive-kvdefineke 100% | 308.1 MiB/s | 315.5 KiB | 00m00s [369/667] Installing texlive-refcount-1 100% | 341.0 MiB/s | 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| 0.0 B/s | 15.9 KiB | 00m00s [383/667] Installing texlive-breakurl-1 100% | 0.0 B/s | 17.9 KiB | 00m00s [384/667] Installing texlive-tabulary-1 100% | 0.0 B/s | 23.1 KiB | 00m00s [385/667] Installing texlive-fncychap-1 100% | 0.0 B/s | 38.4 KiB | 00m00s [386/667] Installing texlive-logreq-11: 100% | 0.0 B/s | 27.2 KiB | 00m00s [387/667] Installing texlive-dvips-11:s 100% | 229.8 MiB/s | 1.6 MiB | 00m00s [388/667] Installing texlive-memoir-11: 100% | 472.3 MiB/s | 483.6 KiB | 00m00s [389/667] Installing texlive-hopatch-11 100% | 169.5 MiB/s | 347.2 KiB | 00m00s [390/667] Installing texlive-tex-gyre-1 100% | 329.6 MiB/s | 24.4 MiB | 00m00s [391/667] Installing texlive-everyshi-1 100% | 0.0 B/s | 158.9 KiB | 00m00s [392/667] Installing texlive-xetexconfi 100% | 0.0 B/s | 776.0 B | 00m00s [393/667] Installing texlive-alphalph-1 100% | 368.3 MiB/s | 377.1 KiB | 00m00s [394/667] Installing texlive-enumitem-1 100% | 0.0 B/s | 60.1 KiB | 00m00s [395/667] Installing texlive-underscore 100% | 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urw-base35-z003-fonts-0:20200910-18.fc39 >>> Stop post-transaction scriptlet: urw-base35-z003-fonts-0:20200910-18.fc39.no >>> Running post-transaction scriptlet: fontconfig-0:2.15.0-1.fc40.s390x >>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-1.fc40.s390x >>> Running trigger-install scriptlet: glibc-common-0:2.38.9000-30.fc40.s390x >>> Stop trigger-install scriptlet: glibc-common-0:2.38.9000-30.fc40.s390x >>> Running trigger-install scriptlet: info-0:7.1-1.fc40.s390x >>> Stop trigger-install scriptlet: info-0:7.1-1.fc40.s390x >>> Running trigger-install scriptlet: glib2-0:2.78.3-1.fc40.s390x >>> Stop trigger-install scriptlet: glib2-0:2.78.3-1.fc40.s390x >>> Running trigger-install scriptlet: shared-mime-info-0:2.3-2.fc40.s390x >>> Stop trigger-install scriptlet: shared-mime-info-0:2.3-2.fc40.s390x >>> Running trigger-install scriptlet: gdk-pixbuf2-0:2.42.10-5.fc39.s390x >>> Stop trigger-install scriptlet: gdk-pixbuf2-0:2.42.10-5.fc39.s390x >>> Running trigger-install scriptlet: desktop-file-utils-0:0.26-9.fc39.s390x >>> Stop trigger-install scriptlet: desktop-file-utils-0:0.26-9.fc39.s390x >>> Running trigger-install scriptlet: hicolor-icon-theme-0:0.17-16.fc39.noarch >>> Stop trigger-install scriptlet: hicolor-icon-theme-0:0.17-16.fc39.noarch >>> Running trigger-install scriptlet: texlive-kpathsea-11:svn66209-77.fc39.s390 >>> Stop trigger-install scriptlet: texlive-kpathsea-11:svn66209-77.fc39.s390x >>> Running trigger-install scriptlet: texlive-kpathsea-11:svn66209-77.fc39.s390 >>> Stop trigger-install scriptlet: texlive-kpathsea-11:svn66209-77.fc39.s390x >>> Running trigger-install scriptlet: texlive-kpathsea-11:svn66209-77.fc39.s390 >>> Stop trigger-install scriptlet: texlive-kpathsea-11:svn66209-77.fc39.s390x >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-1.fc40.s390x >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-1.fc40.s390x Warning: skipped PGP checks for 665 package(s). Finish: build setup for snakemake-7.32.4-3.fc40.src.rpm Start: rpmbuild snakemake-7.32.4-3.fc40.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.FjilFB + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf snakemake-7.32.4 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-7.32.4.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd snakemake-7.32.4 + rm -rf /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/snakemake-7.11.0-docs-no-animated-demo.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP . recursedown('.') recursedown('./.github') 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recursedown('./tests/test_same_wildcard/expected-results') recursedown('./tests/test_scatter_gather') recursedown('./tests/test_scatter_gather/expected-results') recursedown('./tests/test_scatter_gather/expected-results/gathered') recursedown('./tests/test_scatter_gather/expected-results/splitted') recursedown('./tests/test_scatter_gather_multiple_processes') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/gathered') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_a') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_b') recursedown('./tests/test_script') recursedown('./tests/test_script/envs') recursedown('./tests/test_script/expected-results') recursedown('./tests/test_script/scripts') recursedown('./tests/test_script_py') recursedown('./tests/test_script_py/expected-results') recursedown('./tests/test_script_py/scripts') recursedown('./tests/test_service_jobs') recursedown('./tests/test_service_jobs/expected-results') recursedown('./tests/test_set_resources') recursedown('./tests/test_set_resources/expected-results') recursedown('./tests/test_shadow') recursedown('./tests/test_shadow/expected-results') recursedown('./tests/test_shadow_copy') recursedown('./tests/test_shadow_copy/expected-results') recursedown('./tests/test_shadow_prefix') recursedown('./tests/test_shadow_prefix/expected-results') recursedown('./tests/test_shadowed_log') recursedown('./tests/test_shadowed_log/expected-results') recursedown('./tests/test_shell') recursedown('./tests/test_shell/expected-results') recursedown('./tests/test_singularity') recursedown('./tests/test_singularity/expected-results') recursedown('./tests/test_singularity_conda') recursedown('./tests/test_singularity_conda/expected-results') recursedown('./tests/test_singularity_global') recursedown('./tests/test_singularity_global/expected-results') recursedown('./tests/test_singularity_module') recursedown('./tests/test_singularity_module/expected-results') recursedown('./tests/test_singularity_none') recursedown('./tests/test_singularity_none/expected-results') recursedown('./tests/test_slurm_mpi') recursedown('./tests/test_slurm_mpi/envs') recursedown('./tests/test_slurm_mpi/expected-results') recursedown('./tests/test_solver') recursedown('./tests/test_solver/expected-results') recursedown('./tests/test_source_path') recursedown('./tests/test_source_path/expected-results') recursedown('./tests/test_source_path/workflow') recursedown('./tests/test_source_path/workflow/resources') recursedown('./tests/test_spaces_in_fnames') recursedown('./tests/test_spaces_in_fnames/expected-results') recursedown('./tests/test_speed') recursedown('./tests/test_srcdir') recursedown('./tests/test_srcdir/expected-results') recursedown('./tests/test_static_remote') recursedown('./tests/test_static_remote/expected-results') recursedown('./tests/test_strict_mode') recursedown('./tests/test_strict_mode/expected-results') recursedown('./tests/test_string_resources') recursedown('./tests/test_string_resources/expected-results') recursedown('./tests/test_subworkflow_config') recursedown('./tests/test_subworkflow_config/expected-results') recursedown('./tests/test_subworkflows') recursedown('./tests/test_subworkflows/expected-results') recursedown('./tests/test_symlink_temp') recursedown('./tests/test_symlink_temp/expected-results') recursedown('./tests/test_symlink_time_handling') recursedown('./tests/test_symlink_time_handling/expected-results') recursedown('./tests/test_temp') recursedown('./tests/test_temp/expected-results') recursedown('./tests/test_temp_expand') recursedown('./tests/test_temp_expand/expected-results') recursedown('./tests/test_template_engine') recursedown('./tests/test_template_engine/expected-results') recursedown('./tests/test_tes') recursedown('./tests/test_tes/expected-results') recursedown('./tests/test_threads') recursedown('./tests/test_threads/expected-results') recursedown('./tests/test_threads0') recursedown('./tests/test_threads0/expected-results') recursedown('./tests/test_tibanna') recursedown('./tests/test_tibanna/expected-results') recursedown('./tests/test_tibanna/scripts') recursedown('./tests/test_tmpdir') recursedown('./tests/test_tmpdir/expected-results') recursedown('./tests/test_touch') recursedown('./tests/test_touch/expected-results') recursedown('./tests/test_touch_pipeline_with_temp_dir') recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results') recursedown('./tests/test_touch_remote_prefix') recursedown('./tests/test_touch_remote_prefix/expected-results') recursedown('./tests/test_touch_with_directories') recursedown('./tests/test_touch_with_directories/expected-results') recursedown('./tests/test_unpack_dict') recursedown('./tests/test_unpack_dict/expected-results') recursedown('./tests/test_unpack_list') recursedown('./tests/test_unpack_list/expected-results') recursedown('./tests/test_until') recursedown('./tests/test_until/expected-results') recursedown('./tests/test_update_config') recursedown('./tests/test_update_config/expected-results') recursedown('./tests/test_url_include') recursedown('./tests/test_url_include/expected-results') recursedown('./tests/test_use_rule_same_module') recursedown('./tests/test_use_rule_same_module/expected-results') recursedown('./tests/test_validate') recursedown('./tests/test_validate/expected-results') recursedown('./tests/test_wildcard_count_ambiguity') recursedown('./tests/test_wildcard_count_ambiguity/expected-results') recursedown('./tests/test_wildcard_keyword') recursedown('./tests/test_wildcard_keyword/expected-results') recursedown('./tests/test_workflow_profile') recursedown('./tests/test_workflow_profile/dummy-general-profile') recursedown('./tests/test_workflow_profile/expected-results') recursedown('./tests/test_workflow_profile/workflow') recursedown('./tests/test_workflow_profile/workflow/profiles') recursedown('./tests/test_workflow_profile/workflow/profiles/default') recursedown('./tests/test_wrapper') recursedown('./tests/test_wrapper/expected-results') recursedown('./tests/test_xrootd') recursedown('./tests/test_yaml_config') recursedown('./tests/test_yaml_config/expected-results') + sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py + sed -r -i 's@"python"@"/usr/bin/python3"@g' tests/test_linting.py + sed -r -i /sphinxcontrib-napoleon/d docs/requirements.txt + echo 'latex_engine = '\''xelatex'\''' + for editor in nano vim + cp -vp misc/nano/README.md README-nano.md + for editor in nano vim + cp -vp misc/vim/README.md README-vim.md + RPM_EC=0 ++ jobs -p 'misc/nano/README.md' -> 'README-nano.md' 'misc/vim/README.md' -> 'README-vim.md' Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.OAETvN + exit 0 + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement not satisfied: sphinx-argparse Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement not satisfied: sphinx_rtd_theme Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement not satisfied: myst-parser Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement not satisfied: appdirs Exiting dependency generation pass: all requirements files + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 20.9 KiB/s | 5.0 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 152.7 KiB/s | 4.1 KiB | 00m00s Copr repository 100% | 5.4 KiB/s | 2.2 KiB | 00m00s Repositories loaded. Package "librsvg2-tools-2.57.1-1.fc40.s390x" is already installed. Package "texlive-xindy-11:svn65958-77.fc39.s390x" is already installed. Package "help2man-1.49.3-3.fc39.noarch" is already installed. Package "latexmk-4.82-1.fc40.noarch" is already installed. Package "make-1:4.4.1-2.fc39.s390x" is already installed. Package "pyproject-rpm-macros-1.11.0-1.fc40.noarch" is already installed. Package "python3-devel-3.12.1-2.fc40.s390x" is already installed. Package "python3-sphinx-latex-1:7.2.6-4.fc40.noarch" is already installed. Package "python3-boto3-1.34.12-1.fc40.noarch" is already installed. Package "python3-configargparse-1.7-1.fc40.noarch" is already installed. Package "python3-docutils-0.20.1-1.fc40.noarch" is already installed. Package "python3-packaging-23.2-2.fc40.noarch" is already installed. Package "python3-pandas-1.5.3-7.fc39~bootstrap.s390x" is already installed. Package "python3-pytest-7.4.3-1.fc40.noarch" is already installed. Package "python3-requests-mock-1.10.0-5.fc39.noarch" is already installed. Package "python3-sphinx-1:7.2.6-4.fc40.noarch" is already installed. Package "texlive-xetex-11:svn66203-77.fc39.s390x" is already installed. Package "vim-filesystem-2:9.0.2190-1.fc40.noarch" is already installed. Package Arch Version Repository Size Installing: python3-appdirs noarch 1.4.4-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.9 KiB python3-myst-parser noarch 2.0.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 707.2 KiB python3-pip noarch 23.3.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.2 MiB python3-sphinx-argparse noarch 0.4.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 110.1 KiB python3-sphinx_rtd_theme noarch 2.0.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 317.9 KiB Installing dependencies: fontawesome4-fonts noarch 1:4.7.0-19.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 296.6 KiB google-roboto-slab-fonts noarch 1.100263-0.21.20150923git.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 699.2 KiB lato-fonts noarch 2.015-17.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.3 MiB libyaml s390x 0.2.5-12.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 131.0 KiB python3-markdown-it-py noarch 3.0.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 496.2 KiB python3-mdit-py-plugins noarch 0.4.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 281.9 KiB python3-mdurl noarch 0.1.2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.8 KiB python3-pyyaml s390x 6.0.1-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 786.9 KiB python3-sphinxcontrib-jquery noarch 4.1-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 381.8 KiB Transaction Summary: Installing: 14 packages Total size of inbound packages is 7 MiB. Need to download 7 MiB. After this operation 30 MiB will be used (install 30 MiB, remove 0 B). [ 1/14] python3-appdirs-0:1.4.4-11.fc39 100% | 695.1 KiB/s | 22.9 KiB | 00m00s [ 2/14] python3-pip-0:23.3.1-2.fc40.noa 100% | 70.9 MiB/s | 2.9 MiB | 00m00s [ 3/14] python3-sphinx-argparse-0:0.4.0 100% | 5.4 MiB/s | 38.9 KiB | 00m00s [ 4/14] python3-sphinx_rtd_theme-0:2.0. 100% | 18.0 MiB/s | 73.7 KiB | 00m00s [ 5/14] python3-myst-parser-0:2.0.0-3.f 100% | 3.9 MiB/s | 184.5 KiB | 00m00s [ 6/14] fontawesome4-fonts-1:4.7.0-19.f 100% | 28.5 MiB/s | 204.2 KiB | 00m00s [ 7/14] google-roboto-slab-fonts-0:1.10 100% | 46.6 MiB/s | 238.8 KiB | 00m00s [ 8/14] python3-sphinxcontrib-jquery-0: 100% | 22.1 MiB/s | 113.4 KiB | 00m00s [ 9/14] python3-markdown-it-py-0:3.0.0- 100% | 40.2 MiB/s | 164.5 KiB | 00m00s [10/14] python3-mdit-py-plugins-0:0.4.0 100% | 24.5 MiB/s | 100.5 KiB | 00m00s [11/14] python3-pyyaml-0:6.0.1-11.fc39. 100% | 43.1 MiB/s | 220.8 KiB | 00m00s [12/14] python3-mdurl-0:0.1.2-4.fc39.no 100% | 8.4 MiB/s | 25.7 KiB | 00m00s [13/14] libyaml-0:0.2.5-12.fc39.s390x 100% | 20.2 MiB/s | 61.9 KiB | 00m00s [14/14] lato-fonts-0:2.015-17.fc39.noar 100% | 41.4 MiB/s | 3.1 MiB | 00m00s -------------------------------------------------------------------------------- [14/14] Total 100% | 60.9 MiB/s | 7.4 MiB | 00m00s Running transaction [ 1/16] Verify package files 100% | 583.0 B/s | 14.0 B | 00m00s [ 2/16] Prepare transaction 100% | 164.0 B/s | 14.0 B | 00m00s [ 3/16] Installing libyaml-0:0.2.5-12.f 100% | 129.2 MiB/s | 132.3 KiB | 00m00s [ 4/16] Installing python3-pyyaml-0:6.0 100% | 195.5 MiB/s | 800.7 KiB | 00m00s [ 5/16] Installing python3-mdurl-0:0.1. 100% | 45.0 MiB/s | 46.1 KiB | 00m00s [ 6/16] Installing python3-markdown-it- 100% | 87.9 MiB/s | 540.1 KiB | 00m00s [ 7/16] Installing python3-mdit-py-plug 100% | 60.6 MiB/s | 310.4 KiB | 00m00s [ 8/16] Installing python3-sphinxcontri 100% | 188.0 MiB/s | 385.0 KiB | 00m00s [ 9/16] Installing lato-fonts-0:2.015-1 100% | 306.3 MiB/s | 11.3 MiB | 00m00s [10/16] Installing google-roboto-slab-f 100% | 342.3 MiB/s | 701.0 KiB | 00m00s [11/16] Installing fontawesome4-fonts-1 100% | 145.4 MiB/s | 297.8 KiB | 00m00s [12/16] Installing python3-sphinx_rtd_t 100% | 66.1 MiB/s | 338.4 KiB | 00m00s [13/16] Installing python3-myst-parser- 100% | 142.2 MiB/s | 728.1 KiB | 00m00s [14/16] Installing python3-sphinx-argpa 100% | 27.9 MiB/s | 114.2 KiB | 00m00s [15/16] Installing python3-pip-0:23.3.1 100% | 216.6 MiB/s | 14.5 MiB | 00m00s [16/16] Installing python3-appdirs-0:1. 100% | 856.0 KiB/s | 71.1 KiB | 00m00s >>> Running trigger-install scriptlet: glibc-common-0:2.38.9000-30.fc40.s390x >>> Stop trigger-install scriptlet: glibc-common-0:2.38.9000-30.fc40.s390x >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-1.fc40.s390x >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-1.fc40.s390x Warning: skipped PGP checks for 14 package(s). Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.mQjwxm + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement not satisfied: wheel Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 28.3 KiB/s | 2.2 KiB | 00m00s fedora 100% | 52.7 KiB/s | 5.0 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 152.7 KiB/s | 4.1 KiB | 00m00s Repositories loaded. Package "librsvg2-tools-2.57.1-1.fc40.s390x" is already installed. Package "texlive-xindy-11:svn65958-77.fc39.s390x" is already installed. Package "help2man-1.49.3-3.fc39.noarch" is already installed. Package "latexmk-4.82-1.fc40.noarch" is already installed. Package "make-1:4.4.1-2.fc39.s390x" is already installed. Package "pyproject-rpm-macros-1.11.0-1.fc40.noarch" is already installed. Package "python3-devel-3.12.1-2.fc40.s390x" is already installed. Package "python3-sphinx-latex-1:7.2.6-4.fc40.noarch" is already installed. Package "python3-appdirs-1.4.4-11.fc39.noarch" is already installed. Package "python3-boto3-1.34.12-1.fc40.noarch" is already installed. Package "python3-configargparse-1.7-1.fc40.noarch" is already installed. Package "python3-docutils-0.20.1-1.fc40.noarch" is already installed. Package "python3-myst-parser-2.0.0-3.fc40.noarch" is already installed. Package "python3-packaging-23.2-2.fc40.noarch" is already installed. Package "python3-pandas-1.5.3-7.fc39~bootstrap.s390x" is already installed. Package "python3-pip-23.3.1-2.fc40.noarch" is already installed. Package "python3-pytest-7.4.3-1.fc40.noarch" is already installed. Package "python3-requests-mock-1.10.0-5.fc39.noarch" is already installed. Package "python3-setuptools-68.2.2-1.fc40.noarch" is already installed. Package "python3-sphinx-1:7.2.6-4.fc40.noarch" is already installed. Package "python3-sphinx-argparse-0.4.0-4.fc39.noarch" is already installed. Package "python3-sphinx_rtd_theme-2.0.0-1.fc40.noarch" is already installed. Package "texlive-xetex-11:svn66203-77.fc39.s390x" is already installed. Package "vim-filesystem-2:9.0.2190-1.fc40.noarch" is already installed. Package Arch Version Repository Size Installing: python3-wheel noarch 1:0.41.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 507.1 KiB Transaction Summary: Installing: 1 packages Total size of inbound packages is 148 KiB. Need to download 148 KiB. After this operation 507 KiB will be used (install 507 KiB, remove 0 B). [1/1] python3-wheel-1:0.41.2-1.fc40.noa 100% | 4.4 MiB/s | 147.5 KiB | 00m00s -------------------------------------------------------------------------------- [1/1] Total 100% | 4.2 MiB/s | 147.5 KiB | 00m00s Running transaction [1/3] Verify package files 100% | 0.0 B/s | 1.0 B | 00m00s [2/3] Prepare transaction 100% | 17.0 B/s | 1.0 B | 00m00s [3/3] Installing python3-wheel-1:0.41.2 100% | 5.0 MiB/s | 526.1 KiB | 00m00s >>> Running trigger-install scriptlet: glibc-common-0:2.38.9000-30.fc40.s390x >>> Stop trigger-install scriptlet: glibc-common-0:2.38.9000-30.fc40.s390x Warning: skipped PGP checks for 1 package(s). Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.cfaCVg + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: connection-pool >=0.0.3 Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: datrie Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: gitpython Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: humanfriendly Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: jsonschema Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: nbformat Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: psutil Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pulp >=2.0 Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: reretry Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: smart-open >=3.0 Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: stopit Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: tabulate Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: throttler Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: toposort >=1.10 Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: wrapt Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: yte <2.0,>=1.5.1 Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-storage-blob ; extra == 'azure' Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-batch ; extra == 'azure' Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-core ; extra == 'azure' Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-identity ; extra == 'azure' Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-mgmt-batch ; extra == 'azure' Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-api-python-client ; extra == 'google-cloud' Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-cloud-storage ; extra == 'google-cloud' Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-crc32c ; extra == 'google-cloud' Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: oauth2client ; extra == 'google-cloud' Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: slacker ; extra == 'messaging' Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 420.0 B/s | 4.1 KiB | 00m10s fedora 100% | 55.1 KiB/s | 5.0 KiB | 00m00s Copr repository 100% | 6.3 KiB/s | 2.2 KiB | 00m00s Repositories loaded. Package "librsvg2-tools-2.57.1-1.fc40.s390x" is already installed. Package "texlive-xindy-11:svn65958-77.fc39.s390x" is already installed. Package "help2man-1.49.3-3.fc39.noarch" is already installed. Package "latexmk-4.82-1.fc40.noarch" is already installed. Package "make-1:4.4.1-2.fc39.s390x" is already installed. Package "pyproject-rpm-macros-1.11.0-1.fc40.noarch" is already installed. Package "python3-devel-3.12.1-2.fc40.s390x" is already installed. Package "python3-sphinx-latex-1:7.2.6-4.fc40.noarch" is already installed. Package "python3-appdirs-1.4.4-11.fc39.noarch" is already installed. Package "python3-boto3-1.34.12-1.fc40.noarch" is already installed. Package "python3-configargparse-1.7-1.fc40.noarch" is already installed. Package "python3-docutils-0.20.1-1.fc40.noarch" is already installed. Package "python3-myst-parser-2.0.0-3.fc40.noarch" is already installed. Package "python3-packaging-23.2-2.fc40.noarch" is already installed. Package "python3-pandas-1.5.3-7.fc39~bootstrap.s390x" is already installed. Package "python3-pip-23.3.1-2.fc40.noarch" is already installed. Package "python3-pygments-2.17.2-1.fc40.noarch" is already installed. Package "python3-pytest-7.4.3-1.fc40.noarch" is already installed. Package "python3-pyyaml-6.0.1-11.fc39.s390x" is already installed. Package "python3-requests-2.28.2-7.fc40.noarch" is already installed. Package "python3-requests-mock-1.10.0-5.fc39.noarch" is already installed. Package "python3-setuptools-68.2.2-1.fc40.noarch" is already installed. Package "python3-sphinx-1:7.2.6-4.fc40.noarch" is already installed. Package "python3-sphinx-argparse-0.4.0-4.fc39.noarch" is already installed. Package "python3-sphinx_rtd_theme-2.0.0-1.fc40.noarch" is already installed.Package Arch Version Repository Size Installing: python3-GitPython noarch 3.1.40-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB python3-azure-batch noarch 14.0.0-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB python3-azure-core noarch 2:1.28.0-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB python3-azure-identity noarch 1:1.14.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 916.2 KiB python3-azure-mgmt-batch noarch 17.0.0-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB python3-azure-storage-blob noarch 12.14.1-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.1 MiB python3-connection_pool noarch 0.0.3-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.1 KiB python3-datrie s390x 0.8.2-22.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 480.5 KiB python3-google-api-client noarch 2:2.112.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 91.3 MiB python3-google-cloud-storage noarch 2.14.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python3-google-crc32c s390x 1.1.2-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 71.7 KiB python3-humanfriendly noarch 10.0-8.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 549.1 KiB python3-jsonschema noarch 4.19.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 851.4 KiB python3-nbformat noarch 5.9.1-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 548.1 KiB python3-oauth2client noarch 4.1.3-23.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 689.1 KiB python3-psutil s390x 5.9.5-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB python3-pulp noarch 2.7.0-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 887.2 KiB python3-reretry noarch 0.11.8-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 32.1 KiB python3-slacker noarch 0.14.0-12.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 160.2 KiB python3-smart_open noarch 6.4.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 459.0 KiB python3-stopit noarch 1.1.2-8.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65.1 KiB python3-tabulate noarch 0.9.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 340.4 KiB python3-throttler noarch 1.2.2-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 33.5 KiB python3-toposort noarch 1.10-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.5 KiB python3-wrapt s390x 1.16.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 207.7 KiB python3-yte noarch 1.5.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 60.5 KiB Installing dependencies: abseil-cpp s390x 20230802.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB c-ares s390x 1.22.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 382.1 KiB git-core s390x 2.43.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.3 MiB google-crc32c s390x 1.1.2-7.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.7 KiB grpc-data noarch 1.48.4-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 29.6 KiB less s390x 643-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 423.9 KiB libcbor s390x 0.10.2-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.8 KiB libedit s390x 3.1-48.20230828cvs.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 275.7 KiB libfido2 s390x 1.14.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 237.8 KiB openssh s390x 9.3p1-13.fc40.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB openssh-clients s390x 9.3p1-13.fc40.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.7 MiB protobuf s390x 3.19.6-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 MiB python3-adal noarch 1.2.7-13.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 322.2 KiB python3-attrs noarch 23.1.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 379.0 KiB python3-azure-common noarch 1:1.1.28-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 79.8 KiB python3-azure-mgmt-core noarch 1:1.3.2-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 95.6 KiB python3-boto noarch 2.49.0-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.8 MiB python3-cachetools noarch 5.3.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142.0 KiB python3-certifi noarch 2023.05.07-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.6 KiB python3-cffi s390x 1.16.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 MiB python3-cryptography s390x 41.0.5-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.1 MiB python3-dpath noarch 2.1.4-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 92.3 KiB python3-fasteners noarch 0.19-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 116.3 KiB python3-fastjsonschema noarch 2.18.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 188.3 KiB python3-gitdb noarch 4.0.10-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 503.1 KiB python3-google-api-core noarch 1:2.11.1-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 809.0 KiB python3-google-auth noarch 1:2.26.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python3-google-auth-httplib2 noarch 0.2.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 46.4 KiB python3-google-cloud-core noarch 2.3.3-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 182.3 KiB python3-google-resumable-media noarch 2.6.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 670.8 KiB python3-googleapis-common-protos noarch 1.62.0-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 775.7 KiB python3-grpcio s390x 1.48.4-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 MiB python3-grpcio-status noarch 1.48.4-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.1 KiB python3-httplib2 noarch 0.21.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 342.3 KiB python3-isodate noarch 0.6.1-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 236.1 KiB python3-jsonschema-specifications noarch 2023.11.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45.8 KiB python3-jupyter-core noarch 5.1.0-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 505.6 KiB python3-jwt noarch 2.6.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141.9 KiB python3-jwt+crypto noarch 2.6.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.3 KiB python3-msal noarch 1.26.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 786.0 KiB python3-msal-extensions noarch 1.0.0-7.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 110.1 KiB python3-msrest noarch 0.7.1-8.20221014git2d8fd04.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 548.4 KiB python3-msrestazure noarch 0.6.4-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 265.0 KiB python3-oauthlib noarch 3.2.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB python3-plac noarch 1.4.2-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 226.6 KiB python3-platformdirs noarch 3.11.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 162.4 KiB python3-ply noarch 3.11-20.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 561.0 KiB python3-portalocker noarch 2.8.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 132.0 KiB python3-protobuf s390x 3.19.6-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB python3-pyOpenSSL noarch 23.2.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 646.7 KiB python3-pyasn1 noarch 0.5.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 881.5 KiB python3-pyasn1-modules noarch 0.5.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB python3-pycparser noarch 2.20-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 839.3 KiB python3-pyparsing noarch 3.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB python3-referencing noarch 0.31.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 313.3 KiB python3-requests-oauthlib noarch 1.3.1-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134.6 KiB python3-rpds-py s390x 0.16.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 913.9 KiB python3-rsa noarch 4.9-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 240.6 KiB python3-smmap noarch 5.0.0-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 198.2 KiB python3-traitlets noarch 5.11.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 929.3 KiB python3-typing-extensions noarch 4.9.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 391.0 KiB python3-uritemplate noarch 4.1.1-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB python3-zombie-imp noarch 0.0.2-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58.0 KiB re2 s390x 1:20220601-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 486.1 KiB Transaction Summary: Installing: 90 packages Total size of inbound packages is 27 MiB. Need to download 27 MiB. After this operation 191 MiB will be used (install 191 MiB, remove 0 B). Package "python3-wheel-1:0.41.2-1.fc40.noarch" is already installed. Package "texlive-xetex-11:svn66203-77.fc39.s390x" is already installed. Package "vim-filesystem-2:9.0.2190-1.fc40.noarch" is already installed. 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| 00m00s [73/92] Installing python3-google-api-c 100% | 575.1 MiB/s | 91.4 MiB | 00m00s [74/92] Installing python3-google-cloud 100% | 309.9 MiB/s | 1.2 MiB | 00m00s [75/92] Installing python3-smart_open-0 100% | 153.4 MiB/s | 471.3 KiB | 00m00s [76/92] Installing python3-azure-mgmt-b 100% | 276.5 MiB/s | 1.9 MiB | 00m00s [77/92] Installing python3-azure-batch- 100% | 329.0 MiB/s | 3.0 MiB | 00m00s [78/92] Installing python3-azure-storag 100% | 305.8 MiB/s | 5.2 MiB | 00m00s [79/92] Installing python3-azure-identi 100% | 118.6 MiB/s | 971.7 KiB | 00m00s [80/92] Installing python3-GitPython-0: 100% | 216.8 MiB/s | 1.7 MiB | 00m00s [81/92] Installing python3-wrapt-0:1.16 100% | 104.7 MiB/s | 214.5 KiB | 00m00s [82/92] Installing python3-toposort-0:1 100% | 30.1 MiB/s | 30.8 KiB | 00m00s [83/92] Installing python3-throttler-0: 100% | 38.6 MiB/s | 39.6 KiB | 00m00s [84/92] Installing python3-tabulate-0:0 100% | 167.9 MiB/s | 343.8 KiB | 00m00s [85/92] Installing python3-stopit-0:1.1 100% | 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Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.mfb59V + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.1) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.5) Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp >=2.0 (installed: pulp 2.7.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open >=3.0 (installed: smart-open 6.4.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort >=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-storage-blob ; extra == 'azure' (installed: azure-storage-blob 12.14.1) Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-batch ; extra == 'azure' (installed: azure-batch 14.0.0) Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-core ; extra == 'azure' (installed: azure-core 1.28.0) Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-identity ; extra == 'azure' (installed: azure-identity 1.14.0) Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-mgmt-batch ; extra == 'azure' (installed: azure-mgmt-batch 17.0.0) Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-api-python-client ; extra == 'google-cloud' (installed: google-api-python-client 2.112.0) Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-cloud-storage ; extra == 'google-cloud' (installed: google-cloud-storage 2.14.0) Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-crc32c ; extra == 'google-cloud' (installed: google-crc32c 1.1.2) Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: oauth2client ; extra == 'google-cloud' (installed: oauth2client 4.1.3) Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slacker ; extra == 'messaging' (installed: slacker 0.14.0) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 20.7 KiB/s | 5.0 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 133.0 KiB/s | 4.1 KiB | 00m00s Copr repository 100% | 5.4 KiB/s | 2.2 KiB | 00m00s Repositories loaded. Package "librsvg2-tools-2.57.1-1.fc40.s390x" is already installed. Package "texlive-xindy-11:svn65958-77.fc39.s390x" is already installed. Package "help2man-1.49.3-3.fc39.noarch" is already installed. Package "latexmk-4.82-1.fc40.noarch" is already installed. Package "make-1:4.4.1-2.fc39.s390x" is already installed. Package "pyproject-rpm-macros-1.11.0-1.fc40.noarch" is already installed. Package "python3-devel-3.12.1-2.fc40.s390x" is already installed. Package "python3-sphinx-latex-1:7.2.6-4.fc40.noarch" is already installed. Package "python3-appdirs-1.4.4-11.fc39.noarch" is already installed. Package "python3-azure-batch-14.0.0-1.fc39.noarch" is already installed. Package "python3-azure-core-2:1.28.0-3.fc39.noarch" is already installed. Package "python3-azure-identity-1:1.14.0-1.fc40.noarch" is already installed. Package "python3-azure-mgmt-batch-17.0.0-5.fc39.noarch" is already installed. Package "python3-azure-storage-blob-12.14.1-4.fc39.noarch" is already installed. Package "python3-boto3-1.34.12-1.fc40.noarch" is already installed. Package "python3-configargparse-1.7-1.fc40.noarch" is already installed. Package "python3-connection_pool-0.0.3-9.fc39.noarch" is already installed. Package "python3-datrie-0.8.2-22.fc40.s390x" is already installed. Package "python3-docutils-0.20.1-1.fc40.noarch" is already installed. Package "python3-GitPython-3.1.40-1.fc40.noarch" is already installed. Package "python3-google-api-client-2:2.112.0-1.fc40.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-2.fc40.noarch" is already installed. Package "python3-google-crc32c-1.1.2-9.fc39.s390x" is already installed. Package "python3-humanfriendly-10.0-8.fc39.noarch" is already installed. Package "python3-jsonschema-4.19.1-1.fc40.noarch" is already installed. Package "python3-myst-parser-2.0.0-3.fc40.noarch" is already installed. Package "python3-nbformat-5.9.1-2.fc39.noarch" is already installed. Package "python3-oauth2client-4.1.3-23.fc39.noarch" is already installed. Package "python3-packaging-23.2-2.fc40.noarch" is already installed. Package "python3-pandas-1.5.3-7.fc39~bootstrap.s390x" is already installed. Package "python3-pip-23.3.1-2.fc40.noarch" is already installed. Package "python3-psutil-5.9.5-2.fc40.s390x" is already installed. Package "python3-pulp-2.7.0-3.fc39.noarch" is already installed. Package "python3-pygments-2.17.2-1.fc40.noarch" is already installed. Package "python3-pytest-7.4.3-1.fc40.noarch" is already installed. Package "python3-pyyaml-6.0.1-11.fc39.s390x" is already installed. Package "python3-requests-2.28.2-7.fc40.noarch" is already installed. Package "python3-requests-mock-1.10.0-5.fc39.noarch" is already installed. Package "python3-reretry-0.11.8-6.fc40.noarch" is already installed. Package "python3-setuptools-68.2.2-1.fc40.noarch" is already installed. Package "python3-slacker-0.14.0-12.fc39.noarch" is already installed. Package "python3-smart_open-6.4.0-1.fc40.noarch" is already installed. Package "python3-sphinx-1:7.2.6-4.fc40.noarch" is already installed. Package "python3-sphinx-argparse-0.4.0-4.fc39.noarch" is already installed. Package "python3-sphinx_rtd_theme-2.0.0-1.fc40.noarch" is already installed. Package "python3-stopit-1.1.2-8.fc39.noarch" is already installed. Package "python3-tabulate-0.9.0-4.fc39.noarch" is already installed. Package "python3-throttler-1.2.2-7.fc40.noarch" is already installed. Package "python3-toposort-1.10-8.fc40.noarch" is already installed. Package "python3-wheel-1:0.41.2-1.fc40.noarch" is already installed. Package "python3-wrapt-1.16.0-1.fc40.s390x" is already installed. Package "texlive-xetex-11:svn66203-77.fc39.s390x" is already installed. Package "vim-filesystem-2:9.0.2190-1.fc40.noarch" is already installed. Nothing to do. Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.wC1Ba8 + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.1) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.5) Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp >=2.0 (installed: pulp 2.7.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open >=3.0 (installed: smart-open 6.4.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort >=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-storage-blob ; extra == 'azure' (installed: azure-storage-blob 12.14.1) Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-batch ; extra == 'azure' (installed: azure-batch 14.0.0) Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-core ; extra == 'azure' (installed: azure-core 1.28.0) Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-identity ; extra == 'azure' (installed: azure-identity 1.14.0) Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-mgmt-batch ; extra == 'azure' (installed: azure-mgmt-batch 17.0.0) Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-api-python-client ; extra == 'google-cloud' (installed: google-api-python-client 2.112.0) Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-cloud-storage ; extra == 'google-cloud' (installed: google-cloud-storage 2.14.0) Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-crc32c ; extra == 'google-cloud' (installed: google-crc32c 1.1.2) Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: oauth2client ; extra == 'google-cloud' (installed: oauth2client 4.1.3) Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slacker ; extra == 'messaging' (installed: slacker 0.14.0) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.BEAz3S + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir Processing /builddir/build/BUILD/snakemake-7.32.4 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info writing /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-22eb6cv7/snakemake-7.32.4.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: snakemake Building wheel for snakemake (pyproject.toml): started Running command Building wheel for snakemake (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/stats.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/script.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/profiles.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/interfaces.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report creating build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote creating build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting creating build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors copying snakemake/executors/google_lifesciences.py -> build/lib/snakemake/executors copying snakemake/executors/ga4gh_tes.py -> build/lib/snakemake/executors copying snakemake/executors/flux.py -> build/lib/snakemake/executors copying snakemake/executors/common.py -> build/lib/snakemake/executors copying snakemake/executors/azure_batch.py -> build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors creating build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment creating build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common creating build/lib/snakemake/caching copying snakemake/caching/remote.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates creating build/lib/snakemake/report/template copying snakemake/report/template/__init__.py -> build/lib/snakemake/report/template creating build/lib/snakemake/report/data copying snakemake/report/data/timeline.py -> build/lib/snakemake/report/data copying snakemake/report/data/runtimes.py -> build/lib/snakemake/report/data copying snakemake/report/data/rules.py -> build/lib/snakemake/report/data copying snakemake/report/data/rulegraph.py -> build/lib/snakemake/report/data copying snakemake/report/data/results.py -> build/lib/snakemake/report/data copying snakemake/report/data/packages.py -> build/lib/snakemake/report/data copying snakemake/report/data/common.py -> build/lib/snakemake/report/data copying snakemake/report/data/categories.py -> build/lib/snakemake/report/data copying snakemake/report/data/__init__.py -> build/lib/snakemake/report/data creating build/lib/snakemake/report/template/components copying snakemake/report/template/components/__init__.py -> build/lib/snakemake/report/template/components creating build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/slurm_submit.py -> build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/slurm_jobstep.py -> build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/__init__.py -> build/lib/snakemake/executors/slurm copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/report/template/style.css -> build/lib/snakemake/report/template copying snakemake/report/template/index.html.jinja2 -> build/lib/snakemake/report/template copying snakemake/report/template/logo.svg -> build/lib/snakemake/report/template copying snakemake/report/template/components/subcategory.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/stats.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/search_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_graph.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_view_button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/report_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/navbar.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/menu.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_item.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_heading.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/icon.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/content.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/common.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/category.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/breadcrumbs.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/app.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_menu.js -> build/lib/snakemake/report/template/components UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '7.32.4' installing to build/bdist.linux-s390x/wheel running install running install_lib creating build/bdist.linux-s390x creating build/bdist.linux-s390x/wheel creating build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/_version.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/gui.html -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/report.css -> build/bdist.linux-s390x/wheel/snakemake creating build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/remote.py -> build/bdist.linux-s390x/wheel/snakemake/caching creating build/bdist.linux-s390x/wheel/snakemake/common copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-s390x/wheel/snakemake/common creating build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-s390x/wheel/snakemake/deployment creating build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-s390x/wheel/snakemake/executors creating build/bdist.linux-s390x/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/slurm_jobstep.py -> build/bdist.linux-s390x/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/slurm_submit.py -> build/bdist.linux-s390x/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/azure_batch.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/common.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/flux.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/ga4gh_tes.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-s390x/wheel/snakemake/executors creating build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-s390x/wheel/snakemake/linting creating build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-s390x/wheel/snakemake/remote creating build/bdist.linux-s390x/wheel/snakemake/report creating build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/categories.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/common.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/packages.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/results.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rulegraph.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rules.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/runtimes.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/timeline.py -> build/bdist.linux-s390x/wheel/snakemake/report/data creating build/bdist.linux-s390x/wheel/snakemake/report/template copying build/lib/snakemake/report/template/logo.svg -> build/bdist.linux-s390x/wheel/snakemake/report/template copying build/lib/snakemake/report/template/index.html.jinja2 -> build/bdist.linux-s390x/wheel/snakemake/report/template copying build/lib/snakemake/report/template/style.css -> build/bdist.linux-s390x/wheel/snakemake/report/template creating build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_menu.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_results.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/app.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/breadcrumbs.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/button.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/category.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/common.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/content.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/icon.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_heading.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_item.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/menu.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/navbar.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/report_info.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_info.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_view_button.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_graph.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_info.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/search_results.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/stats.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/subcategory.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/report/template copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/report copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-s390x/wheel/snakemake/report creating build/bdist.linux-s390x/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-s390x/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-s390x/wheel/snakemake/template_rendering creating build/bdist.linux-s390x/wheel/snakemake/unit_tests creating build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/unit_tests copying build/lib/snakemake/__init__.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/__main__.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/exceptions.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/interfaces.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/io.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/profiles.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/script.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/stats.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/wrapper.py -> build/bdist.linux-s390x/wheel/snakemake running install_egg_info running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to build/bdist.linux-s390x/wheel/snakemake-7.32.4-py3.12.egg-info running install_scripts creating build/bdist.linux-s390x/wheel/snakemake-7.32.4.dist-info/WHEEL creating '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-wheel-0tnr_53q/.tmp-4_kqv5y1/snakemake-7.32.4-py3-none-any.whl' and adding 'build/bdist.linux-s390x/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.html' adding 'snakemake/gui.py' adding 'snakemake/interfaces.py' adding 'snakemake/io.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/profiles.py' adding 'snakemake/report.css' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/script.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/stats.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/remote.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/azure_batch.py' adding 'snakemake/executors/common.py' adding 'snakemake/executors/flux.py' adding 'snakemake/executors/ga4gh_tes.py' adding 'snakemake/executors/google_lifesciences.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/jobscript.sh' adding 'snakemake/executors/slurm/__init__.py' adding 'snakemake/executors/slurm/slurm_jobstep.py' adding 'snakemake/executors/slurm/slurm_submit.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/data/__init__.py' adding 'snakemake/report/data/categories.py' adding 'snakemake/report/data/common.py' adding 'snakemake/report/data/packages.py' adding 'snakemake/report/data/results.py' adding 'snakemake/report/data/rulegraph.py' adding 'snakemake/report/data/rules.py' adding 'snakemake/report/data/runtimes.py' adding 'snakemake/report/data/timeline.py' adding 'snakemake/report/template/__init__.py' adding 'snakemake/report/template/index.html.jinja2' adding 'snakemake/report/template/logo.svg' adding 'snakemake/report/template/style.css' adding 'snakemake/report/template/components/__init__.py' adding 'snakemake/report/template/components/abstract_menu.js' adding 'snakemake/report/template/components/abstract_results.js' adding 'snakemake/report/template/components/app.js' adding 'snakemake/report/template/components/breadcrumbs.js' adding 'snakemake/report/template/components/button.js' adding 'snakemake/report/template/components/category.js' adding 'snakemake/report/template/components/common.js' adding 'snakemake/report/template/components/content.js' adding 'snakemake/report/template/components/icon.js' adding 'snakemake/report/template/components/list_heading.js' adding 'snakemake/report/template/components/list_item.js' adding 'snakemake/report/template/components/menu.js' adding 'snakemake/report/template/components/navbar.js' adding 'snakemake/report/template/components/report_info.js' adding 'snakemake/report/template/components/result_info.js' adding 'snakemake/report/template/components/result_view_button.js' adding 'snakemake/report/template/components/rule_graph.js' adding 'snakemake/report/template/components/rule_info.js' adding 'snakemake/report/template/components/search_results.js' adding 'snakemake/report/template/components/stats.js' adding 'snakemake/report/template/components/subcategory.js' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-7.32.4.dist-info/AUTHORS.rst' adding 'snakemake-7.32.4.dist-info/LICENSE.md' adding 'snakemake-7.32.4.dist-info/METADATA' adding 'snakemake-7.32.4.dist-info/WHEEL' adding 'snakemake-7.32.4.dist-info/entry_points.txt' adding 'snakemake-7.32.4.dist-info/top_level.txt' adding 'snakemake-7.32.4.dist-info/RECORD' removing build/bdist.linux-s390x/wheel Building wheel for snakemake (pyproject.toml): finished with status 'done' Created wheel for snakemake: filename=snakemake-7.32.4-py3-none-any.whl size=380736 sha256=c9b3e662db07312d0c2217a703c704304f37c2b78544444d87eddb165fc605a7 Stored in directory: /builddir/.cache/pip/wheels/53/8b/cb/3dce719624720fd97280e70d5666cec6215f6d7c6704f015ae Successfully built snakemake + find docs -type f -name '*.svg' + read -r fn ++ dirname docs/executor_tutorial/workflow/quals.svg ++ basename docs/executor_tutorial/workflow/quals.svg .svg + rsvg-convert --format=pdf --output=docs/executor_tutorial/workflow/quals.pdf docs/executor_tutorial/workflow/quals.svg + read -r fn + find docs/executor_tutorial -type f -exec gawk '/\.svg/ { print FILENAME; nextfile }' '{}' + + xargs -r -t sed -r -i 's/(image::.*)\.svg/\1\.pdf/' sed -r -i 's/(image::.*)\.svg/\1\.pdf/' docs/executor_tutorial/google_lifesciences.rst docs/executor_tutorial/azure_batch.rst + PYTHONPATH=/builddir/build/BUILD/snakemake-7.32.4 + /usr/bin/make -O -j2 V=1 VERBOSE=1 -C docs latexpdf 'SPHINXOPTS=-j${RPM_BUILD_NCPUS}' make: Entering directory '/builddir/build/BUILD/snakemake-7.32.4/docs' sphinx-build -b latex -d _build/doctrees -j2 . _build/latex Running Sphinx v7.2.6 making output directory... done myst v2.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [latex]: all documents updating environment: [new config] 38 added, 0 changed, 0 removed reading sources... [100%] snakefiles/remote_files .. tutorial/tutorial looking for now-outdated files... none found pickling environment... done checking consistency... done copying TeX support files... copying TeX support files... done processing Snakemake.tex... index getting_started/installation tutorial/tutorial tutorial/setup tutorial/basics tutorial/advanced tutorial/additional_features tutorial/short executor_tutorial/tutorial executor_tutorial/azure_batch executor_tutorial/azure_aks executor_tutorial/google_lifesciences executor_tutorial/flux snakefiles/best_practices executing/cli executing/cluster executing/cloud executing/grouping executing/caching executing/interoperability executing/monitoring snakefiles/writing_snakefiles snakefiles/rules snakefiles/configuration snakefiles/modularization snakefiles/remote_files snakefiles/utils snakefiles/deployment snakefiles/reporting snakefiles/testing snakefiles/foreign_wms project_info/citations project_info/more_resources project_info/faq project_info/contributing project_info/authors project_info/history project_info/license resolving references... done writing... done copying images... [100%] project_info/img/idea.png build succeeded, 497 warnings. The LaTeX files are in _build/latex. Run 'make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). Running LaTeX files through pdflatex... /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst:174: CRITICAL: Title level inconsistent: Use templating in profiles ~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst:111: WARNING: duplicate label profiles, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:72: WARNING: duplicate label kubernetes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:233: WARNING: duplicate label machine types, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:406: WARNING: duplicate label execution, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:490: WARNING: duplicate label execution, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst:13: WARNING: Title overline too short. -------------- Executing on SLURM clusters -------------- /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst:5: WARNING: duplicate label cluster, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/monitoring.rst:5: WARNING: duplicate label monitoring, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/monitoring.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst:184: ERROR: Unexpected indentation. /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:47: WARNING: Title underline too short. Create an Azure Storage Account and upload example data ::::::::::::::::::::::::::::::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:47: WARNING: Title underline too short. Create an Azure Storage Account and upload example data ::::::::::::::::::::::::::::::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:119: WARNING: Title underline too short. Azure Blob Storage Warning: ::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:119: WARNING: Title underline too short. Azure Blob Storage Warning: ::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:367: WARNING: Title underline too short. Defining a Start Task ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:367: WARNING: Title underline too short. Defining a Start Task ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:386: WARNING: Title underline too short. Autoscaling and Task Distribution ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:386: WARNING: Title underline too short. Autoscaling and Task Distribution ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:28: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:163: WARNING: duplicate label running the workflow, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/flux.rst:13: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/google_lifesciences.rst:13: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/flux.rst /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:688: WARNING: Title underline too short. How can I avoid system /tmp to be used when combining singularity and conda? ------------------------------------------------------ /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:688: WARNING: Title underline too short. 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/builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1362: WARNING: undefined label: 'snakefiles_ensure' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1951: WARNING: undefined label: 'job-grouping' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1951: WARNING: undefined label: 'job-grouping' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/configuration.rst:35: WARNING: undefined label: 'api_reference_snakemake' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/utils.rst:7: WARNING: undefined label: 'utils-api' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/foreign_wms.rst:30: WARNING: undefined label: 'snakefiles-local-rule' WARNING: Could not fetch remote image: https://img.shields.io/badge/Gitpod-ready--to--code-blue?logo=gitpod [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/Gitpod-ready--to--code-blue?logo=gitpod (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/conda/dn/bioconda/snakemake.svg?label=Bioconda [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /conda/dn/bioconda/snakemake.svg?label=Bioconda (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/pypi/pyversions/snakemake.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /pypi/pyversions/snakemake.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/pypi/v/snakemake.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /pypi/v/snakemake.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/github/workflow/status/snakemake/snakemake/Publish%20to%20Docker%20Hub?color=blue&label=docker%20container&branch=main [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /github/workflow/status/snakemake/snakemake/Publish%20to%20Docker%20Hub?color=blue&label=docker%20container&branch=main (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://github.com/snakemake/snakemake/workflows/CI/badge.svg?branch=main&label=tests [HTTPSConnectionPool(host='github.com', port=443): Max retries exceeded with url: /snakemake/snakemake/workflows/CI/badge.svg?branch=main&label=tests (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/badge/stack-overflow-orange.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/stack-overflow-orange.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/twitter/follow/johanneskoester.svg?style=social&label=Follow [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /twitter/follow/johanneskoester.svg?style=social&label=Follow (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/discord/753690260830945390?label=discord%20chat [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /discord/753690260830945390?label=discord%20chat (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/github/stars/snakemake/snakemake?style=social [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /github/stars/snakemake/snakemake?style=social (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/badge/snakemake-≥5.6.0-brightgreen.svg?style=flat [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/snakemake-%E2%89%A55.6.0-brightgreen.svg?style=flat (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:266: WARNING: Lexing literal_block '# required env variables\nexport AZ_BLOB_PREFIX=snakemake-tutorial\nexport AZ_BATCH_ACCOUNT_URL="${batch_account_url}"\nexport AZ_BATCH_ACCOUNT_KEY="${az_batch_account_key}"\nexport AZ_BLOB_ACCOUNT_URL="${storage_account_url_with_sas}"\n\n# optional environment variables with defaults listed\n\n# network and identity\n# export BATCH_POOL_SUBNET_ID=\n# export BATCH_MANAGED_IDENTITY_RESOURCE_ID=\n# export BATCH_MANAGED_IDENTITY_CLIENT_ID=\n\n# if unset, default is "classic"\n# export BATCH_NODE_COMMUNICATION_SIMPLIFIED=true\n\n# don\'t recommend changing\n# export BATCH_POOL_IMAGE_PUBLISHER=microsoft-azure-batch\n# export BATCH_POOL_IMAGE_OFFER=ubuntu-server-container\n# export BATCH_POOL_IMAGE_SKU=20-04-lts\n# export BATCH_POOL_RESOURCE_FILE_PREFIX=resource-files\n\n# export BATCH_POOL_VM_CONTAINER_IMAGE=ubuntu\n# export BATCH_POOL_VM_NODE_AGENT_SKU_ID="batch.node.ubuntu 20.04"\n\n# can be used to add a startup task to the batch nodes formatted as an sas url to a bash script\n# export BATCH_NODE_START_TASK_SAS_URL=\n\n# can be useful to alter task distribution across nodes\n\n# export BATCH_POOL_VM_SIZE=Standard_D2_v3\n# export BATCH_NODE_FILL_TYPE=spread\n# export BATCH_POOL_NODE_COUNT=1\n# export BATCH_TASKS_PER_NODE=1\n\n# container registry configuration to pull container image from custom registry\n# export BATCH_CONTAINER_REGISTRY_URL=\n# export BATCH_CONTAINER_REGISTRY_USER=\n# export BATCH_CONTAINER_REGISTRY_PASS=\n\nsnakemake \\\n --jobs 3 \\\n -rpf --verbose --default-remote-prefix $AZ_BLOB_PREFIX \\\n --use-conda \\\n --default-remote-provider AzBlob \\\n --envvars AZ_BLOB_ACCOUNT_URL \\\n --az-batch \\\n --container-image snakemake/snakemake \\\n --az-batch-account-url $AZ_BATCH_ACCOUNT_URL' as "console" resulted in an error at token: "'". 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[240] [241] [242] [243] [244] Underfull \hbox (badness 10000) in paragraph at lines 16974--16976 []\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i n order to avoid race conditions in [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 10000) in paragraph at lines 19438--19441 []\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\ TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/ [269] [270] [271] [272] [273] [274] [275] [276] [277] [278] Underfull \hbox (badness 10000) in paragraph at lines 20504--20510 []\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/ FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1 0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use [279] [280] [281] No file Snakemake.ind. Package sphinx Warning: The package pict2e is required for rounded boxes. (sphinx) As it does not seem to be available on your system, (sphinx) options setting radii have all been ignored. Package sphinx Warning: The package ellipse is required for elliptical corners. (sphinx) As it does not seem to be available on your system, (sphinx) all non-straight corners have used circle arcs.. [282] (./Snakemake.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `Snakemake.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on Snakemake.pdf (286 pages). Transcript written on Snakemake.log. Latexmk: Getting log file 'Snakemake.log' Latexmk: Examining 'Snakemake.fls' Latexmk: Examining 'Snakemake.log' Latexmk: Index file 'Snakemake.idx' was written Latexmk: References changed. Latexmk: References changed. Latexmk: References changed. Latexmk: Log file says output to 'Snakemake.pdf' Latexmk: applying rule 'makeindex Snakemake.idx'... Rule 'makeindex Snakemake.idx': Reasons for rerun Category 'other': Rerun of 'makeindex Snakemake.idx' forced or previously required ------------ Run number 1 of rule 'makeindex Snakemake.idx' ------------ ------------ Running 'internal xindy -L english -C utf8 -M sphinx.xdy -o "Snakemake.ind" "Snakemake.idx"' ------------ Latexmk: calling xindy( -L english -C utf8 -M sphinx.xdy -o "Snakemake.ind" "Snakemake.idx" ) Latexmk: applying rule 'pdflatex'... Rule 'pdflatex': Reasons for rerun Changed files or newly in use/created: Snakemake.aux Snakemake.ind Snakemake.out Snakemake.toc ------------ Run number 2 of rule 'pdflatex' ------------ ------------ Running 'xelatex -recorder "Snakemake.tex"' ------------ This is XeTeX, Version 3.141592653-2.6-0.999995 (TeX Live 2023) (preloaded format=xelatex) restricted \write18 enabled. entering extended mode (./Snakemake.tex LaTeX2e <2022-11-01> patch level 1 L3 programming layer <2023-02-22> (./sphinxmanual.cls Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual) (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2022/07/02 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo))) (/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty Package cmap Warning: pdftex not detected - exiting. ) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec.sty (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-xetex.def))) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec-xetex.sty (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec.cfg))) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. 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[3] [4] Chapter 2. [5] [6] Chapter 3. [7] [8] Chapter 4. [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] Overfull \vbox (1.78299pt too high) detected at line 2638 [43] [44] [45] [46] Overfull \hbox (16.155pt too wide) in paragraph at lines 2923--2925 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_IMAGE_PUBLISHER| Overfull \hbox (40.465pt too wide) in paragraph at lines 2953--2955 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_VM_CONTAINER_IMAGE| Overfull \hbox (52.17499pt too wide) in paragraph at lines 2963--2965 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_VM_NODE_AGENT_SKU_ID| Overfull \hbox (42.36499pt too wide) in paragraph at lines 3003--3005 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_RESOURCE_FILE_PREFIX| Overfull \hbox (34.435pt too wide) in paragraph at lines 3013--3015 []|\TU/FreeSerif(0)/m/n/10 BATCH_NODE_START_TASK_SAS_URL| Overfull \hbox (72.44499pt too wide) in paragraph at lines 3033--3035 []|\TU/FreeSerif(0)/m/n/10 BATCH_NODE_COMMUNICATION_SIMPLIFIED| Overfull \hbox (67.97499pt too wide) in paragraph at lines 3053--3055 []|\TU/FreeSerif(0)/m/n/10 BATCH_MANAGED_IDENTITY_RESOURCE_ID| Overfull \hbox (51.485pt too wide) in paragraph at lines 3063--3065 []|\TU/FreeSerif(0)/m/n/10 BATCH_MANAGED_IDENTITY_CLIENT_ID| Overfull \hbox (28.965pt too wide) in paragraph at lines 3073--3075 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_URL| Overfull \hbox (34.045pt too wide) in paragraph at lines 3083--3085 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_USER| Overfull \hbox (31.625pt too wide) in paragraph at lines 3093--3095 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_PASS| [47] Overfull \vbox (0.72789pt too high) detected at line 3160 [48] Overfull \vbox (1.98596pt too high) detected at line 3201 [49] Underfull \vbox (badness 10000) detected at line 3201 Overfull \vbox (1.98598pt too high) detected at line 3201 [50] Underfull \hbox (badness 10000) in paragraph at lines 3235--3239 \TU/FreeSerif(0)/m/n/10 The azure batch executor supports autoscaling of the ba tch nodes by including the flag [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3376--3388 []\TU/FreeSerif(0)/m/n/10 There is a lot going on here, so let’s unpack it: thi s creates an [][]auto-scaling Kubernetes cluster[][] [53] [54] [55] [56] [57] Overfull \vbox (1.98596pt too high) detected at line 3840 [58] [59] [60] Underfull \vbox (badness 10000) detected at line 4080 Overfull \vbox (1.98598pt too high) detected at line 4080 [61] Underfull \vbox (badness 10000) detected at line 4080 Overfull \vbox (1.98598pt too high) detected at line 4080 [62] [63] [64] [65] [66] Underfull \vbox (badness 10000) detected at line 4358 Underfull \vbox (badness 10000) detected at line 4358 [67] Underfull \vbox (badness 10000) detected at line 4358 Overfull \vbox (1.98598pt too high) detected at line 4358 [68] Underfull \vbox (badness 1565) detected at line 4404 [69] [70] Overfull \vbox (2.98596pt too high) detected at line 4504 [71] [72] [73] Underfull \vbox (badness 2126) detected at line 4740 [74] [75] [76] [77] [78] Overfull \vbox (2.033pt too high) detected at line 5158 [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Overfull \hbox (11.06543pt too wide) in paragraph at lines 5685--5687 []\TU/FreeSerif(0)/m/n/10 Target particular jobs by RULE:WILDCARD1=VALUE,WILDCA RD2=VALUE,… [89] [90] [91] [92] [93] Underfull \hbox (badness 10000) in paragraph at lines 5946--5948 []\TU/FreeSerif(0)/m/n/10 Additional tibanna config e.g. –tibanna-config spot_i nstance=true sub- [94] [95] [96] Underfull \hbox (badness 10000) in paragraph at lines 6273--6273 []\TU/FreeSans(0)/m/n/10 Snakemake re- Overfull \hbox (0.88507pt too wide) in paragraph at lines 6273--6273 []\TU/FreeMono(0)/m/n/10 slurm_partition| Overfull \hbox (3.79732pt too wide) in paragraph at lines 6273--6273 [][]\TU/FreeMono(0)/m/n/10 c\TU/FreeSerif(0)/m/n/10 /[][]\TU/FreeMono(0)/m/n/10 cpus[]per[]task| [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 7013--7017 []\TU/FreeSerif(0)/m/n/10 The azure batch executor supports autoscaling of the batch nodes by including the flag [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 7213--7216 []|\TU/FreeSerif(0)/m/n/10 Snakemake gets the status of panoptes. Underfull \hbox (badness 6859) in paragraph at lines 7213--7216 \TU/FreeSerif(0)/m/n/10 Snakemake continues to run if the status Underfull \hbox (badness 10000) in paragraph at lines 7230--7232 []|\TU/FreeMono(0)/m/n/10 / Overfull \hbox (9.78429pt too wide) in paragraph at lines 7230--7232 \TU/FreeMono(0)/m/n/10 update_workflow_status| [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] Underfull \hbox (badness 5652) in paragraph at lines 8976--8980 \TU/FreeSerif(0)/m/n/10 Snakemake tracks the code that was used to create your files. In combination with [][]\TU/FreeMono(0)/m/n/10 summary \TU/FreeSerif(0)/ m/n/10 or [137] [138] [139] [140] [141] [142] [143] [144] Overfull \vbox (2.64099pt too high) detected at line 9545 [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] Overfull \vbox (0.688pt too high) detected at line 10609 [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] Underfull \hbox (badness 10000) in paragraph at lines 11299--11301 []\TU/FreeSerif(0)/m/n/10 When used in conjunction with \TU/FreeMono(0)/m/n/10 NCBI.RemoteProvider().search()\TU/FreeSerif(0)/m/n/10 , Snakemake and \TU/FreeM ono(0)/m/n/10 NCBI. Overfull \vbox (1.03299pt too high) detected at line 11355 [173] [174] Underfull \hbox (badness 5133) in paragraph at lines 11479--11486 []\TU/FreeSerif(0)/m/n/10 The default location for the configuration file is \T U/FreeMono(0)/m/n/10 ~/.irods/irods_environment.json\TU/FreeSerif(0)/m/n/10 . T he \TU/FreeMono(0)/m/n/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 11479--11486 \TU/FreeMono(0)/m/n/10 moteProvider() \TU/FreeSerif(0)/m/n/10 class accepts the parameter \TU/FreeMono(0)/m/n/10 irods_env_file \TU/FreeSerif(0)/m/n/10 where an alternative path to the [175] [176] [177] Underfull \hbox (badness 10000) in paragraph at lines 11628--11634 \TU/FreeSerif(0)/m/n/10 If you need to access a deposition with restricted acce ss, you have to additionally provide a \TU/FreeMono(0)/m/n/10 re- [178] [179] Underfull \hbox (badness 5878) in paragraph at lines 11786--11792 []\TU/FreeSerif(0)/m/n/10 First, we load a local configuration file. Next, we d efine the module \TU/FreeMono(0)/m/n/10 dna_seq \TU/FreeSerif(0)/m/n/10 to be l oaded from [180] Overfull \vbox (2.98596pt too high) detected at line 11881 [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Overfull \vbox (2.0pt too high) has occurred while \output is active [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] Underfull \vbox (badness 10000) detected at line 13935 Overfull \vbox (1.98598pt too high) detected at line 13935 [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 14076--14079 []\TU/FreeSerif(0)/m/n/10 Provide hyperlink targets, at least for the first two section levels. For this, use the format [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script= latn;language=dflt;! [240] [241] [242] [243] [244] Underfull \hbox (badness 10000) in paragraph at lines 16974--16976 []\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i n order to avoid race conditions in [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 10000) in paragraph at lines 19438--19441 []\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\ TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/ [269] [270] [271] [272] [273] [274] [275] [276] [277] [278] Underfull \hbox (badness 10000) in paragraph at lines 20504--20510 []\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/ FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1 0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use [279] [280] [281] (./Snakemake.ind) Package sphinx Warning: The package pict2e is required for rounded boxes. (sphinx) As it does not seem to be available on your system, (sphinx) options setting radii have all been ignored. Package sphinx Warning: The package ellipse is required for elliptical corners. (sphinx) As it does not seem to be available on your system, (sphinx) all non-straight corners have used circle arcs.. [282] (./Snakemake.aux) ) (see the transcript file for additional information) Output written on Snakemake.pdf (286 pages). Transcript written on Snakemake.log. Latexmk: Getting log file 'Snakemake.log' Latexmk: Examining 'Snakemake.fls' Latexmk: Examining 'Snakemake.log' Latexmk: Index file 'Snakemake.idx' was written Latexmk: Log file says output to 'Snakemake.pdf' Latexmk: Summary of warnings from last run of *latex: =====Latex reported missing or unavailable character(s). =====See log file for details. Latexmk: All targets () are up-to-date make[1]: Leaving directory '/builddir/build/BUILD/snakemake-7.32.4/docs/_build/latex' make: Entering directory '/builddir/build/BUILD/snakemake-7.32.4/docs' pdflatex finished; the PDF files are in _build/latex. make: Leaving directory '/builddir/build/BUILD/snakemake-7.32.4/docs' Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.io6y3B Latexmk: Missing input file 'Snakemake.toc' (or dependence on it) from following: No file Snakemake.toc. Latexmk: Missing input file 'Snakemake.ind' (or dependence on it) from following: No file Snakemake.ind. Latexmk: ====Undefined refs and citations with line #s in .tex file: Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script= Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script=latn;language=dflt;! + RPM_EC=0 ++ jobs -p + exit 0 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x '!=' / ']' + rm -rf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x ++ dirname /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 ++ xargs basename --multiple ++ ls /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir/snakemake-7.32.4-py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=snakemake==7.32.4 + '[' -z snakemake==7.32.4 ']' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir snakemake==7.32.4 Using pip 23.3.1 from /usr/lib/python3.12/site-packages/pip (python 3.12) Looking in links: /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir Processing ./pyproject-wheeldir/snakemake-7.32.4-py3-none-any.whl Installing collected packages: snakemake Creating /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin changing mode of /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake to 755 changing mode of /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake-bash-completion to 755 Successfully installed snakemake-7.32.4 + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake-bash-completion /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake: updating /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake-bash-completion: updating + rm -rfv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages ']' + site_dirs+=("/usr/lib/python3.12/site-packages") + '[' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib64/python3.12/site-packages '!=' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages ']' + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib64/python3.12/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x --record /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-record + rm -fv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD removed '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_PERCENTAGES_COUNT=2 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-files --output-modules /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-modules --buildroot /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x --sitelib /usr/lib/python3.12/site-packages --sitearch /usr/lib64/python3.12/site-packages --python-version 3.12 --pyproject-record /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-record --prefix /usr -l snakemake + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/man/man1 + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages + help2man --no-info '--name=Metapackage for snakemake: azure extras' snakemake + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/bash-completion/completions + touch Snakefile + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages + snakemake --bash-completion + install -t /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles + cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles 'misc/vim/README.md' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/README.md' 'misc/vim/ftdetect' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftdetect' 'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftdetect/snakemake.vim' 'misc/vim/ftplugin' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftplugin' 'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftplugin/snakemake' 'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim' 'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim' 'misc/vim/syntax' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/syntax' 'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/syntax/snakemake.vim' + find /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/README.md + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 7.32.4-3.fc40 --unique-debug-suffix -7.32.4-3.fc40.s390x --unique-debug-src-base snakemake-7.32.4-3.fc40.s390x --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/snakemake-7.32.4 find-debuginfo: starting Extracting debug info from 0 files Creating .debug symlinks for symlinks to ELF files find: ‘debug’: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.gLqm1V + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 + k='not test_lint[long_run-positive]' + k='not test_lint[long_run-positive] and not test_tibanna' + k='not test_lint[long_run-positive] and not test_tibanna and not test_tes' + k='not test_lint[long_run-positive] and not test_tibanna and not test_tes and not test_slurm_' + ignore=' --ignore=tests/test_google_lifesciences.py' + ignore=' --ignore=tests/test_google_lifesciences.py --ignore-glob=tests/test_conda_python_3_7_script/*' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=2 + /usr/bin/pytest -v -k 'not test_lint[long_run-positive] and not test_tibanna and not test_tes and not test_slurm_' --ignore=tests/test_google_lifesciences.py '--ignore-glob=tests/test_conda_python_3_7_script/*' ============================= test session starts ============================== platform linux -- Python 3.12.1, pytest-7.4.3, pluggy-1.3.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/snakemake-7.32.4 plugins: requests-mock-1.10.0 collecting ... collected 66 items / 8 deselected / 58 selected tests/test_azure_batch_executor.py::test_az_batch_executor SKIPPED (...) [ 1%] tests/test_expand.py::test_simple_expand PASSED [ 3%] tests/test_expand.py::test_allow_missing PASSED [ 5%] tests/test_io.py::test_wildcard_regex PASSED [ 6%] tests/test_io.py::test_expand PASSED [ 8%] tests/test_kubernetes.py::test_kubernetes_plain SKIPPED (Skipping GC...) [ 10%] tests/test_kubernetes.py::test_kubernetes_conda SKIPPED (Skipping GC...) [ 12%] tests/test_kubernetes.py::test_kubernetes_singularity SKIPPED (Skipp...) [ 13%] tests/test_kubernetes.py::test_kubernetes_conda_singularity SKIPPED [ 15%] tests/test_kubernetes.py::test_issue1041 SKIPPED (Skipping GCLOUD te...) [ 17%] tests/test_linting.py::test_lint[version-positive] PASSED [ 18%] tests/test_linting.py::test_lint[version-negative] PASSED [ 20%] tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 22%] tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 24%] tests/test_linting.py::test_lint[singularity-positive] PASSED [ 25%] tests/test_linting.py::test_lint[singularity-negative] PASSED [ 27%] tests/test_linting.py::test_lint[path_add-positive] PASSED [ 29%] tests/test_linting.py::test_lint[path_add-negative] PASSED [ 31%] tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 32%] tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 34%] tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 36%] tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 37%] tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 39%] tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 41%] tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 43%] tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 44%] tests/test_linting.py::test_lint[long_run-negative] PASSED [ 46%] tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 48%] tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 50%] tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 51%] tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 53%] tests/test_linting.py::test_lint[envvars-positive] PASSED [ 55%] tests/test_linting.py::test_lint[envvars-negative] PASSED [ 56%] tests/test_linting.py::test_lint[dynamic-positive] PASSED [ 58%] tests/test_linting.py::test_lint[dynamic-negative] PASSED [ 60%] tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 62%] tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 63%] tests/test_persistence.py::TestCleanupContainers::test_one_unrequired_container_gets_removed PASSED [ 65%] tests/test_schema.py::test_config PASSED [ 67%] tests/test_schema.py::test_config_ref PASSED [ 68%] tests/test_schema.py::test_dataframe PASSED [ 70%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_shebang_and_second_manifest PASSED [ 72%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_with_shebang PASSED [ 74%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_without_shebang PASSED [ 75%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_empty_line_without_shebang PASSED [ 77%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_is_case_insensitive PASSED [ 79%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spacing_has_no_impact PASSED [ 81%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_formatting_not_touched_even_if_wrong PASSED [ 82%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spelt_wrong PASSED [ 84%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_shebang PASSED [ 86%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_without_shebang PASSED [ 87%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_spacing_around_language PASSED [ 89%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_has_non_cargo_block PASSED [ 91%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_missing_closing_fence PASSED [ 93%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_not_in_first_comment_block PASSED [ 94%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_outer_line_doc_comment PASSED [ 96%] tests/test_script.py::TestBashEncoder::test_named_list_one_named_one_str PASSED [ 98%] tests/test_script.py::TestBashEncoder::test_named_list_named_is_list PASSED [100%] =============================== warnings summary =============================== tests/test_schema.py: 12 warnings /builddir/build/BUILD/snakemake-7.32.4/snakemake/utils.py:50: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need. from jsonschema import validators, RefResolver tests/test_schema.py::test_config :488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/test_schema.py::test_config :488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/test_schema.py::test_config /usr/lib64/python3.12/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). _EPOCH_DATETIME = datetime.utcfromtimestamp(0) tests/test_schema.py::test_dataframe /usr/lib64/python3.12/site-packages/pandas/core/algorithms.py:522: DeprecationWarning: np.find_common_type is deprecated. Please use `np.result_type` or `np.promote_types`. See https://numpy.org/devdocs/release/1.25.0-notes.html and the docs for more information. (Deprecated NumPy 1.25) common = np.find_common_type([values.dtype, comps_array.dtype], []) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========== 52 passed, 6 skipped, 8 deselected, 16 warnings in 14.64s =========== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: snakemake-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake) = 7.32.4 python3dist(snakemake) = 7.32.4 snakemake = 7.32.4-3.fc40 vim-snakemake = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.12dist(jinja2) < 4~~ with python3.12dist(jinja2) >= 3) (python3.12dist(yte) < 2~~ with python3.12dist(yte) >= 1.5.1) /usr/bin/python3 python(abi) = 3.12 python3.12dist(appdirs) python3.12dist(configargparse) python3.12dist(connection-pool) >= 0.0.3 python3.12dist(datrie) python3.12dist(docutils) python3.12dist(gitpython) python3.12dist(humanfriendly) python3.12dist(jsonschema) python3.12dist(nbformat) python3.12dist(packaging) python3.12dist(psutil) python3.12dist(pulp) >= 2 python3.12dist(pyyaml) python3.12dist(requests) python3.12dist(reretry) python3.12dist(smart-open) >= 3 python3.12dist(stopit) python3.12dist(tabulate) python3.12dist(throttler) python3.12dist(toposort) >= 1.10 python3.12dist(wrapt) Processing files: snakemake-doc-7.32.4-3.fc40.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.OYFNRT + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + DOCDIR=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README-nano.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README-vim.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/docs/_build/latex/Snakemake.pdf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.dKa6td + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + LICENSEDIR=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/licenses/snakemake-doc + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/licenses/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/LICENSE.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/licenses/snakemake-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: snakemake-doc = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: snakemake+reports-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake[reports]) = 7.32.4 python3dist(snakemake[reports]) = 7.32.4 snakemake+reports = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(pygments) Processing files: snakemake+messaging-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake[messaging]) = 7.32.4 python3dist(snakemake[messaging]) = 7.32.4 snakemake+messaging = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(slacker) Processing files: snakemake+google-cloud-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake[google-cloud]) = 7.32.4 python3dist(snakemake[google-cloud]) = 7.32.4 snakemake+google-cloud = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(google-api-python-client) python3.12dist(google-cloud-storage) python3.12dist(google-crc32c) python3.12dist(oauth2client) Processing files: snakemake+azure-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake[azure]) = 7.32.4 python3dist(snakemake[azure]) = 7.32.4 snakemake+azure = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(azure-batch) python3.12dist(azure-core) python3.12dist(azure-identity) python3.12dist(azure-mgmt-batch) python3.12dist(azure-storage-blob) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.src.rpm Wrote: /builddir/build/RPMS/snakemake-doc-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+google-cloud-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+messaging-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+reports-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+azure-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake-7.32.4-3.fc40.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.joaRZb + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + /usr/bin/rm -rf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.tOBC8i + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + rm -rf snakemake-7.32.4 snakemake-7.32.4.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild snakemake-7.32.4-3.fc40.src.rpm Finish: build phase for snakemake-7.32.4-3.fc40.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-s390x-1704460510.976858/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-7.32.4-3.fc40.src.rpm) Config(child) 2 minutes 18 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "snakemake+google-cloud", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake+messaging", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake+reports", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake-doc", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake+azure", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "src" }, { "name": "snakemake", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" } ] } RPMResults finished