Warning: Permanently added '13.122.86.161' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/9390315-fedora-41-s390x --chroot fedora-41-s390x Version: 1.3 PID: 17751 Logging PID: 17752 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 9390315, 'buildroot_pkgs': [], 'chroot': 'fedora-41-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': '0ceb59c9287961a480627d6236d027f5db2f263c', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3:pr:fork-jjames-rpms-ProDy-6/ProDy', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'ProDy', 'package_version': '2.4.1-15', 'project_dirname': 'scipy-1.8.3:pr:fork-jjames-rpms-ProDy-6', 'project_name': 'scipy-1.8.3', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/scipy-1.8.3/fedora-41-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/scipy-1.8.3:pr:fork-jjames-rpms-ProDy-6/fedora-41-s390x/', 'id': 'copr_coprdir', 'name': 'Coprdir repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/scipy-1.8.3--https://src.fedoraproject.org/user/jjames', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/jjames', 'tags': [], 'task_id': '9390315-fedora-41-s390x', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3:pr:fork-jjames-rpms-ProDy-6/ProDy /var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3:pr:fork-jjames-rpms-ProDy-6/ProDy', '/var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy'... Running: git checkout 0ceb59c9287961a480627d6236d027f5db2f263c -- cmd: ['git', 'checkout', '0ceb59c9287961a480627d6236d027f5db2f263c', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy rc: 0 stdout: stderr: Note: switching to '0ceb59c9287961a480627d6236d027f5db2f263c'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 0ceb59c automatic import of ProDy Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading ProDy-2.4.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o ProDy-2.4.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/scipy-1.8.3:pr:fork-jjames-rpms-ProDy-6/ProDy/ProDy-2.4.1.tar.gz/md5/ed3fa7549c21d8c68ed832b970952fe4/ProDy-2.4.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 25.9M 100 25.9M 0 0 14.2M 0 0:00:01 0:00:01 --:--:-- 14.2M INFO: Reading stdout from command: md5sum ProDy-2.4.1.tar.gz tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1754720849.198309 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.3 starting (python version = 3.13.5, NVR = mock-6.3-1.fc42), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1754720849.198309 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy/ProDy.spec) Config(fedora-41-s390x) Start: clean chroot Finish: clean chroot Mock Version: 6.3 INFO: Mock Version: 6.3 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-s390x-bootstrap-1754720849.198309/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Tagging container image as mock-bootstrap-0e3c8150-0409-46e4-a0f1-ba6b332fad84 INFO: Checking that f653f30e7bd193fcd4785444e46fa791bfa63c9200f2fbbf3ba805af74388dff image matches host's architecture INFO: Copy content of container f653f30e7bd193fcd4785444e46fa791bfa63c9200f2fbbf3ba805af74388dff to /var/lib/mock/fedora-41-s390x-bootstrap-1754720849.198309/root INFO: mounting f653f30e7bd193fcd4785444e46fa791bfa63c9200f2fbbf3ba805af74388dff with podman image mount INFO: image f653f30e7bd193fcd4785444e46fa791bfa63c9200f2fbbf3ba805af74388dff as /var/lib/containers/storage/overlay/b1d1bd8f342d3a827f2c03bf22ca2e7b4d08c64c5928ee940024910dd8f8c3bd/merged INFO: umounting image f653f30e7bd193fcd4785444e46fa791bfa63c9200f2fbbf3ba805af74388dff (/var/lib/containers/storage/overlay/b1d1bd8f342d3a827f2c03bf22ca2e7b4d08c64c5928ee940024910dd8f8c3bd/merged) with podman image umount INFO: Removing image mock-bootstrap-0e3c8150-0409-46e4-a0f1-ba6b332fad84 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-s390x-1754720849.198309/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.1-1.fc41.s390x rpm-sequoia-1.7.0-5.fc41.s390x dnf5-5.2.15.0-2.fc41.s390x dnf5-plugins-5.2.15.0-2.fc41.s390x Start: installing minimal buildroot with dnf5 Updating and loading repositories: Coprdir repository 100% | 1.3 KiB/s | 1.6 KiB | 00m01s Copr repository 100% | 200.4 KiB/s | 341.6 KiB | 00m02s Additional repo http_kojipkgs_fedorapr 100% | 4.6 MiB/s | 13.9 MiB | 00m03s updates 100% | 4.8 MiB/s | 22.2 MiB | 00m05s fedora 100% | 5.4 MiB/s | 32.8 MiB | 00m06s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash s390x 5.3.0-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.6 MiB bzip2 s390x 1.0.8-21.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 86.9 KiB coreutils s390x 9.7-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.7 MiB cpio s390x 2.15-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB diffutils s390x 3.12-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB fedora-release-common noarch 43-0.19 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.4 KiB findutils s390x 1:4.10.0-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB gawk s390x 5.3.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB glibc-minimal-langpack s390x 2.42-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B grep s390x 3.12-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB gzip s390x 1.13-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 396.5 KiB info s390x 7.2-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 397.0 KiB patch s390x 2.8-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 238.3 KiB redhat-rpm-config noarch 343-10.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 182.9 KiB rpm-build s390x 5.99.91-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 279.5 KiB sed s390x 4.9-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 865.0 KiB shadow-utils s390x 2:4.18.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.0 MiB tar s390x 2:1.35-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB unzip s390x 6.0-67.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 393.5 KiB util-linux s390x 2.41.1-15.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.4 MiB which s390x 2.23-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83.2 KiB xz s390x 1:5.8.1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 MiB Installing dependencies: add-determinism s390x 0.6.0-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.7 MiB alternatives s390x 1.33-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 62.0 KiB ansible-srpm-macros noarch 1-18.1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.7 KiB audit-libs s390x 4.1.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 398.1 KiB binutils s390x 2.45-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.0 MiB build-reproducibility-srpm-macros noarch 0.6.0-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 735.0 B bzip2-libs s390x 1.0.8-21.fc43 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40.1 KiB elfutils s390x 0.193-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB elfutils-debuginfod-client s390x 0.193-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75.5 KiB elfutils-default-yama-scope noarch 0.193-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 KiB elfutils-libelf s390x 0.193-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB elfutils-libs s390x 0.193-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 774.2 KiB fedora-gpg-keys noarch 43-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 129.0 KiB fedora-release noarch 43-0.19 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B fedora-release-identity-basic noarch 43-0.19 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 664.0 B fedora-repos noarch 43-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.9 KiB fedora-repos-rawhide noarch 43-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 KiB file s390x 5.46-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100.0 KiB file-libs s390x 5.46-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.9 MiB filesystem s390x 3.18-50.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B filesystem-srpm-macros noarch 3.18-50.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.2 KiB fonts-srpm-macros noarch 1:2.0.5-23.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 55.8 KiB forge-srpm-macros noarch 0.4.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.9 KiB fpc-srpm-macros noarch 1.3-15.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.0 B gdb-minimal s390x 16.3-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.2 MiB gdbm-libs s390x 1:1.23-10.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125.4 KiB ghc-srpm-macros noarch 1.9.2-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 779.0 B glibc s390x 2.42-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.2 MiB glibc-common s390x 2.42-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB glibc-gconv-extra s390x 2.42-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.7 MiB gmp s390x 1:6.3.0-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 773.9 KiB gnat-srpm-macros noarch 6-8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 KiB gnupg2 s390x 2.4.8-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.6 MiB gnupg2-dirmngr s390x 2.4.8-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 661.7 KiB gnupg2-gpg-agent s390x 2.4.8-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 718.3 KiB gnupg2-gpgconf s390x 2.4.8-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 269.4 KiB gnupg2-keyboxd s390x 2.4.8-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 209.1 KiB gnupg2-verify s390x 2.4.8-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 364.2 KiB gnutls s390x 3.8.10-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.5 MiB go-srpm-macros noarch 3.7.0-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 61.6 KiB gpgverify noarch 2.2-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.7 KiB ima-evm-utils-libs s390x 1.6.2-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 56.4 KiB jansson s390x 2.14-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.8 KiB java-srpm-macros noarch 1-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 870.0 B json-c s390x 0.18-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 82.4 KiB 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3.9-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 208.9 KiB libsemanage s390x 3.9-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 312.0 KiB libsepol s390x 3.9-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 853.6 KiB libsmartcols s390x 2.41.1-15.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.2 KiB libssh s390x 0.11.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 582.4 KiB libssh-config noarch 0.11.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 277.0 B libstdc++ s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 MiB libtasn1 s390x 4.20.0-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 188.1 KiB libtool-ltdl s390x 2.5.4-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 69.7 KiB libunistring s390x 1.1-10.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB libusb1 s390x 1.0.29-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 170.6 KiB libuuid s390x 2.41.1-15.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 33.1 KiB libverto s390x 0.3.2-11.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 25.1 KiB libxcrypt s390x 4.4.38-8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 288.2 KiB libxml2 s390x 2.12.10-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB libzstd s390x 1.5.7-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 875.5 KiB lua-libs s390x 5.4.8-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 316.8 KiB lua-srpm-macros noarch 1-16.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 KiB lz4-libs s390x 1.10.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 201.2 KiB mpfr s390x 4.2.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 699.5 KiB ncurses-base noarch 6.5-7.20250614.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 328.1 KiB ncurses-libs s390x 6.5-7.20250614.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB nettle s390x 3.10.1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 829.7 KiB npth s390x 1.8-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45.2 KiB ocaml-srpm-macros noarch 11-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-20.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap s390x 2.6.10-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 669.3 KiB openssl-libs s390x 1:3.5.1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.3 MiB p11-kit s390x 0.25.5-9.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB p11-kit-trust s390x 0.25.5-9.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 462.9 KiB package-notes-srpm-macros noarch 0.5-14.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam-libs s390x 1.7.1-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 122.1 KiB pcre2 s390x 10.45-1.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 717.0 KiB pcre2-syntax noarch 10.45-1.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 273.9 KiB perl-srpm-macros noarch 1-60.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf s390x 2.3.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.2 KiB pkgconf-m4 noarch 2.3.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config s390x 2.3.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 988.0 B popt s390x 1.19-9.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 140.5 KiB publicsuffix-list-dafsa noarch 20250616-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 69.1 KiB pyproject-srpm-macros noarch 1.18.3-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.14-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.5 KiB qt5-srpm-macros noarch 5.15.17-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.9.1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 464.0 B readline s390x 8.3-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 575.3 KiB rpm s390x 5.99.91-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB rpm-build-libs s390x 5.99.91-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 275.9 KiB rpm-libs s390x 5.99.91-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB rpm-sequoia s390x 1.9.0-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB rpm-sign-libs s390x 5.99.91-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.5 KiB rust-srpm-macros noarch 26.3-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-26.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 725.0 KiB sqlite-libs s390x 3.50.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB systemd-libs s390x 257.7-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB systemd-standalone-sysusers s390x 257.7-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 281.2 KiB tpm2-tss s390x 4.1.3-8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB tree-sitter-srpm-macros noarch 0.4.2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.3 KiB util-linux-core s390x 2.41.1-15.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB xxhash-libs s390x 0.8.3-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65.7 KiB xz-libs s390x 1:5.8.1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 221.3 KiB zig-srpm-macros noarch 1-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip s390x 3.0-44.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 729.6 KiB zlib-ng-compat s390x 2.2.5-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 109.1 KiB zstd s390x 1.5.7-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 169 packages Total size of inbound packages is 59 MiB. Need to download 59 MiB. After this operation, 201 MiB extra will be used (install 201 MiB, remove 0 B). [ 1/169] bzip2-0:1.0.8-21.fc43.s390x 100% | 71.7 KiB/s | 52.4 KiB | 00m01s [ 2/169] coreutils-0:9.7-5.fc43.s390x 100% | 1.1 MiB/s | 1.2 MiB | 00m01s [ 3/169] cpio-0:2.15-6.fc43.s390x 100% | 691.6 KiB/s | 290.5 KiB | 00m00s [ 4/169] bash-0:5.3.0-2.fc43.s390x 100% | 1.6 MiB/s | 1.9 MiB | 00m01s [ 5/169] diffutils-0:3.12-3.fc43.s390x 100% | 1.9 MiB/s | 395.6 KiB | 00m00s [ 6/169] fedora-release-common-0:43-0. 100% | 119.9 KiB/s | 25.4 KiB | 00m00s [ 7/169] findutils-1:4.10.0-6.fc43.s39 100% | 2.6 MiB/s | 546.8 KiB | 00m00s [ 8/169] gawk-0:5.3.2-2.fc43.s390x 100% | 5.5 MiB/s | 1.1 MiB | 00m00s [ 9/169] glibc-minimal-langpack-0:2.42 100% | 177.7 KiB/s | 37.0 KiB | 00m00s [ 10/169] grep-0:3.12-2.fc43.s390x 100% | 1.4 MiB/s | 294.1 KiB | 00m00s [ 11/169] gzip-0:1.13-4.fc43.s390x 100% | 825.4 KiB/s | 170.9 KiB | 00m00s [ 12/169] patch-0:2.8-2.fc43.s390x 100% | 606.5 KiB/s | 119.5 KiB | 00m00s [ 13/169] info-0:7.2-6.fc43.s390x 100% | 918.5 KiB/s | 192.9 KiB | 00m00s [ 14/169] redhat-rpm-config-0:343-10.fc 100% | 356.6 KiB/s | 73.1 KiB | 00m00s [ 15/169] sed-0:4.9-5.fc43.s390x 100% | 1.5 MiB/s | 310.7 KiB | 00m00s [ 16/169] rpm-build-0:5.99.91-3.fc43.s3 100% | 627.2 KiB/s | 131.1 KiB | 00m00s [ 17/169] shadow-utils-2:4.18.0-3.fc43. 100% | 5.7 MiB/s | 1.2 MiB | 00m00s [ 18/169] unzip-0:6.0-67.fc43.s390x 100% | 973.2 KiB/s | 192.7 KiB | 00m00s [ 19/169] tar-2:1.35-6.fc43.s390x 100% | 2.7 MiB/s | 865.4 KiB | 00m00s [ 20/169] util-linux-0:2.41.1-15.fc43.s 100% | 5.3 MiB/s | 1.1 MiB | 00m00s [ 21/169] which-0:2.23-3.fc43.s390x 100% | 211.8 KiB/s | 43.0 KiB | 00m00s [ 22/169] xz-1:5.8.1-2.fc43.s390x 100% | 2.6 MiB/s | 558.9 KiB | 00m00s [ 23/169] filesystem-0:3.18-50.fc43.s39 100% | 6.5 MiB/s | 1.3 MiB | 00m00s [ 24/169] coreutils-common-0:9.7-5.fc43 100% | 6.6 MiB/s | 2.1 MiB | 00m00s [ 25/169] glibc-0:2.42-2.fc43.s390x 100% | 8.7 MiB/s | 1.8 MiB | 00m00s [ 26/169] fedora-repos-0:43-0.2.noarch 100% | 44.2 KiB/s | 9.2 KiB | 00m00s [ 27/169] glibc-common-0:2.42-2.fc43.s3 100% | 1.6 MiB/s | 336.7 KiB | 00m00s [ 28/169] filesystem-srpm-macros-0:3.18 100% | 127.0 KiB/s | 26.4 KiB | 00m00s [ 29/169] java-srpm-macros-0:1-7.fc43.n 100% | 38.7 KiB/s | 7.9 KiB | 00m00s [ 30/169] rpm-0:5.99.91-3.fc43.s390x 100% | 2.4 MiB/s | 533.1 KiB | 00m00s [ 31/169] libblkid-0:2.41.1-15.fc43.s39 100% | 628.4 KiB/s | 127.6 KiB | 00m00s [ 32/169] libfdisk-0:2.41.1-15.fc43.s39 100% | 783.3 KiB/s | 164.5 KiB | 00m00s [ 33/169] liblastlog2-0:2.41.1-15.fc43. 100% | 110.5 KiB/s | 22.4 KiB | 00m00s [ 34/169] libmount-0:2.41.1-15.fc43.s39 100% | 780.9 KiB/s | 163.2 KiB | 00m00s [ 35/169] libsmartcols-0:2.41.1-15.fc43 100% | 415.8 KiB/s | 84.8 KiB | 00m00s [ 36/169] libuuid-0:2.41.1-15.fc43.s390 100% | 125.3 KiB/s | 26.3 KiB | 00m00s [ 37/169] util-linux-core-0:2.41.1-15.f 100% | 2.6 MiB/s | 541.5 KiB | 00m00s [ 38/169] xz-libs-1:5.8.1-2.fc43.s390x 100% | 556.2 KiB/s | 117.9 KiB | 00m00s [ 39/169] glibc-gconv-extra-0:2.42-2.fc 100% | 7.3 MiB/s | 1.6 MiB | 00m00s [ 40/169] fedora-gpg-keys-0:43-0.2.noar 100% | 605.0 KiB/s | 125.8 KiB | 00m00s [ 41/169] fedora-repos-rawhide-0:43-0.2 100% | 43.2 KiB/s | 8.8 KiB | 00m00s [ 42/169] rpm-libs-0:5.99.91-3.fc43.s39 100% | 1.9 MiB/s | 407.9 KiB | 00m00s [ 43/169] rpm-sequoia-0:1.9.0-2.fc43.s3 100% | 4.4 MiB/s | 947.3 KiB | 00m00s [ 44/169] rpm-build-libs-0:5.99.91-3.fc 100% | 621.5 KiB/s | 129.3 KiB | 00m00s [ 45/169] rpm-sign-libs-0:5.99.91-3.fc4 100% | 135.7 KiB/s | 27.7 KiB | 00m00s [ 46/169] libgcc-0:15.1.1-5.fc43.1.s390 100% | 422.9 KiB/s | 88.8 KiB | 00m00s [ 47/169] libselinux-0:3.9-2.fc43.s390x 100% | 493.2 KiB/s | 100.6 KiB | 00m00s [ 48/169] libsepol-0:3.9-2.fc43.s390x 100% | 1.6 MiB/s | 348.5 KiB | 00m00s [ 49/169] libxcrypt-0:4.4.38-8.fc43.s39 100% | 646.9 KiB/s | 132.0 KiB | 00m00s [ 50/169] ncurses-libs-0:6.5-7.20250614 100% | 1.7 MiB/s | 360.0 KiB | 00m00s [ 51/169] ncurses-base-0:6.5-7.20250614 100% | 310.6 KiB/s | 63.7 KiB | 00m00s [ 52/169] systemd-libs-0:257.7-1.fc43.s 100% | 3.6 MiB/s | 793.0 KiB | 00m00s [ 53/169] audit-libs-0:4.1.1-1.fc43.s39 100% | 683.8 KiB/s | 140.9 KiB | 00m00s [ 54/169] libcap-ng-0:0.8.5-6.fc43.s390 100% | 156.0 KiB/s | 32.6 KiB | 00m00s [ 55/169] pam-libs-0:1.7.1-3.fc43.s390x 100% | 286.3 KiB/s | 58.4 KiB | 00m00s [ 56/169] libeconf-0:0.7.9-2.fc43.s390x 100% | 174.9 KiB/s | 36.5 KiB | 00m00s [ 57/169] readline-0:8.3-2.fc43.s390x 100% | 1.1 MiB/s | 241.6 KiB | 00m00s [ 58/169] zlib-ng-compat-0:2.2.5-1.fc43 100% | 320.1 KiB/s | 66.9 KiB | 00m00s [ 59/169] bzip2-libs-0:1.0.8-21.fc43.s3 100% | 232.1 KiB/s | 47.6 KiB | 00m00s [ 60/169] libacl-0:2.3.2-4.fc43.s390x 100% | 118.8 KiB/s | 24.9 KiB | 00m00s [ 61/169] libcap-0:2.76-2.fc43.s390x 100% | 444.2 KiB/s | 90.2 KiB | 00m00s [ 62/169] libsemanage-0:3.9-2.fc43.s390 100% | 589.0 KiB/s | 122.5 KiB | 00m00s [ 63/169] setup-0:2.15.0-26.fc43.noarch 100% | 730.4 KiB/s | 151.2 KiB | 00m00s [ 64/169] gnupg2-0:2.4.8-4.fc43.s390x 100% | 7.7 MiB/s | 1.6 MiB | 00m00s [ 65/169] gpgverify-0:2.2-3.fc43.noarch 100% | 53.9 KiB/s | 11.1 KiB | 00m00s [ 66/169] gnupg2-dirmngr-0:2.4.8-4.fc43 100% | 1.3 MiB/s | 288.0 KiB | 00m00s [ 67/169] gnupg2-gpg-agent-0:2.4.8-4.fc 100% | 1.4 MiB/s | 285.2 KiB | 00m00s [ 68/169] gnupg2-gpgconf-0:2.4.8-4.fc43 100% | 583.6 KiB/s | 122.0 KiB | 00m00s [ 69/169] gnupg2-keyboxd-0:2.4.8-4.fc43 100% | 477.7 KiB/s | 97.9 KiB | 00m00s [ 70/169] gnupg2-verify-0:2.4.8-4.fc43. 100% | 829.3 KiB/s | 175.0 KiB | 00m00s [ 71/169] ima-evm-utils-libs-0:1.6.2-6. 100% | 143.0 KiB/s | 29.0 KiB | 00m00s [ 72/169] libfsverity-0:1.6-3.fc43.s390 100% | 87.3 KiB/s | 18.2 KiB | 00m00s [ 73/169] libstdc++-0:15.1.1-5.fc43.1.s 100% | 4.7 MiB/s | 1.0 MiB | 00m00s [ 74/169] popt-0:1.19-9.fc43.s390x 100% | 290.9 KiB/s | 61.4 KiB | 00m00s [ 75/169] openssl-libs-1:3.5.1-2.fc43.s 100% | 11.2 MiB/s | 2.3 MiB | 00m00s [ 76/169] libzstd-0:1.5.7-2.fc43.s390x 100% | 1.6 MiB/s | 348.6 KiB | 00m00s [ 77/169] lua-libs-0:5.4.8-2.fc43.s390x 100% | 692.6 KiB/s | 141.3 KiB | 00m00s [ 78/169] sqlite-libs-0:3.50.2-2.fc43.s 100% | 3.7 MiB/s | 807.8 KiB | 00m00s [ 79/169] elfutils-libelf-0:0.193-3.fc4 100% | 1.0 MiB/s | 212.9 KiB | 00m00s [ 80/169] elfutils-libs-0:0.193-3.fc43. 100% | 1.4 MiB/s | 289.5 KiB | 00m00s [ 81/169] elfutils-0:0.193-3.fc43.s390x 100% | 2.8 MiB/s | 587.7 KiB | 00m00s [ 82/169] elfutils-debuginfod-client-0: 100% | 227.3 KiB/s | 47.3 KiB | 00m00s [ 83/169] file-libs-0:5.46-6.fc43.s390x 100% | 4.0 MiB/s | 854.3 KiB | 00m00s [ 84/169] file-0:5.46-6.fc43.s390x 100% | 233.3 KiB/s | 49.0 KiB | 00m00s [ 85/169] libgomp-0:15.1.1-5.fc43.1.s39 100% | 1.8 MiB/s | 370.2 KiB | 00m00s [ 86/169] alternatives-0:1.33-2.fc43.s3 100% | 202.0 KiB/s | 41.4 KiB | 00m00s [ 87/169] binutils-0:2.45-1.fc43.s390x 100% | 14.3 MiB/s | 6.1 MiB | 00m00s [ 88/169] debugedit-0:5.2-2.fc43.s390x 100% | 408.7 KiB/s | 83.8 KiB | 00m00s [ 89/169] jansson-0:2.14-3.fc43.s390x 100% | 114.6 KiB/s | 45.0 KiB | 00m00s [ 90/169] libarchive-0:3.8.1-3.fc43.s39 100% | 2.2 MiB/s | 452.6 KiB | 00m00s [ 91/169] pkgconf-pkg-config-0:2.3.0-3. 100% | 46.0 KiB/s | 9.5 KiB | 00m00s [ 92/169] pkgconf-0:2.3.0-3.fc43.s390x 100% | 227.4 KiB/s | 45.3 KiB | 00m00s [ 93/169] pkgconf-m4-0:2.3.0-3.fc43.noa 100% | 68.9 KiB/s | 13.9 KiB | 00m00s [ 94/169] libpkgconf-0:2.3.0-3.fc43.s39 100% | 182.9 KiB/s | 38.2 KiB | 00m00s [ 95/169] curl-0:8.15.0-2.fc43.s390x 100% | 1.1 MiB/s | 237.0 KiB | 00m00s [ 96/169] zstd-0:1.5.7-2.fc43.s390x 100% | 1.3 MiB/s | 521.1 KiB | 00m00s [ 97/169] ansible-srpm-macros-0:1-18.1. 100% | 95.7 KiB/s | 19.9 KiB | 00m00s [ 98/169] build-reproducibility-srpm-ma 100% | 58.2 KiB/s | 11.8 KiB | 00m00s [ 99/169] dwz-0:0.16-2.fc43.s390x 100% | 707.0 KiB/s | 144.2 KiB | 00m00s [100/169] add-determinism-0:0.6.0-2.fc4 100% | 4.5 MiB/s | 972.0 KiB | 00m00s [101/169] efi-srpm-macros-0:6-4.fc43.no 100% | 108.7 KiB/s | 22.4 KiB | 00m00s [102/169] fonts-srpm-macros-1:2.0.5-23. 100% | 132.5 KiB/s | 27.2 KiB | 00m00s [103/169] forge-srpm-macros-0:0.4.0-3.f 100% | 97.5 KiB/s | 20.1 KiB | 00m00s [104/169] fpc-srpm-macros-0:1.3-15.fc43 100% | 38.5 KiB/s | 7.9 KiB | 00m00s [105/169] gnat-srpm-macros-0:6-8.fc43.n 100% | 42.6 KiB/s | 8.5 KiB | 00m00s [106/169] ghc-srpm-macros-0:1.9.2-3.fc4 100% | 41.6 KiB/s | 8.7 KiB | 00m00s [107/169] go-srpm-macros-0:3.7.0-4.fc43 100% | 137.3 KiB/s | 28.1 KiB | 00m00s [108/169] lua-srpm-macros-0:1-16.fc43.n 100% | 43.8 KiB/s | 8.8 KiB | 00m00s [109/169] kernel-srpm-macros-0:1.0-27.f 100% | 42.9 KiB/s | 8.9 KiB | 00m00s [110/169] ocaml-srpm-macros-0:11-2.fc43 100% | 45.8 KiB/s | 9.3 KiB | 00m00s [111/169] openblas-srpm-macros-0:2-20.f 100% | 37.6 KiB/s | 7.6 KiB | 00m00s [112/169] package-notes-srpm-macros-0:0 100% | 44.0 KiB/s | 9.0 KiB | 00m00s [113/169] perl-srpm-macros-0:1-60.fc43. 100% | 40.8 KiB/s | 8.3 KiB | 00m00s [114/169] python-srpm-macros-0:3.14-4.f 100% | 117.3 KiB/s | 23.3 KiB | 00m00s [115/169] pyproject-srpm-macros-0:1.18. 100% | 64.3 KiB/s | 13.4 KiB | 00m00s [116/169] qt5-srpm-macros-0:5.15.17-2.f 100% | 42.5 KiB/s | 8.7 KiB | 00m00s [117/169] rust-srpm-macros-0:26.3-5.fc4 100% | 55.9 KiB/s | 11.2 KiB | 00m00s [118/169] qt6-srpm-macros-0:6.9.1-2.fc4 100% | 44.9 KiB/s | 9.3 KiB | 00m00s [119/169] tree-sitter-srpm-macros-0:0.4 100% | 65.4 KiB/s | 13.4 KiB | 00m00s [120/169] zip-0:3.0-44.fc43.s390x 100% | 1.4 MiB/s | 279.6 KiB | 00m00s [121/169] zig-srpm-macros-0:1-5.fc43.no 100% | 40.4 KiB/s | 8.4 KiB | 00m00s [122/169] ed-0:1.22-2.fc43.s390x 100% | 417.6 KiB/s | 84.8 KiB | 00m00s [123/169] libattr-0:2.5.2-6.fc43.s390x 100% | 86.8 KiB/s | 18.1 KiB | 00m00s [124/169] ca-certificates-0:2024.2.69_v 100% | 3.1 MiB/s | 944.0 KiB | 00m00s [125/169] crypto-policies-0:20250714-3. 100% | 366.6 KiB/s | 74.8 KiB | 00m00s [126/169] pcre2-0:10.45-1.fc43.1.s390x 100% | 1.3 MiB/s | 278.6 KiB | 00m00s [127/169] pcre2-syntax-0:10.45-1.fc43.1 100% | 785.1 KiB/s | 161.7 KiB | 00m00s [128/169] libxml2-0:2.12.10-3.fc43.s390 100% | 3.3 MiB/s | 703.7 KiB | 00m00s [129/169] lz4-libs-0:1.10.0-3.fc43.s390 100% | 467.7 KiB/s | 95.9 KiB | 00m00s [130/169] tpm2-tss-0:4.1.3-8.fc43.s390x 100% | 1.9 MiB/s | 421.8 KiB | 00m00s [131/169] libassuan-0:2.5.7-4.fc43.s390 100% | 329.0 KiB/s | 67.1 KiB | 00m00s [132/169] libgcrypt-0:1.11.1-2.fc43.s39 100% | 2.6 MiB/s | 565.2 KiB | 00m00s [133/169] libgpg-error-0:1.55-2.fc43.s3 100% | 1.2 MiB/s | 242.6 KiB | 00m00s [134/169] npth-0:1.8-3.fc43.s390x 100% | 118.7 KiB/s | 24.8 KiB | 00m00s [135/169] libksba-0:1.6.7-4.fc43.s390x 100% | 797.0 KiB/s | 162.6 KiB | 00m00s [136/169] gnutls-0:3.8.10-3.fc43.s390x 100% | 6.1 MiB/s | 1.3 MiB | 00m00s [137/169] nettle-0:3.10.1-2.fc43.s390x 100% | 2.1 MiB/s | 451.3 KiB | 00m00s [138/169] openldap-0:2.6.10-3.fc43.s390 100% | 867.3 KiB/s | 261.9 KiB | 00m00s [139/169] gmp-1:6.3.0-4.fc43.s390x 100% | 1.6 MiB/s | 329.3 KiB | 00m00s [140/169] mpfr-0:4.2.2-2.fc43.s390x 100% | 1.4 MiB/s | 300.1 KiB | 00m00s [141/169] elfutils-default-yama-scope-0 100% | 60.9 KiB/s | 12.4 KiB | 00m00s [142/169] json-c-0:0.18-7.fc43.s390x 100% | 211.2 KiB/s | 44.6 KiB | 00m00s [143/169] libffi-0:3.5.1-2.fc43.s390x 100% | 194.4 KiB/s | 38.7 KiB | 00m00s [144/169] p11-kit-0:0.25.5-9.fc43.s390x 100% | 2.4 MiB/s | 516.0 KiB | 00m00s [145/169] p11-kit-trust-0:0.25.5-9.fc43 100% | 691.6 KiB/s | 141.8 KiB | 00m00s [146/169] libusb1-0:1.0.29-2.fc43.s390x 100% | 376.5 KiB/s | 77.2 KiB | 00m00s [147/169] libtasn1-0:4.20.0-2.fc43.s390 100% | 373.2 KiB/s | 78.0 KiB | 00m00s [148/169] libevent-0:2.1.12-16.fc43.s39 100% | 1.2 MiB/s | 259.9 KiB | 00m00s [149/169] cyrus-sasl-lib-0:2.1.28-33.fc 100% | 2.6 MiB/s | 817.3 KiB | 00m00s [150/169] libtool-ltdl-0:2.5.4-7.fc43.s 100% | 178.2 KiB/s | 36.5 KiB | 00m00s [151/169] libidn2-0:2.3.8-2.fc43.s390x 100% | 807.8 KiB/s | 171.3 KiB | 00m00s [152/169] libunistring-0:1.1-10.fc43.s3 100% | 2.6 MiB/s | 554.6 KiB | 00m00s [153/169] gdbm-libs-1:1.23-10.fc43.s390 100% | 272.5 KiB/s | 57.8 KiB | 00m00s [154/169] fedora-release-0:43-0.19.noar 100% | 69.9 KiB/s | 14.3 KiB | 00m00s [155/169] systemd-standalone-sysusers-0 100% | 670.9 KiB/s | 136.2 KiB | 00m00s [156/169] xxhash-libs-0:0.8.3-3.fc43.s3 100% | 176.4 KiB/s | 36.7 KiB | 00m00s [157/169] fedora-release-identity-basic 100% | 75.1 KiB/s | 15.1 KiB | 00m00s [158/169] gdb-minimal-0:16.3-4.fc43.s39 100% | 14.6 MiB/s | 4.6 MiB | 00m00s [159/169] libcurl-0:8.15.0-2.fc43.s390x 100% | 2.0 MiB/s | 414.3 KiB | 00m00s [160/169] libnghttp2-0:1.66.0-2.fc43.s3 100% | 359.8 KiB/s | 74.8 KiB | 00m00s [161/169] krb5-libs-0:1.21.3-7.fc43.s39 100% | 2.5 MiB/s | 775.2 KiB | 00m00s [162/169] libbrotli-0:1.1.0-8.fc43.s390 100% | 1.8 MiB/s | 381.1 KiB | 00m00s [163/169] libpsl-0:0.21.5-6.fc43.s390x 100% | 312.3 KiB/s | 65.3 KiB | 00m00s [164/169] libssh-0:0.11.2-2.fc43.s390x 100% | 1.1 MiB/s | 230.0 KiB | 00m00s [165/169] libssh-config-0:0.11.2-2.fc43 100% | 42.6 KiB/s | 8.9 KiB | 00m00s [166/169] keyutils-libs-0:1.6.3-6.fc43. 100% | 154.5 KiB/s | 31.2 KiB | 00m00s [167/169] libcom_err-0:1.47.3-2.fc43.s3 100% | 131.1 KiB/s | 26.7 KiB | 00m00s [168/169] libverto-0:0.3.2-11.fc43.s390 100% | 98.6 KiB/s | 20.5 KiB | 00m00s [169/169] publicsuffix-list-dafsa-0:202 100% | 292.8 KiB/s | 59.2 KiB | 00m00s -------------------------------------------------------------------------------- [169/169] Total 100% | 4.5 MiB/s | 59.0 MiB | 00m13s Running transaction [ 1/171] Verify package files 100% | 800.0 B/s | 169.0 B | 00m00s [ 2/171] Prepare transaction 100% | 3.1 KiB/s | 169.0 B | 00m00s [ 3/171] Installing libgcc-0:15.1.1-5. 100% | 166.9 MiB/s | 170.9 KiB | 00m00s [ 4/171] Installing publicsuffix-list- 100% | 0.0 B/s | 69.8 KiB | 00m00s [ 5/171] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/171] Installing fedora-release-ide 100% | 0.0 B/s | 920.0 B | 00m00s [ 7/171] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/171] Installing fedora-gpg-keys-0: 100% | 42.9 MiB/s | 175.9 KiB | 00m00s [ 9/171] Installing fedora-repos-0:43- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/171] Installing fedora-release-com 100% | 24.2 MiB/s | 24.8 KiB | 00m00s [ 11/171] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/171] Installing setup-0:2.15.0-26. 100% | 51.0 MiB/s | 730.6 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/171] Installing filesystem-0:3.18- 100% | 2.4 MiB/s | 212.8 KiB | 00m00s [ 14/171] Installing pcre2-syntax-0:10. 100% | 269.9 MiB/s | 276.4 KiB | 00m00s [ 15/171] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 16/171] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [ 17/171] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [ 18/171] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [ 19/171] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [ 20/171] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [ 21/171] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [ 22/171] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [ 23/171] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [ 24/171] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 25/171] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [ 26/171] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [ 27/171] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 28/171] Installing ncurses-base-0:6.5 100% | 86.3 MiB/s | 353.5 KiB | 00m00s [ 29/171] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 30/171] Installing ncurses-libs-0:6.5 100% | 201.3 MiB/s | 1.0 MiB | 00m00s [ 31/171] Installing glibc-0:2.42-2.fc4 100% | 153.0 MiB/s | 5.2 MiB | 00m00s [ 32/171] Installing bash-0:5.3.0-2.fc4 100% | 239.4 MiB/s | 8.6 MiB | 00m00s [ 33/171] Installing glibc-common-0:2.4 100% | 60.0 MiB/s | 1.1 MiB | 00m00s [ 34/171] Installing glibc-gconv-extra- 100% | 195.4 MiB/s | 6.8 MiB | 00m00s [ 35/171] Installing zlib-ng-compat-0:2 100% | 107.4 MiB/s | 109.9 KiB | 00m00s [ 36/171] Installing bzip2-libs-0:1.0.8 100% | 83.5 MiB/s | 85.5 KiB | 00m00s [ 37/171] Installing libgpg-error-0:1.5 100% | 57.2 MiB/s | 936.7 KiB | 00m00s [ 38/171] Installing libstdc++-0:15.1.1 100% | 287.3 MiB/s | 3.2 MiB | 00m00s [ 39/171] Installing xz-libs-1:5.8.1-2. 100% | 217.2 MiB/s | 222.4 KiB | 00m00s [ 40/171] Installing libassuan-0:2.5.7- 100% | 161.5 MiB/s | 165.4 KiB | 00m00s [ 41/171] Installing libgcrypt-0:1.11.1 100% | 249.0 MiB/s | 1.2 MiB | 00m00s [ 42/171] Installing libuuid-0:2.41.1-1 100% | 0.0 B/s | 34.3 KiB | 00m00s [ 43/171] Installing readline-0:8.3-2.f 100% | 282.0 MiB/s | 577.5 KiB | 00m00s [ 44/171] Installing gmp-1:6.3.0-4.fc43 100% | 252.6 MiB/s | 776.1 KiB | 00m00s [ 45/171] Installing popt-0:1.19-9.fc43 100% | 71.8 MiB/s | 147.1 KiB | 00m00s [ 46/171] Installing npth-0:1.8-3.fc43. 100% | 0.0 B/s | 46.3 KiB | 00m00s [ 47/171] Installing libblkid-0:2.41.1- 100% | 276.6 MiB/s | 283.3 KiB | 00m00s [ 48/171] Installing libxcrypt-0:4.4.38 100% | 142.0 MiB/s | 290.9 KiB | 00m00s [ 49/171] Installing libzstd-0:1.5.7-2. 100% | 285.4 MiB/s | 876.7 KiB | 00m00s [ 50/171] Installing elfutils-libelf-0: 100% | 294.5 MiB/s | 1.2 MiB | 00m00s [ 51/171] Installing sqlite-libs-0:3.50 100% | 239.0 MiB/s | 1.7 MiB | 00m00s [ 52/171] Installing gnupg2-gpgconf-0:2 100% | 11.5 MiB/s | 271.5 KiB | 00m00s [ 53/171] Installing crypto-policies-0: 100% | 24.0 MiB/s | 172.0 KiB | 00m00s [ 54/171] Installing libattr-0:2.5.2-6. 100% | 24.6 MiB/s | 25.1 KiB | 00m00s [ 55/171] Installing libacl-0:2.3.2-4.f 100% | 35.6 MiB/s | 36.5 KiB | 00m00s [ 56/171] Installing libtasn1-0:4.20.0- 100% | 92.7 MiB/s | 189.9 KiB | 00m00s [ 57/171] Installing libunistring-0:1.1 100% | 196.1 MiB/s | 1.8 MiB | 00m00s [ 58/171] Installing libidn2-0:2.3.8-2. 100% | 111.4 MiB/s | 570.4 KiB | 00m00s [ 59/171] Installing dwz-0:0.16-2.fc43. 100% | 20.3 MiB/s | 311.8 KiB | 00m00s [ 60/171] Installing gnupg2-verify-0:2. 100% | 25.5 MiB/s | 365.6 KiB | 00m00s [ 61/171] Installing mpfr-0:4.2.2-2.fc4 100% | 228.2 MiB/s | 701.2 KiB | 00m00s [ 62/171] Installing gawk-0:5.3.2-2.fc4 100% | 98.6 MiB/s | 1.9 MiB | 00m00s [ 63/171] Installing libksba-0:1.6.7-4. 100% | 201.6 MiB/s | 412.9 KiB | 00m00s [ 64/171] Installing unzip-0:6.0-67.fc4 100% | 27.7 MiB/s | 397.0 KiB | 00m00s [ 65/171] Installing file-libs-0:5.46-6 100% | 539.1 MiB/s | 11.9 MiB | 00m00s [ 66/171] Installing file-0:5.46-6.fc43 100% | 7.6 MiB/s | 101.5 KiB | 00m00s [ 67/171] Installing libsmartcols-0:2.4 100% | 188.7 MiB/s | 193.2 KiB | 00m00s [ 68/171] Installing libsepol-0:3.9-2.f 100% | 278.2 MiB/s | 854.5 KiB | 00m00s [ 69/171] Installing libcap-ng-0:0.8.5- 100% | 60.8 MiB/s | 62.3 KiB | 00m00s [ 70/171] Installing audit-libs-0:4.1.1 100% | 195.7 MiB/s | 400.8 KiB | 00m00s [ 71/171] Installing libeconf-0:0.7.9-2 100% | 64.8 MiB/s | 66.3 KiB | 00m00s [ 72/171] Installing pam-libs-0:1.7.1-3 100% | 121.6 MiB/s | 124.5 KiB | 00m00s [ 73/171] Installing libcap-0:2.76-2.fc 100% | 15.1 MiB/s | 216.2 KiB | 00m00s [ 74/171] Installing systemd-libs-0:257 100% | 252.0 MiB/s | 2.3 MiB | 00m00s [ 75/171] Installing lua-libs-0:5.4.8-2 100% | 310.5 MiB/s | 317.9 KiB | 00m00s [ 76/171] Installing alternatives-0:1.3 100% | 5.2 MiB/s | 63.5 KiB | 00m00s [ 77/171] Installing pcre2-0:10.45-1.fc 100% | 233.9 MiB/s | 718.4 KiB | 00m00s [ 78/171] Installing libselinux-0:3.9-2 100% | 205.2 MiB/s | 210.1 KiB | 00m00s [ 79/171] Installing grep-0:3.12-2.fc43 100% | 59.6 MiB/s | 1.0 MiB | 00m00s [ 80/171] Installing findutils-1:4.10.0 100% | 104.5 MiB/s | 1.9 MiB | 00m00s [ 81/171] Installing sed-0:4.9-5.fc43.s 100% | 53.3 MiB/s | 873.2 KiB | 00m00s [ 82/171] Installing xz-1:5.8.1-2.fc43. 100% | 74.2 MiB/s | 1.3 MiB | 00m00s [ 83/171] Installing libmount-0:2.41.1- 100% | 190.1 MiB/s | 389.2 KiB | 00m00s [ 84/171] Installing lz4-libs-0:1.10.0- 100% | 197.6 MiB/s | 202.3 KiB | 00m00s [ 85/171] Installing json-c-0:0.18-7.fc 100% | 81.7 MiB/s | 83.6 KiB | 00m00s [ 86/171] Installing libffi-0:3.5.1-2.f 100% | 78.7 MiB/s | 80.6 KiB | 00m00s [ 87/171] Installing p11-kit-0:0.25.5-9 100% | 113.3 MiB/s | 2.5 MiB | 00m00s [ 88/171] Installing p11-kit-trust-0:0. 100% | 19.7 MiB/s | 464.5 KiB | 00m00s [ 89/171] Installing zstd-0:1.5.7-2.fc4 100% | 102.3 MiB/s | 1.8 MiB | 00m00s [ 90/171] Installing util-linux-core-0: 100% | 71.4 MiB/s | 1.4 MiB | 00m00s [ 91/171] Installing tar-2:1.35-6.fc43. 100% | 137.3 MiB/s | 3.0 MiB | 00m00s [ 92/171] Installing libsemanage-0:3.9- 100% | 306.4 MiB/s | 313.8 KiB | 00m00s [ 93/171] Installing systemd-standalone 100% | 21.2 MiB/s | 281.9 KiB | 00m00s [ 94/171] Installing libusb1-0:1.0.29-2 100% | 168.2 MiB/s | 172.3 KiB | 00m00s [ 95/171] Installing zip-0:3.0-44.fc43. 100% | 47.8 MiB/s | 733.5 KiB | 00m00s [ 96/171] Installing gnupg2-keyboxd-0:2 100% | 25.7 MiB/s | 210.4 KiB | 00m00s [ 97/171] Installing libpsl-0:0.21.5-6. 100% | 75.5 MiB/s | 77.3 KiB | 00m00s [ 98/171] Installing liblastlog2-0:2.41 100% | 5.0 MiB/s | 35.6 KiB | 00m00s [ 99/171] Installing libfdisk-0:2.41.1- 100% | 193.3 MiB/s | 395.9 KiB | 00m00s [100/171] Installing nettle-0:3.10.1-2. 100% | 271.1 MiB/s | 832.8 KiB | 00m00s [101/171] Installing gnutls-0:3.8.10-3. 100% | 271.7 MiB/s | 3.5 MiB | 00m00s [102/171] Installing libxml2-0:2.12.10- 100% | 93.0 MiB/s | 1.9 MiB | 00m00s [103/171] Installing bzip2-0:1.0.8-21.f 100% | 6.9 MiB/s | 91.4 KiB | 00m00s [104/171] Installing add-determinism-0: 100% | 130.3 MiB/s | 2.7 MiB | 00m00s [105/171] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [106/171] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [107/171] Installing ed-0:1.22-2.fc43.s 100% | 11.2 MiB/s | 149.1 KiB | 00m00s [108/171] Installing patch-0:2.8-2.fc43 100% | 18.0 MiB/s | 239.8 KiB | 00m00s [109/171] Installing elfutils-default-y 100% | 340.5 KiB/s | 2.0 KiB | 00m00s [110/171] Installing elfutils-libs-0:0. 100% | 189.5 MiB/s | 776.1 KiB | 00m00s [111/171] Installing cpio-0:2.15-6.fc43 100% | 61.9 MiB/s | 1.1 MiB | 00m00s [112/171] Installing diffutils-0:3.12-3 100% | 83.6 MiB/s | 1.6 MiB | 00m00s [113/171] Installing libgomp-0:15.1.1-5 100% | 267.6 MiB/s | 548.1 KiB | 00m00s [114/171] Installing jansson-0:2.14-3.f 100% | 88.1 MiB/s | 90.2 KiB | 00m00s [115/171] Installing libpkgconf-0:2.3.0 100% | 0.0 B/s | 82.9 KiB | 00m00s [116/171] Installing pkgconf-0:2.3.0-3. 100% | 6.8 MiB/s | 90.7 KiB | 00m00s [117/171] Installing pkgconf-pkg-config 100% | 147.8 KiB/s | 1.8 KiB | 00m00s [118/171] Installing libtool-ltdl-0:2.5 100% | 0.0 B/s | 70.9 KiB | 00m00s [119/171] Installing gdbm-libs-1:1.23-1 100% | 124.1 MiB/s | 127.1 KiB | 00m00s [120/171] Installing cyrus-sasl-lib-0:2 100% | 117.8 MiB/s | 2.4 MiB | 00m00s [121/171] Installing xxhash-libs-0:0.8. 100% | 0.0 B/s | 67.1 KiB | 00m00s [122/171] Installing libnghttp2-0:1.66. 100% | 162.9 MiB/s | 166.8 KiB | 00m00s [123/171] Installing libbrotli-0:1.1.0- 100% | 224.4 MiB/s | 918.9 KiB | 00m00s [124/171] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 51.5 KiB | 00m00s [125/171] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 60.0 KiB | 00m00s [126/171] Installing libverto-0:0.3.2-1 100% | 26.3 MiB/s | 26.9 KiB | 00m00s [127/171] Installing coreutils-common-0 100% | 322.6 MiB/s | 11.3 MiB | 00m00s [128/171] Installing openssl-libs-1:3.5 100% | 281.0 MiB/s | 7.3 MiB | 00m00s [129/171] Installing coreutils-0:9.7-5. 100% | 143.6 MiB/s | 5.7 MiB | 00m00s [130/171] Installing ca-certificates-0: 100% | 1.7 MiB/s | 2.4 MiB | 00m01s [131/171] Installing libarchive-0:3.8.1 100% | 203.3 MiB/s | 1.0 MiB | 00m00s [132/171] Installing krb5-libs-0:1.21.3 100% | 219.4 MiB/s | 2.4 MiB | 00m00s [133/171] Installing tpm2-tss-0:4.1.3-8 100% | 226.9 MiB/s | 1.6 MiB | 00m00s [134/171] Installing gnupg2-gpg-agent-0 100% | 28.2 MiB/s | 722.3 KiB | 00m00s [135/171] Installing ima-evm-utils-libs 100% | 56.4 MiB/s | 57.8 KiB | 00m00s [136/171] Installing libssh-0:0.11.2-2. 100% | 190.3 MiB/s | 584.5 KiB | 00m00s [137/171] Installing gzip-0:1.13-4.fc43 100% | 26.2 MiB/s | 402.1 KiB | 00m00s [138/171] Installing rpm-sequoia-0:1.9. 100% | 262.9 MiB/s | 2.6 MiB | 00m00s [139/171] Installing rpm-libs-0:5.99.91 100% | 245.3 MiB/s | 1.0 MiB | 00m00s [140/171] Installing libfsverity-0:1.6- 100% | 0.0 B/s | 25.2 KiB | 00m00s [141/171] Installing libevent-0:2.1.12- 100% | 298.8 MiB/s | 917.9 KiB | 00m00s [142/171] Installing openldap-0:2.6.10- 100% | 164.3 MiB/s | 673.1 KiB | 00m00s [143/171] Installing libcurl-0:8.15.0-2 100% | 231.5 MiB/s | 948.1 KiB | 00m00s [144/171] Installing elfutils-debuginfo 100% | 5.8 MiB/s | 77.8 KiB | 00m00s [145/171] Installing elfutils-0:0.193-3 100% | 135.3 MiB/s | 3.0 MiB | 00m00s [146/171] Installing binutils-0:2.45-1. 100% | 267.4 MiB/s | 28.1 MiB | 00m00s [147/171] Installing gdb-minimal-0:16.3 100% | 238.1 MiB/s | 15.2 MiB | 00m00s [148/171] Installing debugedit-0:5.2-2. 100% | 15.3 MiB/s | 204.0 KiB | 00m00s [149/171] Installing curl-0:8.15.0-2.fc 100% | 20.5 MiB/s | 504.2 KiB | 00m00s [150/171] Installing rpm-0:5.99.91-3.fc 100% | 65.3 MiB/s | 2.5 MiB | 00m00s [151/171] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [152/171] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.1 KiB | 00m00s [153/171] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [154/171] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 9.3 KiB | 00m00s [155/171] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [156/171] Installing gnupg2-dirmngr-0:2 100% | 29.5 MiB/s | 664.4 KiB | 00m00s [157/171] Installing gnupg2-0:2.4.8-4.f 100% | 184.7 MiB/s | 6.6 MiB | 00m00s [158/171] Installing rpm-sign-libs-0:5. 100% | 0.0 B/s | 36.3 KiB | 00m00s [159/171] Installing rpm-build-libs-0:5 100% | 270.2 MiB/s | 276.7 KiB | 00m00s [160/171] Installing gpgverify-0:2.2-3. 100% | 0.0 B/s | 9.4 KiB | 00m00s [161/171] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [162/171] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [163/171] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.7 KiB | 00m00s [164/171] Installing python-srpm-macros 100% | 0.0 B/s | 52.8 KiB | 00m00s [165/171] Installing redhat-rpm-config- 100% | 92.4 MiB/s | 189.3 KiB | 00m00s [166/171] Installing rpm-build-0:5.99.9 100% | 18.8 MiB/s | 288.3 KiB | 00m00s [167/171] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [168/171] Installing util-linux-0:2.41. 100% | 90.0 MiB/s | 3.4 MiB | 00m00s [169/171] Installing which-0:2.23-3.fc4 100% | 6.0 MiB/s | 85.4 KiB | 00m00s [170/171] Installing shadow-utils-2:4.1 100% | 122.4 MiB/s | 4.0 MiB | 00m00s [171/171] Installing info-0:7.2-6.fc43. 100% | 226.8 KiB/s | 397.4 KiB | 00m02s Warning: skipped OpenPGP checks for 169 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.6.0-2.fc43.s390x alternatives-1.33-2.fc43.s390x ansible-srpm-macros-1-18.1.fc43.noarch audit-libs-4.1.1-1.fc43.s390x bash-5.3.0-2.fc43.s390x binutils-2.45-1.fc43.s390x build-reproducibility-srpm-macros-0.6.0-2.fc43.noarch bzip2-1.0.8-21.fc43.s390x bzip2-libs-1.0.8-21.fc43.s390x ca-certificates-2024.2.69_v8.0.401-7.fc43.noarch coreutils-9.7-5.fc43.s390x coreutils-common-9.7-5.fc43.s390x cpio-2.15-6.fc43.s390x crypto-policies-20250714-3.gitcd6043a.fc43.noarch curl-8.15.0-2.fc43.s390x cyrus-sasl-lib-2.1.28-33.fc43.s390x debugedit-5.2-2.fc43.s390x diffutils-3.12-3.fc43.s390x dwz-0.16-2.fc43.s390x ed-1.22-2.fc43.s390x efi-srpm-macros-6-4.fc43.noarch elfutils-0.193-3.fc43.s390x elfutils-debuginfod-client-0.193-3.fc43.s390x elfutils-default-yama-scope-0.193-3.fc43.noarch elfutils-libelf-0.193-3.fc43.s390x elfutils-libs-0.193-3.fc43.s390x fedora-gpg-keys-43-0.2.noarch fedora-release-43-0.19.noarch fedora-release-common-43-0.19.noarch fedora-release-identity-basic-43-0.19.noarch fedora-repos-43-0.2.noarch fedora-repos-rawhide-43-0.2.noarch file-5.46-6.fc43.s390x file-libs-5.46-6.fc43.s390x filesystem-3.18-50.fc43.s390x filesystem-srpm-macros-3.18-50.fc43.noarch findutils-4.10.0-6.fc43.s390x fonts-srpm-macros-2.0.5-23.fc43.noarch forge-srpm-macros-0.4.0-3.fc43.noarch fpc-srpm-macros-1.3-15.fc43.noarch gawk-5.3.2-2.fc43.s390x gdb-minimal-16.3-4.fc43.s390x gdbm-libs-1.23-10.fc43.s390x ghc-srpm-macros-1.9.2-3.fc43.noarch glibc-2.42-2.fc43.s390x glibc-common-2.42-2.fc43.s390x glibc-gconv-extra-2.42-2.fc43.s390x glibc-minimal-langpack-2.42-2.fc43.s390x gmp-6.3.0-4.fc43.s390x gnat-srpm-macros-6-8.fc43.noarch gnupg2-2.4.8-4.fc43.s390x gnupg2-dirmngr-2.4.8-4.fc43.s390x gnupg2-gpg-agent-2.4.8-4.fc43.s390x gnupg2-gpgconf-2.4.8-4.fc43.s390x gnupg2-keyboxd-2.4.8-4.fc43.s390x gnupg2-verify-2.4.8-4.fc43.s390x gnutls-3.8.10-3.fc43.s390x go-srpm-macros-3.7.0-4.fc43.noarch gpgverify-2.2-3.fc43.noarch grep-3.12-2.fc43.s390x gzip-1.13-4.fc43.s390x ima-evm-utils-libs-1.6.2-6.fc43.s390x info-7.2-6.fc43.s390x jansson-2.14-3.fc43.s390x java-srpm-macros-1-7.fc43.noarch json-c-0.18-7.fc43.s390x kernel-srpm-macros-1.0-27.fc43.noarch keyutils-libs-1.6.3-6.fc43.s390x krb5-libs-1.21.3-7.fc43.s390x libacl-2.3.2-4.fc43.s390x libarchive-3.8.1-3.fc43.s390x libassuan-2.5.7-4.fc43.s390x libattr-2.5.2-6.fc43.s390x libblkid-2.41.1-15.fc43.s390x libbrotli-1.1.0-8.fc43.s390x libcap-2.76-2.fc43.s390x libcap-ng-0.8.5-6.fc43.s390x libcom_err-1.47.3-2.fc43.s390x libcurl-8.15.0-2.fc43.s390x libeconf-0.7.9-2.fc43.s390x libevent-2.1.12-16.fc43.s390x libfdisk-2.41.1-15.fc43.s390x libffi-3.5.1-2.fc43.s390x libfsverity-1.6-3.fc43.s390x libgcc-15.1.1-5.fc43.1.s390x libgcrypt-1.11.1-2.fc43.s390x libgomp-15.1.1-5.fc43.1.s390x libgpg-error-1.55-2.fc43.s390x libidn2-2.3.8-2.fc43.s390x libksba-1.6.7-4.fc43.s390x liblastlog2-2.41.1-15.fc43.s390x libmount-2.41.1-15.fc43.s390x libnghttp2-1.66.0-2.fc43.s390x libpkgconf-2.3.0-3.fc43.s390x libpsl-0.21.5-6.fc43.s390x libselinux-3.9-2.fc43.s390x libsemanage-3.9-2.fc43.s390x libsepol-3.9-2.fc43.s390x libsmartcols-2.41.1-15.fc43.s390x libssh-0.11.2-2.fc43.s390x libssh-config-0.11.2-2.fc43.noarch libstdc++-15.1.1-5.fc43.1.s390x libtasn1-4.20.0-2.fc43.s390x libtool-ltdl-2.5.4-7.fc43.s390x libunistring-1.1-10.fc43.s390x libusb1-1.0.29-2.fc43.s390x libuuid-2.41.1-15.fc43.s390x libverto-0.3.2-11.fc43.s390x libxcrypt-4.4.38-8.fc43.s390x libxml2-2.12.10-3.fc43.s390x libzstd-1.5.7-2.fc43.s390x lua-libs-5.4.8-2.fc43.s390x lua-srpm-macros-1-16.fc43.noarch lz4-libs-1.10.0-3.fc43.s390x mpfr-4.2.2-2.fc43.s390x ncurses-base-6.5-7.20250614.fc43.noarch ncurses-libs-6.5-7.20250614.fc43.s390x nettle-3.10.1-2.fc43.s390x npth-1.8-3.fc43.s390x ocaml-srpm-macros-11-2.fc43.noarch openblas-srpm-macros-2-20.fc43.noarch openldap-2.6.10-3.fc43.s390x openssl-libs-3.5.1-2.fc43.s390x p11-kit-0.25.5-9.fc43.s390x p11-kit-trust-0.25.5-9.fc43.s390x package-notes-srpm-macros-0.5-14.fc43.noarch pam-libs-1.7.1-3.fc43.s390x patch-2.8-2.fc43.s390x pcre2-10.45-1.fc43.1.s390x pcre2-syntax-10.45-1.fc43.1.noarch perl-srpm-macros-1-60.fc43.noarch pkgconf-2.3.0-3.fc43.s390x pkgconf-m4-2.3.0-3.fc43.noarch pkgconf-pkg-config-2.3.0-3.fc43.s390x popt-1.19-9.fc43.s390x publicsuffix-list-dafsa-20250616-2.fc43.noarch pyproject-srpm-macros-1.18.3-2.fc43.noarch python-srpm-macros-3.14-4.fc43.noarch qt5-srpm-macros-5.15.17-2.fc43.noarch qt6-srpm-macros-6.9.1-2.fc43.noarch readline-8.3-2.fc43.s390x redhat-rpm-config-343-10.fc43.noarch rpm-5.99.91-3.fc43.s390x rpm-build-5.99.91-3.fc43.s390x rpm-build-libs-5.99.91-3.fc43.s390x rpm-libs-5.99.91-3.fc43.s390x rpm-sequoia-1.9.0-2.fc43.s390x rpm-sign-libs-5.99.91-3.fc43.s390x rust-srpm-macros-26.3-5.fc43.noarch sed-4.9-5.fc43.s390x setup-2.15.0-26.fc43.noarch shadow-utils-4.18.0-3.fc43.s390x sqlite-libs-3.50.2-2.fc43.s390x systemd-libs-257.7-1.fc43.s390x systemd-standalone-sysusers-257.7-1.fc43.s390x tar-1.35-6.fc43.s390x tpm2-tss-4.1.3-8.fc43.s390x tree-sitter-srpm-macros-0.4.2-1.fc43.noarch unzip-6.0-67.fc43.s390x util-linux-2.41.1-15.fc43.s390x util-linux-core-2.41.1-15.fc43.s390x which-2.23-3.fc43.s390x xxhash-libs-0.8.3-3.fc43.s390x xz-5.8.1-2.fc43.s390x xz-libs-5.8.1-2.fc43.s390x zig-srpm-macros-1-5.fc43.noarch zip-3.0-44.fc43.s390x zlib-ng-compat-2.2.5-1.fc43.s390x zstd-1.5.7-2.fc43.s390x Start: buildsrpm Start: rpmbuild -bs Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1754611200 Wrote: /builddir/build/SRPMS/ProDy-2.4.1-15.fc43.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-s390x-1754720849.198309/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-ieu9fe8w/ProDy/ProDy.spec) Config(child) 0 minutes 52 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/ProDy-2.4.1-15.fc43.src.rpm) Config(fedora-41-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-s390x-bootstrap-1754720849.198309/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-s390x-bootstrap-1754720849.198309/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-s390x-1754720849.198309/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.1-1.fc41.s390x rpm-sequoia-1.7.0-5.fc41.s390x dnf5-5.2.15.0-2.fc41.s390x dnf5-plugins-5.2.15.0-2.fc41.s390x Finish: chroot init Start: build phase for ProDy-2.4.1-15.fc43.src.rpm Start: build setup for ProDy-2.4.1-15.fc43.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1754611200 Wrote: /builddir/build/SRPMS/ProDy-2.4.1-15.fc43.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 7.4 KiB/s | 3.8 KiB | 00m01s Coprdir repository 100% | 2.9 KiB/s | 1.5 KiB | 00m01s Copr repository 100% | 3.0 KiB/s | 1.5 KiB | 00m01s fedora 100% | 3.7 KiB/s | 5.0 KiB | 00m01s updates 100% | 6.1 KiB/s | 6.0 KiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing: gcc s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.3 MiB gcc-c++ s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30.7 MiB pyproject-rpm-macros noarch 1.18.3-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 114.5 KiB python3-biopython s390x 1.85-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 24.5 MiB python3-devel s390x 3.14.0~rc1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB python3-matplotlib s390x 3.10.5-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31.6 MiB python3-numpy s390x 1:2.3.2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.7 MiB python3-scipy s390x 1.15.3-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 71.7 MiB python3-setuptools noarch 78.1.1-10.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.0 MiB python3-urllib3 noarch 2.4.0-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-15.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB annobin-docs noarch 12.99-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 98.9 KiB annobin-plugin-gcc s390x 12.99-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB cairo s390x 1.18.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB cpp s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 27.2 MiB default-fonts-core-sans noarch 4.2-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.9 KiB dejavu-sans-fonts noarch 2.37-26.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.5 MiB expat s390x 2.7.1-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 313.7 KiB flex s390x 2.6.4-20.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 913.0 KiB flexiblas s390x 3.4.5-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50.4 KiB flexiblas-netlib s390x 3.4.5-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12.5 MiB flexiblas-openblas-openmp s390x 3.4.5-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.0 KiB fontconfig s390x 2.17.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 779.7 KiB fonts-filesystem noarch 1:2.0.5-23.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B freetype s390x 2.13.3-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 922.4 KiB fribidi s390x 1.0.16-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 193.8 KiB gcc-plugin-annobin s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 56.8 KiB glib2 s390x 2.85.2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.0 MiB glibc-devel s390x 2.42-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.6 MiB google-noto-fonts-common noarch 20250801-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17.7 KiB google-noto-sans-vf-fonts noarch 20250801-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB graphite2 s390x 1.3.14-19.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 203.1 KiB harfbuzz s390x 11.3.3-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB jbigkit-libs s390x 2.1-32.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 116.9 KiB kernel-headers s390x 6.16.0-65.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.7 MiB lcms2 s390x 2.16-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 452.6 KiB libX11 s390x 1.8.12-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB libX11-common noarch 1.8.12-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB libXau s390x 1.0.12-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.7 KiB libXext s390x 1.3.6-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93.6 KiB libXrender s390x 0.9.12-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45.8 KiB libasan s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB libatomic s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.3 KiB libgfortran s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB libimagequant s390x 4.0.3-8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 834.2 KiB libjpeg-turbo s390x 3.1.1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 774.1 KiB liblerc s390x 4.0.0-9.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 257.1 KiB libmpc s390x 1.3.1-8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 160.4 KiB libpng s390x 2:1.6.50-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 249.6 KiB libqhull_r s390x 1:8.0.2-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 491.1 KiB libraqm s390x 0.10.1-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 32.4 KiB libstdc++-devel s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.1 MiB libtiff s390x 4.7.0-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 665.5 KiB libubsan s390x 15.1.1-5.fc43.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 495.6 KiB libwebp s390x 1.6.0-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 723.7 KiB libxcb s390x 1.17.0-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB libxcrypt-devel s390x 4.4.38-8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30.8 KiB lzo s390x 2.10-15.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 198.7 KiB m4 s390x 1.4.20-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 871.1 KiB make s390x 1:4.4.1-11.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB mpdecimal s390x 4.0.1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 237.0 KiB openblas s390x 0.3.29-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 111.7 KiB openblas-openmp s390x 0.3.29-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.2 MiB openjpeg s390x 2.5.3-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 483.6 KiB pixman s390x 0.46.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 568.4 KiB python-pip-wheel noarch 25.1.1-14.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python-rpm-macros noarch 3.14-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.8 KiB python3 s390x 3.14.0~rc1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 24.7 KiB python3-cairo s390x 1.28.0-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 520.4 KiB python3-charset-normalizer noarch 3.4.2-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 354.0 KiB python3-contourpy s390x 1.3.3-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 858.2 KiB python3-cycler noarch 0.11.0-17.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.8 KiB python3-dateutil noarch 1:2.9.0.post0-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 877.6 KiB python3-fonttools s390x 4.59.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18.9 MiB python3-idna noarch 3.10-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 730.6 KiB python3-kiwisolver s390x 1.4.8-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 161.0 KiB python3-libs s390x 3.14.0~rc1-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43.2 MiB python3-matplotlib-data-fonts s390x 3.10.5-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.9 MiB python3-numpy-f2py s390x 1:2.3.2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB python3-olefile noarch 0.47-9.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 346.5 KiB python3-packaging noarch 25.0-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 607.5 KiB python3-pillow s390x 11.3.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.3 MiB python3-platformdirs noarch 4.2.2-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 177.6 KiB python3-pooch noarch 1.8.2-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 635.3 KiB python3-pyparsing noarch 3.1.2-12.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB python3-requests noarch 2.32.4-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 478.2 KiB python3-rpm-generators noarch 14-13.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.7 KiB python3-rpm-macros noarch 3.14-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.5 KiB python3-six noarch 1.17.0-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 118.0 KiB tzdata noarch 2025b-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB xml-common noarch 0.6.3-67.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB Transaction Summary: Installing: 91 packages Total size of inbound packages is 146 MiB. Need to download 146 MiB. After this operation, 527 MiB extra will be used (install 527 MiB, remove 0 B). [ 1/91] pyproject-rpm-macros-0:1.18.3-2 100% | 62.7 KiB/s | 44.3 KiB | 00m01s [ 2/91] python3-biopython-0:1.85-3.fc43 100% | 7.8 MiB/s | 6.2 MiB | 00m01s [ 3/91] gcc-c++-0:15.1.1-5.fc43.1.s390x 100% | 8.1 MiB/s | 12.4 MiB | 00m02s [ 4/91] python3-devel-0:3.14.0~rc1-2.fc 100% | 1.8 MiB/s | 386.2 KiB | 00m00s [ 5/91] python3-matplotlib-0:3.10.5-1.f 100% | 18.8 MiB/s | 7.7 MiB | 00m00s [ 6/91] python3-numpy-1:2.3.2-1.fc43.s3 100% | 22.2 MiB/s | 7.1 MiB | 00m00s [ 7/91] gcc-0:15.1.1-5.fc43.1.s390x 100% | 15.0 MiB/s | 32.2 MiB | 00m02s [ 8/91] python3-setuptools-0:78.1.1-10. 100% | 8.6 MiB/s | 1.9 MiB | 00m00s [ 9/91] python3-urllib3-0:2.4.0-5.fc43. 100% | 1.3 MiB/s | 275.7 KiB | 00m00s [10/91] python3-scipy-0:1.15.3-4.fc43.s 100% | 27.0 MiB/s | 17.3 MiB | 00m01s [11/91] libstdc++-devel-0:15.1.1-5.fc43 100% | 16.5 MiB/s | 5.1 MiB | 00m00s [12/91] cpp-0:15.1.1-5.fc43.1.s390x 100% | 23.5 MiB/s | 10.2 MiB | 00m00s [13/91] python3-0:3.14.0~rc1-2.fc43.s39 100% | 133.8 KiB/s | 27.2 KiB | 00m00s [14/91] python3-contourpy-0:1.3.3-1.fc4 100% | 1.3 MiB/s | 274.7 KiB | 00m00s [15/91] python3-cycler-0:0.11.0-17.fc43 100% | 106.9 KiB/s | 21.7 KiB | 00m00s [16/91] python3-libs-0:3.14.0~rc1-2.fc4 100% | 22.2 MiB/s | 9.4 MiB | 00m00s [17/91] python3-dateutil-1:2.9.0.post0- 100% | 1.6 MiB/s | 333.6 KiB | 00m00s [18/91] python3-kiwisolver-0:1.4.8-4.fc 100% | 338.0 KiB/s | 69.0 KiB | 00m00s [19/91] python3-packaging-0:25.0-4.fc43 100% | 740.3 KiB/s | 151.0 KiB | 00m00s [20/91] python3-pillow-0:11.3.0-3.fc43. 100% | 4.8 MiB/s | 1.0 MiB | 00m00s [21/91] python3-pyparsing-0:3.1.2-12.fc 100% | 1.3 MiB/s | 279.6 KiB | 00m00s [22/91] python3-numpy-f2py-1:2.3.2-1.fc 100% | 2.2 MiB/s | 461.6 KiB | 00m00s [23/91] mpdecimal-0:4.0.1-2.fc43.s390x 100% | 518.6 KiB/s | 106.8 KiB | 00m00s [24/91] python3-six-0:1.17.0-5.fc43.noa 100% | 204.2 KiB/s | 41.7 KiB | 00m00s [25/91] python3-olefile-0:0.47-9.fc43.n 100% | 364.4 KiB/s | 74.7 KiB | 00m00s [26/91] python3-pooch-0:1.8.2-7.fc43.no 100% | 634.3 KiB/s | 126.9 KiB | 00m00s [27/91] python3-idna-0:3.10-4.fc43.noar 100% | 580.8 KiB/s | 118.5 KiB | 00m00s [28/91] python3-cairo-0:1.28.0-2.fc43.s 100% | 634.8 KiB/s | 128.9 KiB | 00m00s [29/91] python3-platformdirs-0:4.2.2-6. 100% | 214.1 KiB/s | 43.5 KiB | 00m00s [30/91] python3-requests-0:2.32.4-3.fc4 100% | 736.9 KiB/s | 150.3 KiB | 00m00s [31/91] python3-charset-normalizer-0:3. 100% | 535.1 KiB/s | 108.6 KiB | 00m00s [32/91] flexiblas-netlib-0:3.4.5-4.fc43 100% | 12.6 MiB/s | 3.8 MiB | 00m00s [33/91] flexiblas-0:3.4.5-4.fc43.s390x 100% | 127.0 KiB/s | 25.9 KiB | 00m00s [34/91] flexiblas-openblas-openmp-0:3.4 100% | 84.3 KiB/s | 17.0 KiB | 00m00s [35/91] libgfortran-0:15.1.1-5.fc43.1.s 100% | 3.0 MiB/s | 643.8 KiB | 00m00s [36/91] freetype-0:2.13.3-3.fc43.s390x 100% | 2.1 MiB/s | 440.0 KiB | 00m00s [37/91] lcms2-0:2.16-6.fc43.s390x 100% | 930.3 KiB/s | 188.9 KiB | 00m00s [38/91] libimagequant-0:4.0.3-8.fc43.s3 100% | 1.6 MiB/s | 346.4 KiB | 00m00s [39/91] libjpeg-turbo-0:3.1.1-2.fc43.s3 100% | 1.2 MiB/s | 252.9 KiB | 00m00s [40/91] libraqm-0:0.10.1-3.fc43.s390x 100% | 111.7 KiB/s | 22.6 KiB | 00m00s [41/91] libtiff-0:4.7.0-6.fc43.s390x 100% | 1.1 MiB/s | 240.3 KiB | 00m00s [42/91] libwebp-0:1.6.0-2.fc43.s390x 100% | 1.3 MiB/s | 281.9 KiB | 00m00s [43/91] libxcb-0:1.17.0-6.fc43.s390x 100% | 1.2 MiB/s | 241.8 KiB | 00m00s [44/91] openjpeg-0:2.5.3-7.fc43.s390x 100% | 1.0 MiB/s | 211.8 KiB | 00m00s [45/91] dejavu-sans-fonts-0:2.37-26.fc4 100% | 6.3 MiB/s | 1.3 MiB | 00m00s [46/91] libqhull_r-1:8.0.2-7.fc43.s390x 100% | 1.0 MiB/s | 204.0 KiB | 00m00s [47/91] python3-fonttools-0:4.59.0-3.fc 100% | 14.2 MiB/s | 3.0 MiB | 00m00s [48/91] python3-matplotlib-data-fonts-0 100% | 11.1 MiB/s | 2.3 MiB | 00m00s [49/91] expat-0:2.7.1-3.fc43.s390x 100% | 591.1 KiB/s | 119.4 KiB | 00m00s [50/91] python-pip-wheel-0:25.1.1-14.fc 100% | 5.8 MiB/s | 1.2 MiB | 00m00s [51/91] tzdata-0:2025b-3.fc43.noarch 100% | 2.1 MiB/s | 429.3 KiB | 00m00s [52/91] cairo-0:1.18.4-2.fc43.s390x 100% | 3.4 MiB/s | 730.0 KiB | 00m00s [53/91] flex-0:2.6.4-20.fc43.s390x 100% | 1.5 MiB/s | 313.2 KiB | 00m00s [54/91] python-rpm-macros-0:3.14-4.fc43 100% | 84.6 KiB/s | 17.2 KiB | 00m00s [55/91] python3-rpm-macros-0:3.14-4.fc4 100% | 58.4 KiB/s | 11.7 KiB | 00m00s [56/91] libXau-0:1.0.12-3.fc43.s390x 100% | 163.5 KiB/s | 33.2 KiB | 00m00s [57/91] jbigkit-libs-0:2.1-32.fc43.s390 100% | 273.2 KiB/s | 55.7 KiB | 00m00s [58/91] liblerc-0:4.0.0-9.fc43.s390x 100% | 554.0 KiB/s | 112.5 KiB | 00m00s [59/91] fribidi-0:1.0.16-3.fc43.s390x 100% | 275.3 KiB/s | 55.9 KiB | 00m00s [60/91] harfbuzz-0:11.3.3-2.fc43.s390x 100% | 5.6 MiB/s | 1.1 MiB | 00m00s [61/91] glib2-0:2.85.2-1.fc43.s390x 100% | 14.5 MiB/s | 3.1 MiB | 00m00s [62/91] graphite2-0:1.3.14-19.fc43.s390 100% | 493.9 KiB/s | 100.3 KiB | 00m00s [63/91] libmpc-0:1.3.1-8.fc43.s390x 100% | 357.2 KiB/s | 72.5 KiB | 00m00s [64/91] glibc-devel-0:2.42-2.fc43.s390x 100% | 2.6 MiB/s | 531.2 KiB | 00m00s [65/91] libasan-0:15.1.1-5.fc43.1.s390x 100% | 2.5 MiB/s | 529.4 KiB | 00m00s [66/91] libatomic-0:15.1.1-5.fc43.1.s39 100% | 199.1 KiB/s | 40.2 KiB | 00m00s [67/91] libubsan-0:15.1.1-5.fc43.1.s390 100% | 1.1 MiB/s | 235.9 KiB | 00m00s [68/91] make-1:4.4.1-11.fc43.s390x 100% | 2.9 MiB/s | 597.7 KiB | 00m00s [69/91] libpng-2:1.6.50-2.fc43.s390x 100% | 641.6 KiB/s | 130.9 KiB | 00m00s [70/91] openblas-openmp-0:0.3.29-2.fc43 100% | 14.0 MiB/s | 4.3 MiB | 00m00s [71/91] openblas-0:0.3.29-2.fc43.s390x 100% | 208.8 KiB/s | 42.2 KiB | 00m00s [72/91] m4-0:1.4.20-2.fc43.s390x 100% | 1.6 MiB/s | 335.1 KiB | 00m00s [73/91] fonts-filesystem-1:2.0.5-23.fc4 100% | 43.0 KiB/s | 8.7 KiB | 00m00s [74/91] fontconfig-0:2.17.0-3.fc43.s390 100% | 1.3 MiB/s | 266.1 KiB | 00m00s [75/91] libX11-0:1.8.12-1.fc43.s390x 100% | 3.2 MiB/s | 671.3 KiB | 00m00s [76/91] libX11-common-0:1.8.12-1.fc43.n 100% | 710.3 KiB/s | 144.9 KiB | 00m00s [77/91] libXext-0:1.3.6-4.fc43.s390x 100% | 191.4 KiB/s | 39.4 KiB | 00m00s [78/91] libXrender-0:0.9.12-3.fc43.s390 100% | 139.0 KiB/s | 28.1 KiB | 00m00s [79/91] lzo-0:2.10-15.fc43.s390x 100% | 375.4 KiB/s | 77.0 KiB | 00m00s [80/91] pixman-0:0.46.2-2.fc43.s390x 100% | 1.1 MiB/s | 226.9 KiB | 00m00s [81/91] kernel-headers-0:6.16.0-65.fc43 100% | 7.3 MiB/s | 1.5 MiB | 00m00s [82/91] libxcrypt-devel-0:4.4.38-8.fc43 100% | 142.4 KiB/s | 29.1 KiB | 00m00s [83/91] default-fonts-core-sans-0:4.2-5 100% | 117.8 KiB/s | 23.8 KiB | 00m00s [84/91] xml-common-0:0.6.3-67.fc43.noar 100% | 152.2 KiB/s | 31.0 KiB | 00m00s [85/91] abattis-cantarell-vf-fonts-0:0. 100% | 591.8 KiB/s | 120.1 KiB | 00m00s [86/91] google-noto-sans-vf-fonts-0:202 100% | 2.9 MiB/s | 614.5 KiB | 00m00s [87/91] google-noto-fonts-common-0:2025 100% | 84.8 KiB/s | 17.2 KiB | 00m00s [88/91] gcc-plugin-annobin-0:15.1.1-5.f 100% | 264.3 KiB/s | 53.9 KiB | 00m00s [89/91] python3-rpm-generators-0:14-13. 100% | 140.6 KiB/s | 28.5 KiB | 00m00s [90/91] annobin-plugin-gcc-0:12.99-1.fc 100% | 4.7 MiB/s | 996.3 KiB | 00m00s [91/91] annobin-docs-0:12.99-1.fc43.noa 100% | 436.7 KiB/s | 89.5 KiB | 00m00s -------------------------------------------------------------------------------- [91/91] Total 100% | 17.6 MiB/s | 146.3 MiB | 00m08s Running transaction [ 1/93] Verify package files 100% | 191.0 B/s | 91.0 B | 00m00s [ 2/93] Prepare transaction 100% | 784.0 B/s | 91.0 B | 00m00s [ 3/93] Installing fonts-filesystem-1:2 100% | 769.5 KiB/s | 788.0 B | 00m00s [ 4/93] Installing libmpc-0:1.3.1-8.fc4 100% | 158.1 MiB/s | 161.9 KiB | 00m00s [ 5/93] Installing python-rpm-macros-0: 100% | 0.0 B/s | 23.5 KiB | 00m00s [ 6/93] Installing libgfortran-0:15.1.1 100% | 312.2 MiB/s | 2.5 MiB | 00m00s [ 7/93] Installing python3-rpm-macros-0 100% | 0.0 B/s | 6.8 KiB | 00m00s [ 8/93] Installing libpng-2:1.6.50-2.fc 100% | 61.2 MiB/s | 250.8 KiB | 00m00s [ 9/93] Installing tzdata-0:2025b-3.fc4 100% | 55.6 MiB/s | 1.9 MiB | 00m00s [10/93] Installing libwebp-0:1.6.0-2.fc 100% | 236.9 MiB/s | 727.8 KiB | 00m00s [11/93] Installing libjpeg-turbo-0:3.1. 100% | 252.6 MiB/s 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| 278.1 MiB/s | 569.5 KiB | 00m00s [25/93] Installing lzo-0:2.10-15.fc43.s 100% | 97.8 MiB/s | 200.4 KiB | 00m00s [26/93] Installing libX11-common-0:1.8. 100% | 132.0 MiB/s | 1.2 MiB | 00m00s [27/93] Installing m4-0:1.4.20-2.fc43.s 100% | 50.4 MiB/s | 877.6 KiB | 00m00s [28/93] Installing flex-0:2.6.4-20.fc43 100% | 56.1 MiB/s | 919.0 KiB | 00m00s [29/93] Installing openblas-0:0.3.29-2. 100% | 110.8 MiB/s | 113.5 KiB | 00m00s [30/93] Installing openblas-openmp-0:0. 100% | 311.1 MiB/s | 15.2 MiB | 00m00s [31/93] Installing flexiblas-0:3.4.5-4. 100% | 0.0 B/s | 51.6 KiB | 00m00s [32/93] Installing flexiblas-openblas-o 100% | 0.0 B/s | 39.8 KiB | 00m00s [33/93] Installing flexiblas-netlib-0:3 100% | 235.4 MiB/s | 12.5 MiB | 00m00s [34/93] Installing make-1:4.4.1-11.fc43 100% | 97.8 MiB/s | 1.9 MiB | 00m00s [35/93] Installing libubsan-0:15.1.1-5. 100% | 161.6 MiB/s | 496.4 KiB | 00m00s [36/93] Installing libatomic-0:15.1.1-5 100% | 0.0 B/s | 29.2 KiB | 00m00s [37/93] Installing 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python3-six-0:1.17.0 100% | 117.5 MiB/s | 120.3 KiB | 00m00s [76/93] Installing python3-dateutil-1:2 100% | 217.6 MiB/s | 891.1 KiB | 00m00s [77/93] Installing python3-olefile-0:0. 100% | 170.8 MiB/s | 349.8 KiB | 00m00s [78/93] Installing python3-pillow-0:11. 100% | 258.4 MiB/s | 4.4 MiB | 00m00s [79/93] Installing python3-cairo-0:1.28 100% | 255.8 MiB/s | 523.9 KiB | 00m00s [80/93] Installing python3-platformdirs 100% | 179.7 MiB/s | 184.0 KiB | 00m00s [81/93] Installing python3-charset-norm 100% | 25.4 MiB/s | 364.1 KiB | 00m00s [82/93] Installing python3-requests-0:2 100% | 159.6 MiB/s | 490.2 KiB | 00m00s [83/93] Installing python3-pooch-0:1.8. 100% | 127.0 MiB/s | 650.4 KiB | 00m00s [84/93] Installing python3-fonttools-0: 100% | 307.3 MiB/s | 19.1 MiB | 00m00s [85/93] Installing libstdc++-devel-0:15 100% | 408.9 MiB/s | 37.2 MiB | 00m00s [86/93] Installing gcc-c++-0:15.1.1-5.f 100% | 260.2 MiB/s | 30.7 MiB | 00m00s [87/93] Installing python3-matplotlib-0 100% | 324.9 MiB/s | 31.8 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Finish: build setup for ProDy-2.4.1-15.fc43.src.rpm Start: rpmbuild ProDy-2.4.1-15.fc43.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1754611200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.VDUIC2 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.AoNHJl + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + cd /builddir/build/BUILD/ProDy-2.4.1-build + rm -rf ProDy-2.4.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/ProDy-2.4.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd ProDy-2.4.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/Fix-rtbtools-to-permit-numpy-upgrade.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/eigh-evd-when-no-turbo.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + find prody/proteins/ccealign -name '*.h' -exec chmod 0644 '{}' ';' + find prody/proteins/ccealign -name '*.cpp' -exec chmod 0644 '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.FBntVB + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + cd ProDy-2.4.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + RPM_TOXENV=py314 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/pyproject-wheeldir --output /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 78.1.1) Handling wheel from build-system.requires Requirement not satisfied: wheel Handling numpy>=1.10 from build-system.requires Requirement satisfied: numpy>=1.10 (installed: numpy 2.3.2) Handling pyparsing from build-system.requires Requirement satisfied: pyparsing (installed: pyparsing 3.1.2) Handling scipy from build-system.requires Requirement satisfied: scipy (installed: scipy 1.15.3) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 78.1.1) Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/ProDy-2.4.1-15.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 7.6 KiB/s | 3.8 KiB | 00m01s Coprdir repository 100% | 3.0 KiB/s | 1.5 KiB | 00m01s Copr repository 100% | 3.0 KiB/s | 1.5 KiB | 00m01s fedora 100% | 3.7 KiB/s | 5.0 KiB | 00m01s updates 100% | 7.1 KiB/s | 6.0 KiB | 00m01s Repositories loaded. Package "gcc-15.1.1-5.fc43.1.s390x" is already installed. Package "gcc-c++-15.1.1-5.fc43.1.s390x" is already installed. Package "pyproject-rpm-macros-1.18.3-2.fc43.noarch" is already installed. Package "python3-biopython-1.85-3.fc43.s390x" is already installed. Package "python3-devel-3.14.0~rc1-2.fc43.s390x" is already installed. Package "python3-matplotlib-3.10.5-1.fc43.s390x" is already installed. Package "python3-numpy-1:2.3.2-1.fc43.s390x" is already installed. Package "python3-scipy-1.15.3-4.fc43.s390x" is already installed. Package "python3-setuptools-78.1.1-10.fc43.noarch" is already installed. Package "python3-urllib3-2.4.0-5.fc43.noarch" is already installed. Package "python3-numpy-1:2.3.2-1.fc43.s390x" is already installed. Package "python3-packaging-25.0-4.fc43.noarch" is already installed. Package "python3-pyparsing-3.1.2-12.fc43.noarch" is already installed. Package "python3-scipy-1.15.3-4.fc43.s390x" is already installed. Package "python3-setuptools-78.1.1-10.fc43.noarch" is already installed. Package "python3-setuptools-78.1.1-10.fc43.noarch" is already installed. Package Arch Version Repository Size Installing: python3-pip noarch 25.1.1-14.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12.5 MiB python3-wheel noarch 1:0.45.1-16.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 593.2 KiB Transaction Summary: Installing: 2 packages Total size of inbound packages is 3 MiB. Need to download 3 MiB. After this operation, 13 MiB extra will be used (install 13 MiB, remove 0 B). [1/2] python3-wheel-1:0.45.1-16.fc43.no 100% | 203.7 KiB/s | 166.6 KiB | 00m01s [2/2] python3-pip-0:25.1.1-14.fc43.noar 100% | 2.1 MiB/s | 2.6 MiB | 00m01s -------------------------------------------------------------------------------- [2/2] Total 100% | 2.3 MiB/s | 2.8 MiB | 00m01s Running transaction [1/4] Verify package files 100% | 222.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 58.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.45.1 100% | 28.5 MiB/s | 613.2 KiB | 00m00s [4/4] Installing python3-pip-0:25.1.1-1 100% | 119.4 MiB/s | 12.8 MiB | 00m00s Warning: skipped OpenPGP checks for 2 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1754611200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.orkXpX + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + cd ProDy-2.4.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + RPM_TOXENV=py314 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/pyproject-wheeldir --output /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 78.1.1) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling numpy>=1.10 from build-system.requires Requirement satisfied: numpy>=1.10 (installed: numpy 2.3.2) Handling pyparsing from build-system.requires Requirement satisfied: pyparsing (installed: pyparsing 3.1.2) Handling scipy from build-system.requires Requirement satisfied: scipy (installed: scipy 1.15.3) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 78.1.1) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running egg_info creating ProDy.egg-info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt writing manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' running dist_info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/prody-2.4.1.dist-info' Handling numpy>=1.10 from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: numpy>=1.10 (installed: numpy 2.3.2) Handling biopython from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: biopython (installed: biopython 1.85) Handling pyparsing from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: pyparsing (installed: pyparsing 3.1.2) Handling scipy from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: scipy (installed: scipy 1.15.3) Handling setuptools from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: setuptools (installed: setuptools 78.1.1) + cat /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-buildrequires + rm -rfv prody-2.4.1.dist-info/ removed 'prody-2.4.1.dist-info/licenses/LICENSE.rst' removed directory 'prody-2.4.1.dist-info/licenses' removed 'prody-2.4.1.dist-info/METADATA' removed 'prody-2.4.1.dist-info/entry_points.txt' removed 'prody-2.4.1.dist-info/top_level.txt' removed directory 'prody-2.4.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/ProDy-2.4.1-15.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 7.5 KiB/s | 3.8 KiB | 00m01s Coprdir repository 100% | 2.9 KiB/s | 1.5 KiB | 00m01s Copr repository 100% | 3.0 KiB/s | 1.5 KiB | 00m01s fedora 100% | 5.0 KiB/s | 5.0 KiB | 00m01s updates 100% | 6.9 KiB/s | 6.0 KiB | 00m01s Repositories loaded. Package "gcc-15.1.1-5.fc43.1.s390x" is already installed. Package "gcc-c++-15.1.1-5.fc43.1.s390x" is already installed. Package "pyproject-rpm-macros-1.18.3-2.fc43.noarch" is already installed. Package "python3-biopython-1.85-3.fc43.s390x" is already installed. Package "python3-devel-3.14.0~rc1-2.fc43.s390x" is already installed. Package "python3-matplotlib-3.10.5-1.fc43.s390x" is already installed. Package "python3-numpy-1:2.3.2-1.fc43.s390x" is already installed. Package "python3-scipy-1.15.3-4.fc43.s390x" is already installed. Package "python3-setuptools-78.1.1-10.fc43.noarch" is already installed. Package "python3-urllib3-2.4.0-5.fc43.noarch" is already installed. Package "python3-biopython-1.85-3.fc43.s390x" is already installed. Package "python3-numpy-1:2.3.2-1.fc43.s390x" is already installed. Package "python3-packaging-25.0-4.fc43.noarch" is already installed. Package "python3-pip-25.1.1-14.fc43.noarch" is already installed. Package "python3-pyparsing-3.1.2-12.fc43.noarch" is already installed. Package "python3-scipy-1.15.3-4.fc43.s390x" is already installed. Package "python3-setuptools-78.1.1-10.fc43.noarch" is already installed. Package "python3-setuptools-78.1.1-10.fc43.noarch" is already installed. Package "python3-wheel-1:0.45.1-16.fc43.noarch" is already installed. Nothing to do. Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1754611200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Tvrsg1 + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + cd ProDy-2.4.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + RPM_TOXENV=py314 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/pyproject-wheeldir --output /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 78.1.1) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling numpy>=1.10 from build-system.requires Requirement satisfied: numpy>=1.10 (installed: numpy 2.3.2) Handling pyparsing from build-system.requires Requirement satisfied: pyparsing (installed: pyparsing 3.1.2) Handling scipy from build-system.requires Requirement satisfied: scipy (installed: scipy 1.15.3) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 78.1.1) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running egg_info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' running dist_info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/prody-2.4.1.dist-info' Handling numpy>=1.10 from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: numpy>=1.10 (installed: numpy 2.3.2) Handling biopython from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: biopython (installed: biopython 1.85) Handling pyparsing from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: pyparsing (installed: pyparsing 3.1.2) Handling scipy from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: scipy (installed: scipy 1.15.3) Handling setuptools from hook generated metadata: Requires-Dist (ProDy) Requirement satisfied: setuptools (installed: setuptools 78.1.1) + cat /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-buildrequires + rm -rfv prody-2.4.1.dist-info/ removed 'prody-2.4.1.dist-info/licenses/LICENSE.rst' removed directory 'prody-2.4.1.dist-info/licenses' removed 'prody-2.4.1.dist-info/METADATA' removed 'prody-2.4.1.dist-info/top_level.txt' removed 'prody-2.4.1.dist-info/entry_points.txt' removed directory 'prody-2.4.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.K2D7PZ + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.1 + mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/pyproject-wheeldir Processing /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running dist_info creating /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info writing /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file '/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/ProDy.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-modern-metadata-2wclrzl7/prody-2.4.1.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: ProDy Building wheel for ProDy (pyproject.toml): started Running command Building wheel for ProDy (pyproject.toml) /usr/lib/python3.14/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-s390x-cpython-314/prody copying prody/__init__.py -> build/lib.linux-s390x-cpython-314/prody creating build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/subset.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/selection.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/select.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/segment.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/residue.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/pointer.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/nbexclusion.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/improper.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/hierview.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/functions.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/flags.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/fields.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/donor.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/dihedral.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/crossterm.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/chain.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/bond.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/atommap.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/atomic.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/atomgroup.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/atom.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/angle.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/acceptor.py -> build/lib.linux-s390x-cpython-314/prody/atomic copying prody/atomic/__init__.py -> build/lib.linux-s390x-cpython-314/prody/atomic creating build/lib.linux-s390x-cpython-314/prody/database copying prody/database/uniprot.py -> build/lib.linux-s390x-cpython-314/prody/database copying prody/database/quartataweb.py -> build/lib.linux-s390x-cpython-314/prody/database copying prody/database/pfam.py -> build/lib.linux-s390x-cpython-314/prody/database copying prody/database/goa.py -> build/lib.linux-s390x-cpython-314/prody/database copying prody/database/dali.py -> build/lib.linux-s390x-cpython-314/prody/database copying prody/database/cath.py -> build/lib.linux-s390x-cpython-314/prody/database copying prody/database/__init__.py -> build/lib.linux-s390x-cpython-314/prody/database creating build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/vmdfile.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/signature.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/sampling.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/rtb.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/plotting.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/perturb.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/pca.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/nmdfile.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/nma.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/modeset.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/mode.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/mechstiff.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/imanm.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/heatmapper.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/gnm.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/gamma.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/functions.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/exgnm.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/exanm.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/essa.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/entropy.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/editing.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/compare.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/clustenm.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/bildfile.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/bbenm.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/anm.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/analysis.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/adaptive.py -> build/lib.linux-s390x-cpython-314/prody/dynamics copying prody/dynamics/__init__.py -> build/lib.linux-s390x-cpython-314/prody/dynamics creating build/lib.linux-s390x-cpython-314/prody/ensemble copying prody/ensemble/pdbensemble.py -> build/lib.linux-s390x-cpython-314/prody/ensemble copying prody/ensemble/functions.py -> build/lib.linux-s390x-cpython-314/prody/ensemble copying prody/ensemble/ensemble.py -> build/lib.linux-s390x-cpython-314/prody/ensemble copying prody/ensemble/conformation.py -> build/lib.linux-s390x-cpython-314/prody/ensemble copying prody/ensemble/__init__.py -> build/lib.linux-s390x-cpython-314/prody/ensemble creating build/lib.linux-s390x-cpython-314/prody/kdtree copying prody/kdtree/kdtree.py -> build/lib.linux-s390x-cpython-314/prody/kdtree copying prody/kdtree/__init__.py -> build/lib.linux-s390x-cpython-314/prody/kdtree creating build/lib.linux-s390x-cpython-314/prody/measure copying prody/measure/transform.py -> build/lib.linux-s390x-cpython-314/prody/measure copying prody/measure/measure.py -> build/lib.linux-s390x-cpython-314/prody/measure copying prody/measure/contacts.py -> build/lib.linux-s390x-cpython-314/prody/measure copying prody/measure/__init__.py -> build/lib.linux-s390x-cpython-314/prody/measure creating build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/wwpdb.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/waterbridges.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/stride.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/starfile.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/pdbfile.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/pdbclusters.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/localpdb.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/header.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/functions.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/fixer.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/emdfile.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/dssp.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/compare.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/cifheader.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/ciffile.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/blastpdb.py -> build/lib.linux-s390x-cpython-314/prody/proteins copying prody/proteins/__init__.py -> build/lib.linux-s390x-cpython-314/prody/proteins creating build/lib.linux-s390x-cpython-314/prody/sequence copying prody/sequence/sequence.py -> build/lib.linux-s390x-cpython-314/prody/sequence copying prody/sequence/plotting.py -> build/lib.linux-s390x-cpython-314/prody/sequence copying prody/sequence/msafile.py -> build/lib.linux-s390x-cpython-314/prody/sequence copying prody/sequence/msa.py -> build/lib.linux-s390x-cpython-314/prody/sequence copying prody/sequence/analysis.py -> build/lib.linux-s390x-cpython-314/prody/sequence copying prody/sequence/__init__.py -> build/lib.linux-s390x-cpython-314/prody/sequence creating build/lib.linux-s390x-cpython-314/prody/trajectory copying prody/trajectory/trajfile.py -> build/lib.linux-s390x-cpython-314/prody/trajectory copying prody/trajectory/trajectory.py -> build/lib.linux-s390x-cpython-314/prody/trajectory copying prody/trajectory/trajbase.py -> build/lib.linux-s390x-cpython-314/prody/trajectory copying prody/trajectory/psffile.py -> build/lib.linux-s390x-cpython-314/prody/trajectory copying prody/trajectory/frame.py -> build/lib.linux-s390x-cpython-314/prody/trajectory copying prody/trajectory/dcdfile.py -> build/lib.linux-s390x-cpython-314/prody/trajectory copying prody/trajectory/__init__.py -> build/lib.linux-s390x-cpython-314/prody/trajectory creating build/lib.linux-s390x-cpython-314/prody/chromatin copying prody/chromatin/straw.py -> build/lib.linux-s390x-cpython-314/prody/chromatin copying prody/chromatin/norm.py -> build/lib.linux-s390x-cpython-314/prody/chromatin copying prody/chromatin/hic.py -> build/lib.linux-s390x-cpython-314/prody/chromatin copying prody/chromatin/functions.py -> build/lib.linux-s390x-cpython-314/prody/chromatin copying prody/chromatin/cluster.py -> build/lib.linux-s390x-cpython-314/prody/chromatin copying prody/chromatin/__init__.py -> build/lib.linux-s390x-cpython-314/prody/chromatin creating build/lib.linux-s390x-cpython-314/prody/compounds copying prody/compounds/pdbligands.py -> build/lib.linux-s390x-cpython-314/prody/compounds copying prody/compounds/functions.py -> build/lib.linux-s390x-cpython-314/prody/compounds copying prody/compounds/ccd.py -> build/lib.linux-s390x-cpython-314/prody/compounds copying prody/compounds/bird.py -> build/lib.linux-s390x-cpython-314/prody/compounds copying prody/compounds/__init__.py -> build/lib.linux-s390x-cpython-314/prody/compounds creating build/lib.linux-s390x-cpython-314/prody/domain_decomposition copying prody/domain_decomposition/spectrus.py -> build/lib.linux-s390x-cpython-314/prody/domain_decomposition copying prody/domain_decomposition/__init__.py -> build/lib.linux-s390x-cpython-314/prody/domain_decomposition creating build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/eigtools.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/misctools.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/doctools.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/settings.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/seqtools.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/pathtools.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/logger.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/legacy.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/laptools.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/drawtools.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/checkers.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/catchall.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/__init__.py -> build/lib.linux-s390x-cpython-314/prody/utilities copying prody/utilities/TreeConstruction.py -> build/lib.linux-s390x-cpython-314/prody/utilities creating build/lib.linux-s390x-cpython-314/prody/apps copying prody/apps/apptools.py -> build/lib.linux-s390x-cpython-314/prody/apps copying prody/apps/__init__.py -> build/lib.linux-s390x-cpython-314/prody/apps creating build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_energy.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_clustenm.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> build/lib.linux-s390x-cpython-314/prody/apps/prody_apps creating build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> build/lib.linux-s390x-cpython-314/prody/apps/evol_apps creating build/lib.linux-s390x-cpython-314/prody/tests copying prody/tests/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests creating build/lib.linux-s390x-cpython-314/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> build/lib.linux-s390x-cpython-314/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> build/lib.linux-s390x-cpython-314/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> build/lib.linux-s390x-cpython-314/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> build/lib.linux-s390x-cpython-314/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> build/lib.linux-s390x-cpython-314/prody/tests/apps copying prody/tests/apps/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/apps creating build/lib.linux-s390x-cpython-314/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> build/lib.linux-s390x-cpython-314/prody/tests/atomic copying prody/tests/atomic/test_select.py -> build/lib.linux-s390x-cpython-314/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> build/lib.linux-s390x-cpython-314/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> build/lib.linux-s390x-cpython-314/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> build/lib.linux-s390x-cpython-314/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> build/lib.linux-s390x-cpython-314/prody/tests/atomic copying prody/tests/atomic/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/atomic creating build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles creating build/lib.linux-s390x-cpython-314/prody/tests/dynamics copying prody/tests/dynamics/test_lda.py -> build/lib.linux-s390x-cpython-314/prody/tests/dynamics copying prody/tests/dynamics/test_signature.py -> build/lib.linux-s390x-cpython-314/prody/tests/dynamics copying prody/tests/dynamics/test_pca.py -> build/lib.linux-s390x-cpython-314/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> build/lib.linux-s390x-cpython-314/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> build/lib.linux-s390x-cpython-314/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/dynamics creating build/lib.linux-s390x-cpython-314/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> build/lib.linux-s390x-cpython-314/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> build/lib.linux-s390x-cpython-314/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> build/lib.linux-s390x-cpython-314/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> build/lib.linux-s390x-cpython-314/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/ensemble creating build/lib.linux-s390x-cpython-314/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> build/lib.linux-s390x-cpython-314/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/kdtree creating build/lib.linux-s390x-cpython-314/prody/tests/measure copying prody/tests/measure/test_transform.py -> build/lib.linux-s390x-cpython-314/prody/tests/measure copying prody/tests/measure/test_measure.py -> build/lib.linux-s390x-cpython-314/prody/tests/measure copying prody/tests/measure/test_contacts.py -> build/lib.linux-s390x-cpython-314/prody/tests/measure copying prody/tests/measure/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/measure creating build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/test_waterbridges.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/test_fixer.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/test_header.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/test_ciffile.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins copying prody/tests/proteins/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/proteins creating build/lib.linux-s390x-cpython-314/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> build/lib.linux-s390x-cpython-314/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> build/lib.linux-s390x-cpython-314/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> build/lib.linux-s390x-cpython-314/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> build/lib.linux-s390x-cpython-314/prody/tests/sequence copying prody/tests/sequence/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/sequence creating build/lib.linux-s390x-cpython-314/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> build/lib.linux-s390x-cpython-314/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> build/lib.linux-s390x-cpython-314/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/trajectory creating build/lib.linux-s390x-cpython-314/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> build/lib.linux-s390x-cpython-314/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> build/lib.linux-s390x-cpython-314/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> build/lib.linux-s390x-cpython-314/prody/tests/utilities copying prody/tests/utilities/__init__.py -> build/lib.linux-s390x-cpython-314/prody/tests/utilities creating build/lib.linux-s390x-cpython-314/prody/utilities/datafiles copying prody/utilities/datafiles/saxs_water.dat -> build/lib.linux-s390x-cpython-314/prody/utilities/datafiles copying prody/utilities/datafiles/mod_res_map.dat -> build/lib.linux-s390x-cpython-314/prody/utilities/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb4v8r_hex.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb4v8r_h36.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb3p3w.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb3o21.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb3hsy.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb2nwl-opm.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_ca.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg.pdb -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_vectors.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_evalues.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/hit1ubi.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_vectors.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_evalues.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/commute1ubi.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_cov.coo -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_hessian.coo -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6zu5.cif -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6yfy.cif -> build/lib.linux-s390x-cpython-314/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build/temp.linux-s390x-cpython-314/prody/dynamics gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/usr/include/python3.14 -c prody/dynamics/rtbtools.c -o build/temp.linux-s390x-cpython-314/prody/dynamics/rtbtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-s390x-cpython-314/prody/dynamics/rtbtools.o -L/usr/lib64 -o build/lib.linux-s390x-cpython-314/prody/dynamics/rtbtools.cpython-314-s390x-linux-gnu.so building 'prody.dynamics.smtools' extension gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/usr/include/python3.14 -c prody/dynamics/smtools.c -o build/temp.linux-s390x-cpython-314/prody/dynamics/smtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-s390x-cpython-314/prody/dynamics/smtools.o -L/usr/lib64 -o build/lib.linux-s390x-cpython-314/prody/dynamics/smtools.cpython-314-s390x-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-s390x-cpython-314/prody/sequence gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/usr/include/python3.14 -c prody/sequence/msatools.c -o build/temp.linux-s390x-cpython-314/prody/sequence/msatools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-s390x-cpython-314/prody/sequence/msatools.o -L/usr/lib64 -o build/lib.linux-s390x-cpython-314/prody/sequence/msatools.cpython-314-s390x-linux-gnu.so building 'prody.sequence.msaio' extension gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/usr/include/python3.14 -c prody/sequence/msaio.c -o build/temp.linux-s390x-cpython-314/prody/sequence/msaio.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-s390x-cpython-314/prody/sequence/msaio.o -L/usr/lib64 -o build/lib.linux-s390x-cpython-314/prody/sequence/msaio.cpython-314-s390x-linux-gnu.so building 'prody.sequence.seqtools' extension gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/usr/include/python3.14 -c prody/sequence/seqtools.c -o build/temp.linux-s390x-cpython-314/prody/sequence/seqtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-s390x-cpython-314/prody/sequence/seqtools.o -L/usr/lib64 -o build/lib.linux-s390x-cpython-314/prody/sequence/seqtools.cpython-314-s390x-linux-gnu.so building 'prody.kdtree._CKDTree' extension creating build/temp.linux-s390x-cpython-314/prody/kdtree gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/usr/include/python3.14 -c prody/kdtree/KDTree.c -o build/temp.linux-s390x-cpython-314/prody/kdtree/KDTree.o gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/usr/include/python3.14 -c prody/kdtree/KDTreemodule.c -o build/temp.linux-s390x-cpython-314/prody/kdtree/KDTreemodule.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-s390x-cpython-314/prody/kdtree/KDTree.o build/temp.linux-s390x-cpython-314/prody/kdtree/KDTreemodule.o -L/usr/lib64 -o build/lib.linux-s390x-cpython-314/prody/kdtree/_CKDTree.cpython-314-s390x-linux-gnu.so building 'prody.proteins.ccealign' extension creating build/temp.linux-s390x-cpython-314/prody/proteins/ccealign g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -Iprody/utilities/tnt -I/usr/include/python3.14 -c prody/proteins/ccealign/ccealignmodule.cpp -o build/temp.linux-s390x-cpython-314/prody/proteins/ccealign/ccealignmodule.o In file included from prody/utilities/tnt/tnt.h:41, from prody/proteins/ccealign/ccealignmodule.h:43, from prody/proteins/ccealign/ccealignmodule.cpp:38: In member function ‘TNT::Array1D::set_(double*, double*, double const&)’, inlined from ‘TNT::Array1D::Array1D(int, double const&)’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest(cePoint*, cePoint*, afp**, int, int, int)’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ~~~^~~ g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-s390x-cpython-314/prody/proteins/ccealign/ccealignmodule.o -L/usr/lib64 -o build/lib.linux-s390x-cpython-314/prody/proteins/ccealign.cpython-314-s390x-linux-gnu.so In member function ‘set_’, inlined from ‘__ct ’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘__builtin_memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ^ installing to build/bdist.linux-s390x/wheel running install running install_lib creating build/bdist.linux-s390x/wheel creating build/bdist.linux-s390x/wheel/prody creating build/bdist.linux-s390x/wheel/prody/tests creating build/bdist.linux-s390x/wheel/prody/tests/utilities copying build/lib.linux-s390x-cpython-314/prody/tests/utilities/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/utilities copying build/lib.linux-s390x-cpython-314/prody/tests/utilities/test_checkers.py -> build/bdist.linux-s390x/wheel/./prody/tests/utilities copying build/lib.linux-s390x-cpython-314/prody/tests/utilities/test_misctools.py -> build/bdist.linux-s390x/wheel/./prody/tests/utilities copying build/lib.linux-s390x-cpython-314/prody/tests/utilities/test_pathtools.py -> build/bdist.linux-s390x/wheel/./prody/tests/utilities creating build/bdist.linux-s390x/wheel/prody/tests/trajectory copying build/lib.linux-s390x-cpython-314/prody/tests/trajectory/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/trajectory copying build/lib.linux-s390x-cpython-314/prody/tests/trajectory/test_dcdfile.py -> build/bdist.linux-s390x/wheel/./prody/tests/trajectory copying build/lib.linux-s390x-cpython-314/prody/tests/trajectory/test_frame.py -> build/bdist.linux-s390x/wheel/./prody/tests/trajectory creating build/bdist.linux-s390x/wheel/prody/tests/sequence copying build/lib.linux-s390x-cpython-314/prody/tests/sequence/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/sequence copying build/lib.linux-s390x-cpython-314/prody/tests/sequence/test_analysis.py -> build/bdist.linux-s390x/wheel/./prody/tests/sequence copying build/lib.linux-s390x-cpython-314/prody/tests/sequence/test_msa.py -> build/bdist.linux-s390x/wheel/./prody/tests/sequence copying build/lib.linux-s390x-cpython-314/prody/tests/sequence/test_msafile.py -> build/bdist.linux-s390x/wheel/./prody/tests/sequence copying build/lib.linux-s390x-cpython-314/prody/tests/sequence/test_sequence.py -> build/bdist.linux-s390x/wheel/./prody/tests/sequence creating build/bdist.linux-s390x/wheel/prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/test_ciffile.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/test_dssp.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/test_header.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/test_localpdb.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/test_pdbfile.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/test_wwpdb.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/test_fixer.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins copying build/lib.linux-s390x-cpython-314/prody/tests/proteins/test_waterbridges.py -> build/bdist.linux-s390x/wheel/./prody/tests/proteins creating build/bdist.linux-s390x/wheel/prody/tests/measure copying build/lib.linux-s390x-cpython-314/prody/tests/measure/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/measure copying build/lib.linux-s390x-cpython-314/prody/tests/measure/test_contacts.py -> build/bdist.linux-s390x/wheel/./prody/tests/measure copying build/lib.linux-s390x-cpython-314/prody/tests/measure/test_measure.py -> build/bdist.linux-s390x/wheel/./prody/tests/measure copying build/lib.linux-s390x-cpython-314/prody/tests/measure/test_transform.py -> build/bdist.linux-s390x/wheel/./prody/tests/measure creating build/bdist.linux-s390x/wheel/prody/tests/kdtree copying build/lib.linux-s390x-cpython-314/prody/tests/kdtree/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/kdtree copying build/lib.linux-s390x-cpython-314/prody/tests/kdtree/test_kdtree.py -> build/bdist.linux-s390x/wheel/./prody/tests/kdtree creating build/bdist.linux-s390x/wheel/prody/tests/ensemble copying build/lib.linux-s390x-cpython-314/prody/tests/ensemble/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/ensemble copying build/lib.linux-s390x-cpython-314/prody/tests/ensemble/test_conformation.py -> build/bdist.linux-s390x/wheel/./prody/tests/ensemble copying build/lib.linux-s390x-cpython-314/prody/tests/ensemble/test_ensemble.py -> build/bdist.linux-s390x/wheel/./prody/tests/ensemble copying build/lib.linux-s390x-cpython-314/prody/tests/ensemble/test_functions.py -> build/bdist.linux-s390x/wheel/./prody/tests/ensemble copying build/lib.linux-s390x-cpython-314/prody/tests/ensemble/test_pdbensemble.py -> build/bdist.linux-s390x/wheel/./prody/tests/ensemble creating build/bdist.linux-s390x/wheel/prody/tests/dynamics copying build/lib.linux-s390x-cpython-314/prody/tests/dynamics/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/dynamics copying build/lib.linux-s390x-cpython-314/prody/tests/dynamics/test_editing.py -> build/bdist.linux-s390x/wheel/./prody/tests/dynamics copying build/lib.linux-s390x-cpython-314/prody/tests/dynamics/test_enms.py -> build/bdist.linux-s390x/wheel/./prody/tests/dynamics copying build/lib.linux-s390x-cpython-314/prody/tests/dynamics/test_pca.py -> build/bdist.linux-s390x/wheel/./prody/tests/dynamics copying build/lib.linux-s390x-cpython-314/prody/tests/dynamics/test_signature.py -> build/bdist.linux-s390x/wheel/./prody/tests/dynamics copying build/lib.linux-s390x-cpython-314/prody/tests/dynamics/test_lda.py -> build/bdist.linux-s390x/wheel/./prody/tests/dynamics creating build/bdist.linux-s390x/wheel/prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/mmcif_6yfy.cif -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/mmcif_6zu5.cif -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/msa_Cys_knot.fasta -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/msa_Cys_knot.slx -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/msa_Cys_knot.sth -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/xmlSTI.xml -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/dcd2k39_truncated.dcd -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/anm1ubi_hessian.coo -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/exanm2nwl_hessian.coo -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pca2k39_cov.coo -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/rtb2gb1_hessian.coo -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/rtb2gb1_project.coo -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/anm1ubi_evalues.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/anm1ubi_vectors.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/commute1ubi.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/exanm2nwl_evalues.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/exanm2nwl_vectors.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/gnm1ubi_evalues.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/gnm1ubi_vectors.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/hit1ubi.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/msa_Cys_knot_di.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/msa_Cys_knot_sca.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pca2k39_evalues.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pca2k39_vectors.dat -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb1ejg.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb1r19_dssp.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb1ubi.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb1ubi_ca.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb2gb1_truncated.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb2k39_ca.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb2k39_truncated.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb2nwl-opm.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb3hsy.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb3mht.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb3o21.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb3p3w.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb4v8r_h36.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb4v8r_hex.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/pdbRTER.pdb -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles copying build/lib.linux-s390x-cpython-314/prody/tests/datafiles/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/datafiles creating build/bdist.linux-s390x/wheel/prody/tests/atomic copying build/lib.linux-s390x-cpython-314/prody/tests/atomic/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/atomic copying build/lib.linux-s390x-cpython-314/prody/tests/atomic/test_atomic.py -> build/bdist.linux-s390x/wheel/./prody/tests/atomic copying build/lib.linux-s390x-cpython-314/prody/tests/atomic/test_atommap.py -> build/bdist.linux-s390x/wheel/./prody/tests/atomic copying build/lib.linux-s390x-cpython-314/prody/tests/atomic/test_fragment.py -> build/bdist.linux-s390x/wheel/./prody/tests/atomic copying build/lib.linux-s390x-cpython-314/prody/tests/atomic/test_hierview.py -> build/bdist.linux-s390x/wheel/./prody/tests/atomic copying build/lib.linux-s390x-cpython-314/prody/tests/atomic/test_select.py -> build/bdist.linux-s390x/wheel/./prody/tests/atomic copying build/lib.linux-s390x-cpython-314/prody/tests/atomic/test_subset.py -> build/bdist.linux-s390x/wheel/./prody/tests/atomic creating build/bdist.linux-s390x/wheel/prody/tests/apps copying build/lib.linux-s390x-cpython-314/prody/tests/apps/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests/apps copying build/lib.linux-s390x-cpython-314/prody/tests/apps/test_prody_anm.py -> build/bdist.linux-s390x/wheel/./prody/tests/apps copying build/lib.linux-s390x-cpython-314/prody/tests/apps/test_prody_catdcd.py -> build/bdist.linux-s390x/wheel/./prody/tests/apps copying build/lib.linux-s390x-cpython-314/prody/tests/apps/test_prody_examples.py -> build/bdist.linux-s390x/wheel/./prody/tests/apps copying build/lib.linux-s390x-cpython-314/prody/tests/apps/test_prody_gnm.py -> build/bdist.linux-s390x/wheel/./prody/tests/apps copying build/lib.linux-s390x-cpython-314/prody/tests/apps/test_prody_pca.py -> build/bdist.linux-s390x/wheel/./prody/tests/apps copying build/lib.linux-s390x-cpython-314/prody/tests/__init__.py -> build/bdist.linux-s390x/wheel/./prody/tests creating build/bdist.linux-s390x/wheel/prody/apps creating build/bdist.linux-s390x/wheel/prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_coevol.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_conserv.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_fetch.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_filter.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_merge.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_occupancy.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_rankorder.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_refine.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/evol_search.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps copying build/lib.linux-s390x-cpython-314/prody/apps/evol_apps/__init__.py -> build/bdist.linux-s390x/wheel/./prody/apps/evol_apps creating build/bdist.linux-s390x/wheel/prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/nmaoptions.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_align.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_anm.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_biomol.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_blast.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_catdcd.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_clustenm.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_contacts.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_eda.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_energy.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_fetch.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_gnm.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_pca.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/prody_select.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/prody_apps/__init__.py -> build/bdist.linux-s390x/wheel/./prody/apps/prody_apps copying build/lib.linux-s390x-cpython-314/prody/apps/__init__.py -> build/bdist.linux-s390x/wheel/./prody/apps copying build/lib.linux-s390x-cpython-314/prody/apps/apptools.py -> build/bdist.linux-s390x/wheel/./prody/apps creating build/bdist.linux-s390x/wheel/prody/utilities creating build/bdist.linux-s390x/wheel/prody/utilities/datafiles copying build/lib.linux-s390x-cpython-314/prody/utilities/datafiles/mod_res_map.dat -> build/bdist.linux-s390x/wheel/./prody/utilities/datafiles copying build/lib.linux-s390x-cpython-314/prody/utilities/datafiles/saxs_water.dat -> build/bdist.linux-s390x/wheel/./prody/utilities/datafiles copying build/lib.linux-s390x-cpython-314/prody/utilities/TreeConstruction.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/__init__.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/catchall.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/checkers.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/drawtools.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/laptools.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/legacy.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/logger.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/pathtools.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/seqtools.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/settings.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/doctools.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/misctools.py -> build/bdist.linux-s390x/wheel/./prody/utilities copying build/lib.linux-s390x-cpython-314/prody/utilities/eigtools.py -> build/bdist.linux-s390x/wheel/./prody/utilities creating build/bdist.linux-s390x/wheel/prody/domain_decomposition copying build/lib.linux-s390x-cpython-314/prody/domain_decomposition/__init__.py -> build/bdist.linux-s390x/wheel/./prody/domain_decomposition copying build/lib.linux-s390x-cpython-314/prody/domain_decomposition/spectrus.py -> build/bdist.linux-s390x/wheel/./prody/domain_decomposition creating build/bdist.linux-s390x/wheel/prody/compounds copying build/lib.linux-s390x-cpython-314/prody/compounds/__init__.py -> build/bdist.linux-s390x/wheel/./prody/compounds copying build/lib.linux-s390x-cpython-314/prody/compounds/bird.py -> build/bdist.linux-s390x/wheel/./prody/compounds copying build/lib.linux-s390x-cpython-314/prody/compounds/ccd.py -> build/bdist.linux-s390x/wheel/./prody/compounds copying build/lib.linux-s390x-cpython-314/prody/compounds/functions.py -> build/bdist.linux-s390x/wheel/./prody/compounds copying build/lib.linux-s390x-cpython-314/prody/compounds/pdbligands.py -> build/bdist.linux-s390x/wheel/./prody/compounds creating build/bdist.linux-s390x/wheel/prody/chromatin copying build/lib.linux-s390x-cpython-314/prody/chromatin/__init__.py -> build/bdist.linux-s390x/wheel/./prody/chromatin copying build/lib.linux-s390x-cpython-314/prody/chromatin/cluster.py -> build/bdist.linux-s390x/wheel/./prody/chromatin copying build/lib.linux-s390x-cpython-314/prody/chromatin/functions.py -> build/bdist.linux-s390x/wheel/./prody/chromatin copying build/lib.linux-s390x-cpython-314/prody/chromatin/hic.py -> build/bdist.linux-s390x/wheel/./prody/chromatin copying build/lib.linux-s390x-cpython-314/prody/chromatin/norm.py -> build/bdist.linux-s390x/wheel/./prody/chromatin copying build/lib.linux-s390x-cpython-314/prody/chromatin/straw.py -> build/bdist.linux-s390x/wheel/./prody/chromatin creating build/bdist.linux-s390x/wheel/prody/trajectory copying build/lib.linux-s390x-cpython-314/prody/trajectory/__init__.py -> build/bdist.linux-s390x/wheel/./prody/trajectory copying build/lib.linux-s390x-cpython-314/prody/trajectory/dcdfile.py -> build/bdist.linux-s390x/wheel/./prody/trajectory copying build/lib.linux-s390x-cpython-314/prody/trajectory/frame.py -> build/bdist.linux-s390x/wheel/./prody/trajectory copying build/lib.linux-s390x-cpython-314/prody/trajectory/psffile.py -> build/bdist.linux-s390x/wheel/./prody/trajectory copying build/lib.linux-s390x-cpython-314/prody/trajectory/trajbase.py -> build/bdist.linux-s390x/wheel/./prody/trajectory copying build/lib.linux-s390x-cpython-314/prody/trajectory/trajectory.py -> build/bdist.linux-s390x/wheel/./prody/trajectory copying build/lib.linux-s390x-cpython-314/prody/trajectory/trajfile.py -> build/bdist.linux-s390x/wheel/./prody/trajectory creating build/bdist.linux-s390x/wheel/prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/seqtools.cpython-314-s390x-linux-gnu.so -> build/bdist.linux-s390x/wheel/./prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/msaio.cpython-314-s390x-linux-gnu.so -> build/bdist.linux-s390x/wheel/./prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/msatools.cpython-314-s390x-linux-gnu.so -> build/bdist.linux-s390x/wheel/./prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/__init__.py -> build/bdist.linux-s390x/wheel/./prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/analysis.py -> build/bdist.linux-s390x/wheel/./prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/msa.py -> build/bdist.linux-s390x/wheel/./prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/msafile.py -> build/bdist.linux-s390x/wheel/./prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/plotting.py -> build/bdist.linux-s390x/wheel/./prody/sequence copying build/lib.linux-s390x-cpython-314/prody/sequence/sequence.py -> build/bdist.linux-s390x/wheel/./prody/sequence creating build/bdist.linux-s390x/wheel/prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/ccealign.cpython-314-s390x-linux-gnu.so -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/__init__.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/blastpdb.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/ciffile.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/cifheader.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/compare.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/dssp.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/emdfile.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/fixer.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/functions.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/header.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/localpdb.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/pdbclusters.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/pdbfile.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/starfile.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/stride.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/waterbridges.py -> build/bdist.linux-s390x/wheel/./prody/proteins copying build/lib.linux-s390x-cpython-314/prody/proteins/wwpdb.py -> build/bdist.linux-s390x/wheel/./prody/proteins creating build/bdist.linux-s390x/wheel/prody/measure copying build/lib.linux-s390x-cpython-314/prody/measure/__init__.py -> build/bdist.linux-s390x/wheel/./prody/measure copying build/lib.linux-s390x-cpython-314/prody/measure/contacts.py -> build/bdist.linux-s390x/wheel/./prody/measure copying build/lib.linux-s390x-cpython-314/prody/measure/measure.py -> build/bdist.linux-s390x/wheel/./prody/measure copying build/lib.linux-s390x-cpython-314/prody/measure/transform.py -> build/bdist.linux-s390x/wheel/./prody/measure creating build/bdist.linux-s390x/wheel/prody/kdtree copying build/lib.linux-s390x-cpython-314/prody/kdtree/_CKDTree.cpython-314-s390x-linux-gnu.so -> build/bdist.linux-s390x/wheel/./prody/kdtree copying build/lib.linux-s390x-cpython-314/prody/kdtree/__init__.py -> build/bdist.linux-s390x/wheel/./prody/kdtree copying build/lib.linux-s390x-cpython-314/prody/kdtree/kdtree.py -> build/bdist.linux-s390x/wheel/./prody/kdtree creating build/bdist.linux-s390x/wheel/prody/ensemble copying build/lib.linux-s390x-cpython-314/prody/ensemble/__init__.py -> build/bdist.linux-s390x/wheel/./prody/ensemble copying build/lib.linux-s390x-cpython-314/prody/ensemble/conformation.py -> build/bdist.linux-s390x/wheel/./prody/ensemble copying build/lib.linux-s390x-cpython-314/prody/ensemble/ensemble.py -> build/bdist.linux-s390x/wheel/./prody/ensemble copying build/lib.linux-s390x-cpython-314/prody/ensemble/functions.py -> build/bdist.linux-s390x/wheel/./prody/ensemble copying build/lib.linux-s390x-cpython-314/prody/ensemble/pdbensemble.py -> build/bdist.linux-s390x/wheel/./prody/ensemble creating build/bdist.linux-s390x/wheel/prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/smtools.cpython-314-s390x-linux-gnu.so -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/rtbtools.cpython-314-s390x-linux-gnu.so -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/__init__.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/adaptive.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/analysis.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/anm.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/bbenm.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/bildfile.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/clustenm.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/compare.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/editing.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/entropy.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/essa.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/exanm.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/exgnm.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/functions.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/gamma.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/gnm.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/heatmapper.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/imanm.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/mechstiff.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/mode.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/modeset.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/nma.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/nmdfile.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/pca.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/perturb.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/plotting.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/rtb.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/sampling.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/signature.py -> build/bdist.linux-s390x/wheel/./prody/dynamics copying build/lib.linux-s390x-cpython-314/prody/dynamics/vmdfile.py -> build/bdist.linux-s390x/wheel/./prody/dynamics creating build/bdist.linux-s390x/wheel/prody/database copying build/lib.linux-s390x-cpython-314/prody/database/__init__.py -> build/bdist.linux-s390x/wheel/./prody/database copying build/lib.linux-s390x-cpython-314/prody/database/cath.py -> build/bdist.linux-s390x/wheel/./prody/database copying build/lib.linux-s390x-cpython-314/prody/database/dali.py -> build/bdist.linux-s390x/wheel/./prody/database copying build/lib.linux-s390x-cpython-314/prody/database/goa.py -> build/bdist.linux-s390x/wheel/./prody/database copying build/lib.linux-s390x-cpython-314/prody/database/pfam.py -> build/bdist.linux-s390x/wheel/./prody/database copying build/lib.linux-s390x-cpython-314/prody/database/quartataweb.py -> build/bdist.linux-s390x/wheel/./prody/database copying build/lib.linux-s390x-cpython-314/prody/database/uniprot.py -> build/bdist.linux-s390x/wheel/./prody/database creating build/bdist.linux-s390x/wheel/prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/__init__.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/acceptor.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/angle.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/atom.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/atomgroup.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/atomic.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/atommap.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/bond.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/chain.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/crossterm.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/dihedral.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/donor.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/fields.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/flags.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/functions.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/hierview.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/improper.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/nbexclusion.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/pointer.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/residue.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/segment.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/select.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/selection.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/atomic/subset.py -> build/bdist.linux-s390x/wheel/./prody/atomic copying build/lib.linux-s390x-cpython-314/prody/__init__.py -> build/bdist.linux-s390x/wheel/./prody running install_egg_info running egg_info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' Copying ProDy.egg-info to build/bdist.linux-s390x/wheel/./ProDy-2.4.1-py3.14.egg-info running install_scripts creating build/bdist.linux-s390x/wheel/prody-2.4.1.dist-info/WHEEL creating '/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir/pip-wheel-kckukp21/.tmp-g8rrjq0b/prody-2.4.1-cp314-cp314-linux_s390x.whl' and adding 'build/bdist.linux-s390x/wheel' to it adding 'prody/__init__.py' adding 'prody/apps/__init__.py' adding 'prody/apps/apptools.py' adding 'prody/apps/evol_apps/__init__.py' adding 'prody/apps/evol_apps/evol_coevol.py' adding 'prody/apps/evol_apps/evol_conserv.py' adding 'prody/apps/evol_apps/evol_fetch.py' adding 'prody/apps/evol_apps/evol_filter.py' adding 'prody/apps/evol_apps/evol_merge.py' adding 'prody/apps/evol_apps/evol_occupancy.py' adding 'prody/apps/evol_apps/evol_rankorder.py' adding 'prody/apps/evol_apps/evol_refine.py' adding 'prody/apps/evol_apps/evol_search.py' adding 'prody/apps/prody_apps/__init__.py' adding 'prody/apps/prody_apps/nmaoptions.py' adding 'prody/apps/prody_apps/prody_align.py' adding 'prody/apps/prody_apps/prody_anm.py' adding 'prody/apps/prody_apps/prody_biomol.py' adding 'prody/apps/prody_apps/prody_blast.py' adding 'prody/apps/prody_apps/prody_catdcd.py' adding 'prody/apps/prody_apps/prody_clustenm.py' adding 'prody/apps/prody_apps/prody_contacts.py' adding 'prody/apps/prody_apps/prody_eda.py' adding 'prody/apps/prody_apps/prody_energy.py' adding 'prody/apps/prody_apps/prody_fetch.py' adding 'prody/apps/prody_apps/prody_gnm.py' adding 'prody/apps/prody_apps/prody_pca.py' adding 'prody/apps/prody_apps/prody_select.py' adding 'prody/atomic/__init__.py' adding 'prody/atomic/acceptor.py' adding 'prody/atomic/angle.py' adding 'prody/atomic/atom.py' adding 'prody/atomic/atomgroup.py' adding 'prody/atomic/atomic.py' adding 'prody/atomic/atommap.py' adding 'prody/atomic/bond.py' adding 'prody/atomic/chain.py' adding 'prody/atomic/crossterm.py' adding 'prody/atomic/dihedral.py' adding 'prody/atomic/donor.py' adding 'prody/atomic/fields.py' adding 'prody/atomic/flags.py' adding 'prody/atomic/functions.py' adding 'prody/atomic/hierview.py' adding 'prody/atomic/improper.py' adding 'prody/atomic/nbexclusion.py' adding 'prody/atomic/pointer.py' adding 'prody/atomic/residue.py' adding 'prody/atomic/segment.py' adding 'prody/atomic/select.py' adding 'prody/atomic/selection.py' adding 'prody/atomic/subset.py' adding 'prody/chromatin/__init__.py' adding 'prody/chromatin/cluster.py' adding 'prody/chromatin/functions.py' adding 'prody/chromatin/hic.py' adding 'prody/chromatin/norm.py' adding 'prody/chromatin/straw.py' adding 'prody/compounds/__init__.py' adding 'prody/compounds/bird.py' adding 'prody/compounds/ccd.py' adding 'prody/compounds/functions.py' adding 'prody/compounds/pdbligands.py' adding 'prody/database/__init__.py' adding 'prody/database/cath.py' adding 'prody/database/dali.py' adding 'prody/database/goa.py' adding 'prody/database/pfam.py' adding 'prody/database/quartataweb.py' adding 'prody/database/uniprot.py' adding 'prody/domain_decomposition/__init__.py' adding 'prody/domain_decomposition/spectrus.py' adding 'prody/dynamics/__init__.py' adding 'prody/dynamics/adaptive.py' adding 'prody/dynamics/analysis.py' adding 'prody/dynamics/anm.py' adding 'prody/dynamics/bbenm.py' adding 'prody/dynamics/bildfile.py' adding 'prody/dynamics/clustenm.py' adding 'prody/dynamics/compare.py' adding 'prody/dynamics/editing.py' adding 'prody/dynamics/entropy.py' adding 'prody/dynamics/essa.py' adding 'prody/dynamics/exanm.py' adding 'prody/dynamics/exgnm.py' adding 'prody/dynamics/functions.py' adding 'prody/dynamics/gamma.py' adding 'prody/dynamics/gnm.py' adding 'prody/dynamics/heatmapper.py' adding 'prody/dynamics/imanm.py' adding 'prody/dynamics/mechstiff.py' adding 'prody/dynamics/mode.py' adding 'prody/dynamics/modeset.py' adding 'prody/dynamics/nma.py' adding 'prody/dynamics/nmdfile.py' adding 'prody/dynamics/pca.py' adding 'prody/dynamics/perturb.py' adding 'prody/dynamics/plotting.py' adding 'prody/dynamics/rtb.py' adding 'prody/dynamics/rtbtools.cpython-314-s390x-linux-gnu.so' adding 'prody/dynamics/sampling.py' adding 'prody/dynamics/signature.py' adding 'prody/dynamics/smtools.cpython-314-s390x-linux-gnu.so' adding 'prody/dynamics/vmdfile.py' adding 'prody/ensemble/__init__.py' adding 'prody/ensemble/conformation.py' adding 'prody/ensemble/ensemble.py' adding 'prody/ensemble/functions.py' adding 'prody/ensemble/pdbensemble.py' adding 'prody/kdtree/_CKDTree.cpython-314-s390x-linux-gnu.so' adding 'prody/kdtree/__init__.py' adding 'prody/kdtree/kdtree.py' adding 'prody/measure/__init__.py' adding 'prody/measure/contacts.py' adding 'prody/measure/measure.py' adding 'prody/measure/transform.py' adding 'prody/proteins/__init__.py' adding 'prody/proteins/blastpdb.py' adding 'prody/proteins/ccealign.cpython-314-s390x-linux-gnu.so' adding 'prody/proteins/ciffile.py' adding 'prody/proteins/cifheader.py' adding 'prody/proteins/compare.py' adding 'prody/proteins/dssp.py' adding 'prody/proteins/emdfile.py' adding 'prody/proteins/fixer.py' adding 'prody/proteins/functions.py' adding 'prody/proteins/header.py' adding 'prody/proteins/localpdb.py' adding 'prody/proteins/pdbclusters.py' adding 'prody/proteins/pdbfile.py' adding 'prody/proteins/starfile.py' adding 'prody/proteins/stride.py' adding 'prody/proteins/waterbridges.py' adding 'prody/proteins/wwpdb.py' adding 'prody/sequence/__init__.py' adding 'prody/sequence/analysis.py' adding 'prody/sequence/msa.py' adding 'prody/sequence/msafile.py' adding 'prody/sequence/msaio.cpython-314-s390x-linux-gnu.so' adding 'prody/sequence/msatools.cpython-314-s390x-linux-gnu.so' adding 'prody/sequence/plotting.py' adding 'prody/sequence/seqtools.cpython-314-s390x-linux-gnu.so' adding 'prody/sequence/sequence.py' adding 'prody/tests/__init__.py' adding 'prody/tests/apps/__init__.py' adding 'prody/tests/apps/test_prody_anm.py' adding 'prody/tests/apps/test_prody_catdcd.py' adding 'prody/tests/apps/test_prody_examples.py' adding 'prody/tests/apps/test_prody_gnm.py' adding 'prody/tests/apps/test_prody_pca.py' adding 'prody/tests/atomic/__init__.py' adding 'prody/tests/atomic/test_atomic.py' adding 'prody/tests/atomic/test_atommap.py' adding 'prody/tests/atomic/test_fragment.py' adding 'prody/tests/atomic/test_hierview.py' adding 'prody/tests/atomic/test_select.py' adding 'prody/tests/atomic/test_subset.py' adding 'prody/tests/datafiles/__init__.py' adding 'prody/tests/datafiles/anm1ubi_evalues.dat' adding 'prody/tests/datafiles/anm1ubi_hessian.coo' adding 'prody/tests/datafiles/anm1ubi_vectors.dat' adding 'prody/tests/datafiles/commute1ubi.dat' adding 'prody/tests/datafiles/dcd2k39_truncated.dcd' adding 'prody/tests/datafiles/exanm2nwl_evalues.dat' adding 'prody/tests/datafiles/exanm2nwl_hessian.coo' adding 'prody/tests/datafiles/exanm2nwl_vectors.dat' adding 'prody/tests/datafiles/gnm1ubi_evalues.dat' adding 'prody/tests/datafiles/gnm1ubi_kirchhoff.coo' adding 'prody/tests/datafiles/gnm1ubi_vectors.dat' adding 'prody/tests/datafiles/hit1ubi.dat' adding 'prody/tests/datafiles/mmcif_6yfy.cif' adding 'prody/tests/datafiles/mmcif_6zu5.cif' adding 'prody/tests/datafiles/msa_3hsyA_3o21A.fasta' adding 'prody/tests/datafiles/msa_Cys_knot.fasta' adding 'prody/tests/datafiles/msa_Cys_knot.slx' adding 'prody/tests/datafiles/msa_Cys_knot.sth' adding 'prody/tests/datafiles/msa_Cys_knot_di.dat' adding 'prody/tests/datafiles/msa_Cys_knot_sca.dat' adding 'prody/tests/datafiles/pca2k39_cov.coo' adding 'prody/tests/datafiles/pca2k39_evalues.dat' adding 'prody/tests/datafiles/pca2k39_vectors.dat' adding 'prody/tests/datafiles/pdb1ejg.pdb' adding 'prody/tests/datafiles/pdb1ejg_oneatom.pdb' adding 'prody/tests/datafiles/pdb1r19_dssp.pdb' adding 'prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb' adding 'prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb' adding 'prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb' adding 'prody/tests/datafiles/pdb1ubi.pdb' adding 'prody/tests/datafiles/pdb1ubi_ca.pdb' adding 'prody/tests/datafiles/pdb2gb1_truncated.pdb' adding 'prody/tests/datafiles/pdb2k39_ca.pdb' adding 'prody/tests/datafiles/pdb2k39_truncated.pdb' adding 'prody/tests/datafiles/pdb2nwl-opm.pdb' adding 'prody/tests/datafiles/pdb3hsy.pdb' adding 'prody/tests/datafiles/pdb3mht.pdb' adding 'prody/tests/datafiles/pdb3o21.pdb' adding 'prody/tests/datafiles/pdb3p3w.pdb' adding 'prody/tests/datafiles/pdb4v8r_h36.pdb' adding 'prody/tests/datafiles/pdb4v8r_hex.pdb' adding 'prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb' adding 'prody/tests/datafiles/pdbRTER.pdb' adding 'prody/tests/datafiles/rtb2gb1_hessian.coo' adding 'prody/tests/datafiles/rtb2gb1_project.coo' adding 'prody/tests/datafiles/xmlSTI.xml' adding 'prody/tests/dynamics/__init__.py' adding 'prody/tests/dynamics/test_editing.py' adding 'prody/tests/dynamics/test_enms.py' adding 'prody/tests/dynamics/test_lda.py' adding 'prody/tests/dynamics/test_pca.py' adding 'prody/tests/dynamics/test_signature.py' adding 'prody/tests/ensemble/__init__.py' adding 'prody/tests/ensemble/test_conformation.py' adding 'prody/tests/ensemble/test_ensemble.py' adding 'prody/tests/ensemble/test_functions.py' adding 'prody/tests/ensemble/test_pdbensemble.py' adding 'prody/tests/kdtree/__init__.py' adding 'prody/tests/kdtree/test_kdtree.py' adding 'prody/tests/measure/__init__.py' adding 'prody/tests/measure/test_contacts.py' adding 'prody/tests/measure/test_measure.py' adding 'prody/tests/measure/test_transform.py' adding 'prody/tests/proteins/__init__.py' adding 'prody/tests/proteins/test_ciffile.py' adding 'prody/tests/proteins/test_dssp.py' adding 'prody/tests/proteins/test_fixer.py' adding 'prody/tests/proteins/test_header.py' adding 'prody/tests/proteins/test_localpdb.py' adding 'prody/tests/proteins/test_pdbfile.py' adding 'prody/tests/proteins/test_waterbridges.py' adding 'prody/tests/proteins/test_wwpdb.py' adding 'prody/tests/sequence/__init__.py' adding 'prody/tests/sequence/test_analysis.py' adding 'prody/tests/sequence/test_msa.py' adding 'prody/tests/sequence/test_msafile.py' adding 'prody/tests/sequence/test_sequence.py' adding 'prody/tests/trajectory/__init__.py' adding 'prody/tests/trajectory/test_dcdfile.py' adding 'prody/tests/trajectory/test_frame.py' adding 'prody/tests/utilities/__init__.py' adding 'prody/tests/utilities/test_checkers.py' adding 'prody/tests/utilities/test_misctools.py' adding 'prody/tests/utilities/test_pathtools.py' adding 'prody/trajectory/__init__.py' adding 'prody/trajectory/dcdfile.py' adding 'prody/trajectory/frame.py' adding 'prody/trajectory/psffile.py' adding 'prody/trajectory/trajbase.py' adding 'prody/trajectory/trajectory.py' adding 'prody/trajectory/trajfile.py' adding 'prody/utilities/TreeConstruction.py' adding 'prody/utilities/__init__.py' adding 'prody/utilities/catchall.py' adding 'prody/utilities/checkers.py' adding 'prody/utilities/doctools.py' adding 'prody/utilities/drawtools.py' adding 'prody/utilities/eigtools.py' adding 'prody/utilities/laptools.py' adding 'prody/utilities/legacy.py' adding 'prody/utilities/logger.py' adding 'prody/utilities/misctools.py' adding 'prody/utilities/pathtools.py' adding 'prody/utilities/seqtools.py' adding 'prody/utilities/settings.py' adding 'prody/utilities/datafiles/mod_res_map.dat' adding 'prody/utilities/datafiles/saxs_water.dat' adding 'prody-2.4.1.dist-info/licenses/LICENSE.rst' adding 'prody-2.4.1.dist-info/METADATA' adding 'prody-2.4.1.dist-info/WHEEL' adding 'prody-2.4.1.dist-info/entry_points.txt' adding 'prody-2.4.1.dist-info/top_level.txt' adding 'prody-2.4.1.dist-info/RECORD' removing build/bdist.linux-s390x/wheel Building wheel for ProDy (pyproject.toml): finished with status 'done' Created wheel for ProDy: filename=prody-2.4.1-cp314-cp314-linux_s390x.whl size=22147393 sha256=aecd32c3ca3703700f8931cb0c8e6cf32f8f540a6df3ee11a11494c10ecf259e Stored in directory: /builddir/.cache/pip/wheels/09/ad/3d/6920b9054f47473d495e604135c1792ae4bffee3f26e6f22f0 Successfully built ProDy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.S8gkMV + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + '[' /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT ++ dirname /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT + mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build + mkdir /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.1 ++ ls /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/pyproject-wheeldir/prody-2.4.1-cp314-cp314-linux_s390x.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=prody==2.4.1 + '[' -z prody==2.4.1 ']' + TMPDIR=/builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/pyproject-wheeldir prody==2.4.1 Using pip 25.1.1 from /usr/lib/python3.14/site-packages/pip (python 3.14) Looking in links: /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/pyproject-wheeldir Processing ./pyproject-wheeldir/prody-2.4.1-cp314-cp314-linux_s390x.whl Installing collected packages: prody Creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin changing mode of /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/evol to 755 changing mode of /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/prody to 755 Successfully installed prody-2.4.1 + '[' -d /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/prody /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/evol: updating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/prody: updating + rm -rfv /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib/python3.14/site-packages ']' + '[' /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages '!=' /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib/python3.14/site-packages ']' + '[' -d /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages ']' + site_dirs+=("/usr/lib64/python3.14/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.14/site-packages/prody-2.4.1.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody-2.4.1.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT --record /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody-2.4.1.dist-info/RECORD --output /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-record + rm -fv /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody-2.4.1.dist-info/RECORD removed '/builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody-2.4.1.dist-info/RECORD' + rm -fv /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody-2.4.1.dist-info/REQUESTED removed '/builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody-2.4.1.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-files --output-modules /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-modules --buildroot /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT --sitelib /usr/lib/python3.14/site-packages --sitearch /usr/lib64/python3.14/site-packages --python-version 3.14 --pyproject-record /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1-15.fc43.s390x-pyproject-record --prefix /usr prody + mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + rm -f /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/prody + cd scripts + cp -pr ./prody ./python3.14-prody + cp -pr ./evol ./python3.14-evol + sed -i '1s=^#!/usr/bin/\(python\|env python\)[0-9.]*=#!/usr/bin/python3=' ./prody ./evol ./python3.14-prody ./python3.14-evol + for i in prody-3.14 + touch -r ./python3.14-prody prody-3.14 + install -p prody-3.14 /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + install -p ./prody /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + install -p ./python3.14-prody /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + ln -srf python3.14-prody /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/prody-3.14 + for i in evol-3.14 + touch -r ./python3.14-evol evol-3.14 + install -p evol-3.14 /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + install -p ./evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + install -p ./python3.14-evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + ln -srf python3.14-evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/evol-3.14 + cd .. + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.4.1-15.fc43 --unique-debug-suffix -2.4.1-15.fc43.s390x --unique-debug-src-base ProDy-2.4.1-15.fc43.s390x --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1 find-debuginfo: starting Extracting debug info from 7 files DWARF-compressing 7 files sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/ProDy-2.4.1-15.fc43.s390x find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.14 using python3.14 Bytecompiling .py files below /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14 using python3.14 /usr/lib64/python3.14/site-packages/prody/atomic/flags.py:498: SyntaxWarning: "\ " is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\ "? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/flags.py:498: SyntaxWarning: "\ " is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\ "? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:203: SyntaxWarning: "\|" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\|"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:719: SyntaxWarning: "\w" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\w"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:738: SyntaxWarning: "\w" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\w"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:757: SyntaxWarning: "\d" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\d"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:758: SyntaxWarning: "\ " is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\ "? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:761: SyntaxWarning: "\ " is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\ "? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:203: SyntaxWarning: "\|" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\|"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:719: SyntaxWarning: "\w" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\w"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:738: SyntaxWarning: "\w" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\w"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:757: SyntaxWarning: "\d" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\d"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:758: SyntaxWarning: "\ " is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\ "? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/atomic/select.py:761: SyntaxWarning: "\ " is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\ "? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/dynamics/pca.py:79: SyntaxWarning: "\_" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\_"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/dynamics/pca.py:79: SyntaxWarning: "\_" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\_"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: "\." is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\."? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: "\." is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\."? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: "\." is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\."? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/proteins/dssp.py:87: SyntaxWarning: "\*" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\*"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: "\." is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\."? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: "\." is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\."? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: "\." is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\."? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/proteins/dssp.py:87: SyntaxWarning: "\*" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\*"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/sequence/analysis.py:173: SyntaxWarning: "\{" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\{"? A raw string is also an option. /usr/lib64/python3.14/site-packages/prody/sequence/analysis.py:173: SyntaxWarning: "\{" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\{"? A raw string is also an option. + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/utilities/__pycache__/seqtools.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/utilities/__pycache__/settings.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/utilities/__pycache__/pathtools.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/utilities/__pycache__/legacy.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/utilities/__pycache__/laptools.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/utilities/__pycache__/eigtools.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/utilities/__pycache__/misctools.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/utilities/__pycache__/logger.cpython-314.opt-1.pyc: replacing with normalized version 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/builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/prody_apps/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/prody_apps/__pycache__/nmaoptions.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_refine.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_search.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_rankorder.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_filter.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_fetch.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_occupancy.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_merge.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_conserv.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.14/site-packages/prody/apps/evol_apps/__pycache__/evol_coevol.cpython-314.opt-1.pyc: rewriting with normalized contents Scanned 90 directories and 723 files, processed 236 inodes, 236 modified (52 replaced + 184 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/ProDy-2.4.1-build/SPECPARTS/rpm-debuginfo.specpart Processing files: python3-ProDy-2.4.1-15.fc43.s390x Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.L8qY6Z + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + cd ProDy-2.4.1 + DOCDIR=/builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/doc/python3-ProDy + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/doc/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/README.rst /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/doc/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 Provides: ProDy = 0:2.4.1-15.fc43 python-ProDy = 2.4.1-15.fc43 python3-ProDy = 2.4.1-15.fc43 python3-ProDy(s390-64) = 2.4.1-15.fc43 python3.14-ProDy = 2.4.1-15.fc43 python3.14dist(prody) = 2.4.1 python3dist(prody) = 2.4.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.14 python3.14dist(biopython) python3.14dist(numpy) >= 1.10 python3.14dist(pyparsing) python3.14dist(scipy) python3.14dist(setuptools) Obsoletes: python-ProDy < 2.4.1-15.fc43 Processing files: ProDy-debugsource-2.4.1-15.fc43.s390x Provides: ProDy-debugsource = 2.4.1-15.fc43 ProDy-debugsource(s390-64) = 2.4.1-15.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-ProDy-debuginfo-2.4.1-15.fc43.s390x Provides: debuginfo(build-id) = 18740ac2a98cd2d593df3095a9f3114fc523f7af debuginfo(build-id) = 4fa039aba812fdd731c10d591d54bb65477548cd debuginfo(build-id) = 695fff4b4233904914f5dc0c4634e0f4acab10c6 debuginfo(build-id) = 8229f0a04c966c66e138c9fbe009159e8d92047f debuginfo(build-id) = bc88231fd4c7aac951b746171204aa33c98f0011 debuginfo(build-id) = ccb8e8a285f0cde343a021e2d22e3d2ff21cea1b debuginfo(build-id) = e2d3cd5128d3dcf5a56e021dd00b0b6c08dd71bb python-ProDy-debuginfo = 2.4.1-15.fc43 python3-ProDy-debuginfo = 2.4.1-15.fc43 python3-ProDy-debuginfo(s390-64) = 2.4.1-15.fc43 python3.14-ProDy-debuginfo = 2.4.1-15.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: ProDy-debugsource(s390-64) = 2.4.1-15.fc43 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT Wrote: /builddir/build/SRPMS/ProDy-2.4.1-15.fc43.src.rpm Wrote: /builddir/build/RPMS/python3-ProDy-debuginfo-2.4.1-15.fc43.s390x.rpm Wrote: /builddir/build/RPMS/ProDy-debugsource-2.4.1-15.fc43.s390x.rpm Wrote: /builddir/build/RPMS/python3-ProDy-2.4.1-15.fc43.s390x.rpm Finish: rpmbuild ProDy-2.4.1-15.fc43.src.rpm Finish: build phase for ProDy-2.4.1-15.fc43.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-s390x-1754720849.198309/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/ProDy-2.4.1-15.fc43.src.rpm) Config(child) 2 minutes 2 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "ProDy", "epoch": null, "version": "2.4.1", "release": "15.fc43", "arch": "src" }, { "name": "python3-ProDy", "epoch": null, "version": "2.4.1", "release": "15.fc43", "arch": "s390x" }, { "name": "python3-ProDy-debuginfo", "epoch": null, "version": "2.4.1", "release": "15.fc43", "arch": "s390x" }, { "name": "ProDy-debugsource", "epoch": null, "version": "2.4.1", "release": "15.fc43", "arch": "s390x" } ] } RPMResults finished