Warning: Permanently added '44.193.196.94' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6422633-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 0.69 PID: 15878 Logging PID: 15879 Task: {'appstream': False, 'background': True, 'build_id': 6422633, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '1abd0a8b732b97b75e958dd5cfd3bbf548781cfd', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/saprasad/openssl-no-deprecated.checker/R-rtracklayer', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R-rtracklayer', 'package_version': '1.56.1-4%{dist}', 'project_dirname': 'openssl-no-deprecated.checker', 'project_name': 'openssl-no-deprecated.checker', 'project_owner': 'saprasad', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/saprasad/openssl-no-deprecated.checker/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'saprasad/openssl-no-deprecated.checker--saprasad', 'source_json': {}, 'source_type': None, 'submitter': 'saprasad', 'tags': [], 'task_id': '6422633-fedora-rawhide-x86_64', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/saprasad/openssl-no-deprecated.checker/R-rtracklayer /var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/saprasad/openssl-no-deprecated.checker/R-rtracklayer', '/var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer'... Running: git checkout 1abd0a8b732b97b75e958dd5cfd3bbf548781cfd -- cmd: ['git', 'checkout', '1abd0a8b732b97b75e958dd5cfd3bbf548781cfd', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer rc: 0 stdout: stderr: Note: switching to '1abd0a8b732b97b75e958dd5cfd3bbf548781cfd'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 1abd0a8 automatic import of R-rtracklayer Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading rtracklayer_1.56.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o rtracklayer_1.56.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/saprasad/openssl-no-deprecated.checker/R-rtracklayer/rtracklayer_1.56.1.tar.gz/md5/e275748ea08902f8d7cbbe6472b71276/rtracklayer_1.56.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 3923k 100 3923k 0 0 32.1M 0 --:--:-- --:--:-- --:--:-- 32.2M INFO: Reading stdout from command: md5sum rtracklayer_1.56.1.tar.gz Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer/R-rtracklayer.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1695238590.784434 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.1.1 starting (python version = 3.11.3, NVR = mock-5.1.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer/R-rtracklayer.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.1.1 INFO: Mock Version: 5.1.1 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1695238590.784434/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1695238590.784434/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/5288b99871dba9a3de6d1fe37b1c2fa693382be8695f664bddc5eb705ac4695a/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/5288b99871dba9a3de6d1fe37b1c2fa693382be8695f664bddc5eb705ac4695a/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 1.1 MB/s | 55 kB 00:00 fedora 35 MB/s | 73 MB 00:02 Package python3-dnf-4.16.2-4.fc40.noarch is already installed. Dependencies resolved. ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: python3-dnf-plugins-core noarch 4.4.2-1.fc39 fedora 293 k Installing dependencies: dbus-libs x86_64 1:1.14.10-1.fc40 fedora 155 k python3-dateutil noarch 1:2.8.2-10.fc39 fedora 355 k python3-dbus x86_64 1.3.2-4.fc39 fedora 157 k python3-distro noarch 1.8.0-6.fc39 fedora 49 k python3-six noarch 1.16.0-12.fc39 fedora 41 k python3-systemd x86_64 235-5.fc39 fedora 107 k Transaction Summary ================================================================================ Install 7 Packages Total download size: 1.1 M Installed size: 3.5 M Downloading Packages: (1/7): dbus-libs-1.14.10-1.fc40.x86_64.rpm 899 kB/s | 155 kB 00:00 (2/7): python3-distro-1.8.0-6.fc39.noarch.rpm 1.5 MB/s | 49 kB 00:00 (3/7): python3-dbus-1.3.2-4.fc39.x86_64.rpm 764 kB/s | 157 kB 00:00 (4/7): python3-six-1.16.0-12.fc39.noarch.rpm 1.1 MB/s | 41 kB 00:00 (5/7): python3-dateutil-2.8.2-10.fc39.noarch.rp 1.3 MB/s | 355 kB 00:00 (6/7): python3-dnf-plugins-core-4.4.2-1.fc39.no 4.2 MB/s | 293 kB 00:00 (7/7): python3-systemd-235-5.fc39.x86_64.rpm 2.2 MB/s | 107 kB 00:00 -------------------------------------------------------------------------------- Total 1.9 MB/s | 1.1 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-systemd-235-5.fc39.x86_64 1/7 Installing : python3-six-1.16.0-12.fc39.noarch 2/7 Installing : python3-dateutil-1:2.8.2-10.fc39.noarch 3/7 Installing : python3-distro-1.8.0-6.fc39.noarch 4/7 Installing : dbus-libs-1:1.14.10-1.fc40.x86_64 5/7 Installing : python3-dbus-1.3.2-4.fc39.x86_64 6/7 Installing : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 7/7 Running scriptlet: python3-dnf-plugins-core-4.4.2-1.fc39.noarch 7/7 Verifying : dbus-libs-1:1.14.10-1.fc40.x86_64 1/7 Verifying : python3-dateutil-1:2.8.2-10.fc39.noarch 2/7 Verifying : python3-dbus-1.3.2-4.fc39.x86_64 3/7 Verifying : python3-distro-1.8.0-6.fc39.noarch 4/7 Verifying : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 5/7 Verifying : python3-six-1.16.0-12.fc39.noarch 6/7 Verifying : python3-systemd-235-5.fc39.x86_64 7/7 Installed: dbus-libs-1:1.14.10-1.fc40.x86_64 python3-dateutil-1:2.8.2-10.fc39.noarch python3-dbus-1.3.2-4.fc39.x86_64 python3-distro-1.8.0-6.fc39.noarch python3-dnf-plugins-core-4.4.2-1.fc39.noarch python3-six-1.16.0-12.fc39.noarch python3-systemd-235-5.fc39.x86_64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1695238590.784434/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 88 kB/s | 1.5 kB 00:00 Copr repository 1.7 MB/s | 55 kB 00:00 fedora 61 kB/s | 19 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.15-5.fc39 fedora 1.8 M bzip2 x86_64 1.0.8-16.fc39 fedora 52 k coreutils x86_64 9.4-1.fc40 fedora 1.1 M cpio x86_64 2.14-4.fc39 fedora 279 k diffutils x86_64 3.10-3.fc39 fedora 398 k fedora-release-common noarch 40-0.7 fedora 18 k findutils x86_64 1:4.9.0-6.fc40 fedora 492 k gawk x86_64 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.38.9000-9.fc40 fedora 74 k grep x86_64 3.11-5.fc40 fedora 298 k gzip x86_64 1.12-6.fc39 fedora 166 k info x86_64 7.0.3-3.fc39 fedora 182 k patch x86_64 2.7.6-22.fc39 fedora 125 k redhat-rpm-config noarch 266-1.fc40 fedora 80 k rpm-build x86_64 4.19.0-1.fc40 fedora 79 k sed x86_64 4.8-14.fc39 fedora 306 k shadow-utils x86_64 2:4.14.0-1.fc40 fedora 1.3 M tar x86_64 2:1.35-2.fc40 fedora 864 k unzip x86_64 6.0-62.fc39 fedora 184 k util-linux x86_64 2.39.2-1.fc40 fedora 1.2 M which x86_64 2.21-40.fc39 fedora 42 k xz x86_64 5.4.4-1.fc39 fedora 556 k Installing dependencies: alternatives x86_64 1.25-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-11.fc39 fedora 21 k audit-libs x86_64 3.1.2-4.fc40 fedora 117 k authselect x86_64 1.4.2-3.fc39 fedora 144 k authselect-libs x86_64 1.4.2-3.fc39 fedora 249 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils x86_64 2.41-5.fc40 fedora 6.3 M binutils-gold x86_64 2.41-5.fc40 fedora 796 k bzip2-libs x86_64 1.0.8-16.fc39 fedora 41 k ca-certificates noarch 2023.2.60_v7.0.306-3.fc40 fedora 837 k coreutils-common x86_64 9.4-1.fc40 fedora 2.1 M cracklib x86_64 2.9.11-2.fc39 fedora 94 k crypto-policies noarch 20230731-1.git5ed06e0.fc39 fedora 99 k curl x86_64 8.3.0-1.fc40 fedora 354 k cyrus-sasl-lib x86_64 2.1.28-11.fc39 fedora 793 k debugedit x86_64 5.0-10.fc39 fedora 77 k dwz x86_64 0.15-3.fc39 fedora 134 k ed x86_64 1.19-4.fc39 fedora 79 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils x86_64 0.189-6.fc40 fedora 535 k elfutils-debuginfod-client x86_64 0.189-6.fc40 fedora 38 k elfutils-default-yama-scope noarch 0.189-6.fc40 fedora 13 k elfutils-libelf x86_64 0.189-6.fc40 fedora 195 k elfutils-libs x86_64 0.189-6.fc40 fedora 258 k fedora-gpg-keys noarch 40-0.1 fedora 130 k fedora-release noarch 40-0.7 fedora 8.0 k fedora-release-identity-basic noarch 40-0.7 fedora 8.8 k fedora-repos noarch 40-0.1 fedora 9.4 k fedora-repos-rawhide noarch 40-0.1 fedora 9.0 k file x86_64 5.45-1.fc40 fedora 49 k file-libs x86_64 5.45-1.fc40 fedora 763 k filesystem x86_64 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k forge-srpm-macros noarch 0.1.0-1.fc40 fedora 18 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal x86_64 13.2-9.fc40 fedora 4.2 M gdbm-libs x86_64 1:1.23-4.fc39 fedora 56 k ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k glibc x86_64 2.38.9000-9.fc40 fedora 2.2 M glibc-common x86_64 2.38.9000-9.fc40 fedora 356 k glibc-gconv-extra x86_64 2.38.9000-9.fc40 fedora 1.6 M gmp x86_64 1:6.2.1-5.fc39 fedora 313 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.2.0-7.fc40 fedora 27 k jansson x86_64 2.13.1-7.fc39 fedora 44 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs x86_64 1.6.1-7.fc39 fedora 31 k krb5-libs x86_64 1.21.2-1.fc40 fedora 765 k libacl x86_64 2.3.1-9.fc40 fedora 23 k libarchive x86_64 3.7.2-1.fc40 fedora 408 k libattr x86_64 2.5.1-9.fc40 fedora 18 k libblkid x86_64 2.39.2-1.fc40 fedora 116 k libbrotli x86_64 1.1.0-1.fc40 fedora 336 k libcap x86_64 2.48-7.fc39 fedora 68 k libcap-ng x86_64 0.8.3-8.fc40 fedora 32 k libcom_err x86_64 1.47.0-2.fc39 fedora 26 k libcurl x86_64 8.3.0-1.fc40 fedora 344 k libdb x86_64 5.3.28-58.fc40 fedora 759 k libeconf x86_64 0.5.2-1.fc40 fedora 30 k libevent x86_64 2.1.12-9.fc39 fedora 258 k libfdisk x86_64 2.39.2-1.fc40 fedora 162 k libffi x86_64 3.4.4-4.fc39 fedora 40 k libgcc x86_64 13.2.1-3.fc40 fedora 110 k libgomp x86_64 13.2.1-3.fc40 fedora 319 k libidn2 x86_64 2.3.4-3.fc39 fedora 117 k libmount x86_64 2.39.2-1.fc40 fedora 154 k libnghttp2 x86_64 1.56.0-1.fc40 fedora 75 k libnsl2 x86_64 2.0.0-6.fc39 fedora 30 k libpkgconf x86_64 1.9.5-2.fc39 fedora 38 k libpsl x86_64 0.21.2-4.fc39 fedora 63 k libpwquality x86_64 1.4.5-6.fc39 fedora 120 k libselinux x86_64 3.5-5.fc39 fedora 87 k libsemanage x86_64 3.5-4.fc39 fedora 120 k libsepol x86_64 3.5-2.fc39 fedora 324 k libsigsegv x86_64 2.14-5.fc39 fedora 27 k libsmartcols x86_64 2.39.2-1.fc40 fedora 67 k libssh x86_64 0.10.5-2.fc39 fedora 211 k libssh-config noarch 0.10.5-2.fc39 fedora 9.2 k libstdc++ x86_64 13.2.1-3.fc40 fedora 861 k libtasn1 x86_64 4.19.0-3.fc39 fedora 74 k libtirpc x86_64 1.3.3-1.rc2.fc39 fedora 94 k libunistring x86_64 1.1-5.fc40 fedora 543 k libutempter x86_64 1.2.1-10.fc39 fedora 26 k libuuid x86_64 2.39.2-1.fc40 fedora 28 k libverto x86_64 0.3.2-6.fc39 fedora 20 k libxcrypt x86_64 4.4.36-2.fc39 fedora 119 k libxml2 x86_64 2.11.5-1.fc40 fedora 698 k libzstd x86_64 1.5.5-4.fc39 fedora 309 k lua-libs x86_64 5.4.6-3.fc39 fedora 133 k lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k lz4-libs x86_64 1.9.4-4.fc39 fedora 67 k mpfr x86_64 4.2.0-3.fc39 fedora 344 k ncurses-base noarch 6.4-7.20230520.fc40 fedora 88 k ncurses-libs x86_64 6.4-7.20230520.fc40 fedora 337 k ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap x86_64 2.6.6-1.fc39 fedora 255 k openssl-libs x86_64 1:3.1.1-4.fc40 fedora 2.2 M p11-kit x86_64 0.25.0-2.fc39 fedora 486 k p11-kit-trust x86_64 0.25.0-2.fc39 fedora 142 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam x86_64 1.5.3-2.fc39 fedora 548 k pam-libs x86_64 1.5.3-2.fc39 fedora 58 k pcre2 x86_64 10.42-1.fc39.2 fedora 233 k pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf x86_64 1.9.5-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.5-2.fc39 fedora 9.6 k popt x86_64 1.19-3.fc39 fedora 66 k publicsuffix-list-dafsa noarch 20230812-1.fc40 fedora 57 k pyproject-srpm-macros noarch 1.9.0-2.fc39 fedora 14 k python-srpm-macros noarch 3.12-4.fc40 fedora 25 k qt5-srpm-macros noarch 5.15.10-2.fc39 fedora 8.3 k qt6-srpm-macros noarch 6.5.2-3.fc40 fedora 9.0 k readline x86_64 8.2-4.fc39 fedora 213 k rpm x86_64 4.19.0-1.fc40 fedora 538 k rpm-build-libs x86_64 4.19.0-1.fc40 fedora 96 k rpm-libs x86_64 4.19.0-1.fc40 fedora 312 k rpm-sequoia x86_64 1.5.0-1.fc40 fedora 883 k rust-srpm-macros noarch 24-5.fc40 fedora 12 k setup noarch 2.14.4-1.fc39 fedora 154 k sqlite-libs x86_64 3.43.1-1.fc40 fedora 688 k systemd-libs x86_64 254.2-12.fc40 fedora 688 k util-linux-core x86_64 2.39.2-1.fc40 fedora 493 k xxhash-libs x86_64 0.8.2-1.fc39 fedora 37 k xz-libs x86_64 5.4.4-1.fc39 fedora 108 k zip x86_64 3.0-39.fc40 fedora 266 k zlib x86_64 1.2.13-4.fc39 fedora 94 k zstd x86_64 1.5.5-4.fc39 fedora 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 152 Packages Total size: 53 M Installed size: 181 M Downloading Packages: [SKIPPED] alternatives-1.25-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-11.fc39.noarch.rpm: Already downloaded [SKIPPED] audit-libs-3.1.2-4.fc40.x86_64.rpm: Already downloaded [SKIPPED] authselect-1.4.2-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.2-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-18.fc39.noarch.rpm: Already downloaded [SKIPPED] bash-5.2.15-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] binutils-2.41-5.fc40.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.41-5.fc40.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-16.fc39.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-16.fc39.x86_64.rpm: Already downloaded [SKIPPED] ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch.rpm: Already downloaded [SKIPPED] coreutils-9.4-1.fc40.x86_64.rpm: Already downloaded [SKIPPED] coreutils-common-9.4-1.fc40.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.14-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] cracklib-2.9.11-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-20230731-1.git5ed06e0.fc39.noarch.rpm: Already downloaded [SKIPPED] curl-8.3.0-1.fc40.x86_64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-11.fc39.x86_64.rpm: Already downloaded [SKIPPED] debugedit-5.0-10.fc39.x86_64.rpm: Already downloaded [SKIPPED] diffutils-3.10-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] dwz-0.15-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] ed-1.19-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-9.fc39.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.189-6.fc40.x86_64.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.189-6.fc40.x86_64.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.189-6.fc40.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.189-6.fc40.x86_64.rpm: Already downloaded [SKIPPED] elfutils-libs-0.189-6.fc40.x86_64.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-40-0.1.noarch.rpm: Already downloaded [SKIPPED] fedora-release-40-0.7.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-40-0.7.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-40-0.7.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-40-0.1.noarch.rpm: 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1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-3.fc40.x86_64 1/152 Running scriptlet: libgcc-13.2.1-3.fc40.x86_64 1/152 Installing : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 2/152 Running scriptlet: crypto-policies-20230731-1.git5ed06e0.fc39.noarc 2/152 Installing : fedora-release-identity-basic-40-0.7.noarch 3/152 Installing : fedora-repos-rawhide-40-0.1.noarch 4/152 Installing : fedora-gpg-keys-40-0.1.noarch 5/152 Installing : fedora-repos-40-0.1.noarch 6/152 Installing : fedora-release-common-40-0.7.noarch 7/152 Installing : fedora-release-40-0.7.noarch 8/152 Installing : setup-2.14.4-1.fc39.noarch 9/152 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.4-1.fc39.noarch 9/152 Installing : filesystem-3.18-6.fc39.x86_64 10/152 Installing : basesystem-11-18.fc39.noarch 11/152 Installing : rust-srpm-macros-24-5.fc40.noarch 12/152 Installing : qt6-srpm-macros-6.5.2-3.fc40.noarch 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Installing : cyrus-sasl-lib-2.1.28-11.fc39.x86_64 86/152 Installing : keyutils-libs-1.6.1-7.fc39.x86_64 87/152 Installing : libbrotli-1.1.0-1.fc40.x86_64 88/152 Installing : libdb-5.3.28-58.fc40.x86_64 89/152 Installing : libeconf-0.5.2-1.fc40.x86_64 90/152 Installing : shadow-utils-2:4.14.0-1.fc40.x86_64 91/152 Running scriptlet: libutempter-1.2.1-10.fc39.x86_64 92/152 Installing : libutempter-1.2.1-10.fc39.x86_64 92/152 Installing : libffi-3.4.4-4.fc39.x86_64 93/152 Installing : p11-kit-0.25.0-2.fc39.x86_64 94/152 Installing : libgomp-13.2.1-3.fc40.x86_64 95/152 Installing : libnghttp2-1.56.0-1.fc40.x86_64 96/152 Installing : libpkgconf-1.9.5-2.fc39.x86_64 97/152 Installing : pkgconf-1.9.5-2.fc39.x86_64 98/152 Installing : pkgconf-pkg-config-1.9.5-2.fc39.x86_64 99/152 Installing : libsigsegv-2.14-5.fc39.x86_64 100/152 Installing : gawk-5.2.2-2.fc39.x86_64 101/152 Installing : libtasn1-4.19.0-3.fc39.x86_64 102/152 Installing : p11-kit-trust-0.25.0-2.fc39.x86_64 103/152 Running scriptlet: p11-kit-trust-0.25.0-2.fc39.x86_64 103/152 Installing : libverto-0.3.2-6.fc39.x86_64 104/152 Installing : xxhash-libs-0.8.2-1.fc39.x86_64 105/152 Installing : libssh-config-0.10.5-2.fc39.noarch 106/152 Installing : kernel-srpm-macros-1.0-20.fc39.noarch 107/152 Installing : gnat-srpm-macros-6-3.fc39.noarch 108/152 Installing : ghc-srpm-macros-1.6.1-2.fc39.noarch 109/152 Installing : fpc-srpm-macros-1.3-8.fc39.noarch 110/152 Installing : coreutils-common-9.4-1.fc40.x86_64 111/152 Installing : openssl-libs-1:3.1.1-4.fc40.x86_64 112/152 Installing : coreutils-9.4-1.fc40.x86_64 113/152 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 114/152 Installing : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 114/152 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 114/152 Installing : krb5-libs-1.21.2-1.fc40.x86_64 115/152 Installing : libtirpc-1.3.3-1.rc2.fc39.x86_64 116/152 Running scriptlet: authselect-libs-1.4.2-3.fc39.x86_64 117/152 Installing : authselect-libs-1.4.2-3.fc39.x86_64 117/152 Installing : gzip-1.12-6.fc39.x86_64 118/152 Installing : cracklib-2.9.11-2.fc39.x86_64 119/152 Installing : libpwquality-1.4.5-6.fc39.x86_64 120/152 Installing : authselect-1.4.2-3.fc39.x86_64 121/152 Installing : libnsl2-2.0.0-6.fc39.x86_64 122/152 Installing : pam-1.5.3-2.fc39.x86_64 123/152 Installing : libssh-0.10.5-2.fc39.x86_64 124/152 Installing : libarchive-3.7.2-1.fc40.x86_64 125/152 Installing : libevent-2.1.12-9.fc39.x86_64 126/152 Installing : openldap-2.6.6-1.fc39.x86_64 127/152 Installing : libcurl-8.3.0-1.fc40.x86_64 128/152 Installing : elfutils-libs-0.189-6.fc40.x86_64 129/152 Installing : elfutils-debuginfod-client-0.189-6.fc40.x86_64 130/152 Installing : binutils-gold-2.41-5.fc40.x86_64 131/152 Running scriptlet: binutils-gold-2.41-5.fc40.x86_64 131/152 Installing : binutils-2.41-5.fc40.x86_64 132/152 Running scriptlet: binutils-2.41-5.fc40.x86_64 132/152 Installing : elfutils-0.189-6.fc40.x86_64 133/152 Installing : gdb-minimal-13.2-9.fc40.x86_64 134/152 Installing : debugedit-5.0-10.fc39.x86_64 135/152 Installing : curl-8.3.0-1.fc40.x86_64 136/152 Installing : rpm-sequoia-1.5.0-1.fc40.x86_64 137/152 Installing : rpm-libs-4.19.0-1.fc40.x86_64 138/152 Running scriptlet: rpm-4.19.0-1.fc40.x86_64 139/152 Installing : rpm-4.19.0-1.fc40.x86_64 139/152 Installing : efi-srpm-macros-5-9.fc39.noarch 140/152 Installing : lua-srpm-macros-1-9.fc39.noarch 141/152 Installing : rpm-build-libs-4.19.0-1.fc40.x86_64 142/152 Installing : ansible-srpm-macros-1-11.fc39.noarch 143/152 Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 144/152 Installing : forge-srpm-macros-0.1.0-1.fc40.noarch 145/152 Installing : go-srpm-macros-3.2.0-7.fc40.noarch 146/152 Installing : python-srpm-macros-3.12-4.fc40.noarch 147/152 Installing : redhat-rpm-config-266-1.fc40.noarch 148/152 Installing : rpm-build-4.19.0-1.fc40.x86_64 149/152 Installing : util-linux-2.39.2-1.fc40.x86_64 150/152 Installing : which-2.21-40.fc39.x86_64 151/152 Installing : info-7.0.3-3.fc39.x86_64 152/152 Running scriptlet: filesystem-3.18-6.fc39.x86_64 152/152 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 152/152 Running scriptlet: authselect-libs-1.4.2-3.fc39.x86_64 152/152 Running scriptlet: rpm-4.19.0-1.fc40.x86_64 152/152 Running scriptlet: info-7.0.3-3.fc39.x86_64 152/152 Verifying : alternatives-1.25-1.fc39.x86_64 1/152 Verifying : ansible-srpm-macros-1-11.fc39.noarch 2/152 Verifying : audit-libs-3.1.2-4.fc40.x86_64 3/152 Verifying : authselect-1.4.2-3.fc39.x86_64 4/152 Verifying : authselect-libs-1.4.2-3.fc39.x86_64 5/152 Verifying : basesystem-11-18.fc39.noarch 6/152 Verifying : bash-5.2.15-5.fc39.x86_64 7/152 Verifying : binutils-2.41-5.fc40.x86_64 8/152 Verifying : binutils-gold-2.41-5.fc40.x86_64 9/152 Verifying : bzip2-1.0.8-16.fc39.x86_64 10/152 Verifying : bzip2-libs-1.0.8-16.fc39.x86_64 11/152 Verifying : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 12/152 Verifying : coreutils-9.4-1.fc40.x86_64 13/152 Verifying : coreutils-common-9.4-1.fc40.x86_64 14/152 Verifying : cpio-2.14-4.fc39.x86_64 15/152 Verifying : cracklib-2.9.11-2.fc39.x86_64 16/152 Verifying : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 17/152 Verifying : curl-8.3.0-1.fc40.x86_64 18/152 Verifying : cyrus-sasl-lib-2.1.28-11.fc39.x86_64 19/152 Verifying : debugedit-5.0-10.fc39.x86_64 20/152 Verifying : diffutils-3.10-3.fc39.x86_64 21/152 Verifying : dwz-0.15-3.fc39.x86_64 22/152 Verifying : ed-1.19-4.fc39.x86_64 23/152 Verifying : efi-srpm-macros-5-9.fc39.noarch 24/152 Verifying : elfutils-0.189-6.fc40.x86_64 25/152 Verifying : elfutils-debuginfod-client-0.189-6.fc40.x86_64 26/152 Verifying : elfutils-default-yama-scope-0.189-6.fc40.noarch 27/152 Verifying : elfutils-libelf-0.189-6.fc40.x86_64 28/152 Verifying : elfutils-libs-0.189-6.fc40.x86_64 29/152 Verifying : fedora-gpg-keys-40-0.1.noarch 30/152 Verifying : fedora-release-40-0.7.noarch 31/152 Verifying : fedora-release-common-40-0.7.noarch 32/152 Verifying : fedora-release-identity-basic-40-0.7.noarch 33/152 Verifying : fedora-repos-40-0.1.noarch 34/152 Verifying : fedora-repos-rawhide-40-0.1.noarch 35/152 Verifying : file-5.45-1.fc40.x86_64 36/152 Verifying : file-libs-5.45-1.fc40.x86_64 37/152 Verifying : filesystem-3.18-6.fc39.x86_64 38/152 Verifying : findutils-1:4.9.0-6.fc40.x86_64 39/152 Verifying : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 40/152 Verifying : forge-srpm-macros-0.1.0-1.fc40.noarch 41/152 Verifying : fpc-srpm-macros-1.3-8.fc39.noarch 42/152 Verifying : gawk-5.2.2-2.fc39.x86_64 43/152 Verifying : gdb-minimal-13.2-9.fc40.x86_64 44/152 Verifying : gdbm-libs-1:1.23-4.fc39.x86_64 45/152 Verifying : ghc-srpm-macros-1.6.1-2.fc39.noarch 46/152 Verifying : glibc-2.38.9000-9.fc40.x86_64 47/152 Verifying : glibc-common-2.38.9000-9.fc40.x86_64 48/152 Verifying : glibc-gconv-extra-2.38.9000-9.fc40.x86_64 49/152 Verifying : glibc-minimal-langpack-2.38.9000-9.fc40.x86_64 50/152 Verifying : gmp-1:6.2.1-5.fc39.x86_64 51/152 Verifying : gnat-srpm-macros-6-3.fc39.noarch 52/152 Verifying : go-srpm-macros-3.2.0-7.fc40.noarch 53/152 Verifying : grep-3.11-5.fc40.x86_64 54/152 Verifying : gzip-1.12-6.fc39.x86_64 55/152 Verifying : info-7.0.3-3.fc39.x86_64 56/152 Verifying : jansson-2.13.1-7.fc39.x86_64 57/152 Verifying : kernel-srpm-macros-1.0-20.fc39.noarch 58/152 Verifying : keyutils-libs-1.6.1-7.fc39.x86_64 59/152 Verifying : krb5-libs-1.21.2-1.fc40.x86_64 60/152 Verifying : libacl-2.3.1-9.fc40.x86_64 61/152 Verifying : libarchive-3.7.2-1.fc40.x86_64 62/152 Verifying : libattr-2.5.1-9.fc40.x86_64 63/152 Verifying : libblkid-2.39.2-1.fc40.x86_64 64/152 Verifying : libbrotli-1.1.0-1.fc40.x86_64 65/152 Verifying : libcap-2.48-7.fc39.x86_64 66/152 Verifying : libcap-ng-0.8.3-8.fc40.x86_64 67/152 Verifying : libcom_err-1.47.0-2.fc39.x86_64 68/152 Verifying : libcurl-8.3.0-1.fc40.x86_64 69/152 Verifying : libdb-5.3.28-58.fc40.x86_64 70/152 Verifying : libeconf-0.5.2-1.fc40.x86_64 71/152 Verifying : libevent-2.1.12-9.fc39.x86_64 72/152 Verifying : libfdisk-2.39.2-1.fc40.x86_64 73/152 Verifying : libffi-3.4.4-4.fc39.x86_64 74/152 Verifying : libgcc-13.2.1-3.fc40.x86_64 75/152 Verifying : libgomp-13.2.1-3.fc40.x86_64 76/152 Verifying : libidn2-2.3.4-3.fc39.x86_64 77/152 Verifying : libmount-2.39.2-1.fc40.x86_64 78/152 Verifying : libnghttp2-1.56.0-1.fc40.x86_64 79/152 Verifying : libnsl2-2.0.0-6.fc39.x86_64 80/152 Verifying : libpkgconf-1.9.5-2.fc39.x86_64 81/152 Verifying : libpsl-0.21.2-4.fc39.x86_64 82/152 Verifying : libpwquality-1.4.5-6.fc39.x86_64 83/152 Verifying : libselinux-3.5-5.fc39.x86_64 84/152 Verifying : libsemanage-3.5-4.fc39.x86_64 85/152 Verifying : libsepol-3.5-2.fc39.x86_64 86/152 Verifying : libsigsegv-2.14-5.fc39.x86_64 87/152 Verifying : libsmartcols-2.39.2-1.fc40.x86_64 88/152 Verifying : libssh-0.10.5-2.fc39.x86_64 89/152 Verifying : libssh-config-0.10.5-2.fc39.noarch 90/152 Verifying : libstdc++-13.2.1-3.fc40.x86_64 91/152 Verifying : libtasn1-4.19.0-3.fc39.x86_64 92/152 Verifying : libtirpc-1.3.3-1.rc2.fc39.x86_64 93/152 Verifying : libunistring-1.1-5.fc40.x86_64 94/152 Verifying : libutempter-1.2.1-10.fc39.x86_64 95/152 Verifying : libuuid-2.39.2-1.fc40.x86_64 96/152 Verifying : libverto-0.3.2-6.fc39.x86_64 97/152 Verifying : libxcrypt-4.4.36-2.fc39.x86_64 98/152 Verifying : libxml2-2.11.5-1.fc40.x86_64 99/152 Verifying : libzstd-1.5.5-4.fc39.x86_64 100/152 Verifying : lua-libs-5.4.6-3.fc39.x86_64 101/152 Verifying : lua-srpm-macros-1-9.fc39.noarch 102/152 Verifying : lz4-libs-1.9.4-4.fc39.x86_64 103/152 Verifying : mpfr-4.2.0-3.fc39.x86_64 104/152 Verifying : ncurses-base-6.4-7.20230520.fc40.noarch 105/152 Verifying : ncurses-libs-6.4-7.20230520.fc40.x86_64 106/152 Verifying : ocaml-srpm-macros-8-2.fc39.noarch 107/152 Verifying : openblas-srpm-macros-2-14.fc39.noarch 108/152 Verifying : openldap-2.6.6-1.fc39.x86_64 109/152 Verifying : openssl-libs-1:3.1.1-4.fc40.x86_64 110/152 Verifying : p11-kit-0.25.0-2.fc39.x86_64 111/152 Verifying : p11-kit-trust-0.25.0-2.fc39.x86_64 112/152 Verifying : package-notes-srpm-macros-0.5-9.fc39.noarch 113/152 Verifying : pam-1.5.3-2.fc39.x86_64 114/152 Verifying : pam-libs-1.5.3-2.fc39.x86_64 115/152 Verifying : patch-2.7.6-22.fc39.x86_64 116/152 Verifying : pcre2-10.42-1.fc39.2.x86_64 117/152 Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 118/152 Verifying : perl-srpm-macros-1-51.fc39.noarch 119/152 Verifying : pkgconf-1.9.5-2.fc39.x86_64 120/152 Verifying : pkgconf-m4-1.9.5-2.fc39.noarch 121/152 Verifying : pkgconf-pkg-config-1.9.5-2.fc39.x86_64 122/152 Verifying : popt-1.19-3.fc39.x86_64 123/152 Verifying : publicsuffix-list-dafsa-20230812-1.fc40.noarch 124/152 Verifying : pyproject-srpm-macros-1.9.0-2.fc39.noarch 125/152 Verifying : python-srpm-macros-3.12-4.fc40.noarch 126/152 Verifying : qt5-srpm-macros-5.15.10-2.fc39.noarch 127/152 Verifying : qt6-srpm-macros-6.5.2-3.fc40.noarch 128/152 Verifying : readline-8.2-4.fc39.x86_64 129/152 Verifying : redhat-rpm-config-266-1.fc40.noarch 130/152 Verifying : rpm-4.19.0-1.fc40.x86_64 131/152 Verifying : rpm-build-4.19.0-1.fc40.x86_64 132/152 Verifying : rpm-build-libs-4.19.0-1.fc40.x86_64 133/152 Verifying : rpm-libs-4.19.0-1.fc40.x86_64 134/152 Verifying : rpm-sequoia-1.5.0-1.fc40.x86_64 135/152 Verifying : rust-srpm-macros-24-5.fc40.noarch 136/152 Verifying : sed-4.8-14.fc39.x86_64 137/152 Verifying : setup-2.14.4-1.fc39.noarch 138/152 Verifying : shadow-utils-2:4.14.0-1.fc40.x86_64 139/152 Verifying : sqlite-libs-3.43.1-1.fc40.x86_64 140/152 Verifying : systemd-libs-254.2-12.fc40.x86_64 141/152 Verifying : tar-2:1.35-2.fc40.x86_64 142/152 Verifying : unzip-6.0-62.fc39.x86_64 143/152 Verifying : util-linux-2.39.2-1.fc40.x86_64 144/152 Verifying : util-linux-core-2.39.2-1.fc40.x86_64 145/152 Verifying : which-2.21-40.fc39.x86_64 146/152 Verifying : xxhash-libs-0.8.2-1.fc39.x86_64 147/152 Verifying : xz-5.4.4-1.fc39.x86_64 148/152 Verifying : xz-libs-5.4.4-1.fc39.x86_64 149/152 Verifying : zip-3.0-39.fc40.x86_64 150/152 Verifying : zlib-1.2.13-4.fc39.x86_64 151/152 Verifying : zstd-1.5.5-4.fc39.x86_64 152/152 Installed: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-4.fc40.x86_64 authselect-1.4.2-3.fc39.x86_64 authselect-libs-1.4.2-3.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.15-5.fc39.x86_64 binutils-2.41-5.fc40.x86_64 binutils-gold-2.41-5.fc40.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch coreutils-9.4-1.fc40.x86_64 coreutils-common-9.4-1.fc40.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20230731-1.git5ed06e0.fc39.noarch curl-8.3.0-1.fc40.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-10.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.189-6.fc40.x86_64 elfutils-debuginfod-client-0.189-6.fc40.x86_64 elfutils-default-yama-scope-0.189-6.fc40.noarch elfutils-libelf-0.189-6.fc40.x86_64 elfutils-libs-0.189-6.fc40.x86_64 fedora-gpg-keys-40-0.1.noarch fedora-release-40-0.7.noarch fedora-release-common-40-0.7.noarch fedora-release-identity-basic-40-0.7.noarch fedora-repos-40-0.1.noarch fedora-repos-rawhide-40-0.1.noarch file-5.45-1.fc40.x86_64 file-libs-5.45-1.fc40.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-1:4.9.0-6.fc40.x86_64 fonts-srpm-macros-1:2.0.5-12.fc39.noarch forge-srpm-macros-0.1.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-13.2-9.fc40.x86_64 gdbm-libs-1:1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38.9000-9.fc40.x86_64 glibc-common-2.38.9000-9.fc40.x86_64 glibc-gconv-extra-2.38.9000-9.fc40.x86_64 glibc-minimal-langpack-2.38.9000-9.fc40.x86_64 gmp-1:6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.2.0-7.fc40.noarch grep-3.11-5.fc40.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-1.fc40.x86_64 libacl-2.3.1-9.fc40.x86_64 libarchive-3.7.2-1.fc40.x86_64 libattr-2.5.1-9.fc40.x86_64 libblkid-2.39.2-1.fc40.x86_64 libbrotli-1.1.0-1.fc40.x86_64 libcap-2.48-7.fc39.x86_64 libcap-ng-0.8.3-8.fc40.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.3.0-1.fc40.x86_64 libdb-5.3.28-58.fc40.x86_64 libeconf-0.5.2-1.fc40.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.2-1.fc40.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-3.fc40.x86_64 libgomp-13.2.1-3.fc40.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.2-1.fc40.x86_64 libnghttp2-1.56.0-1.fc40.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.2-1.fc40.x86_64 libssh-0.10.5-2.fc39.x86_64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-3.fc40.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.3-1.rc2.fc39.x86_64 libunistring-1.1-5.fc40.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.2-1.fc40.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.11.5-1.fc40.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc40.noarch ncurses-libs-6.4-7.20230520.fc40.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-1:3.1.1-4.fc40.x86_64 p11-kit-0.25.0-2.fc39.x86_64 p11-kit-trust-0.25.0-2.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-2.fc39.x86_64 pam-libs-1.5.3-2.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.9.0-2.fc39.noarch python-srpm-macros-3.12-4.fc40.noarch qt5-srpm-macros-5.15.10-2.fc39.noarch qt6-srpm-macros-6.5.2-3.fc40.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-266-1.fc40.noarch rpm-4.19.0-1.fc40.x86_64 rpm-build-4.19.0-1.fc40.x86_64 rpm-build-libs-4.19.0-1.fc40.x86_64 rpm-libs-4.19.0-1.fc40.x86_64 rpm-sequoia-1.5.0-1.fc40.x86_64 rust-srpm-macros-24-5.fc40.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.14.0-1.fc40.x86_64 sqlite-libs-3.43.1-1.fc40.x86_64 systemd-libs-254.2-12.fc40.x86_64 tar-2:1.35-2.fc40.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.2-1.fc40.x86_64 util-linux-core-2.39.2-1.fc40.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc40.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-4.fc40.x86_64 authselect-1.4.2-3.fc39.x86_64 authselect-libs-1.4.2-3.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.15-5.fc39.x86_64 binutils-2.41-5.fc40.x86_64 binutils-gold-2.41-5.fc40.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch coreutils-9.4-1.fc40.x86_64 coreutils-common-9.4-1.fc40.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20230731-1.git5ed06e0.fc39.noarch curl-8.3.0-1.fc40.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-10.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.189-6.fc40.x86_64 elfutils-debuginfod-client-0.189-6.fc40.x86_64 elfutils-default-yama-scope-0.189-6.fc40.noarch elfutils-libelf-0.189-6.fc40.x86_64 elfutils-libs-0.189-6.fc40.x86_64 fedora-gpg-keys-40-0.1.noarch fedora-release-40-0.7.noarch fedora-release-common-40-0.7.noarch fedora-release-identity-basic-40-0.7.noarch fedora-repos-40-0.1.noarch fedora-repos-rawhide-40-0.1.noarch file-5.45-1.fc40.x86_64 file-libs-5.45-1.fc40.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-4.9.0-6.fc40.x86_64 fonts-srpm-macros-2.0.5-12.fc39.noarch forge-srpm-macros-0.1.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-13.2-9.fc40.x86_64 gdbm-libs-1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38.9000-9.fc40.x86_64 glibc-common-2.38.9000-9.fc40.x86_64 glibc-gconv-extra-2.38.9000-9.fc40.x86_64 glibc-minimal-langpack-2.38.9000-9.fc40.x86_64 gmp-6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.2.0-7.fc40.noarch gpg-pubkey-18b8e74c-62f2920f gpg-pubkey-a15b79cc-63d04c2c grep-3.11-5.fc40.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-1.fc40.x86_64 libacl-2.3.1-9.fc40.x86_64 libarchive-3.7.2-1.fc40.x86_64 libattr-2.5.1-9.fc40.x86_64 libblkid-2.39.2-1.fc40.x86_64 libbrotli-1.1.0-1.fc40.x86_64 libcap-2.48-7.fc39.x86_64 libcap-ng-0.8.3-8.fc40.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.3.0-1.fc40.x86_64 libdb-5.3.28-58.fc40.x86_64 libeconf-0.5.2-1.fc40.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.2-1.fc40.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-3.fc40.x86_64 libgomp-13.2.1-3.fc40.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.2-1.fc40.x86_64 libnghttp2-1.56.0-1.fc40.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.2-1.fc40.x86_64 libssh-0.10.5-2.fc39.x86_64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-3.fc40.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.3-1.rc2.fc39.x86_64 libunistring-1.1-5.fc40.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.2-1.fc40.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.11.5-1.fc40.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc40.noarch ncurses-libs-6.4-7.20230520.fc40.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-3.1.1-4.fc40.x86_64 p11-kit-0.25.0-2.fc39.x86_64 p11-kit-trust-0.25.0-2.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-2.fc39.x86_64 pam-libs-1.5.3-2.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.9.0-2.fc39.noarch python-srpm-macros-3.12-4.fc40.noarch qt5-srpm-macros-5.15.10-2.fc39.noarch qt6-srpm-macros-6.5.2-3.fc40.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-266-1.fc40.noarch rpm-4.19.0-1.fc40.x86_64 rpm-build-4.19.0-1.fc40.x86_64 rpm-build-libs-4.19.0-1.fc40.x86_64 rpm-libs-4.19.0-1.fc40.x86_64 rpm-sequoia-1.5.0-1.fc40.x86_64 rust-srpm-macros-24-5.fc40.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-4.14.0-1.fc40.x86_64 sqlite-libs-3.43.1-1.fc40.x86_64 systemd-libs-254.2-12.fc40.x86_64 tar-1.35-2.fc40.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.2-1.fc40.x86_64 util-linux-core-2.39.2-1.fc40.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc40.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1689724800 Wrote: /builddir/build/SRPMS/R-rtracklayer-1.56.1-4.fc40.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1695238590.784434/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1695238590.784434/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1695238590.784434/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-xie_vt2u/R-rtracklayer/R-rtracklayer.spec) Config(child) 0 minutes 39 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-rtracklayer-1.56.1-4.fc40.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1695238590.784434/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1695238590.784434/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1695238590.784434/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Finish: chroot init INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc40.x86_64 rpm-sequoia-1.5.0-1.fc40.x86_64 python3-dnf-4.16.2-4.fc40.noarch python3-dnf-plugins-core-4.4.2-1.fc39.noarch yum-4.16.2-4.fc40.noarch Start: build phase for R-rtracklayer-1.56.1-4.fc40.src.rpm Start: build setup for R-rtracklayer-1.56.1-4.fc40.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1689724800 Wrote: /builddir/build/SRPMS/R-rtracklayer-1.56.1-4.fc40.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 49 kB/s | 1.5 kB 00:00 Copr repository 18 kB/s | 58 kB 00:03 fedora 144 kB/s | 19 kB 00:00 Dependencies resolved. ============================================================================================== Package Arch Version Repo Size ============================================================================================== Installing: R-BiocGenerics noarch 0.42.0-4.fc39 fedora 684 k R-BiocIO noarch 1.6.0-4.fc39 fedora 419 k R-Biostrings-devel x86_64 2.64.1-4.fc39 fedora 13 k R-GenomeInfoDb noarch 1.32.3-4.fc39 fedora 3.9 M R-GenomicAlignments x86_64 1.32.1-4.fc39 fedora 2.2 M R-GenomicRanges x86_64 1.48.0-4.fc39 fedora 2.1 M R-IRanges-devel x86_64 2.30.1-4.fc39 fedora 10 k R-RCurl x86_64 1.98.1.8-4.fc39 fedora 908 k R-Rsamtools x86_64 2.12.0-4.fc39 fedora 3.7 M R-S4Vectors-devel x86_64 0.34.0-4.fc39 fedora 13 k R-XML x86_64 3.99.0.10-4.fc39 fedora 2.0 M R-XVector-devel x86_64 0.36.0-4.fc39 fedora 10 k R-core x86_64 4.3.1-3.fc39 fedora 64 M R-devel x86_64 4.3.1-3.fc39 fedora 10 k R-restfulr x86_64 0.0.15-4.fc39 fedora 424 k openssl-devel x86_64 1:3.1.1-4.fc40 fedora 2.6 M zlib-devel x86_64 1.2.13-4.fc39 fedora 45 k Installing dependencies: R-Biobase x86_64 2.56.0-4.fc39 fedora 2.2 M R-BiocParallel x86_64 1.30.3-4.fc39 fedora 1.6 M R-Biostrings x86_64 2.64.1-4.fc39 fedora 14 M R-DelayedArray x86_64 0.22.0-7.fc39 fedora 2.3 M R-GenomeInfoDbData noarch 1.2.8-4.fc39 fedora 11 M R-IRanges x86_64 2.30.1-4.fc39 fedora 2.6 M R-MatrixGenerics noarch 1.8.1-4.fc39 fedora 400 k R-S4Vectors x86_64 0.34.0-4.fc39 fedora 2.3 M R-SummarizedExperiment noarch 1.26.1-4.fc39 fedora 2.3 M R-XVector x86_64 0.36.0-4.fc39 fedora 697 k R-bitops x86_64 1.0.7-9.fc39 fedora 48 k R-core-devel x86_64 4.3.1-3.fc39 fedora 94 k R-crayon noarch 1.5.1-4.fc39 fedora 198 k R-formatR noarch 1.13-5.fc39 fedora 168 k R-futile.logger noarch 1.4.3-20.fc39 fedora 124 k R-futile.options noarch 1.0.1-13.fc39 fedora 38 k R-java x86_64 4.3.1-3.fc39 fedora 11 k R-java-devel x86_64 4.3.1-3.fc39 fedora 10 k R-lambda.r noarch 1.2.4-13.fc39 fedora 138 k R-matrixStats x86_64 0.62.0-4.fc39 fedora 511 k R-rjson x86_64 0.2.21-4.fc39 fedora 165 k R-rpm-macros noarch 1.2.1-7.fc39 fedora 11 k R-snow noarch 0.4.4-13.fc39 fedora 141 k R-yaml x86_64 2.3.5-4.fc39 fedora 127 k abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k adobe-mappings-cmap noarch 20230622-1.fc39 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20230622-1.fc39 fedora 113 k adobe-mappings-pdf noarch 20190401-5.fc39 fedora 698 k alsa-lib x86_64 1.2.10-3.fc40 fedora 522 k annobin-docs noarch 12.26-1.fc40 fedora 94 k annobin-plugin-gcc x86_64 12.26-1.fc40 fedora 958 k avahi-libs x86_64 0.8-24.fc39 fedora 67 k biber noarch 2.19-3.fc39 fedora 292 k brotli x86_64 1.1.0-1.fc40 fedora 20 k brotli-devel x86_64 1.1.0-1.fc40 fedora 34 k bzip2-devel x86_64 1.0.8-16.fc39 fedora 214 k cairo x86_64 1.17.8-5.fc39 fedora 705 k cmake-filesystem x86_64 3.27.4-8.fc40 fedora 19 k copy-jdk-configs noarch 4.1-3.fc39 fedora 28 k cpp x86_64 13.2.1-3.fc40 fedora 11 M crypto-policies-scripts noarch 20230731-1.git5ed06e0.fc39 fedora 115 k cups-libs x86_64 1:2.4.6-6.fc40 fedora 268 k dbus-libs x86_64 1:1.14.10-1.fc40 fedora 155 k default-fonts-core-sans noarch 4.0-9.fc40 fedora 32 k desktop-file-utils x86_64 0.26-9.fc39 fedora 72 k emacs-filesystem noarch 1:29.1-1.fc39 fedora 8.4 k expat x86_64 2.5.0-3.fc39 fedora 110 k flexiblas x86_64 3.3.1-5.fc39 fedora 33 k flexiblas-devel x86_64 3.3.1-5.fc39 fedora 117 k flexiblas-netlib x86_64 3.3.1-5.fc39 fedora 3.1 M flexiblas-netlib64 x86_64 3.3.1-5.fc39 fedora 3.0 M flexiblas-openblas-openmp x86_64 3.3.1-5.fc39 fedora 17 k flexiblas-openblas-openmp64 x86_64 3.3.1-5.fc39 fedora 17 k fontconfig x86_64 2.14.2-5.fc40 fedora 297 k fontconfig-devel x86_64 2.14.2-5.fc40 fedora 165 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freetype x86_64 2.13.1-2.fc39 fedora 414 k freetype-devel x86_64 2.13.1-2.fc39 fedora 950 k fribidi x86_64 1.0.13-2.fc39 fedora 91 k gc x86_64 8.2.2-4.fc39 fedora 110 k gcc x86_64 13.2.1-3.fc40 fedora 34 M gcc-c++ x86_64 13.2.1-3.fc40 fedora 13 M gcc-gfortran x86_64 13.2.1-3.fc40 fedora 12 M gcc-plugin-annobin x86_64 13.2.1-3.fc40 fedora 48 k gettext x86_64 0.22-2.fc39 fedora 1.1 M gettext-envsubst x86_64 0.22-2.fc39 fedora 36 k gettext-libs x86_64 0.22-2.fc39 fedora 328 k gettext-runtime x86_64 0.22-2.fc39 fedora 120 k ghostscript x86_64 10.01.2-3.fc39 fedora 37 k ghostscript-tools-fonts x86_64 10.01.2-3.fc39 fedora 12 k ghostscript-tools-printing x86_64 10.01.2-3.fc39 fedora 13 k glib2 x86_64 2.78.0-2.fc40 fedora 2.8 M glib2-devel x86_64 2.78.0-2.fc40 fedora 596 k glibc-devel x86_64 2.38.9000-9.fc40 fedora 89 k glibc-headers-x86 noarch 2.38.9000-9.fc40 fedora 573 k gnutls x86_64 3.8.1-1.fc40 fedora 1.1 M google-droid-sans-fonts noarch 20200215-17.fc40 fedora 2.7 M google-noto-fonts-common noarch 20230801-3.fc40 fedora 17 k google-noto-sans-vf-fonts noarch 20230801-3.fc40 fedora 583 k graphite2 x86_64 1.3.14-12.fc39 fedora 95 k graphite2-devel x86_64 1.3.14-12.fc39 fedora 20 k groff-base x86_64 1.23.0-2.fc39 fedora 1.1 M 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11:svn15878.1.4-69.fc39 fedora 116 k texlive-algorithms noarch 11:svn42428-69.fc39 fedora 23 k texlive-alphalph noarch 11:svn53087-69.fc39 fedora 361 k texlive-amscls noarch 11:svn55378-69.fc39 fedora 1.1 M texlive-amsfonts noarch 11:svn61937-69.fc39 fedora 3.7 M texlive-amsmath noarch 11:svn63514-69.fc39 fedora 46 k texlive-anysize noarch 11:svn15878.0-69.fc39 fedora 12 k texlive-atbegshi noarch 11:svn53051-69.fc39 fedora 409 k texlive-attachfile noarch 11:svn42099-69.fc39 fedora 22 k texlive-attachfile2 noarch 11:svn57959-77.fc39 fedora 447 k texlive-atveryend noarch 11:svn53108-69.fc39 fedora 385 k texlive-auto-pst-pdf noarch 11:svn56596-69.fc39 fedora 17 k texlive-auxhook noarch 11:svn53173-69.fc39 fedora 295 k texlive-avantgar noarch 11:svn61983-69.fc39 fedora 322 k texlive-babel noarch 11:svn65823-69.fc39 fedora 480 k texlive-babel-english noarch 11:svn44495-69.fc39 fedora 21 k texlive-babelbib noarch 11:svn57349-69.fc39 fedora 54 k texlive-base x86_64 11:20230311-77.fc39 fedora 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texlive-fancyhdr noarch 11:svn64977-69.fc39 fedora 20 k texlive-fancyref noarch 11:svn15878.0.9c-69.fc39 fedora 19 k texlive-fancyvrb noarch 11:svn65585-69.fc39 fedora 26 k texlive-filecontents noarch 11:svn52142-69.fc39 fedora 16 k texlive-filehook noarch 11:svn64822-69.fc39 fedora 23 k texlive-finstrut noarch 11:svn21719.0.5-69.fc39 fedora 20 k texlive-firstaid noarch 11:svn64892-69.fc39 fedora 275 k texlive-fix2col noarch 11:svn38770-69.fc39 fedora 16 k texlive-float noarch 11:svn15878.1.3d-69.fc39 fedora 17 k texlive-fontspec noarch 11:svn63386-69.fc39 fedora 45 k texlive-footmisc noarch 11:svn62524-69.fc39 fedora 25 k texlive-footnotehyper noarch 11:svn60374-69.fc39 fedora 20 k texlive-fp noarch 11:svn49719-69.fc39 fedora 36 k texlive-fpl noarch 11:svn54512-69.fc39 fedora 302 k texlive-geometry noarch 11:svn61719-69.fc39 fedora 23 k texlive-gettitlestring noarch 11:svn53170-69.fc39 fedora 327 k texlive-glyphlist noarch 11:svn54074-77.fc39 fedora 38 k texlive-graphics noarch 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texlive-iftex noarch 11:svn61910-69.fc39 fedora 21 k texlive-index noarch 11:svn24099.4.1beta-69.fc39 fedora 23 k texlive-infwarerr noarch 11:svn53023-69.fc39 fedora 295 k texlive-intcalc noarch 11:svn53168-69.fc39 fedora 432 k texlive-jknapltx noarch 11:svn19440.0-69.fc39 fedora 27 k texlive-kastrup noarch 11:svn15878.0-69.fc39 fedora 13 k texlive-knuth-lib noarch 11:svn57963-69.fc39 fedora 52 k texlive-knuth-local noarch 11:svn57963-69.fc39 fedora 45 k texlive-koma-script noarch 11:svn64685-69.fc39 fedora 6.4 M texlive-kpathsea x86_64 11:svn66209-77.fc39 fedora 1.1 M texlive-kvdefinekeys noarch 11:svn53193-69.fc39 fedora 306 k texlive-kvoptions noarch 11:svn63622-69.fc39 fedora 494 k texlive-kvsetkeys noarch 11:svn64632-69.fc39 fedora 398 k texlive-l3backend noarch 11:svn65573-69.fc39 fedora 897 k texlive-l3experimental noarch 11:svn65621-69.fc39 fedora 43 k texlive-l3kernel noarch 11:svn66094-69.fc39 fedora 202 k texlive-l3packages noarch 11:svn65722-69.fc39 fedora 41 k texlive-latex noarch 11:svn65161-77.fc39 fedora 30 M texlive-latex-fonts noarch 11:svn28888.0-69.fc39 fedora 50 k texlive-latex-lab noarch 11:svn64892-69.fc39 fedora 1.8 M texlive-latexbug noarch 11:svn63596-69.fc39 fedora 238 k texlive-latexconfig noarch 11:svn53525-69.fc39 fedora 15 k texlive-letltxmacro noarch 11:svn53022-69.fc39 fedora 300 k texlive-lib x86_64 11:20230311-77.fc39 fedora 492 k texlive-lineno noarch 11:svn65586-69.fc39 fedora 76 k texlive-listings noarch 11:svn66222-69.fc39 fedora 167 k texlive-lm noarch 11:svn65956-69.fc39 fedora 12 M texlive-lm-math noarch 11:svn36915.1.959-69.fc39 fedora 447 k texlive-logreq noarch 11:svn53003-69.fc39 fedora 20 k texlive-ltabptch noarch 11:svn17533.1.74d-69.fc39 fedora 18 k texlive-ltxcmds noarch 11:svn56421-69.fc39 fedora 400 k texlive-ltxmisc noarch 11:svn21927.0-69.fc39 fedora 28 k texlive-lua-alt-getopt noarch 11:svn56414-69.fc39 fedora 13 k texlive-lua-uni-algos noarch 11:svn62204-69.fc39 fedora 97 k texlive-luabidi noarch 11:svn54512-69.fc39 fedora 20 k texlive-luahbtex x86_64 11:svn66186-77.fc39 fedora 2.0 M texlive-lualatex-math noarch 11:svn61464-69.fc39 fedora 20 k texlive-lualibs noarch 11:svn64615-69.fc39 fedora 160 k texlive-luaotfload noarch 11:svn64616-77.fc39 fedora 1.2 M texlive-luatex x86_64 11:svn66967-77.fc39 fedora 3.9 M texlive-luatexbase noarch 11:svn52663-69.fc39 fedora 16 k texlive-lwarp noarch 11:svn66259-77.fc39 fedora 3.5 M texlive-makecmds noarch 11:svn15878.0-69.fc39 fedora 15 k texlive-makeindex x86_64 11:svn62517-77.fc39 fedora 436 k texlive-marginnote noarch 11:svn48383-69.fc39 fedora 17 k texlive-marvosym noarch 11:svn29349.2.2a-69.fc39 fedora 146 k texlive-mathpazo noarch 11:svn52663-69.fc39 fedora 90 k texlive-mathspec noarch 11:svn42773-69.fc39 fedora 24 k texlive-mathtools noarch 11:svn63767-69.fc39 fedora 38 k texlive-mdwtools noarch 11:svn15878.1.05.4-69.fc39 fedora 36 k texlive-memoir noarch 11:svn65040-69.fc39 fedora 94 k texlive-metafont x86_64 11:svn66186-77.fc39 fedora 268 k texlive-metalogo noarch 11:svn18611.0.12-69.fc39 fedora 16 k texlive-mflogo noarch 11:svn42428-69.fc39 fedora 16 k texlive-mfnfss noarch 11:svn46036-69.fc39 fedora 17 k texlive-mfware x86_64 11:svn66186-77.fc39 fedora 101 k texlive-microtype noarch 11:svn66587-69.fc39 fedora 83 k texlive-minitoc noarch 11:svn61719-69.fc39 fedora 122 k texlive-mnsymbol noarch 11:svn18651.1.4-69.fc39 fedora 4.4 M texlive-modes noarch 11:svn61719-69.fc39 fedora 306 k texlive-mparhack noarch 11:svn59066-69.fc39 fedora 18 k texlive-mptopdf noarch 11:svn65952-77.fc39 fedora 52 k texlive-ms noarch 11:svn57473-69.fc39 fedora 17 k texlive-multido noarch 11:svn18302.1.42-69.fc39 fedora 18 k texlive-natbib noarch 11:svn20668.8.31b-69.fc39 fedora 31 k texlive-newfloat noarch 11:svn52906-69.fc39 fedora 120 k texlive-notoccite noarch 11:svn18129.0-69.fc39 fedora 13 k texlive-ntgclass noarch 11:svn65522-69.fc39 fedora 34 k texlive-oberdiek noarch 11:svn65521-77.fc39 fedora 7.7 M texlive-pagesel noarch 11:svn56105-69.fc39 fedora 340 k texlive-palatino noarch 11:svn61719-69.fc39 fedora 423 k texlive-paralist noarch 11:svn43021-69.fc39 fedora 18 k texlive-parallel noarch 11:svn15878.0-69.fc39 fedora 18 k texlive-parskip noarch 11:svn58358-69.fc39 fedora 17 k texlive-pdfcol noarch 11:svn64469-69.fc39 fedora 327 k texlive-pdfcolfoot noarch 11:svn65512-69.fc39 fedora 319 k texlive-pdfcolmk noarch 11:svn52912-69.fc39 fedora 18 k texlive-pdfescape noarch 11:svn53082-69.fc39 fedora 353 k texlive-pdflscape noarch 11:svn64851-69.fc39 fedora 324 k texlive-pdfmanagement-testphase noarch 11:svn66532-69.fc39 fedora 8.3 M texlive-pdfpages noarch 11:svn65319-69.fc39 fedora 32 k texlive-pdftex x86_64 11:svn66243-77.fc39 fedora 2.5 M texlive-pdftexcmds noarch 11:svn55777-69.fc39 fedora 391 k texlive-pgf noarch 11:svn65553-69.fc39 fedora 897 k texlive-picture noarch 11:svn54867-69.fc39 fedora 312 k texlive-placeins noarch 11:svn19848.2.2-69.fc39 fedora 13 k texlive-plain noarch 11:svn57963-69.fc39 fedora 48 k texlive-polyglossia noarch 11:svn65792-69.fc39 fedora 220 k texlive-psfrag noarch 11:svn15878.3.04-69.fc39 fedora 15 k texlive-pslatex noarch 11:svn57434-69.fc39 fedora 22 k texlive-psnfss noarch 11:svn54694-69.fc39 fedora 60 k texlive-pspicture noarch 11:svn15878.0-69.fc39 fedora 16 k texlive-pst-3d noarch 11:svn17257.1.10-69.fc39 fedora 18 k texlive-pst-coil noarch 11:svn62977-69.fc39 fedora 18 k texlive-pst-eps noarch 11:svn15878.1.0-69.fc39 fedora 17 k texlive-pst-fill noarch 11:svn60671-69.fc39 fedora 18 k texlive-pst-grad noarch 11:svn15878.1.06-69.fc39 fedora 18 k texlive-pst-math noarch 11:svn64732-69.fc39 fedora 20 k texlive-pst-node noarch 11:svn61838-69.fc39 fedora 40 k texlive-pst-ovl noarch 11:svn54963-69.fc39 fedora 16 k texlive-pst-plot noarch 11:svn65346-69.fc39 fedora 37 k texlive-pst-text noarch 11:svn49542-69.fc39 fedora 19 k texlive-pst-tools noarch 11:svn60621-69.fc39 fedora 21 k texlive-pst-tree noarch 11:svn60421-69.fc39 fedora 21 k texlive-pstricks noarch 11:svn65346-69.fc39 fedora 117 k texlive-pstricks-add noarch 11:svn65067-69.fc39 fedora 37 k texlive-ragged2e noarch 11:svn66152-69.fc39 fedora 682 k texlive-rcs noarch 11:svn15878.0-69.fc39 fedora 28 k texlive-realscripts noarch 11:svn56594-69.fc39 fedora 19 k texlive-refcount noarch 11:svn53164-69.fc39 fedora 335 k texlive-rerunfilecheck noarch 11:svn63869-69.fc39 fedora 341 k texlive-rsfs noarch 11:svn15878.0-69.fc39 fedora 73 k texlive-sansmath noarch 11:svn17997.1.1-69.fc39 fedora 14 k texlive-sansmathaccent noarch 11:svn53628-69.fc39 fedora 36 k texlive-sauerj noarch 11:svn15878.0-69.fc39 fedora 20 k texlive-section noarch 11:svn20180.0-69.fc39 fedora 24 k texlive-seminar noarch 11:svn59801-69.fc39 fedora 52 k texlive-sepnum noarch 11:svn20186.2.0-69.fc39 fedora 17 k texlive-setspace noarch 11:svn65206-69.fc39 fedora 18 k texlive-showexpl noarch 11:svn57414-69.fc39 fedora 18 k texlive-stringenc noarch 11:svn52982-69.fc39 fedora 702 k texlive-subfig noarch 11:svn15878.1.3-69.fc39 fedora 21 k texlive-symbol noarch 11:svn61719-69.fc39 fedora 54 k texlive-tex x86_64 11:svn66186-77.fc39 fedora 212 k texlive-tex-ini-files noarch 11:svn40533-69.fc39 fedora 15 k texlive-texlive-common-doc noarch 11:svn54176-69.fc39 fedora 158 k texlive-texlive-en noarch 11:svn66572-77.fc39 fedora 2.0 M texlive-texlive-msg-translations noarch 11:svn66593-69.fc39 fedora 165 k texlive-texlive-scripts noarch 11:svn66584-77.fc39 fedora 122 k texlive-texlive.infra noarch 11:svn66512-77.fc39 fedora 295 k texlive-textcase noarch 11:svn63868-69.fc39 fedora 16 k texlive-thumbpdf noarch 11:svn62518-77.fc39 fedora 41 k texlive-times noarch 11:svn61719-69.fc39 fedora 368 k texlive-tipa noarch 11:svn29349.1.3-69.fc39 fedora 2.8 M texlive-titlesec noarch 11:svn59845-69.fc39 fedora 34 k texlive-tools noarch 11:svn64892-69.fc39 fedora 75 k texlive-translator noarch 11:svn59412-69.fc39 fedora 296 k texlive-transparent noarch 11:svn64852-69.fc39 fedora 286 k texlive-typehtml noarch 11:svn17134.0-69.fc39 fedora 21 k texlive-ucharcat noarch 11:svn38907-69.fc39 fedora 15 k texlive-ucs noarch 11:svn64114-69.fc39 fedora 423 k texlive-underscore noarch 11:svn18261.0-69.fc39 fedora 19 k texlive-unicode-data noarch 11:svn64423-69.fc39 fedora 371 k texlive-unicode-math noarch 11:svn61719-69.fc39 fedora 63 k texlive-uniquecounter noarch 11:svn53162-69.fc39 fedora 300 k texlive-url noarch 11:svn32528.3.4-69.fc39 fedora 20 k texlive-utopia noarch 11:svn15878.0-69.fc39 fedora 239 k texlive-varwidth noarch 11:svn24104.0.92-69.fc39 fedora 18 k texlive-xcolor noarch 11:svn63563-69.fc39 fedora 32 k texlive-xdvi x86_64 11:svn62387-77.fc39 fedora 351 k texlive-xetex x86_64 11:svn66203-77.fc39 fedora 1.3 M texlive-xetexconfig noarch 11:svn45845-69.fc39 fedora 11 k texlive-xifthen noarch 11:svn38929-69.fc39 fedora 16 k texlive-xkeyval noarch 11:svn63616-69.fc39 fedora 27 k texlive-xltxtra noarch 11:svn56594-69.fc39 fedora 17 k texlive-xpatch noarch 11:svn54563-69.fc39 fedora 19 k texlive-xstring noarch 11:svn65551-69.fc39 fedora 25 k texlive-xunicode noarch 11:svn30466.0.981-69.fc39 fedora 44 k texlive-zapfding noarch 11:svn61719-69.fc39 fedora 64 k texlive-zref noarch 11:svn62977-69.fc39 fedora 688 k tk x86_64 1:8.6.13-1.fc40 fedora 1.6 M tk-devel x86_64 1:8.6.13-1.fc40 fedora 541 k tre x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 43 k tre-common noarch 0.8.0-41.20140228gitc2f5d13.fc39 fedora 31 k tre-devel x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 12 k ttmkfdir x86_64 3.0.9-69.fc39 fedora 56 k tzdata noarch 2023c-3.fc40 fedora 718 k tzdata-java noarch 2023c-3.fc40 fedora 48 k urw-base35-bookman-fonts noarch 20200910-18.fc39 fedora 847 k urw-base35-c059-fonts noarch 20200910-18.fc39 fedora 874 k urw-base35-d050000l-fonts noarch 20200910-18.fc39 fedora 76 k urw-base35-fonts noarch 20200910-18.fc39 fedora 10 k urw-base35-fonts-common noarch 20200910-18.fc39 fedora 21 k urw-base35-gothic-fonts noarch 20200910-18.fc39 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-18.fc39 fedora 795 k urw-base35-nimbus-roman-fonts noarch 20200910-18.fc39 fedora 856 k urw-base35-nimbus-sans-fonts noarch 20200910-18.fc39 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-18.fc39 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-18.fc39 fedora 42 k urw-base35-z003-fonts noarch 20200910-18.fc39 fedora 276 k xdg-utils noarch 1.1.3-15.fc40 fedora 77 k xml-common noarch 0.6.3-61.fc39 fedora 31 k xorg-x11-fonts-Type1 noarch 7.5-36.fc39 fedora 504 k xorg-x11-proto-devel noarch 2023.2-3.fc40 fedora 298 k xpdf-libs x86_64 1:4.04-10.fc39 fedora 647 k xz-devel x86_64 5.4.4-1.fc39 fedora 66 k zziplib x86_64 0.13.72-5.fc39 fedora 86 k Transaction Summary ============================================================================================== Install 716 Packages Total size: 566 M Total download size: 499 M Installed size: 1.4 G Downloading Packages: [SKIPPED] annobin-docs-12.26-1.fc40.noarch.rpm: Already downloaded [SKIPPED] annobin-plugin-gcc-12.26-1.fc40.x86_64.rpm: Already downloaded [SKIPPED] cpp-13.2.1-3.fc40.x86_64.rpm: Already downloaded [SKIPPED] emacs-filesystem-29.1-1.fc39.noarch.rpm: Already downloaded [SKIPPED] gc-8.2.2-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] gcc-13.2.1-3.fc40.x86_64.rpm: Already downloaded [SKIPPED] gcc-plugin-annobin-13.2.1-3.fc40.x86_64.rpm: Already downloaded [SKIPPED] glibc-devel-2.38.9000-9.fc40.x86_64.rpm: Already downloaded [SKIPPED] glibc-headers-x86-2.38.9000-9.fc40.noarch.rpm: Already downloaded [SKIPPED] groff-base-1.23.0-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] guile22-2.2.7-9.fc39.x86_64.rpm: Already downloaded [SKIPPED] kernel-headers-6.6.0-0.rc2.git0.1.fc40.x86_64.rpm: Already downloaded [SKIPPED] libmpc-1.3.1-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] libtool-ltdl-2.4.7-8.fc40.x86_64.rpm: Already downloaded [SKIPPED] libxcrypt-devel-4.4.36-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] make-4.4.1-2.fc39.x86_64.rpm: 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perl-Symbol-1.09-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-Term-ANSIColor-5.01-501.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-Term-Cap-1.18-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-Text-ParseWords-3.31-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-Time-Local-1.350-3.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-URI-5.21-1.fc40.noarch.rpm: Already downloaded [SKIPPED] perl-base-2.27-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-constant-1.33-501.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-if-0.61.000-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-interpreter-5.38.0-500.fc39.x86_64.rpm: Already downloaded [SKIPPED] perl-libnet-3.15-501.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-libs-5.38.0-500.fc39.x86_64.rpm: Already downloaded [SKIPPED] perl-locale-1.10-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-mro-1.28-500.fc39.x86_64.rpm: Already downloaded [SKIPPED] perl-overload-1.37-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-overloading-0.02-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-parent-0.241-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-podlators-5.01-500.fc39.noarch.rpm: Already downloaded [SKIPPED] perl-vars-1.05-500.fc39.noarch.rpm: Already downloaded (79/716): R-BiocIO-1.6.0-4.fc39.noarch.rpm 662 kB/s | 419 kB 00:00 (80/716): R-BiocGenerics-0.42.0-4.fc39.noarch.r 901 kB/s | 684 kB 00:00 (81/716): R-BiocParallel-1.30.3-4.fc39.x86_64.r 5.2 MB/s | 1.6 MB 00:00 (82/716): R-Biostrings-devel-2.64.1-4.fc39.x86_ 173 kB/s | 13 kB 00:00 (83/716): R-DelayedArray-0.22.0-7.fc39.x86_64.r 9.4 MB/s | 2.3 MB 00:00 (84/716): R-GenomeInfoDb-1.32.3-4.fc39.noarch.r 12 MB/s | 3.9 MB 00:00 (85/716): R-Biostrings-2.64.1-4.fc39.x86_64.rpm 16 MB/s | 14 MB 00:00 (86/716): R-GenomicAlignments-1.32.1-4.fc39.x86 11 MB/s | 2.2 MB 00:00 (87/716): 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glibc-headers-x86-2.38.9000-9.fc40.noarch 90/716 Verifying : gnutls-3.8.1-1.fc40.x86_64 91/716 Verifying : google-droid-sans-fonts-20200215-17.fc40.noarch 92/716 Verifying : google-noto-fonts-common-20230801-3.fc40.noarch 93/716 Verifying : google-noto-sans-vf-fonts-20230801-3.fc40.noarch 94/716 Verifying : graphite2-1.3.14-12.fc39.x86_64 95/716 Verifying : graphite2-devel-1.3.14-12.fc39.x86_64 96/716 Verifying : groff-base-1.23.0-2.fc39.x86_64 97/716 Verifying : guile22-2.2.7-9.fc39.x86_64 98/716 Verifying : harfbuzz-8.2.1-1.fc40.x86_64 99/716 Verifying : harfbuzz-devel-8.2.1-1.fc40.x86_64 100/716 Verifying : harfbuzz-icu-8.2.1-1.fc40.x86_64 101/716 Verifying : java-17-openjdk-1:17.0.8.0.7-1.fc39.x86_64 102/716 Verifying : java-17-openjdk-devel-1:17.0.8.0.7-1.fc39.x86_64 103/716 Verifying : java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.x86 104/716 Verifying : javapackages-filesystem-6.2.0-3.fc40.noarch 105/716 Verifying : jbig2dec-libs-0.19-10.fc39.x86_64 106/716 Verifying : jbigkit-libs-2.1-26.fc39.x86_64 107/716 Verifying : kernel-headers-6.6.0-0.rc2.git0.1.fc40.x86_64 108/716 Verifying : lcms2-2.15-2.fc39.x86_64 109/716 Verifying : libICE-1.0.10-12.fc40.x86_64 110/716 Verifying : libRmath-4.3.1-3.fc39.x86_64 111/716 Verifying : libRmath-devel-4.3.1-3.fc39.x86_64 112/716 Verifying : libSM-1.2.3-14.fc40.x86_64 113/716 Verifying : libX11-1.8.6-3.fc40.x86_64 114/716 Verifying : libX11-common-1.8.6-3.fc40.noarch 115/716 Verifying : libX11-devel-1.8.6-3.fc40.x86_64 116/716 Verifying : libX11-xcb-1.8.6-3.fc40.x86_64 117/716 Verifying : libXau-1.0.11-4.fc40.x86_64 118/716 Verifying : libXau-devel-1.0.11-4.fc40.x86_64 119/716 Verifying : libXaw-1.0.14-6.fc40.x86_64 120/716 Verifying : libXcomposite-0.4.5-11.fc40.x86_64 121/716 Verifying : libXext-1.3.5-3.fc39.x86_64 122/716 Verifying : libXft-2.3.8-4.fc40.x86_64 123/716 Verifying : libXft-devel-2.3.8-4.fc40.x86_64 124/716 Verifying : libXi-1.8.1-3.fc40.x86_64 125/716 Verifying : libXmu-1.1.4-4.fc40.x86_64 126/716 Verifying : libXpm-3.5.15-5.fc40.x86_64 127/716 Verifying : libXrender-0.9.11-4.fc40.x86_64 128/716 Verifying : libXrender-devel-0.9.11-4.fc40.x86_64 129/716 Verifying : libXt-1.2.1-6.fc40.x86_64 130/716 Verifying : libXtst-1.2.4-3.fc39.x86_64 131/716 Verifying : libb2-0.98.1-9.fc39.x86_64 132/716 Verifying : libblkid-devel-2.39.2-1.fc40.x86_64 133/716 Verifying : libdatrie-0.2.13-7.fc39.x86_64 134/716 Verifying : libffi-devel-3.4.4-4.fc39.x86_64 135/716 Verifying : libfontenc-1.1.6-3.fc39.x86_64 136/716 Verifying : libgfortran-13.2.1-3.fc40.x86_64 137/716 Verifying : libgs-10.01.2-3.fc39.x86_64 138/716 Verifying : libicu-73.2-2.fc39.x86_64 139/716 Verifying : libicu-devel-73.2-2.fc39.x86_64 140/716 Verifying : libijs-0.35-19.fc39.x86_64 141/716 Verifying : libjpeg-turbo-2.1.4-3.fc39.x86_64 142/716 Verifying : liblerc-4.0.0-4.fc39.x86_64 143/716 Verifying : libmount-devel-2.39.2-1.fc40.x86_64 144/716 Verifying : libmpc-1.3.1-3.fc39.x86_64 145/716 Verifying : libpaper-1:2.1.1-1.fc39.x86_64 146/716 Verifying : libpng-2:1.6.37-15.fc39.x86_64 147/716 Verifying : libpng-devel-2:1.6.37-15.fc39.x86_64 148/716 Verifying : libquadmath-13.2.1-3.fc40.x86_64 149/716 Verifying : libquadmath-devel-13.2.1-3.fc40.x86_64 150/716 Verifying : libselinux-devel-3.5-5.fc39.x86_64 151/716 Verifying : libsepol-devel-3.5-2.fc39.x86_64 152/716 Verifying : libstdc++-devel-13.2.1-3.fc40.x86_64 153/716 Verifying : libthai-0.1.29-6.fc39.x86_64 154/716 Verifying : libtiff-4.4.0-8.fc40.x86_64 155/716 Verifying : libtirpc-devel-1.3.3-1.rc2.fc39.x86_64 156/716 Verifying : libtool-ltdl-2.4.7-8.fc40.x86_64 157/716 Verifying : libwebp-1.3.2-1.fc40.x86_64 158/716 Verifying : libxcb-1.13.1-12.fc39.x86_64 159/716 Verifying : libxcb-devel-1.13.1-12.fc39.x86_64 160/716 Verifying : libxcrypt-devel-4.4.36-2.fc39.x86_64 161/716 Verifying : libxml2-devel-2.11.5-1.fc40.x86_64 162/716 Verifying : libxslt-1.1.38-3.fc39.x86_64 163/716 Verifying : lksctp-tools-1.0.19-4.fc39.x86_64 164/716 Verifying : lua-5.4.6-3.fc39.x86_64 165/716 Verifying : lua-posix-36.2.1-3.fc39.x86_64 166/716 Verifying : mailcap-2.1.54-2.fc39.noarch 167/716 Verifying : make-1:4.4.1-2.fc39.x86_64 168/716 Verifying : mkfontscale-1.2.2-4.fc39.x86_64 169/716 Verifying : mpdecimal-2.5.1-7.fc39.x86_64 170/716 Verifying : ncurses-6.4-7.20230520.fc40.x86_64 171/716 Verifying : nettle-3.9.1-2.fc39.x86_64 172/716 Verifying : nspr-4.35.0-13.fc40.x86_64 173/716 Verifying : nss-3.93.0-2.fc40.x86_64 174/716 Verifying : nss-softokn-3.93.0-2.fc40.x86_64 175/716 Verifying : nss-softokn-freebl-3.93.0-2.fc40.x86_64 176/716 Verifying : nss-sysinit-3.93.0-2.fc40.x86_64 177/716 Verifying : nss-util-3.93.0-2.fc40.x86_64 178/716 Verifying : openblas-0.3.21-6.fc39.x86_64 179/716 Verifying : openblas-openmp-0.3.21-6.fc39.x86_64 180/716 Verifying : openblas-openmp64-0.3.21-6.fc39.x86_64 181/716 Verifying : openjpeg2-2.5.0-4.fc39.x86_64 182/716 Verifying : openssl-devel-1:3.1.1-4.fc40.x86_64 183/716 Verifying : pango-1.51.0-1.fc40.x86_64 184/716 Verifying : pcre2-devel-10.42-1.fc39.2.x86_64 185/716 Verifying : pcre2-utf16-10.42-1.fc39.2.x86_64 186/716 Verifying : pcre2-utf32-10.42-1.fc39.2.x86_64 187/716 Verifying : perl-Authen-SASL-2.1700-1.fc40.noarch 188/716 Verifying : perl-AutoLoader-5.74-500.fc39.noarch 189/716 Verifying : perl-B-1.88-500.fc39.x86_64 190/716 Verifying : perl-B-Hooks-EndOfScope-0.26-7.fc39.noarch 191/716 Verifying : perl-Business-ISBN-3.008-2.fc39.noarch 192/716 Verifying : perl-Business-ISBN-Data-20230907.001-1.fc40.noar 193/716 Verifying : perl-Business-ISMN-1.203-2.fc39.noarch 194/716 Verifying : perl-Business-ISSN-1.005-8.fc39.noarch 195/716 Verifying : perl-Carp-1.54-500.fc39.noarch 196/716 Verifying : perl-Class-Accessor-0.51-18.fc39.noarch 197/716 Verifying : perl-Class-Data-Inheritable-0.09-6.fc39.noarch 198/716 Verifying : perl-Class-Inspector-1.36-14.fc39.noarch 199/716 Verifying : perl-Class-Method-Modifiers-2.15-2.fc39.noarch 200/716 Verifying : perl-Class-Singleton-1.6-9.fc39.noarch 201/716 Verifying : perl-Class-Struct-0.68-500.fc39.noarch 202/716 Verifying : perl-Clone-0.46-4.fc39.x86_64 203/716 Verifying : perl-Compress-Raw-Bzip2-2.206-1.fc39.x86_64 204/716 Verifying : perl-Compress-Raw-Zlib-2.206-1.fc39.x86_64 205/716 Verifying : perl-Convert-ASN1-0.34-1.fc40.noarch 206/716 Verifying : perl-Data-Compare-1.29-2.fc39.noarch 207/716 Verifying : perl-Data-Dump-1.25-8.fc39.noarch 208/716 Verifying : perl-Data-Dumper-2.188-501.fc39.x86_64 209/716 Verifying : perl-Data-OptList-0.114-2.fc39.noarch 210/716 Verifying : perl-Data-Uniqid-0.12-31.fc39.noarch 211/716 Verifying : perl-Date-ISO8601-0.005-18.fc39.noarch 212/716 Verifying : perl-Date-Manip-6.92-2.fc39.noarch 213/716 Verifying : perl-DateTime-2:1.59-5.fc39.x86_64 214/716 Verifying : perl-DateTime-Calendar-Julian-0.107-5.fc39.noarc 215/716 Verifying : perl-DateTime-Format-Builder-0.8300-11.fc39.noar 216/716 Verifying : perl-DateTime-Format-Strptime-1:1.79-8.fc39.noar 217/716 Verifying : perl-DateTime-Locale-1.39-2.fc39.noarch 218/716 Verifying : perl-DateTime-TimeZone-2.60-4.fc39.noarch 219/716 Verifying : perl-DateTime-TimeZone-SystemV-0.010-19.fc39.noa 220/716 Verifying : perl-DateTime-TimeZone-Tzfile-0.011-19.fc39.noar 221/716 Verifying : perl-Devel-CallChecker-0.009-3.fc39.x86_64 222/716 Verifying : perl-Devel-Caller-2.07-3.fc39.x86_64 223/716 Verifying : perl-Devel-GlobalDestruction-0.14-22.fc39.noarch 224/716 Verifying : perl-Devel-LexAlias-0.05-34.fc39.x86_64 225/716 Verifying : perl-Devel-StackTrace-1:2.04-16.fc39.noarch 226/716 Verifying : perl-Digest-1.20-500.fc39.noarch 227/716 Verifying : perl-Digest-HMAC-1.04-8.fc39.noarch 228/716 Verifying : perl-Digest-MD5-2.58-500.fc39.x86_64 229/716 Verifying : perl-Digest-SHA-1:6.04-501.fc39.x86_64 230/716 Verifying : perl-Dist-CheckConflicts-0.11-28.fc39.noarch 231/716 Verifying : perl-DynaLoader-1.54-500.fc39.x86_64 232/716 Verifying : perl-DynaLoader-Functions-0.004-2.fc39.noarch 233/716 Verifying : perl-Email-Date-Format-1.008-2.fc39.noarch 234/716 Verifying : perl-Encode-4:3.19-500.fc39.x86_64 235/716 Verifying : perl-Encode-Locale-1.05-27.fc39.noarch 236/716 Verifying : perl-English-1.11-500.fc39.noarch 237/716 Verifying : perl-Errno-1.37-500.fc39.x86_64 238/716 Verifying : perl-Eval-Closure-0.14-21.fc39.noarch 239/716 Verifying : perl-Exception-Class-1.45-8.fc39.noarch 240/716 Verifying : perl-Exporter-5.77-500.fc39.noarch 241/716 Verifying : perl-ExtUtils-MM-Utils-2:7.70-501.fc39.noarch 242/716 Verifying : perl-Fcntl-1.15-500.fc39.x86_64 243/716 Verifying : perl-File-Basename-2.86-500.fc39.noarch 244/716 Verifying : perl-File-Compare-1.100.700-500.fc39.noarch 245/716 Verifying : perl-File-Copy-2.41-500.fc39.noarch 246/716 Verifying : perl-File-Find-1.43-500.fc39.noarch 247/716 Verifying : perl-File-Find-Rule-0.34-26.fc39.noarch 248/716 Verifying : perl-File-Listing-6.16-1.fc39.noarch 249/716 Verifying : perl-File-Path-2.18-500.fc39.noarch 250/716 Verifying : perl-File-ShareDir-1.118-9.fc39.noarch 251/716 Verifying : perl-File-Slurper-0.014-3.fc39.noarch 252/716 Verifying : perl-File-Temp-1:0.231.100-500.fc39.noarch 253/716 Verifying : perl-File-stat-1.13-500.fc39.noarch 254/716 Verifying : perl-FileHandle-2.05-500.fc39.noarch 255/716 Verifying : perl-Filter-2:1.64-501.fc39.x86_64 256/716 Verifying : perl-GSSAPI-0.28-43.fc39.x86_64 257/716 Verifying : perl-Getopt-Long-1:2.54-500.fc39.noarch 258/716 Verifying : perl-Getopt-Std-1.13-500.fc39.noarch 259/716 Verifying : perl-HTML-Parser-3.81-3.fc39.x86_64 260/716 Verifying : perl-HTML-Tagset-3.20-55.fc40.noarch 261/716 Verifying : perl-HTTP-Cookies-6.10-10.fc39.noarch 262/716 Verifying : perl-HTTP-Date-6.06-2.fc39.noarch 263/716 Verifying : perl-HTTP-Message-6.44-3.fc39.noarch 264/716 Verifying : perl-HTTP-Negotiate-6.01-36.fc39.noarch 265/716 Verifying : perl-HTTP-Tiny-0.088-3.fc39.noarch 266/716 Verifying : perl-Hash-Util-FieldHash-1.26-500.fc39.x86_64 267/716 Verifying : perl-I18N-LangTags-0.45-500.fc39.noarch 268/716 Verifying : perl-I18N-Langinfo-0.22-500.fc39.x86_64 269/716 Verifying : perl-IO-1.52-500.fc39.x86_64 270/716 Verifying : perl-IO-Compress-2.206-1.fc39.noarch 271/716 Verifying : perl-IO-HTML-1.004-11.fc39.noarch 272/716 Verifying : perl-IO-Socket-IP-0.42-1.fc39.noarch 273/716 Verifying : perl-IO-Socket-SSL-2.083-3.fc39.noarch 274/716 Verifying : perl-IO-String-1.08-48.fc39.noarch 275/716 Verifying : perl-IPC-Cmd-2:1.04-501.fc39.noarch 276/716 Verifying : perl-IPC-Open3-1.22-500.fc39.noarch 277/716 Verifying : perl-IPC-Run3-0.048-29.fc39.noarch 278/716 Verifying : perl-IPC-SysV-2.09-501.fc39.x86_64 279/716 Verifying : perl-IPC-System-Simple-1.30-11.fc39.noarch 280/716 Verifying : perl-JSON-4.10-3.fc39.noarch 281/716 Verifying : perl-LDAP-1:0.68-11.fc39.noarch 282/716 Verifying : perl-LWP-MediaTypes-6.04-15.fc39.noarch 283/716 Verifying : perl-LWP-Protocol-https-6.11-1.fc39.noarch 284/716 Verifying : perl-Lingua-Translit-0.29-4.fc39.noarch 285/716 Verifying : perl-List-AllUtils-0.19-10.fc39.noarch 286/716 Verifying : perl-List-SomeUtils-0.59-3.fc39.noarch 287/716 Verifying : perl-List-UtilsBy-0.12-7.fc39.noarch 288/716 Verifying : perl-Locale-Maketext-1.33-501.fc39.noarch 289/716 Verifying : perl-Locale-Maketext-Simple-1:0.21-500.fc39.noar 290/716 Verifying : perl-Log-Dispatch-2.71-2.fc39.noarch 291/716 Verifying : perl-Log-Dispatch-FileRotate-1.38-7.fc39.noarch 292/716 Verifying : perl-Log-Log4perl-1.57-3.fc39.noarch 293/716 Verifying : perl-MIME-Base64-3.16-500.fc39.x86_64 294/716 Verifying : perl-MIME-Charset-1.013.1-3.fc39.noarch 295/716 Verifying : perl-MIME-Lite-3.033-8.fc39.noarch 296/716 Verifying : perl-MIME-Types-2.24-3.fc39.noarch 297/716 Verifying : perl-MRO-Compat-0.15-7.fc39.noarch 298/716 Verifying : perl-Mail-Sender-1:0.903-22.fc39.noarch 299/716 Verifying : perl-Mail-Sendmail-0.80-18.fc39.noarch 300/716 Verifying : perl-MailTools-2.21-14.fc39.noarch 301/716 Verifying : perl-Math-BigInt-1:1.9998.39-2.fc39.noarch 302/716 Verifying : perl-Math-BigRat-0.2624-500.fc39.noarch 303/716 Verifying : perl-Math-Complex-1.62-500.fc39.noarch 304/716 Verifying : perl-Module-CoreList-1:5.20230820-1.fc40.noarch 305/716 Verifying : perl-Module-Implementation-0.09-37.fc39.noarch 306/716 Verifying : perl-Module-Load-1:0.36-500.fc39.noarch 307/716 Verifying : perl-Module-Load-Conditional-0.74-500.fc39.noarc 308/716 Verifying : perl-Module-Metadata-1.000038-3.fc39.noarch 309/716 Verifying : perl-Module-Runtime-0.016-20.fc39.noarch 310/716 Verifying : perl-Mozilla-CA-20230821-1.fc40.noarch 311/716 Verifying : perl-NTLM-1.09-36.fc39.noarch 312/716 Verifying : perl-Net-HTTP-6.23-2.fc39.noarch 313/716 Verifying : perl-Net-SMTP-SSL-1.04-22.fc40.noarch 314/716 Verifying : perl-Net-SSLeay-1.92-10.fc39.x86_64 315/716 Verifying : perl-Number-Compare-0.03-36.fc39.noarch 316/716 Verifying : perl-Opcode-1.64-500.fc39.x86_64 317/716 Verifying : perl-POSIX-2.13-500.fc39.x86_64 318/716 Verifying : perl-Package-Generator-1.106-29.fc39.noarch 319/716 Verifying : perl-Package-Stash-0.40-5.fc39.noarch 320/716 Verifying : perl-Package-Stash-XS-0.30-5.fc39.x86_64 321/716 Verifying : perl-PadWalker-2.5-10.fc39.x86_64 322/716 Verifying : perl-Params-Check-1:0.38-500.fc39.noarch 323/716 Verifying : perl-Params-Classify-0.015-20.fc39.x86_64 324/716 Verifying : perl-Params-Util-1.102-12.fc39.x86_64 325/716 Verifying : perl-Params-Validate-1.31-5.fc39.x86_64 326/716 Verifying : perl-Params-ValidationCompiler-0.31-3.fc39.noarc 327/716 Verifying : perl-Parse-RecDescent-1.967015-20.fc39.noarch 328/716 Verifying : perl-PathTools-3.89-500.fc39.x86_64 329/716 Verifying : perl-Pod-Escapes-1:1.07-501.fc40.noarch 330/716 Verifying : perl-Pod-Html-1.34-500.fc39.noarch 331/716 Verifying : perl-Pod-Perldoc-3.28.01-501.fc39.noarch 332/716 Verifying : perl-Pod-Simple-1:3.45-4.fc39.noarch 333/716 Verifying : perl-Pod-Usage-4:2.03-500.fc39.noarch 334/716 Verifying : perl-Ref-Util-0.204-18.fc39.noarch 335/716 Verifying : perl-Ref-Util-XS-0.117-20.fc39.x86_64 336/716 Verifying : perl-Regexp-Common-2017060201-22.fc39.noarch 337/716 Verifying : perl-Role-Tiny-2.002004-9.fc39.noarch 338/716 Verifying : perl-Safe-2.44-500.fc39.noarch 339/716 Verifying : perl-Scalar-List-Utils-5:1.63-500.fc39.x86_64 340/716 Verifying : perl-SelectSaver-1.02-500.fc39.noarch 341/716 Verifying : perl-Socket-4:2.037-3.fc39.x86_64 342/716 Verifying : perl-Sort-Key-1.33-28.fc39.x86_64 343/716 Verifying : perl-Specio-0.48-4.fc39.noarch 344/716 Verifying : perl-Storable-1:3.32-500.fc39.x86_64 345/716 Verifying : perl-Sub-Exporter-0.990-1.fc39.noarch 346/716 Verifying : perl-Sub-Exporter-Progressive-0.001013-22.fc39.n 347/716 Verifying : perl-Sub-Identify-0.14-24.fc39.x86_64 348/716 Verifying : perl-Sub-Install-0.929-3.fc39.noarch 349/716 Verifying : perl-Symbol-1.09-500.fc39.noarch 350/716 Verifying : perl-Sys-Hostname-1.25-500.fc39.x86_64 351/716 Verifying : perl-Sys-Syslog-0.36-501.fc39.x86_64 352/716 Verifying : perl-Term-ANSIColor-5.01-501.fc39.noarch 353/716 Verifying : perl-Term-Cap-1.18-500.fc39.noarch 354/716 Verifying : perl-Text-Balanced-2.06-500.fc39.noarch 355/716 Verifying : perl-Text-BibTeX-0.89-3.fc39.x86_64 356/716 Verifying : perl-Text-CSV-2.03-1.fc40.noarch 357/716 Verifying : perl-Text-Glob-0.11-21.fc39.noarch 358/716 Verifying : perl-Text-ParseWords-3.31-500.fc39.noarch 359/716 Verifying : perl-Text-Roman-3.5-25.fc39.noarch 360/716 Verifying : perl-Text-Soundex-3.05-28.fc39.x86_64 361/716 Verifying : perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch 362/716 Verifying : perl-Text-Unidecode-1.30-22.fc39.noarch 363/716 Verifying : perl-Tie-4.6-500.fc39.noarch 364/716 Verifying : perl-Tie-Cycle-1.227-9.fc39.noarch 365/716 Verifying : perl-Tie-RefHash-1.40-500.fc39.noarch 366/716 Verifying : perl-Time-HiRes-4:1.9775-500.fc39.x86_64 367/716 Verifying : perl-Time-Local-2:1.350-3.fc39.noarch 368/716 Verifying : perl-TimeDate-1:2.33-11.fc39.noarch 369/716 Verifying : perl-Try-Tiny-0.31-6.fc39.noarch 370/716 Verifying : perl-URI-5.21-1.fc40.noarch 371/716 Verifying : perl-Unicode-Collate-1.31-500.fc39.x86_64 372/716 Verifying : perl-Unicode-LineBreak-2019.001-18.fc39.x86_64 373/716 Verifying : perl-Unicode-Normalize-1.32-500.fc39.x86_64 374/716 Verifying : perl-Unicode-UCD-0.78-500.fc39.noarch 375/716 Verifying : perl-Variable-Magic-0.63-4.fc39.x86_64 376/716 Verifying : perl-WWW-RobotRules-6.02-37.fc39.noarch 377/716 Verifying : perl-XML-LibXML-1:2.0209-2.fc39.x86_64 378/716 Verifying : perl-XML-LibXML-Simple-1.01-12.fc39.noarch 379/716 Verifying : perl-XML-LibXSLT-2.002.001-3.fc39.x86_64 380/716 Verifying : perl-XML-NamespaceSupport-1.12-21.fc40.noarch 381/716 Verifying : perl-XML-Parser-2.46-15.fc39.x86_64 382/716 Verifying : perl-XML-SAX-1.02-13.fc39.noarch 383/716 Verifying : perl-XML-SAX-Base-1.09-21.fc40.noarch 384/716 Verifying : perl-XML-Writer-0.900-12.fc39.noarch 385/716 Verifying : perl-XML-XPath-1.48-4.fc39.noarch 386/716 Verifying : perl-XString-0.005-10.fc39.x86_64 387/716 Verifying : perl-autodie-2.36-501.fc39.noarch 388/716 Verifying : perl-autovivification-0.18-20.fc39.x86_64 389/716 Verifying : perl-base-2.27-500.fc39.noarch 390/716 Verifying : perl-constant-1.33-501.fc39.noarch 391/716 Verifying : perl-deprecate-0.04-500.fc39.noarch 392/716 Verifying : perl-encoding-4:3.00-500.fc39.x86_64 393/716 Verifying : perl-if-0.61.000-500.fc39.noarch 394/716 Verifying : perl-interpreter-4:5.38.0-500.fc39.x86_64 395/716 Verifying : perl-libnet-3.15-501.fc39.noarch 396/716 Verifying : perl-libs-4:5.38.0-500.fc39.x86_64 397/716 Verifying : perl-libwww-perl-6.72-1.fc39.noarch 398/716 Verifying : perl-locale-1.10-500.fc39.noarch 399/716 Verifying : perl-meta-notation-5.38.0-500.fc39.noarch 400/716 Verifying : perl-mro-1.28-500.fc39.x86_64 401/716 Verifying : perl-namespace-autoclean-0.29-16.fc39.noarch 402/716 Verifying : perl-namespace-clean-0.27-24.fc39.noarch 403/716 Verifying : perl-open-1.13-500.fc39.noarch 404/716 Verifying : perl-overload-1.37-500.fc39.noarch 405/716 Verifying : perl-overloading-0.02-500.fc39.noarch 406/716 Verifying : perl-parent-1:0.241-500.fc39.noarch 407/716 Verifying : perl-podlators-1:5.01-500.fc39.noarch 408/716 Verifying : perl-sigtrap-1.10-500.fc39.noarch 409/716 Verifying : perl-subs-1.04-500.fc39.noarch 410/716 Verifying : perl-vars-1.05-500.fc39.noarch 411/716 Verifying : perl-version-8:0.99.30-1.fc40.x86_64 412/716 Verifying : perltidy-20230912-1.fc40.noarch 413/716 Verifying : pixman-0.42.2-2.fc39.x86_64 414/716 Verifying : python-pip-wheel-23.2.1-1.fc39.noarch 415/716 Verifying : python3-3.12.0~rc2-1.fc40.x86_64 416/716 Verifying : python3-libs-3.12.0~rc2-1.fc40.x86_64 417/716 Verifying : python3-setuptools-67.7.2-7.fc40.noarch 418/716 Verifying : sombok-2.4.0-20.fc39.x86_64 419/716 Verifying : sysprof-capture-devel-3.48.0-2.fc39.x86_64 420/716 Verifying : tcl-1:8.6.13-1.fc40.x86_64 421/716 Verifying : tcl-devel-1:8.6.13-1.fc40.x86_64 422/716 Verifying : teckit-2.5.12-1.fc40.x86_64 423/716 Verifying : texlive-ae-11:svn15878.1.4-69.fc39.noarch 424/716 Verifying : texlive-algorithms-11:svn42428-69.fc39.noarch 425/716 Verifying : texlive-alphalph-11:svn53087-69.fc39.noarch 426/716 Verifying : texlive-amscls-11:svn55378-69.fc39.noarch 427/716 Verifying : texlive-amsfonts-11:svn61937-69.fc39.noarch 428/716 Verifying : texlive-amsmath-11:svn63514-69.fc39.noarch 429/716 Verifying : texlive-anysize-11:svn15878.0-69.fc39.noarch 430/716 Verifying : texlive-atbegshi-11:svn53051-69.fc39.noarch 431/716 Verifying : texlive-attachfile-11:svn42099-69.fc39.noarch 432/716 Verifying : texlive-attachfile2-11:svn57959-77.fc39.noarch 433/716 Verifying : texlive-atveryend-11:svn53108-69.fc39.noarch 434/716 Verifying : texlive-auto-pst-pdf-11:svn56596-69.fc39.noarch 435/716 Verifying : texlive-auxhook-11:svn53173-69.fc39.noarch 436/716 Verifying : texlive-avantgar-11:svn61983-69.fc39.noarch 437/716 Verifying : texlive-babel-english-11:svn44495-69.fc39.noarch 438/716 Verifying : texlive-babel-11:svn65823-69.fc39.noarch 439/716 Verifying : texlive-babelbib-11:svn57349-69.fc39.noarch 440/716 Verifying : texlive-base-11:20230311-77.fc39.x86_64 441/716 Verifying : texlive-beamer-11:svn65984-69.fc39.noarch 442/716 Verifying : texlive-bera-11:svn20031.0-69.fc39.noarch 443/716 Verifying : texlive-beton-11:svn15878.0-69.fc39.noarch 444/716 Verifying : texlive-biblatex-11:svn66403-69.fc39.noarch 445/716 Verifying : texlive-bibtex-11:svn66186-77.fc39.x86_64 446/716 Verifying : texlive-bidi-11:svn65572-69.fc39.noarch 447/716 Verifying : texlive-bigintcalc-11:svn53172-69.fc39.noarch 448/716 Verifying : texlive-bitset-11:svn53837-69.fc39.noarch 449/716 Verifying : texlive-bookman-11:svn61719-69.fc39.noarch 450/716 Verifying : texlive-bookmark-11:svn56885-69.fc39.noarch 451/716 Verifying : texlive-booktabs-11:svn53402-69.fc39.noarch 452/716 Verifying : texlive-breakurl-11:svn29901.1.40-69.fc39.noarch 453/716 Verifying : texlive-breqn-11:svn60881-69.fc39.noarch 454/716 Verifying : texlive-caption-11:svn66580-69.fc39.noarch 455/716 Verifying : texlive-carlisle-11:svn59577-69.fc39.noarch 456/716 Verifying : texlive-catchfile-11:svn53084-69.fc39.noarch 457/716 Verifying : texlive-changepage-11:svn15878.1.0c-69.fc39.noar 458/716 Verifying : texlive-charter-11:svn15878.0-69.fc39.noarch 459/716 Verifying : texlive-cite-11:svn36428.5.5-69.fc39.noarch 460/716 Verifying : texlive-cm-super-11:svn15878.0-69.fc39.noarch 461/716 Verifying : texlive-cm-11:svn57963-69.fc39.noarch 462/716 Verifying : texlive-cmap-11:svn57640-69.fc39.noarch 463/716 Verifying : texlive-collection-basic-11:svn59159-69.fc39.noa 464/716 Verifying : texlive-collection-latex-11:svn63515-69.fc39.noa 465/716 Verifying : texlive-collection-latexrecommended-11:svn65512- 466/716 Verifying : texlive-colorprofiles-11:svn49086-69.fc39.noarch 467/716 Verifying : texlive-colortbl-11:svn64015-69.fc39.noarch 468/716 Verifying : texlive-courier-11:svn61719-69.fc39.noarch 469/716 Verifying : texlive-crop-11:svn55424-69.fc39.noarch 470/716 Verifying : texlive-csquotes-11:svn64389-69.fc39.noarch 471/716 Verifying : texlive-ctable-11:svn38672-69.fc39.noarch 472/716 Verifying : texlive-ctablestack-11:svn38514-69.fc39.noarch 473/716 Verifying : texlive-currfile-11:svn64673-69.fc39.noarch 474/716 Verifying : texlive-dehyph-11:svn48599-69.fc39.noarch 475/716 Verifying : texlive-dvipdfmx-11:svn66203-77.fc39.x86_64 476/716 Verifying : texlive-dvips-11:svn66203-77.fc39.x86_64 477/716 Verifying : texlive-ec-11:svn25033.1.0-69.fc39.noarch 478/716 Verifying : texlive-enctex-11:svn34957.0-69.fc39.noarch 479/716 Verifying : texlive-enumitem-11:svn51423-69.fc39.noarch 480/716 Verifying : texlive-epstopdf-pkg-11:svn53546-69.fc39.noarch 481/716 Verifying : texlive-epstopdf-11:svn66461-77.fc39.noarch 482/716 Verifying : texlive-eso-pic-11:svn56658-69.fc39.noarch 483/716 Verifying : texlive-etex-pkg-11:svn41784-69.fc39.noarch 484/716 Verifying : texlive-etex-11:svn66203-69.fc39.noarch 485/716 Verifying : texlive-etexcmds-11:svn53171-69.fc39.noarch 486/716 Verifying : texlive-etoolbox-11:svn56554-69.fc39.noarch 487/716 Verifying : texlive-euenc-11:svn19795.0.1h-69.fc39.noarch 488/716 Verifying : texlive-euler-11:svn42428-69.fc39.noarch 489/716 Verifying : texlive-everysel-11:svn57489-69.fc39.noarch 490/716 Verifying : texlive-everyshi-11:svn57001-69.fc39.noarch 491/716 Verifying : texlive-extsizes-11:svn17263.1.4a-69.fc39.noarch 492/716 Verifying : texlive-fancybox-11:svn18304.1.4-69.fc39.noarch 493/716 Verifying : texlive-fancyhdr-11:svn64977-69.fc39.noarch 494/716 Verifying : texlive-fancyref-11:svn15878.0.9c-69.fc39.noarch 495/716 Verifying : texlive-fancyvrb-11:svn65585-69.fc39.noarch 496/716 Verifying : texlive-filecontents-11:svn52142-69.fc39.noarch 497/716 Verifying : texlive-filehook-11:svn64822-69.fc39.noarch 498/716 Verifying : texlive-finstrut-11:svn21719.0.5-69.fc39.noarch 499/716 Verifying : texlive-firstaid-11:svn64892-69.fc39.noarch 500/716 Verifying : texlive-fix2col-11:svn38770-69.fc39.noarch 501/716 Verifying : texlive-float-11:svn15878.1.3d-69.fc39.noarch 502/716 Verifying : texlive-fontspec-11:svn63386-69.fc39.noarch 503/716 Verifying : texlive-footmisc-11:svn62524-69.fc39.noarch 504/716 Verifying : texlive-footnotehyper-11:svn60374-69.fc39.noarch 505/716 Verifying : texlive-fp-11:svn49719-69.fc39.noarch 506/716 Verifying : texlive-fpl-11:svn54512-69.fc39.noarch 507/716 Verifying : texlive-geometry-11:svn61719-69.fc39.noarch 508/716 Verifying : texlive-gettitlestring-11:svn53170-69.fc39.noarc 509/716 Verifying : texlive-glyphlist-11:svn54074-77.fc39.noarch 510/716 Verifying : texlive-graphics-cfg-11:svn41448-69.fc39.noarch 511/716 Verifying : texlive-graphics-def-11:svn64487-69.fc39.noarch 512/716 Verifying : texlive-graphics-11:svn66204-69.fc39.noarch 513/716 Verifying : texlive-grfext-11:svn53024-69.fc39.noarch 514/716 Verifying : texlive-grffile-11:svn52756-69.fc39.noarch 515/716 Verifying : texlive-gsftopk-11:svn52851-77.fc39.x86_64 516/716 Verifying : texlive-helvetic-11:svn61719-69.fc39.noarch 517/716 Verifying : texlive-hobsub-11:svn52810-69.fc39.noarch 518/716 Verifying : texlive-hologo-11:svn61719-69.fc39.noarch 519/716 Verifying : texlive-hopatch-11:svn65491-69.fc39.noarch 520/716 Verifying : texlive-hycolor-11:svn53584-69.fc39.noarch 521/716 Verifying : texlive-hypdoc-11:svn65678-69.fc39.noarch 522/716 Verifying : texlive-hyperref-11:svn65758-69.fc39.noarch 523/716 Verifying : texlive-hyph-utf8-11:svn61719-69.fc39.noarch 524/716 Verifying : texlive-hyphen-base-11:svn66413-69.fc39.noarch 525/716 Verifying : texlive-hyphenex-11:svn57387-69.fc39.noarch 526/716 Verifying : texlive-ifmtarg-11:svn47544-69.fc39.noarch 527/716 Verifying : texlive-ifplatform-11:svn45533-69.fc39.noarch 528/716 Verifying : texlive-iftex-11:svn61910-69.fc39.noarch 529/716 Verifying : texlive-index-11:svn24099.4.1beta-69.fc39.noarch 530/716 Verifying : texlive-infwarerr-11:svn53023-69.fc39.noarch 531/716 Verifying : texlive-intcalc-11:svn53168-69.fc39.noarch 532/716 Verifying : texlive-jknapltx-11:svn19440.0-69.fc39.noarch 533/716 Verifying : texlive-kastrup-11:svn15878.0-69.fc39.noarch 534/716 Verifying : texlive-knuth-lib-11:svn57963-69.fc39.noarch 535/716 Verifying : texlive-knuth-local-11:svn57963-69.fc39.noarch 536/716 Verifying : texlive-koma-script-11:svn64685-69.fc39.noarch 537/716 Verifying : texlive-kpathsea-11:svn66209-77.fc39.x86_64 538/716 Verifying : texlive-kvdefinekeys-11:svn53193-69.fc39.noarch 539/716 Verifying : texlive-kvoptions-11:svn63622-69.fc39.noarch 540/716 Verifying : texlive-kvsetkeys-11:svn64632-69.fc39.noarch 541/716 Verifying : texlive-l3backend-11:svn65573-69.fc39.noarch 542/716 Verifying : texlive-l3experimental-11:svn65621-69.fc39.noarc 543/716 Verifying : texlive-l3kernel-11:svn66094-69.fc39.noarch 544/716 Verifying : texlive-l3packages-11:svn65722-69.fc39.noarch 545/716 Verifying : texlive-latex-fonts-11:svn28888.0-69.fc39.noarch 546/716 Verifying : texlive-latex-lab-11:svn64892-69.fc39.noarch 547/716 Verifying : texlive-latex-11:svn65161-77.fc39.noarch 548/716 Verifying : texlive-latexbug-11:svn63596-69.fc39.noarch 549/716 Verifying : texlive-latexconfig-11:svn53525-69.fc39.noarch 550/716 Verifying : texlive-letltxmacro-11:svn53022-69.fc39.noarch 551/716 Verifying : texlive-lib-11:20230311-77.fc39.x86_64 552/716 Verifying : texlive-lineno-11:svn65586-69.fc39.noarch 553/716 Verifying : texlive-listings-11:svn66222-69.fc39.noarch 554/716 Verifying : texlive-lm-math-11:svn36915.1.959-69.fc39.noarch 555/716 Verifying : texlive-lm-11:svn65956-69.fc39.noarch 556/716 Verifying : texlive-logreq-11:svn53003-69.fc39.noarch 557/716 Verifying : texlive-ltabptch-11:svn17533.1.74d-69.fc39.noarc 558/716 Verifying : texlive-ltxcmds-11:svn56421-69.fc39.noarch 559/716 Verifying : texlive-ltxmisc-11:svn21927.0-69.fc39.noarch 560/716 Verifying : texlive-lua-alt-getopt-11:svn56414-69.fc39.noarc 561/716 Verifying : texlive-lua-uni-algos-11:svn62204-69.fc39.noarch 562/716 Verifying : texlive-luabidi-11:svn54512-69.fc39.noarch 563/716 Verifying : texlive-luahbtex-11:svn66186-77.fc39.x86_64 564/716 Verifying : texlive-lualatex-math-11:svn61464-69.fc39.noarch 565/716 Verifying : texlive-lualibs-11:svn64615-69.fc39.noarch 566/716 Verifying : texlive-luaotfload-11:svn64616-77.fc39.noarch 567/716 Verifying : texlive-luatex-11:svn66967-77.fc39.x86_64 568/716 Verifying : texlive-luatexbase-11:svn52663-69.fc39.noarch 569/716 Verifying : texlive-lwarp-11:svn66259-77.fc39.noarch 570/716 Verifying : texlive-makecmds-11:svn15878.0-69.fc39.noarch 571/716 Verifying : texlive-makeindex-11:svn62517-77.fc39.x86_64 572/716 Verifying : texlive-marginnote-11:svn48383-69.fc39.noarch 573/716 Verifying : texlive-marvosym-11:svn29349.2.2a-69.fc39.noarch 574/716 Verifying : texlive-mathpazo-11:svn52663-69.fc39.noarch 575/716 Verifying : texlive-mathspec-11:svn42773-69.fc39.noarch 576/716 Verifying : texlive-mathtools-11:svn63767-69.fc39.noarch 577/716 Verifying : texlive-mdwtools-11:svn15878.1.05.4-69.fc39.noar 578/716 Verifying : texlive-memoir-11:svn65040-69.fc39.noarch 579/716 Verifying : texlive-metafont-11:svn66186-77.fc39.x86_64 580/716 Verifying : texlive-metalogo-11:svn18611.0.12-69.fc39.noarch 581/716 Verifying : texlive-mflogo-11:svn42428-69.fc39.noarch 582/716 Verifying : texlive-mfnfss-11:svn46036-69.fc39.noarch 583/716 Verifying : texlive-mfware-11:svn66186-77.fc39.x86_64 584/716 Verifying : texlive-microtype-11:svn66587-69.fc39.noarch 585/716 Verifying : texlive-minitoc-11:svn61719-69.fc39.noarch 586/716 Verifying : texlive-mnsymbol-11:svn18651.1.4-69.fc39.noarch 587/716 Verifying : texlive-modes-11:svn61719-69.fc39.noarch 588/716 Verifying : texlive-mparhack-11:svn59066-69.fc39.noarch 589/716 Verifying : texlive-mptopdf-11:svn65952-77.fc39.noarch 590/716 Verifying : texlive-ms-11:svn57473-69.fc39.noarch 591/716 Verifying : texlive-multido-11:svn18302.1.42-69.fc39.noarch 592/716 Verifying : texlive-natbib-11:svn20668.8.31b-69.fc39.noarch 593/716 Verifying : texlive-newfloat-11:svn52906-69.fc39.noarch 594/716 Verifying : texlive-notoccite-11:svn18129.0-69.fc39.noarch 595/716 Verifying : texlive-ntgclass-11:svn65522-69.fc39.noarch 596/716 Verifying : texlive-oberdiek-11:svn65521-77.fc39.noarch 597/716 Verifying : texlive-pagesel-11:svn56105-69.fc39.noarch 598/716 Verifying : texlive-palatino-11:svn61719-69.fc39.noarch 599/716 Verifying : texlive-paralist-11:svn43021-69.fc39.noarch 600/716 Verifying : texlive-parallel-11:svn15878.0-69.fc39.noarch 601/716 Verifying : texlive-parskip-11:svn58358-69.fc39.noarch 602/716 Verifying : texlive-pdfcol-11:svn64469-69.fc39.noarch 603/716 Verifying : texlive-pdfcolfoot-11:svn65512-69.fc39.noarch 604/716 Verifying : texlive-pdfcolmk-11:svn52912-69.fc39.noarch 605/716 Verifying : texlive-pdfescape-11:svn53082-69.fc39.noarch 606/716 Verifying : texlive-pdflscape-11:svn64851-69.fc39.noarch 607/716 Verifying : texlive-pdfmanagement-testphase-11:svn66532-69.f 608/716 Verifying : texlive-pdfpages-11:svn65319-69.fc39.noarch 609/716 Verifying : texlive-pdftex-11:svn66243-77.fc39.x86_64 610/716 Verifying : texlive-pdftexcmds-11:svn55777-69.fc39.noarch 611/716 Verifying : texlive-pgf-11:svn65553-69.fc39.noarch 612/716 Verifying : texlive-picture-11:svn54867-69.fc39.noarch 613/716 Verifying : texlive-placeins-11:svn19848.2.2-69.fc39.noarch 614/716 Verifying : texlive-plain-11:svn57963-69.fc39.noarch 615/716 Verifying : texlive-polyglossia-11:svn65792-69.fc39.noarch 616/716 Verifying : texlive-psfrag-11:svn15878.3.04-69.fc39.noarch 617/716 Verifying : texlive-pslatex-11:svn57434-69.fc39.noarch 618/716 Verifying : texlive-psnfss-11:svn54694-69.fc39.noarch 619/716 Verifying : texlive-pspicture-11:svn15878.0-69.fc39.noarch 620/716 Verifying : texlive-pst-3d-11:svn17257.1.10-69.fc39.noarch 621/716 Verifying : texlive-pst-coil-11:svn62977-69.fc39.noarch 622/716 Verifying : texlive-pst-eps-11:svn15878.1.0-69.fc39.noarch 623/716 Verifying : texlive-pst-fill-11:svn60671-69.fc39.noarch 624/716 Verifying : texlive-pst-grad-11:svn15878.1.06-69.fc39.noarch 625/716 Verifying : texlive-pst-math-11:svn64732-69.fc39.noarch 626/716 Verifying : texlive-pst-node-11:svn61838-69.fc39.noarch 627/716 Verifying : texlive-pst-ovl-11:svn54963-69.fc39.noarch 628/716 Verifying : texlive-pst-plot-11:svn65346-69.fc39.noarch 629/716 Verifying : texlive-pst-text-11:svn49542-69.fc39.noarch 630/716 Verifying : texlive-pst-tools-11:svn60621-69.fc39.noarch 631/716 Verifying : texlive-pst-tree-11:svn60421-69.fc39.noarch 632/716 Verifying : texlive-pstricks-add-11:svn65067-69.fc39.noarch 633/716 Verifying : texlive-pstricks-11:svn65346-69.fc39.noarch 634/716 Verifying : texlive-ragged2e-11:svn66152-69.fc39.noarch 635/716 Verifying : texlive-rcs-11:svn15878.0-69.fc39.noarch 636/716 Verifying : texlive-realscripts-11:svn56594-69.fc39.noarch 637/716 Verifying : texlive-refcount-11:svn53164-69.fc39.noarch 638/716 Verifying : texlive-rerunfilecheck-11:svn63869-69.fc39.noarc 639/716 Verifying : texlive-rsfs-11:svn15878.0-69.fc39.noarch 640/716 Verifying : texlive-sansmath-11:svn17997.1.1-69.fc39.noarch 641/716 Verifying : texlive-sansmathaccent-11:svn53628-69.fc39.noarc 642/716 Verifying : texlive-sauerj-11:svn15878.0-69.fc39.noarch 643/716 Verifying : texlive-section-11:svn20180.0-69.fc39.noarch 644/716 Verifying : texlive-seminar-11:svn59801-69.fc39.noarch 645/716 Verifying : texlive-sepnum-11:svn20186.2.0-69.fc39.noarch 646/716 Verifying : texlive-setspace-11:svn65206-69.fc39.noarch 647/716 Verifying : texlive-showexpl-11:svn57414-69.fc39.noarch 648/716 Verifying : texlive-stringenc-11:svn52982-69.fc39.noarch 649/716 Verifying : texlive-subfig-11:svn15878.1.3-69.fc39.noarch 650/716 Verifying : texlive-symbol-11:svn61719-69.fc39.noarch 651/716 Verifying : texlive-tex-ini-files-11:svn40533-69.fc39.noarch 652/716 Verifying : texlive-tex-11:svn66186-77.fc39.x86_64 653/716 Verifying : texlive-texlive-common-doc-11:svn54176-69.fc39.n 654/716 Verifying : texlive-texlive-en-11:svn66572-77.fc39.noarch 655/716 Verifying : texlive-texlive-msg-translations-11:svn66593-69. 656/716 Verifying : texlive-texlive-scripts-11:svn66584-77.fc39.noar 657/716 Verifying : texlive-texlive.infra-11:svn66512-77.fc39.noarch 658/716 Verifying : texlive-textcase-11:svn63868-69.fc39.noarch 659/716 Verifying : texlive-thumbpdf-11:svn62518-77.fc39.noarch 660/716 Verifying : texlive-times-11:svn61719-69.fc39.noarch 661/716 Verifying : texlive-tipa-11:svn29349.1.3-69.fc39.noarch 662/716 Verifying : texlive-titlesec-11:svn59845-69.fc39.noarch 663/716 Verifying : texlive-tools-11:svn64892-69.fc39.noarch 664/716 Verifying : texlive-translator-11:svn59412-69.fc39.noarch 665/716 Verifying : texlive-transparent-11:svn64852-69.fc39.noarch 666/716 Verifying : texlive-typehtml-11:svn17134.0-69.fc39.noarch 667/716 Verifying : texlive-ucharcat-11:svn38907-69.fc39.noarch 668/716 Verifying : texlive-ucs-11:svn64114-69.fc39.noarch 669/716 Verifying : texlive-underscore-11:svn18261.0-69.fc39.noarch 670/716 Verifying : texlive-unicode-data-11:svn64423-69.fc39.noarch 671/716 Verifying : texlive-unicode-math-11:svn61719-69.fc39.noarch 672/716 Verifying : texlive-uniquecounter-11:svn53162-69.fc39.noarch 673/716 Verifying : texlive-url-11:svn32528.3.4-69.fc39.noarch 674/716 Verifying : texlive-utopia-11:svn15878.0-69.fc39.noarch 675/716 Verifying : texlive-varwidth-11:svn24104.0.92-69.fc39.noarch 676/716 Verifying : texlive-xcolor-11:svn63563-69.fc39.noarch 677/716 Verifying : texlive-xdvi-11:svn62387-77.fc39.x86_64 678/716 Verifying : texlive-xetex-11:svn66203-77.fc39.x86_64 679/716 Verifying : texlive-xetexconfig-11:svn45845-69.fc39.noarch 680/716 Verifying : texlive-xifthen-11:svn38929-69.fc39.noarch 681/716 Verifying : texlive-xkeyval-11:svn63616-69.fc39.noarch 682/716 Verifying : texlive-xltxtra-11:svn56594-69.fc39.noarch 683/716 Verifying : texlive-xpatch-11:svn54563-69.fc39.noarch 684/716 Verifying : texlive-xstring-11:svn65551-69.fc39.noarch 685/716 Verifying : texlive-xunicode-11:svn30466.0.981-69.fc39.noarc 686/716 Verifying : texlive-zapfding-11:svn61719-69.fc39.noarch 687/716 Verifying : texlive-zref-11:svn62977-69.fc39.noarch 688/716 Verifying : tk-1:8.6.13-1.fc40.x86_64 689/716 Verifying : tk-devel-1:8.6.13-1.fc40.x86_64 690/716 Verifying : tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 691/716 Verifying : tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noar 692/716 Verifying : tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_6 693/716 Verifying : ttmkfdir-3.0.9-69.fc39.x86_64 694/716 Verifying : tzdata-2023c-3.fc40.noarch 695/716 Verifying : tzdata-java-2023c-3.fc40.noarch 696/716 Verifying : urw-base35-bookman-fonts-20200910-18.fc39.noarch 697/716 Verifying : urw-base35-c059-fonts-20200910-18.fc39.noarch 698/716 Verifying : urw-base35-d050000l-fonts-20200910-18.fc39.noarc 699/716 Verifying : urw-base35-fonts-20200910-18.fc39.noarch 700/716 Verifying : urw-base35-fonts-common-20200910-18.fc39.noarch 701/716 Verifying : urw-base35-gothic-fonts-20200910-18.fc39.noarch 702/716 Verifying : urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39 703/716 Verifying : urw-base35-nimbus-roman-fonts-20200910-18.fc39.n 704/716 Verifying : urw-base35-nimbus-sans-fonts-20200910-18.fc39.no 705/716 Verifying : urw-base35-p052-fonts-20200910-18.fc39.noarch 706/716 Verifying : urw-base35-standard-symbols-ps-fonts-20200910-18 707/716 Verifying : urw-base35-z003-fonts-20200910-18.fc39.noarch 708/716 Verifying : xdg-utils-1.1.3-15.fc40.noarch 709/716 Verifying : xml-common-0.6.3-61.fc39.noarch 710/716 Verifying : xorg-x11-fonts-Type1-7.5-36.fc39.noarch 711/716 Verifying : xorg-x11-proto-devel-2023.2-3.fc40.noarch 712/716 Verifying : xpdf-libs-1:4.04-10.fc39.x86_64 713/716 Verifying : xz-devel-5.4.4-1.fc39.x86_64 714/716 Verifying : zlib-devel-1.2.13-4.fc39.x86_64 715/716 Verifying : zziplib-0.13.72-5.fc39.x86_64 716/716 Installed: R-Biobase-2.56.0-4.fc39.x86_64 R-BiocGenerics-0.42.0-4.fc39.noarch R-BiocIO-1.6.0-4.fc39.noarch R-BiocParallel-1.30.3-4.fc39.x86_64 R-Biostrings-2.64.1-4.fc39.x86_64 R-Biostrings-devel-2.64.1-4.fc39.x86_64 R-DelayedArray-0.22.0-7.fc39.x86_64 R-GenomeInfoDb-1.32.3-4.fc39.noarch R-GenomeInfoDbData-1.2.8-4.fc39.noarch R-GenomicAlignments-1.32.1-4.fc39.x86_64 R-GenomicRanges-1.48.0-4.fc39.x86_64 R-IRanges-2.30.1-4.fc39.x86_64 R-IRanges-devel-2.30.1-4.fc39.x86_64 R-MatrixGenerics-1.8.1-4.fc39.noarch R-RCurl-1.98.1.8-4.fc39.x86_64 R-Rsamtools-2.12.0-4.fc39.x86_64 R-S4Vectors-0.34.0-4.fc39.x86_64 R-S4Vectors-devel-0.34.0-4.fc39.x86_64 R-SummarizedExperiment-1.26.1-4.fc39.noarch R-XML-3.99.0.10-4.fc39.x86_64 R-XVector-0.36.0-4.fc39.x86_64 R-XVector-devel-0.36.0-4.fc39.x86_64 R-bitops-1.0.7-9.fc39.x86_64 R-core-4.3.1-3.fc39.x86_64 R-core-devel-4.3.1-3.fc39.x86_64 R-crayon-1.5.1-4.fc39.noarch R-devel-4.3.1-3.fc39.x86_64 R-formatR-1.13-5.fc39.noarch R-futile.logger-1.4.3-20.fc39.noarch R-futile.options-1.0.1-13.fc39.noarch R-java-4.3.1-3.fc39.x86_64 R-java-devel-4.3.1-3.fc39.x86_64 R-lambda.r-1.2.4-13.fc39.noarch R-matrixStats-0.62.0-4.fc39.x86_64 R-restfulr-0.0.15-4.fc39.x86_64 R-rjson-0.2.21-4.fc39.x86_64 R-rpm-macros-1.2.1-7.fc39.noarch R-snow-0.4.4-13.fc39.noarch R-yaml-2.3.5-4.fc39.x86_64 abattis-cantarell-vf-fonts-0.301-10.fc39.noarch adobe-mappings-cmap-20230622-1.fc39.noarch adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch adobe-mappings-pdf-20190401-5.fc39.noarch alsa-lib-1.2.10-3.fc40.x86_64 annobin-docs-12.26-1.fc40.noarch annobin-plugin-gcc-12.26-1.fc40.x86_64 avahi-libs-0.8-24.fc39.x86_64 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perl-Business-ISSN-1.005-8.fc39.noarch perl-Carp-1.54-500.fc39.noarch perl-Class-Accessor-0.51-18.fc39.noarch perl-Class-Data-Inheritable-0.09-6.fc39.noarch perl-Class-Inspector-1.36-14.fc39.noarch perl-Class-Method-Modifiers-2.15-2.fc39.noarch perl-Class-Singleton-1.6-9.fc39.noarch perl-Class-Struct-0.68-500.fc39.noarch perl-Clone-0.46-4.fc39.x86_64 perl-Compress-Raw-Bzip2-2.206-1.fc39.x86_64 perl-Compress-Raw-Zlib-2.206-1.fc39.x86_64 perl-Convert-ASN1-0.34-1.fc40.noarch perl-Data-Compare-1.29-2.fc39.noarch perl-Data-Dump-1.25-8.fc39.noarch perl-Data-Dumper-2.188-501.fc39.x86_64 perl-Data-OptList-0.114-2.fc39.noarch perl-Data-Uniqid-0.12-31.fc39.noarch perl-Date-ISO8601-0.005-18.fc39.noarch perl-Date-Manip-6.92-2.fc39.noarch perl-DateTime-2:1.59-5.fc39.x86_64 perl-DateTime-Calendar-Julian-0.107-5.fc39.noarch perl-DateTime-Format-Builder-0.8300-11.fc39.noarch perl-DateTime-Format-Strptime-1:1.79-8.fc39.noarch perl-DateTime-Locale-1.39-2.fc39.noarch perl-DateTime-TimeZone-2.60-4.fc39.noarch perl-DateTime-TimeZone-SystemV-0.010-19.fc39.noarch perl-DateTime-TimeZone-Tzfile-0.011-19.fc39.noarch perl-Devel-CallChecker-0.009-3.fc39.x86_64 perl-Devel-Caller-2.07-3.fc39.x86_64 perl-Devel-GlobalDestruction-0.14-22.fc39.noarch perl-Devel-LexAlias-0.05-34.fc39.x86_64 perl-Devel-StackTrace-1:2.04-16.fc39.noarch perl-Digest-1.20-500.fc39.noarch perl-Digest-HMAC-1.04-8.fc39.noarch perl-Digest-MD5-2.58-500.fc39.x86_64 perl-Digest-SHA-1:6.04-501.fc39.x86_64 perl-Dist-CheckConflicts-0.11-28.fc39.noarch perl-DynaLoader-1.54-500.fc39.x86_64 perl-DynaLoader-Functions-0.004-2.fc39.noarch perl-Email-Date-Format-1.008-2.fc39.noarch perl-Encode-4:3.19-500.fc39.x86_64 perl-Encode-Locale-1.05-27.fc39.noarch perl-English-1.11-500.fc39.noarch perl-Errno-1.37-500.fc39.x86_64 perl-Eval-Closure-0.14-21.fc39.noarch perl-Exception-Class-1.45-8.fc39.noarch perl-Exporter-5.77-500.fc39.noarch perl-ExtUtils-MM-Utils-2:7.70-501.fc39.noarch perl-Fcntl-1.15-500.fc39.x86_64 perl-File-Basename-2.86-500.fc39.noarch perl-File-Compare-1.100.700-500.fc39.noarch perl-File-Copy-2.41-500.fc39.noarch perl-File-Find-1.43-500.fc39.noarch perl-File-Find-Rule-0.34-26.fc39.noarch perl-File-Listing-6.16-1.fc39.noarch perl-File-Path-2.18-500.fc39.noarch perl-File-ShareDir-1.118-9.fc39.noarch perl-File-Slurper-0.014-3.fc39.noarch perl-File-Temp-1:0.231.100-500.fc39.noarch perl-File-stat-1.13-500.fc39.noarch perl-FileHandle-2.05-500.fc39.noarch perl-Filter-2:1.64-501.fc39.x86_64 perl-GSSAPI-0.28-43.fc39.x86_64 perl-Getopt-Long-1:2.54-500.fc39.noarch perl-Getopt-Std-1.13-500.fc39.noarch perl-HTML-Parser-3.81-3.fc39.x86_64 perl-HTML-Tagset-3.20-55.fc40.noarch perl-HTTP-Cookies-6.10-10.fc39.noarch perl-HTTP-Date-6.06-2.fc39.noarch perl-HTTP-Message-6.44-3.fc39.noarch perl-HTTP-Negotiate-6.01-36.fc39.noarch perl-HTTP-Tiny-0.088-3.fc39.noarch perl-Hash-Util-FieldHash-1.26-500.fc39.x86_64 perl-I18N-LangTags-0.45-500.fc39.noarch perl-I18N-Langinfo-0.22-500.fc39.x86_64 perl-IO-1.52-500.fc39.x86_64 perl-IO-Compress-2.206-1.fc39.noarch perl-IO-HTML-1.004-11.fc39.noarch perl-IO-Socket-IP-0.42-1.fc39.noarch perl-IO-Socket-SSL-2.083-3.fc39.noarch perl-IO-String-1.08-48.fc39.noarch perl-IPC-Cmd-2:1.04-501.fc39.noarch perl-IPC-Open3-1.22-500.fc39.noarch perl-IPC-Run3-0.048-29.fc39.noarch perl-IPC-SysV-2.09-501.fc39.x86_64 perl-IPC-System-Simple-1.30-11.fc39.noarch perl-JSON-4.10-3.fc39.noarch perl-LDAP-1:0.68-11.fc39.noarch perl-LWP-MediaTypes-6.04-15.fc39.noarch perl-LWP-Protocol-https-6.11-1.fc39.noarch perl-Lingua-Translit-0.29-4.fc39.noarch perl-List-AllUtils-0.19-10.fc39.noarch perl-List-SomeUtils-0.59-3.fc39.noarch perl-List-UtilsBy-0.12-7.fc39.noarch perl-Locale-Maketext-1.33-501.fc39.noarch perl-Locale-Maketext-Simple-1:0.21-500.fc39.noarch perl-Log-Dispatch-2.71-2.fc39.noarch perl-Log-Dispatch-FileRotate-1.38-7.fc39.noarch perl-Log-Log4perl-1.57-3.fc39.noarch perl-MIME-Base64-3.16-500.fc39.x86_64 perl-MIME-Charset-1.013.1-3.fc39.noarch perl-MIME-Lite-3.033-8.fc39.noarch perl-MIME-Types-2.24-3.fc39.noarch perl-MRO-Compat-0.15-7.fc39.noarch perl-Mail-Sender-1:0.903-22.fc39.noarch perl-Mail-Sendmail-0.80-18.fc39.noarch perl-MailTools-2.21-14.fc39.noarch perl-Math-BigInt-1:1.9998.39-2.fc39.noarch perl-Math-BigRat-0.2624-500.fc39.noarch perl-Math-Complex-1.62-500.fc39.noarch perl-Module-CoreList-1:5.20230820-1.fc40.noarch perl-Module-Implementation-0.09-37.fc39.noarch perl-Module-Load-1:0.36-500.fc39.noarch perl-Module-Load-Conditional-0.74-500.fc39.noarch perl-Module-Metadata-1.000038-3.fc39.noarch perl-Module-Runtime-0.016-20.fc39.noarch perl-Mozilla-CA-20230821-1.fc40.noarch perl-NTLM-1.09-36.fc39.noarch perl-Net-HTTP-6.23-2.fc39.noarch perl-Net-SMTP-SSL-1.04-22.fc40.noarch perl-Net-SSLeay-1.92-10.fc39.x86_64 perl-Number-Compare-0.03-36.fc39.noarch perl-Opcode-1.64-500.fc39.x86_64 perl-POSIX-2.13-500.fc39.x86_64 perl-Package-Generator-1.106-29.fc39.noarch perl-Package-Stash-0.40-5.fc39.noarch perl-Package-Stash-XS-0.30-5.fc39.x86_64 perl-PadWalker-2.5-10.fc39.x86_64 perl-Params-Check-1:0.38-500.fc39.noarch perl-Params-Classify-0.015-20.fc39.x86_64 perl-Params-Util-1.102-12.fc39.x86_64 perl-Params-Validate-1.31-5.fc39.x86_64 perl-Params-ValidationCompiler-0.31-3.fc39.noarch perl-Parse-RecDescent-1.967015-20.fc39.noarch perl-PathTools-3.89-500.fc39.x86_64 perl-Pod-Escapes-1:1.07-501.fc40.noarch perl-Pod-Html-1.34-500.fc39.noarch perl-Pod-Perldoc-3.28.01-501.fc39.noarch perl-Pod-Simple-1:3.45-4.fc39.noarch perl-Pod-Usage-4:2.03-500.fc39.noarch perl-Ref-Util-0.204-18.fc39.noarch perl-Ref-Util-XS-0.117-20.fc39.x86_64 perl-Regexp-Common-2017060201-22.fc39.noarch perl-Role-Tiny-2.002004-9.fc39.noarch perl-Safe-2.44-500.fc39.noarch perl-Scalar-List-Utils-5:1.63-500.fc39.x86_64 perl-SelectSaver-1.02-500.fc39.noarch perl-Socket-4:2.037-3.fc39.x86_64 perl-Sort-Key-1.33-28.fc39.x86_64 perl-Specio-0.48-4.fc39.noarch perl-Storable-1:3.32-500.fc39.x86_64 perl-Sub-Exporter-0.990-1.fc39.noarch perl-Sub-Exporter-Progressive-0.001013-22.fc39.noarch perl-Sub-Identify-0.14-24.fc39.x86_64 perl-Sub-Install-0.929-3.fc39.noarch perl-Symbol-1.09-500.fc39.noarch perl-Sys-Hostname-1.25-500.fc39.x86_64 perl-Sys-Syslog-0.36-501.fc39.x86_64 perl-Term-ANSIColor-5.01-501.fc39.noarch perl-Term-Cap-1.18-500.fc39.noarch perl-Text-Balanced-2.06-500.fc39.noarch perl-Text-BibTeX-0.89-3.fc39.x86_64 perl-Text-CSV-2.03-1.fc40.noarch perl-Text-Glob-0.11-21.fc39.noarch perl-Text-ParseWords-3.31-500.fc39.noarch perl-Text-Roman-3.5-25.fc39.noarch perl-Text-Soundex-3.05-28.fc39.x86_64 perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch perl-Text-Unidecode-1.30-22.fc39.noarch perl-Tie-4.6-500.fc39.noarch perl-Tie-Cycle-1.227-9.fc39.noarch perl-Tie-RefHash-1.40-500.fc39.noarch perl-Time-HiRes-4:1.9775-500.fc39.x86_64 perl-Time-Local-2:1.350-3.fc39.noarch perl-TimeDate-1:2.33-11.fc39.noarch perl-Try-Tiny-0.31-6.fc39.noarch perl-URI-5.21-1.fc40.noarch perl-Unicode-Collate-1.31-500.fc39.x86_64 perl-Unicode-LineBreak-2019.001-18.fc39.x86_64 perl-Unicode-Normalize-1.32-500.fc39.x86_64 perl-Unicode-UCD-0.78-500.fc39.noarch perl-Variable-Magic-0.63-4.fc39.x86_64 perl-WWW-RobotRules-6.02-37.fc39.noarch perl-XML-LibXML-1:2.0209-2.fc39.x86_64 perl-XML-LibXML-Simple-1.01-12.fc39.noarch perl-XML-LibXSLT-2.002.001-3.fc39.x86_64 perl-XML-NamespaceSupport-1.12-21.fc40.noarch perl-XML-Parser-2.46-15.fc39.x86_64 perl-XML-SAX-1.02-13.fc39.noarch perl-XML-SAX-Base-1.09-21.fc40.noarch perl-XML-Writer-0.900-12.fc39.noarch perl-XML-XPath-1.48-4.fc39.noarch perl-XString-0.005-10.fc39.x86_64 perl-autodie-2.36-501.fc39.noarch perl-autovivification-0.18-20.fc39.x86_64 perl-base-2.27-500.fc39.noarch perl-constant-1.33-501.fc39.noarch perl-deprecate-0.04-500.fc39.noarch perl-encoding-4:3.00-500.fc39.x86_64 perl-if-0.61.000-500.fc39.noarch perl-interpreter-4:5.38.0-500.fc39.x86_64 perl-libnet-3.15-501.fc39.noarch perl-libs-4:5.38.0-500.fc39.x86_64 perl-libwww-perl-6.72-1.fc39.noarch perl-locale-1.10-500.fc39.noarch perl-meta-notation-5.38.0-500.fc39.noarch perl-mro-1.28-500.fc39.x86_64 perl-namespace-autoclean-0.29-16.fc39.noarch perl-namespace-clean-0.27-24.fc39.noarch perl-open-1.13-500.fc39.noarch perl-overload-1.37-500.fc39.noarch perl-overloading-0.02-500.fc39.noarch perl-parent-1:0.241-500.fc39.noarch perl-podlators-1:5.01-500.fc39.noarch perl-sigtrap-1.10-500.fc39.noarch perl-subs-1.04-500.fc39.noarch perl-vars-1.05-500.fc39.noarch perl-version-8:0.99.30-1.fc40.x86_64 perltidy-20230912-1.fc40.noarch pixman-0.42.2-2.fc39.x86_64 python-pip-wheel-23.2.1-1.fc39.noarch python3-3.12.0~rc2-1.fc40.x86_64 python3-libs-3.12.0~rc2-1.fc40.x86_64 python3-setuptools-67.7.2-7.fc40.noarch sombok-2.4.0-20.fc39.x86_64 sysprof-capture-devel-3.48.0-2.fc39.x86_64 tcl-1:8.6.13-1.fc40.x86_64 tcl-devel-1:8.6.13-1.fc40.x86_64 teckit-2.5.12-1.fc40.x86_64 texlive-ae-11:svn15878.1.4-69.fc39.noarch texlive-algorithms-11:svn42428-69.fc39.noarch texlive-alphalph-11:svn53087-69.fc39.noarch texlive-amscls-11:svn55378-69.fc39.noarch texlive-amsfonts-11:svn61937-69.fc39.noarch texlive-amsmath-11:svn63514-69.fc39.noarch texlive-anysize-11:svn15878.0-69.fc39.noarch texlive-atbegshi-11:svn53051-69.fc39.noarch texlive-attachfile-11:svn42099-69.fc39.noarch texlive-attachfile2-11:svn57959-77.fc39.noarch texlive-atveryend-11:svn53108-69.fc39.noarch texlive-auto-pst-pdf-11:svn56596-69.fc39.noarch texlive-auxhook-11:svn53173-69.fc39.noarch texlive-avantgar-11:svn61983-69.fc39.noarch texlive-babel-11:svn65823-69.fc39.noarch texlive-babel-english-11:svn44495-69.fc39.noarch texlive-babelbib-11:svn57349-69.fc39.noarch texlive-base-11:20230311-77.fc39.x86_64 texlive-beamer-11:svn65984-69.fc39.noarch texlive-bera-11:svn20031.0-69.fc39.noarch texlive-beton-11:svn15878.0-69.fc39.noarch texlive-biblatex-11:svn66403-69.fc39.noarch texlive-bibtex-11:svn66186-77.fc39.x86_64 texlive-bidi-11:svn65572-69.fc39.noarch texlive-bigintcalc-11:svn53172-69.fc39.noarch texlive-bitset-11:svn53837-69.fc39.noarch texlive-bookman-11:svn61719-69.fc39.noarch texlive-bookmark-11:svn56885-69.fc39.noarch texlive-booktabs-11:svn53402-69.fc39.noarch texlive-breakurl-11:svn29901.1.40-69.fc39.noarch texlive-breqn-11:svn60881-69.fc39.noarch texlive-caption-11:svn66580-69.fc39.noarch texlive-carlisle-11:svn59577-69.fc39.noarch texlive-catchfile-11:svn53084-69.fc39.noarch texlive-changepage-11:svn15878.1.0c-69.fc39.noarch texlive-charter-11:svn15878.0-69.fc39.noarch texlive-cite-11:svn36428.5.5-69.fc39.noarch texlive-cm-11:svn57963-69.fc39.noarch texlive-cm-super-11:svn15878.0-69.fc39.noarch texlive-cmap-11:svn57640-69.fc39.noarch texlive-collection-basic-11:svn59159-69.fc39.noarch texlive-collection-latex-11:svn63515-69.fc39.noarch texlive-collection-latexrecommended-11:svn65512-69.fc39.noarch texlive-colorprofiles-11:svn49086-69.fc39.noarch texlive-colortbl-11:svn64015-69.fc39.noarch texlive-courier-11:svn61719-69.fc39.noarch texlive-crop-11:svn55424-69.fc39.noarch texlive-csquotes-11:svn64389-69.fc39.noarch texlive-ctable-11:svn38672-69.fc39.noarch texlive-ctablestack-11:svn38514-69.fc39.noarch texlive-currfile-11:svn64673-69.fc39.noarch texlive-dehyph-11:svn48599-69.fc39.noarch texlive-dvipdfmx-11:svn66203-77.fc39.x86_64 texlive-dvips-11:svn66203-77.fc39.x86_64 texlive-ec-11:svn25033.1.0-69.fc39.noarch texlive-enctex-11:svn34957.0-69.fc39.noarch texlive-enumitem-11:svn51423-69.fc39.noarch texlive-epstopdf-11:svn66461-77.fc39.noarch texlive-epstopdf-pkg-11:svn53546-69.fc39.noarch texlive-eso-pic-11:svn56658-69.fc39.noarch texlive-etex-11:svn66203-69.fc39.noarch texlive-etex-pkg-11:svn41784-69.fc39.noarch texlive-etexcmds-11:svn53171-69.fc39.noarch texlive-etoolbox-11:svn56554-69.fc39.noarch texlive-euenc-11:svn19795.0.1h-69.fc39.noarch texlive-euler-11:svn42428-69.fc39.noarch texlive-everysel-11:svn57489-69.fc39.noarch texlive-everyshi-11:svn57001-69.fc39.noarch texlive-extsizes-11:svn17263.1.4a-69.fc39.noarch texlive-fancybox-11:svn18304.1.4-69.fc39.noarch texlive-fancyhdr-11:svn64977-69.fc39.noarch texlive-fancyref-11:svn15878.0.9c-69.fc39.noarch texlive-fancyvrb-11:svn65585-69.fc39.noarch texlive-filecontents-11:svn52142-69.fc39.noarch texlive-filehook-11:svn64822-69.fc39.noarch texlive-finstrut-11:svn21719.0.5-69.fc39.noarch texlive-firstaid-11:svn64892-69.fc39.noarch texlive-fix2col-11:svn38770-69.fc39.noarch texlive-float-11:svn15878.1.3d-69.fc39.noarch texlive-fontspec-11:svn63386-69.fc39.noarch texlive-footmisc-11:svn62524-69.fc39.noarch texlive-footnotehyper-11:svn60374-69.fc39.noarch texlive-fp-11:svn49719-69.fc39.noarch texlive-fpl-11:svn54512-69.fc39.noarch texlive-geometry-11:svn61719-69.fc39.noarch texlive-gettitlestring-11:svn53170-69.fc39.noarch texlive-glyphlist-11:svn54074-77.fc39.noarch texlive-graphics-11:svn66204-69.fc39.noarch texlive-graphics-cfg-11:svn41448-69.fc39.noarch texlive-graphics-def-11:svn64487-69.fc39.noarch texlive-grfext-11:svn53024-69.fc39.noarch texlive-grffile-11:svn52756-69.fc39.noarch texlive-gsftopk-11:svn52851-77.fc39.x86_64 texlive-helvetic-11:svn61719-69.fc39.noarch texlive-hobsub-11:svn52810-69.fc39.noarch texlive-hologo-11:svn61719-69.fc39.noarch texlive-hopatch-11:svn65491-69.fc39.noarch texlive-hycolor-11:svn53584-69.fc39.noarch texlive-hypdoc-11:svn65678-69.fc39.noarch texlive-hyperref-11:svn65758-69.fc39.noarch texlive-hyph-utf8-11:svn61719-69.fc39.noarch texlive-hyphen-base-11:svn66413-69.fc39.noarch texlive-hyphenex-11:svn57387-69.fc39.noarch texlive-ifmtarg-11:svn47544-69.fc39.noarch texlive-ifplatform-11:svn45533-69.fc39.noarch texlive-iftex-11:svn61910-69.fc39.noarch texlive-index-11:svn24099.4.1beta-69.fc39.noarch texlive-infwarerr-11:svn53023-69.fc39.noarch texlive-intcalc-11:svn53168-69.fc39.noarch texlive-jknapltx-11:svn19440.0-69.fc39.noarch texlive-kastrup-11:svn15878.0-69.fc39.noarch texlive-knuth-lib-11:svn57963-69.fc39.noarch texlive-knuth-local-11:svn57963-69.fc39.noarch texlive-koma-script-11:svn64685-69.fc39.noarch texlive-kpathsea-11:svn66209-77.fc39.x86_64 texlive-kvdefinekeys-11:svn53193-69.fc39.noarch texlive-kvoptions-11:svn63622-69.fc39.noarch texlive-kvsetkeys-11:svn64632-69.fc39.noarch texlive-l3backend-11:svn65573-69.fc39.noarch texlive-l3experimental-11:svn65621-69.fc39.noarch texlive-l3kernel-11:svn66094-69.fc39.noarch texlive-l3packages-11:svn65722-69.fc39.noarch texlive-latex-11:svn65161-77.fc39.noarch texlive-latex-fonts-11:svn28888.0-69.fc39.noarch texlive-latex-lab-11:svn64892-69.fc39.noarch texlive-latexbug-11:svn63596-69.fc39.noarch texlive-latexconfig-11:svn53525-69.fc39.noarch texlive-letltxmacro-11:svn53022-69.fc39.noarch texlive-lib-11:20230311-77.fc39.x86_64 texlive-lineno-11:svn65586-69.fc39.noarch texlive-listings-11:svn66222-69.fc39.noarch texlive-lm-11:svn65956-69.fc39.noarch texlive-lm-math-11:svn36915.1.959-69.fc39.noarch texlive-logreq-11:svn53003-69.fc39.noarch texlive-ltabptch-11:svn17533.1.74d-69.fc39.noarch texlive-ltxcmds-11:svn56421-69.fc39.noarch texlive-ltxmisc-11:svn21927.0-69.fc39.noarch texlive-lua-alt-getopt-11:svn56414-69.fc39.noarch texlive-lua-uni-algos-11:svn62204-69.fc39.noarch texlive-luabidi-11:svn54512-69.fc39.noarch texlive-luahbtex-11:svn66186-77.fc39.x86_64 texlive-lualatex-math-11:svn61464-69.fc39.noarch texlive-lualibs-11:svn64615-69.fc39.noarch texlive-luaotfload-11:svn64616-77.fc39.noarch texlive-luatex-11:svn66967-77.fc39.x86_64 texlive-luatexbase-11:svn52663-69.fc39.noarch texlive-lwarp-11:svn66259-77.fc39.noarch texlive-makecmds-11:svn15878.0-69.fc39.noarch texlive-makeindex-11:svn62517-77.fc39.x86_64 texlive-marginnote-11:svn48383-69.fc39.noarch texlive-marvosym-11:svn29349.2.2a-69.fc39.noarch texlive-mathpazo-11:svn52663-69.fc39.noarch texlive-mathspec-11:svn42773-69.fc39.noarch texlive-mathtools-11:svn63767-69.fc39.noarch texlive-mdwtools-11:svn15878.1.05.4-69.fc39.noarch texlive-memoir-11:svn65040-69.fc39.noarch texlive-metafont-11:svn66186-77.fc39.x86_64 texlive-metalogo-11:svn18611.0.12-69.fc39.noarch texlive-mflogo-11:svn42428-69.fc39.noarch texlive-mfnfss-11:svn46036-69.fc39.noarch texlive-mfware-11:svn66186-77.fc39.x86_64 texlive-microtype-11:svn66587-69.fc39.noarch texlive-minitoc-11:svn61719-69.fc39.noarch texlive-mnsymbol-11:svn18651.1.4-69.fc39.noarch texlive-modes-11:svn61719-69.fc39.noarch texlive-mparhack-11:svn59066-69.fc39.noarch texlive-mptopdf-11:svn65952-77.fc39.noarch texlive-ms-11:svn57473-69.fc39.noarch texlive-multido-11:svn18302.1.42-69.fc39.noarch texlive-natbib-11:svn20668.8.31b-69.fc39.noarch texlive-newfloat-11:svn52906-69.fc39.noarch texlive-notoccite-11:svn18129.0-69.fc39.noarch texlive-ntgclass-11:svn65522-69.fc39.noarch texlive-oberdiek-11:svn65521-77.fc39.noarch texlive-pagesel-11:svn56105-69.fc39.noarch texlive-palatino-11:svn61719-69.fc39.noarch texlive-paralist-11:svn43021-69.fc39.noarch texlive-parallel-11:svn15878.0-69.fc39.noarch texlive-parskip-11:svn58358-69.fc39.noarch texlive-pdfcol-11:svn64469-69.fc39.noarch texlive-pdfcolfoot-11:svn65512-69.fc39.noarch texlive-pdfcolmk-11:svn52912-69.fc39.noarch texlive-pdfescape-11:svn53082-69.fc39.noarch texlive-pdflscape-11:svn64851-69.fc39.noarch texlive-pdfmanagement-testphase-11:svn66532-69.fc39.noarch texlive-pdfpages-11:svn65319-69.fc39.noarch texlive-pdftex-11:svn66243-77.fc39.x86_64 texlive-pdftexcmds-11:svn55777-69.fc39.noarch texlive-pgf-11:svn65553-69.fc39.noarch texlive-picture-11:svn54867-69.fc39.noarch texlive-placeins-11:svn19848.2.2-69.fc39.noarch texlive-plain-11:svn57963-69.fc39.noarch texlive-polyglossia-11:svn65792-69.fc39.noarch texlive-psfrag-11:svn15878.3.04-69.fc39.noarch texlive-pslatex-11:svn57434-69.fc39.noarch texlive-psnfss-11:svn54694-69.fc39.noarch texlive-pspicture-11:svn15878.0-69.fc39.noarch texlive-pst-3d-11:svn17257.1.10-69.fc39.noarch texlive-pst-coil-11:svn62977-69.fc39.noarch texlive-pst-eps-11:svn15878.1.0-69.fc39.noarch texlive-pst-fill-11:svn60671-69.fc39.noarch texlive-pst-grad-11:svn15878.1.06-69.fc39.noarch texlive-pst-math-11:svn64732-69.fc39.noarch texlive-pst-node-11:svn61838-69.fc39.noarch texlive-pst-ovl-11:svn54963-69.fc39.noarch texlive-pst-plot-11:svn65346-69.fc39.noarch texlive-pst-text-11:svn49542-69.fc39.noarch texlive-pst-tools-11:svn60621-69.fc39.noarch texlive-pst-tree-11:svn60421-69.fc39.noarch texlive-pstricks-11:svn65346-69.fc39.noarch texlive-pstricks-add-11:svn65067-69.fc39.noarch texlive-ragged2e-11:svn66152-69.fc39.noarch texlive-rcs-11:svn15878.0-69.fc39.noarch texlive-realscripts-11:svn56594-69.fc39.noarch texlive-refcount-11:svn53164-69.fc39.noarch texlive-rerunfilecheck-11:svn63869-69.fc39.noarch texlive-rsfs-11:svn15878.0-69.fc39.noarch texlive-sansmath-11:svn17997.1.1-69.fc39.noarch texlive-sansmathaccent-11:svn53628-69.fc39.noarch texlive-sauerj-11:svn15878.0-69.fc39.noarch texlive-section-11:svn20180.0-69.fc39.noarch texlive-seminar-11:svn59801-69.fc39.noarch texlive-sepnum-11:svn20186.2.0-69.fc39.noarch texlive-setspace-11:svn65206-69.fc39.noarch texlive-showexpl-11:svn57414-69.fc39.noarch texlive-stringenc-11:svn52982-69.fc39.noarch texlive-subfig-11:svn15878.1.3-69.fc39.noarch texlive-symbol-11:svn61719-69.fc39.noarch texlive-tex-11:svn66186-77.fc39.x86_64 texlive-tex-ini-files-11:svn40533-69.fc39.noarch texlive-texlive-common-doc-11:svn54176-69.fc39.noarch texlive-texlive-en-11:svn66572-77.fc39.noarch texlive-texlive-msg-translations-11:svn66593-69.fc39.noarch texlive-texlive-scripts-11:svn66584-77.fc39.noarch texlive-texlive.infra-11:svn66512-77.fc39.noarch texlive-textcase-11:svn63868-69.fc39.noarch texlive-thumbpdf-11:svn62518-77.fc39.noarch texlive-times-11:svn61719-69.fc39.noarch texlive-tipa-11:svn29349.1.3-69.fc39.noarch texlive-titlesec-11:svn59845-69.fc39.noarch texlive-tools-11:svn64892-69.fc39.noarch texlive-translator-11:svn59412-69.fc39.noarch texlive-transparent-11:svn64852-69.fc39.noarch texlive-typehtml-11:svn17134.0-69.fc39.noarch texlive-ucharcat-11:svn38907-69.fc39.noarch texlive-ucs-11:svn64114-69.fc39.noarch texlive-underscore-11:svn18261.0-69.fc39.noarch texlive-unicode-data-11:svn64423-69.fc39.noarch texlive-unicode-math-11:svn61719-69.fc39.noarch texlive-uniquecounter-11:svn53162-69.fc39.noarch texlive-url-11:svn32528.3.4-69.fc39.noarch texlive-utopia-11:svn15878.0-69.fc39.noarch texlive-varwidth-11:svn24104.0.92-69.fc39.noarch texlive-xcolor-11:svn63563-69.fc39.noarch texlive-xdvi-11:svn62387-77.fc39.x86_64 texlive-xetex-11:svn66203-77.fc39.x86_64 texlive-xetexconfig-11:svn45845-69.fc39.noarch texlive-xifthen-11:svn38929-69.fc39.noarch texlive-xkeyval-11:svn63616-69.fc39.noarch texlive-xltxtra-11:svn56594-69.fc39.noarch texlive-xpatch-11:svn54563-69.fc39.noarch texlive-xstring-11:svn65551-69.fc39.noarch texlive-xunicode-11:svn30466.0.981-69.fc39.noarch texlive-zapfding-11:svn61719-69.fc39.noarch texlive-zref-11:svn62977-69.fc39.noarch tk-1:8.6.13-1.fc40.x86_64 tk-devel-1:8.6.13-1.fc40.x86_64 tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noarch tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 ttmkfdir-3.0.9-69.fc39.x86_64 tzdata-2023c-3.fc40.noarch tzdata-java-2023c-3.fc40.noarch urw-base35-bookman-fonts-20200910-18.fc39.noarch urw-base35-c059-fonts-20200910-18.fc39.noarch urw-base35-d050000l-fonts-20200910-18.fc39.noarch urw-base35-fonts-20200910-18.fc39.noarch urw-base35-fonts-common-20200910-18.fc39.noarch urw-base35-gothic-fonts-20200910-18.fc39.noarch urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch urw-base35-p052-fonts-20200910-18.fc39.noarch urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch urw-base35-z003-fonts-20200910-18.fc39.noarch xdg-utils-1.1.3-15.fc40.noarch xml-common-0.6.3-61.fc39.noarch xorg-x11-fonts-Type1-7.5-36.fc39.noarch xorg-x11-proto-devel-2023.2-3.fc40.noarch xpdf-libs-1:4.04-10.fc39.x86_64 xz-devel-5.4.4-1.fc39.x86_64 zlib-devel-1.2.13-4.fc39.x86_64 zziplib-0.13.72-5.fc39.x86_64 Complete! Finish: build setup for R-rtracklayer-1.56.1-4.fc40.src.rpm Start: rpmbuild R-rtracklayer-1.56.1-4.fc40.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1689724800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.GtRPh4 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf rtracklayer + /usr/bin/mkdir -p rtracklayer + cd rtracklayer + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/rtracklayer_1.56.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/rtracklayer-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/rtracklayer-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i -e 's|zlibbioc,||' rtracklayer/DESCRIPTION + sed -i -e 's|import(zlibbioc)||' rtracklayer/NAMESPACE + cp /builddir/build/SOURCES/rtracklayer_jimkent_license.txt . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.fKAQGr + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd rtracklayer + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Vpl8u6 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64 ++ dirname /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd rtracklayer + mkdir -p /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64/usr/lib64/R/library + /usr/bin/R CMD INSTALL rtracklayer -l /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64/usr/lib64/R/library * installing *source* package ‘rtracklayer’ ... ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for OPENSSL... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc (GCC) 13.2.1 20230918 (Red Hat 13.2.1-3)’ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c S4Vectors_stubs.c -o S4Vectors_stubs.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c IRanges_stubs.c -o IRanges_stubs.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c XVector_stubs.c -o XVector_stubs.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_init_rtracklayer.c -o R_init_rtracklayer.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c readGFF.c -o readGFF.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bbiHelper.c -o bbiHelper.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bigWig.c -o bigWig.o bigWig.c: In function ‘BWGFile_query’: bigWig.c:268:11: warning: ‘ans_nhits’ may be used uninitialized [-Wmaybe-uninitialized] 268 | INTEGER(ans_nhits)[i] = nqhits; | ^~~~~~~~~~~~~~~~~~ bigWig.c:231:58: note: ‘ans_nhits’ was declared here 231 | SEXP ans, ans_start, ans_width, ans_score, ans_ranges, ans_nhits; | ^~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bigBedHelper.c -o bigBedHelper.o In file included from /usr/include/string.h:548, from ucsc/common.h:33, from bigBedHelper.h:5, from bigBedHelper.c:1: In function ‘strncpy’, inlined from ‘bbNamedFileChunkKey’ at bigBedHelper.c:148:3: /usr/include/bits/string_fortified.h:95:10: warning: ‘strncpy’ destination unchanged after copying no bytes [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bigBed.c -o bigBed.o bigBed.c: In function ‘BBDFile_write’: bigBed.c:338:10: warning: variable ‘extraIndexListEndOffset’ set but not used [-Wunused-but-set-variable] 338 | bits64 extraIndexListEndOffset = 0; | ^~~~~~~~~~~~~~~~~~~~~~~ bigBed.c: In function ‘BBDFile_query’: bigBed.c:195:7: warning: ‘name’ may be used uninitialized [-Wmaybe-uninitialized] 195 | SET_STRING_ELT(name, i, mkChar(bed->name)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bigBed.c:74:54: note: ‘name’ was declared here 74 | SEXP ans, n_qhits, ranges, chromStart, chromWidth, name, score, | ^~~~ bigBed.c:198:7: warning: ‘score’ may be used uninitialized [-Wmaybe-uninitialized] 198 | INTEGER(score)[i] = bed->score; | ^~~~~~~~~~~~~~ bigBed.c:74:60: note: ‘score’ was declared here 74 | SEXP ans, n_qhits, ranges, chromStart, chromWidth, name, score, | ^~~~~ bigBed.c:205:7: warning: ‘thickStart’ may be used uninitialized [-Wmaybe-uninitialized] 205 | INTEGER(thickStart)[i] = bed->thickStart; | ^~~~~~~~~~~~~~~~~~~ bigBed.c:75:26: note: ‘thickStart’ was declared here 75 | strand = R_NilValue, thickStart, thickWidth, itemRgb, blocks, | ^~~~~~~~~~ bigBed.c:204:7: warning: ‘thickWidth’ may be used uninitialized [-Wmaybe-uninitialized] 204 | INTEGER(thickWidth)[i] = bed->thickEnd - bed->thickStart + 1; | ^~~~~~~~~~~~~~~~~~~ bigBed.c:75:38: note: ‘thickWidth’ was declared here 75 | strand = R_NilValue, thickStart, thickWidth, itemRgb, blocks, | ^~~~~~~~~~ bigBed.c:209:7: warning: ‘itemRgb’ may be used uninitialized [-Wmaybe-uninitialized] 209 | SET_STRING_ELT(itemRgb, i, mkChar(rgbBuf)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bigBed.c:75:50: note: ‘itemRgb’ was declared here 75 | strand = R_NilValue, thickStart, thickWidth, itemRgb, blocks, | ^~~~~~~ bigBed.c:218:7: warning: ‘blocks’ may be used uninitialized [-Wmaybe-uninitialized] 218 | SET_VECTOR_ELT(blocks, i, new_IRanges("IRanges", bstart, bwidth, R_NilValue)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bigBed.c:75:59: note: ‘blocks’ was declared here 75 | strand = R_NilValue, thickStart, thickWidth, itemRgb, blocks, | ^~~~~~ bigBed.c:236:13: warning: ‘lengthIndex’ may be used uninitialized [-Wmaybe-uninitialized] 236 | INTEGER(lengthIndex)[efIndex] = index + 1; | ^~~~~~~~~~~~~~~~~~~~ bigBed.c:76:31: note: ‘lengthIndex’ was declared here 76 | extraFields = R_NilValue, lengthIndex; | ^~~~~~~~~~~ bigBed.c:226:22: warning: ‘typeId’ may be used uninitialized [-Wmaybe-uninitialized] 226 | switch(typeId[efIndex]) { | ^ bigBed.c:141:13: note: ‘typeId’ was declared here 141 | SEXPTYPE *typeId; | ^~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chain_io.c -o chain_io.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c twoBit.c -o twoBit.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c handlers.c -o handlers.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c utils.c -o utils.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/memgfx.c -o ucsc/memgfx.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/aliType.c -o ucsc/aliType.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/binRange.c -o ucsc/binRange.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/htmlColor.c -o ucsc/htmlColor.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/sqlList.c -o ucsc/sqlList.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/tokenizer.c -o ucsc/tokenizer.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/asParse.c -o ucsc/asParse.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/basicBed.c -o ucsc/basicBed.o ucsc/basicBed.c: In function ‘bedParseRgb’: ucsc/basicBed.c:997:1: warning: ‘strncpy’ specified bound 64 equals destination size [-Wstringop-truncation] 997 | strncpy(dupe, itemRgb, sizeof(dupe)); | ^ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/bigBed.c -o ucsc/bigBed.o ucsc/bigBed.c: In function ‘extractField’: ucsc/bigBed.c:314:52: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 314 | warn("Not enough fields in extractField of %s", line); | ^~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/bPlusTree.c -o ucsc/bPlusTree.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/bbiRead.c -o ucsc/bbiRead.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/bbiWrite.c -o ucsc/bbiWrite.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/bwgCreate.c -o ucsc/bwgCreate.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/bwgQuery.c -o ucsc/bwgQuery.o ucsc/bwgQuery.c: In function ‘bigWigIntervalQuery’: ucsc/bwgQuery.c:187:25: warning: variable ‘blockEnd’ set but not used [-Wunused-but-set-variable] 187 | char *blockPt, *blockEnd; | ^~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/cirTree.c -o ucsc/cirTree.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/common.c -o ucsc/common.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/dnaseq.c -o ucsc/dnaseq.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/dnautil.c -o ucsc/dnautil.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/errAbort.c -o ucsc/errAbort.o ucsc/errAbort.c: In function ‘getThreadVars’: ucsc/errAbort.c:331:5: warning: ignoring return value of ‘write’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 331 | write(STDERR_FILENO, errMsg, strlen(errMsg)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/hash.c -o ucsc/hash.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/linefile.c -o ucsc/linefile.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/localmem.c -o ucsc/localmem.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/sqlNum.c -o ucsc/sqlNum.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/zlibFace.c -o ucsc/zlibFace.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/dystring.c -o ucsc/dystring.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/hmmstats.c -o ucsc/hmmstats.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/obscure.c -o ucsc/obscure.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/pipeline.c -o ucsc/pipeline.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/rangeTree.c -o ucsc/rangeTree.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/rbTree.c -o ucsc/rbTree.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/memalloc.c -o ucsc/memalloc.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/dlist.c -o ucsc/dlist.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/hex.c -o ucsc/hex.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/filePath.c -o ucsc/filePath.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/htmlPage.c -o ucsc/htmlPage.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/udc.c -o ucsc/udc.o In file included from ucsc/udc.c:41: ucsc/net.h:178:1: warning: "/*" within comment [-Wcomment] 178 | /* Use byteRange as a work-around alternate method to get file size (content-length). | ucsc/udc.c: In function ‘djb2_hash’: ucsc/udc.c:1088:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 1088 | while (c = *str++) | ^ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/net.c -o ucsc/net.o In file included from ucsc/net.c:19: ucsc/net.h:178:1: warning: "/*" within comment [-Wcomment] 178 | /* Use byteRange as a work-around alternate method to get file size (content-length). | ucsc/net.c: In function ‘netConnectWithTimeout’: ucsc/net.c:148:38: warning: passing argument 3 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict] 148 | res = select(sd+1, NULL, &mySet, &mySet, &tempTime); | ^~~~~~ ~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/bits.c -o ucsc/bits.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/twoBit.c -o ucsc/twoBit.o In file included from ucsc/twoBit.c:15: ucsc/net.h:178:1: warning: "/*" within comment [-Wcomment] 178 | /* Use byteRange as a work-around alternate method to get file size (content-length). | gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/_cheapcgi.c -o ucsc/_cheapcgi.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/internet.c -o ucsc/internet.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/https.c -o ucsc/https.o In file included from ucsc/https.c:17: ucsc/net.h:178:1: warning: "/*" within comment [-Wcomment] 178 | /* Use byteRange as a work-around alternate method to get file size (content-length). | ucsc/https.c: In function ‘openSslInit’: ucsc/https.c:76:5: warning: ‘ERR_load_SSL_strings’ is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations] 76 | ERR_load_SSL_strings(); | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/openssl/sslerr.h:17, from /usr/include/openssl/ssl.h:43, from ucsc/https.c:8: /usr/include/openssl/sslerr_legacy.h:29:27: note: declared here 29 | OSSL_DEPRECATEDIN_3_0 int ERR_load_SSL_strings(void); | ^~~~~~~~~~~~~~~~~~~~ ucsc/https.c: At top level: ucsc/https.c:27:13: warning: ‘openssl_locking_callback’ defined but not used [-Wunused-function] 27 | static void openssl_locking_callback(int mode, int n, const char * file, int line) | ^~~~~~~~~~~~~~~~~~~~~~~~ ucsc/https.c:22:22: warning: ‘openssl_id_callback’ defined but not used [-Wunused-function] 22 | static unsigned long openssl_id_callback(void) | ^~~~~~~~~~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/base64.c -o ucsc/base64.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/verbose.c -o ucsc/verbose.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/os.c -o ucsc/os.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/wildcmp.c -o ucsc/wildcmp.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ucsc/_portimpl.c -o ucsc/_portimpl.o gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o rtracklayer.so S4Vectors_stubs.o IRanges_stubs.o XVector_stubs.o R_init_rtracklayer.o readGFF.o bbiHelper.o bigWig.o bigBedHelper.o bigBed.o chain_io.o twoBit.o handlers.o utils.o ucsc/memgfx.o ucsc/aliType.o ucsc/binRange.o ucsc/htmlColor.o ucsc/sqlList.o ucsc/tokenizer.o ucsc/asParse.o ucsc/basicBed.o ucsc/bigBed.o ucsc/bPlusTree.o ucsc/bbiRead.o ucsc/bbiWrite.o ucsc/bwgCreate.o ucsc/bwgQuery.o ucsc/cirTree.o ucsc/common.o ucsc/dnaseq.o ucsc/dnautil.o ucsc/errAbort.o ucsc/hash.o ucsc/linefile.o ucsc/localmem.o ucsc/sqlNum.o ucsc/zlibFace.o ucsc/dystring.o ucsc/hmmstats.o ucsc/obscure.o ucsc/pipeline.o ucsc/rangeTree.o ucsc/rbTree.o ucsc/memalloc.o ucsc/dlist.o ucsc/hex.o ucsc/filePath.o ucsc/htmlPage.o ucsc/udc.o ucsc/net.o ucsc/bits.o ucsc/twoBit.o ucsc/_cheapcgi.o ucsc/internet.o ucsc/https.o ucsc/base64.o ucsc/verbose.o ucsc/os.o ucsc/wildcmp.o ucsc/_portimpl.o -lz -pthread -lssl -lcrypto -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64/usr/lib64/R/library/00LOCK-rtracklayer/00new/rtracklayer/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘offset’ from package ‘stats’ in package ‘rtracklayer’ ** help *** installing help indices converting help for package ‘rtracklayer’ finding HTML links ... done BEDFile-class html BamFile-methods html Bed15TrackLine-class html BigBedFile html finding level-2 HTML links ... done BigBedSelection html BigWigFile html BigWigSelection-class html BrowserViewList-class html Chain-class html FastaFile-class html GFFFile-class html GRangesForUCSCGenome html GenomicData html GenomicSelection html IntegerRangesList-methods html Quickload-class html QuickloadGenome-class html TabixFile-methods html TrackDb-class html TrackHub-class html TrackHubGenome-class html TwoBitFile-class html UCSCData-class html UCSCFile-class html UCSCSchema-class html UCSCTableQuery-class html WIGFile-class html activeView-methods html asBED html asGFF html basicTrackLine-class html blocks-methods html browseGenome html browserSession-class html browserSession-methods html browserView-class html browserView-methods html browserViews-methods html cpneTrack html genomeBrowsers html laySequence-methods html layTrack-methods html liftOver html readGFF html targets html tracks-methods html ucscGenomes html ucscSession-class html ucscTrackLine-class html ucscTrackModes-class html ucscTrackModes-methods html ucscView-class html wigToBigWig html wigTrackLine-class html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rtracklayer) + test -d rtracklayer/src + cd rtracklayer/src + rm -f IRanges_stubs.o R_init_rtracklayer.o S4Vectors_stubs.o XVector_stubs.o bbiHelper.o bigBed.o bigBedHelper.o bigWig.o chain_io.o handlers.o readGFF.o twoBit.o utils.o rtracklayer.so + rm -rf /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64/usr/lib64/R/library/R.css + rm -rf /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64/usr/lib64/R/library/rtracklayer/tests/quickload/T_species_Oct_2011/bedGraphData.bw + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.56.1-4.fc40 --unique-debug-suffix -1.56.1-4.fc40.x86_64 --unique-debug-src-base R-rtracklayer-1.56.1-4.fc40.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/rtracklayer find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-rtracklayer-1.56.1-4.fc40.x86_64 2226 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.mW5vEn + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd rtracklayer + RPM_EC=0 ++ jobs -p Processing files: R-rtracklayer-1.56.1-4.fc40.x86_64 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.IWgQ4H + umask 022 + cd /builddir/build/BUILD + cd rtracklayer + LICENSEDIR=/builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64/usr/share/licenses/R-rtracklayer + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64/usr/share/licenses/R-rtracklayer + cp -pr /builddir/build/BUILD/rtracklayer/rtracklayer_jimkent_license.txt /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64/usr/share/licenses/R-rtracklayer + RPM_EC=0 ++ jobs -p + exit 0 Provides: R(rtracklayer) = 1.56.1 R-rtracklayer = 1.56.1-4.fc40 R-rtracklayer(x86-64) = 1.56.1-4.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.3 R(BiocGenerics) >= 0.35.3 R(BiocIO) R(Biostrings) >= 2.47.6 R(GenomeInfoDb) >= 1.15.2 R(GenomicAlignments) >= 1.15.6 R(GenomicRanges) >= 1.37.2 R(IRanges) >= 2.13.13 R(RCurl) >= 1.4.2 R(Rsamtools) >= 1.31.2 R(S4Vectors) >= 0.23.18 R(XML) >= 1.98.0 R(XVector) >= 0.19.7 R(methods) R(restfulr) >= 0.0.13 R(tools) R-core >= 3.5.0 libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.15)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.28)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libcrypto.so.3()(64bit) libcrypto.so.3(OPENSSL_3.0.0)(64bit) libssl.so.3()(64bit) libssl.so.3(OPENSSL_3.0.0)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Suggests: R(BSgenome) >= 1.33.4 R(RUnit) Processing files: R-rtracklayer-debugsource-1.56.1-4.fc40.x86_64 Provides: R-rtracklayer-debugsource = 1.56.1-4.fc40 R-rtracklayer-debugsource(x86-64) = 1.56.1-4.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-rtracklayer-debuginfo-1.56.1-4.fc40.x86_64 Provides: R-rtracklayer-debuginfo = 1.56.1-4.fc40 R-rtracklayer-debuginfo(x86-64) = 1.56.1-4.fc40 debuginfo(build-id) = 2bdc8b8fb1e5aff00167441d201dfdd084115208 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-rtracklayer-debugsource(x86-64) = 1.56.1-4.fc40 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64 Wrote: /builddir/build/RPMS/R-rtracklayer-debuginfo-1.56.1-4.fc40.x86_64.rpm Wrote: /builddir/build/RPMS/R-rtracklayer-debugsource-1.56.1-4.fc40.x86_64.rpm Wrote: /builddir/build/RPMS/R-rtracklayer-1.56.1-4.fc40.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.vYw4Id + umask 022 + cd /builddir/build/BUILD + cd rtracklayer + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-rtracklayer-1.56.1-4.fc40.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.dUsxbe + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/rtracklayer-SPECPARTS + rm -rf rtracklayer rtracklayer.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild R-rtracklayer-1.56.1-4.fc40.src.rpm Finish: build phase for R-rtracklayer-1.56.1-4.fc40.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1695238590.784434/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1695238590.784434/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1695238590.784434/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/R-rtracklayer-1.56.1-4.fc40.src.rpm) Config(child) 2 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-rtracklayer", "epoch": null, "version": "1.56.1", "release": "4.fc40", "arch": "src" }, { "name": "R-rtracklayer", "epoch": null, "version": "1.56.1", "release": "4.fc40", "arch": "x86_64" }, { "name": "R-rtracklayer-debugsource", "epoch": null, "version": "1.56.1", "release": "4.fc40", "arch": "x86_64" }, { "name": "R-rtracklayer-debuginfo", "epoch": null, "version": "1.56.1", "release": "4.fc40", "arch": "x86_64" } ] } RPMResults finished