Warning: Permanently added '98.94.60.59' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/9956658-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 1.6 PID: 77413 Logging PID: 77415 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 9956658, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '3bef18f4dcfa147586b2ee3ab26da96046bca9b8', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/siddhesh/mbp-gcc-16/nco', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'nco', 'package_version': '5.3.5-1', 'project_dirname': 'mbp-gcc-16', 'project_name': 'mbp-gcc-16', 'project_owner': 'siddhesh', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/siddhesh/mbp-gcc-16/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'https://kojipkgs.fedoraproject.org/repos/f44-build-side-124978/latest/$basearch/', 'id': 'https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch', 'name': 'Additional repo https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch'}], 'sandbox': 'siddhesh/mbp-gcc-16--siddhesh', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'siddhesh', 'tags': [], 'task_id': '9956658-fedora-rawhide-x86_64', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/siddhesh/mbp-gcc-16/nco /var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/siddhesh/mbp-gcc-16/nco', '/var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco'... Running: git checkout 3bef18f4dcfa147586b2ee3ab26da96046bca9b8 -- cmd: ['git', 'checkout', '3bef18f4dcfa147586b2ee3ab26da96046bca9b8', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco rc: 0 stdout: stderr: Note: switching to '3bef18f4dcfa147586b2ee3ab26da96046bca9b8'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 3bef18f automatic import of nco Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading nco-5.3.5.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o nco-5.3.5.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/siddhesh/mbp-gcc-16/nco/nco-5.3.5.tar.gz/md5/27f1206fe41c4fbbc023aeed4ebbb49c/nco-5.3.5.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 6721k 100 6721k 0 0 15.2M 0 --:--:-- --:--:-- --:--:-- 15.3M INFO: Reading stdout from command: md5sum nco-5.3.5.tar.gz tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco/nco.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1767063830.861866 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.6 starting (python version = 3.13.7, NVR = mock-6.6-1.fc42), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco/nco.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1767063830.861866 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco/nco.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.6 INFO: Mock Version: 6.6 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1767063830.861866/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Tagging container image as mock-bootstrap-712aff73-2539-46d2-a744-c90025f42d2f INFO: Checking that 9ff482f4f7f7693c5a78170426a8e50d75089789bb28676174c922f0ca44a475 image matches host's architecture INFO: Copy content of container 9ff482f4f7f7693c5a78170426a8e50d75089789bb28676174c922f0ca44a475 to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1767063830.861866/root INFO: mounting 9ff482f4f7f7693c5a78170426a8e50d75089789bb28676174c922f0ca44a475 with podman image mount INFO: image 9ff482f4f7f7693c5a78170426a8e50d75089789bb28676174c922f0ca44a475 as /var/lib/containers/storage/overlay/5f8a4f016c15032fb6d9e1fe2849f0952e6cdb3c541438001d8a85a725a39773/merged INFO: umounting image 9ff482f4f7f7693c5a78170426a8e50d75089789bb28676174c922f0ca44a475 (/var/lib/containers/storage/overlay/5f8a4f016c15032fb6d9e1fe2849f0952e6cdb3c541438001d8a85a725a39773/merged) with podman image umount INFO: Removing image mock-bootstrap-712aff73-2539-46d2-a744-c90025f42d2f INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1767063830.861866/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.1-1.fc44.x86_64 rpm-sequoia-1.10.0-1.fc44.x86_64 dnf5-5.3.0.0-3.fc44.x86_64 dnf5-plugins-5.3.0.0-3.fc44.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: Additional repo https_kojipkgs_fedorap 100% | 59.2 KiB/s | 3.5 KiB | 00m00s Copr repository 100% | 26.1 KiB/s | 1.5 KiB | 00m00s fedora 100% | 73.4 KiB/s | 24.5 KiB | 00m00s Repositories loaded. 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https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 506.2 KiB Installing groups: Buildsystem building group Transaction Summary: Installing: 183 packages Total size of inbound packages is 67 MiB. Need to download 0 B. After this operation, 220 MiB extra will be used (install 220 MiB, remove 0 B). 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Importing OpenPGP key 0x6D9F90A6: UserID : "Fedora (44) " Fingerprint: 36F612DCF27F7D1A48A835E4DBFCF71C6D9F90A6 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-44-primary The key was successfully imported. Importing OpenPGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. Importing OpenPGP key 0xF577861E: UserID : "Fedora (45) " Fingerprint: 4F50A6114CD5C6976A7F1179655A4B02F577861E From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-45-primary The key was successfully imported. [ 1/185] Verify package files 100% | 690.0 B/s | 183.0 B | 00m00s >>> Running %pretrans scriptlet: filesystem-0:3.18-51.fc44.x86_64 >>> Finished %pretrans scriptlet: filesystem-0:3.18-51.fc44.x86_64 >>> [RPM] /var/lib/mock/fedora-rawhide-x86_64-1767063830.861866/root/var/cache/dnf/copr_base-a2b79860a4d039f2/packages/bzip2-1.0.8-21.fc44.x86_64.rpm: Header OpenPGP V4 RSA/SHA256 signature, key ID 52ac7d71d4a9769d: NOKEY [ 2/185] Prepare transaction 100% | 3.4 KiB/s | 183.0 B | 00m00s [ 3/185] Installing libgcc-0:16.0.0-0. 100% | 266.0 MiB/s | 272.4 KiB | 00m00s [ 4/185] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/185] Installing publicsuffix-list- 100% | 0.0 B/s | 69.8 KiB | 00m00s [ 6/185] Installing fedora-release-ide 100% | 0.0 B/s | 920.0 B | 00m00s [ 7/185] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/185] Installing fedora-gpg-keys-0: 100% | 43.7 MiB/s | 179.0 KiB | 00m00s [ 9/185] Installing fedora-repos-0:44- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/185] Installing fedora-release-com 100% | 24.3 MiB/s | 24.9 KiB | 00m00s [ 11/185] Installing fedora-release-0:4 100% | 17.3 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.0-27.fc44.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-27.fc44.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 12/185] Installing setup-0:2.15.0-27. 100% | 51.0 MiB/s | 730.6 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/185] Installing filesystem-0:3.18- 100% | 2.8 MiB/s | 212.8 KiB | 00m00s [ 14/185] Installing gnulib-l10n-0:2024 100% | 215.5 MiB/s | 661.9 KiB | 00m00s [ 15/185] Installing coreutils-common-0 100% | 374.3 MiB/s | 11.2 MiB | 00m00s [ 16/185] Installing ncurses-base-0:6.5 100% | 86.3 MiB/s | 353.5 KiB | 00m00s [ 17/185] Installing bash-0:5.3.0-2.fc4 100% | 273.4 MiB/s | 8.5 MiB | 00m00s [ 18/185] Installing glibc-common-0:2.4 100% | 60.3 MiB/s | 1.0 MiB | 00m00s [ 19/185] Installing glibc-gconv-extra- 100% | 269.9 MiB/s | 7.3 MiB | 00m00s [ 20/185] Installing glibc-0:2.42.9000- 100% | 185.1 MiB/s | 6.8 MiB | 00m00s [ 21/185] Installing ncurses-libs-0:6.5 100% | 232.7 MiB/s | 953.0 KiB | 00m00s [ 22/185] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 23/185] Installing zlib-ng-compat-0:2 100% | 158.6 MiB/s | 162.4 KiB | 00m00s [ 24/185] Installing bzip2-libs-0:1.0.8 100% | 79.7 MiB/s | 81.6 KiB | 00m00s [ 25/185] Installing libgpg-error-0:1.5 100% | 66.1 MiB/s | 947.5 KiB | 00m00s [ 26/185] Installing libassuan-0:2.5.7- 100% | 161.8 MiB/s | 165.7 KiB | 00m00s [ 27/185] Installing libgcrypt-0:1.11.2 100% | 394.0 MiB/s | 1.6 MiB | 00m00s [ 28/185] Installing readline-0:8.3-2.f 100% | 250.9 MiB/s | 513.9 KiB | 00m00s [ 29/185] Installing gmp-1:6.3.0-4.fc44 100% | 399.2 MiB/s | 817.5 KiB | 00m00s [ 30/185] Installing xz-libs-1:5.8.1-4. 100% | 213.8 MiB/s | 218.9 KiB | 00m00s [ 31/185] Installing libuuid-0:2.41.3-8 100% | 0.0 B/s | 38.2 KiB | 00m00s [ 32/185] Installing popt-0:1.19-9.fc43 100% | 68.1 MiB/s | 139.4 KiB | 00m00s [ 33/185] Installing libzstd-0:1.5.7-3. 100% | 306.5 MiB/s | 941.6 KiB | 00m00s [ 34/185] Installing elfutils-libelf-0: 100% | 373.7 MiB/s | 1.1 MiB | 00m00s [ 35/185] Installing npth-0:1.8-3.fc43. 100% | 0.0 B/s | 50.7 KiB | 00m00s [ 36/185] Installing libblkid-0:2.41.3- 100% | 257.2 MiB/s | 263.4 KiB | 00m00s [ 37/185] Installing systemd-libs-0:259 100% | 334.3 MiB/s | 2.3 MiB | 00m00s [ 38/185] Installing libxcrypt-0:4.5.2- 100% | 281.3 MiB/s | 288.0 KiB | 00m00s [ 39/185] Installing libsepol-0:3.9-2.f 100% | 421.3 MiB/s | 862.8 KiB | 00m00s [ 40/185] Installing sqlite-libs-0:3.51 100% | 383.0 MiB/s | 1.5 MiB | 00m00s [ 41/185] Installing gnupg2-gpgconf-0:2 100% | 20.5 MiB/s | 251.8 KiB | 00m00s [ 42/185] Installing libattr-0:2.5.2-6. 100% | 0.0 B/s | 25.4 KiB | 00m00s [ 43/185] Installing libacl-0:2.3.2-4.f 100% | 0.0 B/s | 36.6 KiB | 00m00s [ 44/185] Installing libtasn1-0:4.20.0- 100% | 173.8 MiB/s | 178.0 KiB | 00m00s [ 45/185] Installing libunistring-0:1.1 100% | 346.9 MiB/s | 1.7 MiB | 00m00s [ 46/185] Installing libidn2-0:2.3.8-2. 100% | 54.9 MiB/s | 562.6 KiB | 00m00s [ 47/185] Installing crypto-policies-0: 100% | 38.5 MiB/s | 157.7 KiB | 00m00s [ 48/185] Installing gnupg2-verify-0:2. 100% | 25.2 MiB/s | 361.7 KiB | 00m00s [ 49/185] Installing dwz-0:0.16-2.fc44. 100% | 23.8 MiB/s | 292.3 KiB | 00m00s [ 50/185] Installing mpfr-0:4.2.2-2.fc4 100% | 276.9 MiB/s | 850.8 KiB | 00m00s [ 51/185] Installing gawk-0:5.3.2-2.fc4 100% | 102.1 MiB/s | 1.8 MiB | 00m00s [ 52/185] Installing libksba-0:1.6.7-4. 100% | 203.6 MiB/s | 416.9 KiB | 00m00s [ 53/185] Installing unzip-0:6.0-68.fc4 100% | 32.1 MiB/s | 393.8 KiB | 00m00s [ 54/185] Installing file-libs-0:5.46-8 100% | 624.1 MiB/s | 11.9 MiB | 00m00s [ 55/185] Installing file-0:5.46-8.fc44 100% | 7.6 MiB/s | 101.7 KiB | 00m00s [ 56/185] Installing diffutils-0:3.12-3 100% | 92.5 MiB/s | 1.6 MiB | 00m00s [ 57/185] Installing libcap-ng-0:0.8.5- 100% | 69.2 MiB/s | 70.8 KiB | 00m00s [ 58/185] Installing audit-libs-0:4.1.2 100% | 186.3 MiB/s | 381.5 KiB | 00m00s [ 59/185] Installing libsmartcols-0:2.4 100% | 177.1 MiB/s | 181.4 KiB | 00m00s [ 60/185] Installing libeconf-0:0.7.9-2 100% | 64.9 MiB/s | 66.4 KiB | 00m00s [ 61/185] Installing pam-libs-0:1.7.1-3 100% | 126.0 MiB/s | 129.0 KiB | 00m00s [ 62/185] Installing libcap-0:2.77-1.fc 100% | 17.4 MiB/s | 214.3 KiB | 00m00s [ 63/185] Installing alternatives-0:1.3 100% | 5.7 MiB/s | 63.8 KiB | 00m00s [ 64/185] Installing lua-libs-0:5.4.8-4 100% | 276.7 MiB/s | 283.3 KiB | 00m00s [ 65/185] Installing json-c-0:0.18-7.fc 100% | 81.9 MiB/s | 83.9 KiB | 00m00s [ 66/185] Installing libffi-0:3.5.2-1.f 100% | 83.2 MiB/s | 85.2 KiB | 00m00s [ 67/185] Installing p11-kit-0:0.25.8-1 100% | 127.2 MiB/s | 2.3 MiB | 00m00s [ 68/185] Installing p11-kit-trust-0:0. 100% | 20.8 MiB/s | 448.3 KiB | 00m00s [ 69/185] Installing ngtcp2-0:1.18.0-1. 100% | 308.4 MiB/s | 315.8 KiB | 00m00s [ 70/185] Installing zip-0:3.0-44.fc43. 100% | 48.7 MiB/s | 698.4 KiB | 00m00s [ 71/185] Installing gnupg2-keyboxd-0:2 100% | 28.2 MiB/s | 202.5 KiB | 00m00s [ 72/185] Installing libpsl-0:0.21.5-6. 100% | 75.6 MiB/s | 77.4 KiB | 00m00s [ 73/185] Installing liblastlog2-0:2.41 100% | 5.8 MiB/s | 35.8 KiB | 00m00s [ 74/185] Installing systemd-standalone 100% | 20.5 MiB/s | 294.2 KiB | 00m00s [ 75/185] Installing libusb1-0:1.0.29-4 100% | 168.9 MiB/s | 172.9 KiB | 00m00s [ 76/185] Installing libfdisk-0:2.41.3- 100% | 372.4 MiB/s | 381.3 KiB | 00m00s [ 77/185] Installing libxml2-0:2.12.10- 100% | 100.3 MiB/s | 1.7 MiB | 00m00s [ 78/185] Installing nettle-0:3.10.1-2. 100% | 258.4 MiB/s | 793.7 KiB | 00m00s [ 79/185] Installing gnutls-0:3.8.11-8. 100% | 339.5 MiB/s | 3.7 MiB | 00m00s [ 80/185] Installing bzip2-0:1.0.8-21.f 100% | 7.5 MiB/s | 99.5 KiB | 00m00s [ 81/185] Installing add-determinism-0: 100% | 128.0 MiB/s | 2.3 MiB | 00m00s [ 82/185] Installing cpio-0:2.15-6.fc44 100% | 73.6 MiB/s | 1.1 MiB | 00m00s [ 83/185] Installing libpkgconf-0:2.3.0 100% | 77.4 MiB/s | 79.2 KiB | 00m00s [ 84/185] Installing pkgconf-0:2.3.0-3. 100% | 7.4 MiB/s | 91.0 KiB | 00m00s [ 85/185] Installing ed-0:1.22.3-1.fc44 100% | 12.3 MiB/s | 151.2 KiB | 00m00s [ 86/185] Installing patch-0:2.8-3.fc44 100% | 18.6 MiB/s | 228.2 KiB | 00m00s [ 87/185] Installing libatomic-0:16.0.0 100% | 0.0 B/s | 37.5 KiB | 00m00s [ 88/185] Installing libstdc++-0:16.0.0 100% | 364.8 MiB/s | 2.9 MiB | 00m00s [ 89/185] Installing zstd-0:1.5.7-3.fc4 100% | 35.6 MiB/s | 509.8 KiB | 00m00s [ 90/185] Installing lz4-libs-0:1.10.0- 100% | 154.6 MiB/s | 158.4 KiB | 00m00s [ 91/185] Installing jansson-0:2.14-3.f 100% | 88.2 MiB/s | 90.3 KiB | 00m00s [ 92/185] Installing libgomp-0:16.0.0-0 100% | 279.4 MiB/s | 572.3 KiB | 00m00s [ 93/185] Installing libtool-ltdl-0:2.5 100% | 69.5 MiB/s | 71.1 KiB | 00m00s [ 94/185] Installing gdbm-libs-1:1.23-1 100% | 128.1 MiB/s | 131.2 KiB | 00m00s [ 95/185] Installing cyrus-sasl-lib-0:2 100% | 127.8 MiB/s | 2.3 MiB | 00m00s [ 96/185] Installing xxhash-libs-0:0.8. 100% | 89.4 MiB/s | 91.6 KiB | 00m00s [ 97/185] Installing libbrotli-0:1.2.0- 100% | 282.4 MiB/s | 867.7 KiB | 00m00s [ 98/185] Installing libnghttp2-0:1.68. 100% | 159.5 MiB/s | 163.4 KiB | 00m00s [ 99/185] Installing libnghttp3-0:1.14. 100% | 152.9 MiB/s | 156.6 KiB | 00m00s [100/185] Installing keyutils-libs-0:1. 100% | 54.3 MiB/s | 55.6 KiB | 00m00s [101/185] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 64.2 KiB | 00m00s [102/185] Installing libverto-0:0.3.2-1 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [103/185] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [104/185] Installing elfutils-default-y 100% | 340.5 KiB/s | 2.0 KiB | 00m00s [105/185] Installing elfutils-libs-0:0. 100% | 224.4 MiB/s | 689.3 KiB | 00m00s [106/185] Installing pcre2-syntax-0:10. 100% | 277.7 MiB/s | 284.3 KiB | 00m00s [107/185] Installing pcre2-0:10.47-1.fc 100% | 343.8 MiB/s | 704.1 KiB | 00m00s [108/185] Installing libselinux-0:3.9-5 100% | 189.8 MiB/s | 194.4 KiB | 00m00s [109/185] Installing grep-0:3.12-2.fc44 100% | 59.0 MiB/s | 1.0 MiB | 00m00s [110/185] Installing sed-0:4.9-6.fc44.x 100% | 56.3 MiB/s | 865.5 KiB | 00m00s [111/185] Installing findutils-1:4.10.0 100% | 110.0 MiB/s | 1.9 MiB | 00m00s [112/185] Installing xz-1:5.8.1-4.fc44. 100% | 78.3 MiB/s | 1.3 MiB | 00m00s [113/185] Installing libmount-0:2.41.3- 100% | 182.4 MiB/s | 373.6 KiB | 00m00s [114/185] Installing libsemanage-0:3.9- 100% | 151.5 MiB/s | 310.2 KiB | 00m00s [115/185] Installing util-linux-core-0: 100% | 86.8 MiB/s | 1.5 MiB | 00m00s [116/185] Installing openssl-libs-1:3.5 100% | 387.4 MiB/s | 8.9 MiB | 00m00s [117/185] Installing coreutils-0:9.9-1. 100% | 161.4 MiB/s | 5.5 MiB | 00m00s [118/185] Installing ca-certificates-0: 100% | 2.1 MiB/s | 2.5 MiB | 00m01s [119/185] Installing libarchive-0:3.8.4 100% | 311.6 MiB/s | 957.2 KiB | 00m00s [120/185] Installing krb5-libs-0:1.21.3 100% | 153.3 MiB/s | 2.3 MiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.x86_64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.x86_64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [121/185] Installing tpm2-tss-0:4.1.3-8 100% | 262.0 MiB/s | 1.6 MiB | 00m00s [122/185] Installing gnupg2-gpg-agent-0 100% | 32.1 MiB/s | 690.5 KiB | 00m00s [123/185] Installing ima-evm-utils-libs 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [124/185] Installing libssh-0:0.11.3-1. 100% | 185.3 MiB/s | 569.2 KiB | 00m00s [125/185] Installing util-linux-0:2.41. 100% | 101.8 MiB/s | 3.6 MiB | 00m00s [126/185] Installing gzip-0:1.14-1.fc44 100% | 30.3 MiB/s | 403.3 KiB | 00m00s [127/185] Installing rpm-sequoia-0:1.10 100% | 352.3 MiB/s | 2.5 MiB | 00m00s [128/185] Installing rpm-libs-0:6.0.1-1 100% | 304.5 MiB/s | 935.3 KiB | 00m00s [129/185] Installing libfsverity-0:1.6- 100% | 28.7 MiB/s | 29.4 KiB | 00m00s [130/185] Installing libevent-0:2.1.12- 100% | 319.8 MiB/s | 982.4 KiB | 00m00s [131/185] Installing openldap-0:2.6.10- 100% | 324.0 MiB/s | 663.6 KiB | 00m00s [132/185] Installing gnupg2-dirmngr-0:2 100% | 31.1 MiB/s | 636.6 KiB | 00m00s [133/185] Installing gnupg2-0:2.4.8-4.f 100% | 216.4 MiB/s | 6.5 MiB | 00m00s [134/185] Installing rpm-sign-libs-0:6. 100% | 39.6 MiB/s | 40.6 KiB | 00m00s [135/185] Installing rpm-build-libs-0:6 100% | 259.0 MiB/s | 265.2 KiB | 00m00s [136/185] Installing gpgverify-0:2.2-3. 100% | 0.0 B/s | 9.4 KiB | 00m00s [137/185] Installing ngtcp2-crypto-ossl 100% | 0.0 B/s | 52.6 KiB | 00m00s [138/185] Installing libcurl-0:8.18.0~r 100% | 320.9 MiB/s | 985.8 KiB | 00m00s [139/185] Installing elfutils-debuginfo 100% | 6.5 MiB/s | 86.3 KiB | 00m00s [140/185] Installing binutils-0:2.45.50 100% | 322.9 MiB/s | 27.4 MiB | 00m00s [141/185] Installing elfutils-0:0.194-2 100% | 154.2 MiB/s | 2.9 MiB | 00m00s [142/185] Installing gdb-minimal-0:16.3 100% | 288.2 MiB/s | 13.3 MiB | 00m00s [143/185] Installing debugedit-0:5.2-3. 100% | 17.7 MiB/s | 217.3 KiB | 00m00s [144/185] Installing curl-0:8.18.0~rc2- 100% | 21.0 MiB/s | 474.1 KiB | 00m00s [145/185] Installing rpm-0:6.0.1-1.fc44 100% | 77.3 MiB/s | 2.6 MiB | 00m00s [146/185] Installing cmake-srpm-macros- 100% | 0.0 B/s | 804.0 B | 00m00s [147/185] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [148/185] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [149/185] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [150/185] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 9.3 KiB | 00m00s [151/185] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [152/185] Installing tar-2:1.35-6.fc43. 100% | 140.9 MiB/s | 3.0 MiB | 00m00s [153/185] Installing linkdupes-0:0.7.2- 100% | 58.6 MiB/s | 840.1 KiB | 00m00s [154/185] Installing libselinux-utils-0 100% | 22.6 MiB/s | 323.4 KiB | 00m00s [155/185] Installing policycoreutils-0: 100% | 26.7 MiB/s | 711.8 KiB | 00m00s [156/185] Installing selinux-policy-0:4 100% | 1.7 MiB/s | 33.6 KiB | 00m00s [157/185] Installing selinux-policy-tar 100% | 193.7 MiB/s | 14.9 MiB | 00m00s [158/185] Installing build-reproducibil 100% | 1.5 MiB/s | 1.5 KiB | 00m00s [159/185] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [160/185] Installing pkgconf-pkg-config 100% | 126.7 KiB/s | 1.8 KiB | 00m00s [161/185] Installing rust-srpm-macros-0 100% | 0.0 B/s | 6.4 KiB | 00m00s [162/185] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [163/185] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [164/185] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [165/185] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [166/185] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [167/185] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [168/185] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [169/185] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [170/185] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [171/185] Installing gap-srpm-macros-0: 100% | 0.0 B/s | 2.7 KiB | 00m00s [172/185] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [173/185] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [174/185] Installing rpm-build-0:6.0.1- 100% | 20.7 MiB/s | 296.6 KiB | 00m00s [175/185] Installing pyproject-srpm-mac 100% | 0.0 B/s | 2.5 KiB | 00m00s [176/185] Installing redhat-rpm-config- 100% | 185.4 MiB/s | 189.9 KiB | 00m00s [177/185] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [178/185] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [179/185] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 63.0 KiB | 00m00s [180/185] Installing R-srpm-macros-0:1. 100% | 0.0 B/s | 4.0 KiB | 00m00s [181/185] Installing python-srpm-macros 100% | 12.9 MiB/s | 52.9 KiB | 00m00s [182/185] Installing rpm-plugin-selinux 100% | 0.0 B/s | 13.0 KiB | 00m00s [183/185] Installing which-0:2.23-3.fc4 100% | 6.0 MiB/s | 85.7 KiB | 00m00s [184/185] Installing shadow-utils-2:4.1 100% | 137.0 MiB/s | 4.0 MiB | 00m00s [185/185] Installing info-0:7.2-7.fc44. 100% | 48.9 KiB/s | 358.3 KiB | 00m07s Warning: skipped OpenPGP checks for 178 packages from repositories: copr_base, https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: R-srpm-macros-1.3.0-1.fc44.noarch add-determinism-0.7.2-2.fc44.x86_64 alternatives-1.33-3.fc44.x86_64 ansible-srpm-macros-1-18.1.fc43.noarch audit-libs-4.1.2-2.fc44.x86_64 bash-5.3.0-2.fc44.x86_64 binutils-2.45.50-12.fc44.x86_64 build-reproducibility-srpm-macros-0.7.2-2.fc44.noarch bzip2-1.0.8-21.fc44.x86_64 bzip2-libs-1.0.8-21.fc44.x86_64 ca-certificates-2025.2.80_v9.0.304-2.fc44.noarch cmake-srpm-macros-3.31.10-3.fc44.noarch coreutils-9.9-1.fc44.x86_64 coreutils-common-9.9-1.fc44.x86_64 cpio-2.15-6.fc44.x86_64 crypto-policies-20251128-1.git19878fe.fc44.noarch curl-8.18.0~rc2-1.fc44.x86_64 cyrus-sasl-lib-2.1.28-33.fc44.x86_64 debugedit-5.2-3.fc44.x86_64 diffutils-3.12-3.fc44.x86_64 dwz-0.16-2.fc44.x86_64 ed-1.22.3-1.fc44.x86_64 efi-srpm-macros-6-5.fc44.noarch elfutils-0.194-2.fc44.x86_64 elfutils-debuginfod-client-0.194-2.fc44.x86_64 elfutils-default-yama-scope-0.194-2.fc44.noarch elfutils-libelf-0.194-2.fc44.x86_64 elfutils-libs-0.194-2.fc44.x86_64 fedora-gpg-keys-44-0.1.noarch fedora-release-44-0.10.noarch fedora-release-common-44-0.10.noarch fedora-release-identity-basic-44-0.10.noarch fedora-repos-44-0.1.noarch fedora-repos-rawhide-44-0.1.noarch file-5.46-8.fc44.x86_64 file-libs-5.46-8.fc44.x86_64 filesystem-3.18-51.fc44.x86_64 filesystem-srpm-macros-3.18-51.fc44.noarch findutils-4.10.0-6.fc44.x86_64 fonts-srpm-macros-5.0.0-1.fc44.noarch forge-srpm-macros-0.4.0-3.fc43.noarch fpc-srpm-macros-1.3-15.fc43.noarch gap-srpm-macros-2-1.fc44.noarch gawk-5.3.2-2.fc44.x86_64 gdb-minimal-16.3-6.fc44.x86_64 gdbm-libs-1.23-10.fc44.x86_64 ghc-srpm-macros-1.9.2-3.fc43.noarch glibc-2.42.9000-17.fc44.x86_64 glibc-common-2.42.9000-17.fc44.x86_64 glibc-gconv-extra-2.42.9000-17.fc44.x86_64 glibc-minimal-langpack-2.42.9000-17.fc44.x86_64 gmp-6.3.0-4.fc44.x86_64 gnat-srpm-macros-6-8.fc43.noarch gnulib-l10n-20241231-1.fc44.noarch gnupg2-2.4.8-4.fc44.x86_64 gnupg2-dirmngr-2.4.8-4.fc44.x86_64 gnupg2-gpg-agent-2.4.8-4.fc44.x86_64 gnupg2-gpgconf-2.4.8-4.fc44.x86_64 gnupg2-keyboxd-2.4.8-4.fc44.x86_64 gnupg2-verify-2.4.8-4.fc44.x86_64 gnutls-3.8.11-8.fc44.x86_64 go-srpm-macros-3.8.0-1.fc44.noarch gpg-pubkey-36f612dcf27f7d1a48a835e4dbfcf71c6d9f90a6-6786af3b gpg-pubkey-4f50a6114cd5c6976a7f1179655a4b02f577861e-6888bc98 gpg-pubkey-c6e7f081cf80e13146676e88829b606631645531-66b6dccf gpgverify-2.2-3.fc43.noarch grep-3.12-2.fc44.x86_64 gzip-1.14-1.fc44.x86_64 ima-evm-utils-libs-1.6.2-7.fc44.x86_64 info-7.2-7.fc44.x86_64 jansson-2.14-3.fc44.x86_64 java-srpm-macros-1-7.fc43.noarch json-c-0.18-7.fc44.x86_64 kernel-srpm-macros-1.0-27.fc43.noarch keyutils-libs-1.6.3-6.fc44.x86_64 krb5-libs-1.21.3-10.fc44.x86_64 libacl-2.3.2-4.fc44.x86_64 libarchive-3.8.4-1.fc44.x86_64 libassuan-2.5.7-4.fc44.x86_64 libatomic-16.0.0-0.3.fc44.x86_64 libattr-2.5.2-6.fc43.x86_64 libblkid-2.41.3-8.fc44.x86_64 libbrotli-1.2.0-1.fc44.x86_64 libcap-2.77-1.fc44.x86_64 libcap-ng-0.8.5-8.fc44.x86_64 libcom_err-1.47.3-3.fc44.x86_64 libcurl-8.18.0~rc2-1.fc44.x86_64 libeconf-0.7.9-2.fc44.x86_64 libevent-2.1.12-16.fc44.x86_64 libfdisk-2.41.3-8.fc44.x86_64 libffi-3.5.2-1.fc44.x86_64 libfsverity-1.6-3.fc44.x86_64 libgcc-16.0.0-0.3.fc44.x86_64 libgcrypt-1.11.2-1.fc44.x86_64 libgomp-16.0.0-0.3.fc44.x86_64 libgpg-error-1.58-1.fc44.x86_64 libidn2-2.3.8-2.fc44.x86_64 libksba-1.6.7-4.fc44.x86_64 liblastlog2-2.41.3-8.fc44.x86_64 libmount-2.41.3-8.fc44.x86_64 libnghttp2-1.68.0-2.fc44.x86_64 libnghttp3-1.14.0-1.fc44.x86_64 libpkgconf-2.3.0-3.fc43.x86_64 libpsl-0.21.5-6.fc44.x86_64 libselinux-3.9-5.fc44.x86_64 libselinux-utils-3.9-5.fc44.x86_64 libsemanage-3.9-4.fc44.x86_64 libsepol-3.9-2.fc44.x86_64 libsmartcols-2.41.3-8.fc44.x86_64 libssh-0.11.3-1.fc44.x86_64 libssh-config-0.11.3-1.fc44.noarch libstdc++-16.0.0-0.3.fc44.x86_64 libtasn1-4.20.0-2.fc44.x86_64 libtool-ltdl-2.5.4-9.fc44.x86_64 libunistring-1.1-10.fc44.x86_64 libusb1-1.0.29-4.fc44.x86_64 libuuid-2.41.3-8.fc44.x86_64 libverto-0.3.2-11.fc43.x86_64 libxcrypt-4.5.2-2.fc44.x86_64 libxml2-2.12.10-5.fc44.x86_64 libzstd-1.5.7-3.fc44.x86_64 linkdupes-0.7.2-2.fc44.x86_64 lua-libs-5.4.8-4.fc44.x86_64 lua-srpm-macros-1-16.fc43.noarch lz4-libs-1.10.0-3.fc44.x86_64 mpfr-4.2.2-2.fc44.x86_64 ncurses-base-6.5-8.20250614.fc44.noarch ncurses-libs-6.5-8.20250614.fc44.x86_64 nettle-3.10.1-2.fc43.x86_64 ngtcp2-1.18.0-1.fc44.x86_64 ngtcp2-crypto-ossl-1.18.0-1.fc44.x86_64 npth-1.8-3.fc43.x86_64 ocaml-srpm-macros-11-2.fc43.noarch openblas-srpm-macros-2-20.fc43.noarch openldap-2.6.10-4.fc44.x86_64 openssl-libs-3.5.4-1.fc44.x86_64 p11-kit-0.25.8-1.fc44.x86_64 p11-kit-trust-0.25.8-1.fc44.x86_64 package-notes-srpm-macros-0.5-14.fc43.noarch pam-libs-1.7.1-3.fc43.x86_64 patch-2.8-3.fc44.x86_64 pcre2-10.47-1.fc44.x86_64 pcre2-syntax-10.47-1.fc44.noarch perl-srpm-macros-1-60.fc43.noarch pkgconf-2.3.0-3.fc43.x86_64 pkgconf-m4-2.3.0-3.fc43.noarch pkgconf-pkg-config-2.3.0-3.fc43.x86_64 policycoreutils-3.9-5.fc44.x86_64 popt-1.19-9.fc43.x86_64 publicsuffix-list-dafsa-20250616-2.fc43.noarch pyproject-srpm-macros-1.18.6-1.fc44.noarch python-srpm-macros-3.14-9.fc44.noarch qt5-srpm-macros-5.15.18-1.fc44.noarch qt6-srpm-macros-6.10.1-1.fc44.noarch readline-8.3-2.fc43.x86_64 redhat-rpm-config-343-19.fc44.noarch rpm-6.0.1-1.fc44.x86_64 rpm-build-6.0.1-1.fc44.x86_64 rpm-build-libs-6.0.1-1.fc44.x86_64 rpm-libs-6.0.1-1.fc44.x86_64 rpm-plugin-selinux-6.0.1-1.fc44.x86_64 rpm-sequoia-1.10.0-1.fc44.x86_64 rpm-sign-libs-6.0.1-1.fc44.x86_64 rust-srpm-macros-28.4-1.fc44.noarch sed-4.9-6.fc44.x86_64 selinux-policy-42.19-1.fc44.noarch selinux-policy-targeted-42.19-1.fc44.noarch setup-2.15.0-27.fc44.noarch shadow-utils-4.18.0-7.fc44.x86_64 sqlite-libs-3.51.0-1.fc44.x86_64 systemd-libs-259-1.fc44.x86_64 systemd-standalone-sysusers-259-1.fc44.x86_64 tar-1.35-6.fc43.x86_64 tpm2-tss-4.1.3-8.fc43.x86_64 tree-sitter-srpm-macros-0.4.2-1.fc43.noarch unzip-6.0-68.fc44.x86_64 util-linux-2.41.3-8.fc44.x86_64 util-linux-core-2.41.3-8.fc44.x86_64 which-2.23-3.fc43.x86_64 xxhash-libs-0.8.3-3.fc43.x86_64 xz-5.8.1-4.fc44.x86_64 xz-libs-5.8.1-4.fc44.x86_64 zig-srpm-macros-1-5.fc43.noarch zip-3.0-44.fc43.x86_64 zlib-ng-compat-2.3.2-2.fc44.x86_64 zstd-1.5.7-3.fc44.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1758758400 Wrote: /builddir/build/SRPMS/nco-5.3.5-1.fc44.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1767063830.861866/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-1cmwm34z/nco/nco.spec) Config(child) 0 minutes 18 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/nco-5.3.5-1.fc44.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1767063830.861866/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1767063830.861866/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1767063830.861866/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.1-1.fc44.x86_64 rpm-sequoia-1.10.0-1.fc44.x86_64 dnf5-5.3.0.0-3.fc44.x86_64 dnf5-plugins-5.3.0.0-3.fc44.x86_64 Finish: chroot init Start: build phase for nco-5.3.5-1.fc44.src.rpm Start: build setup for nco-5.3.5-1.fc44.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1758758400 Wrote: /builddir/build/SRPMS/nco-5.3.5-1.fc44.src.rpm Updating and loading repositories: Additional repo https_kojipkgs_fedorap 100% | 64.7 KiB/s | 3.5 KiB | 00m00s Copr repository 100% | 28.5 KiB/s | 1.5 KiB | 00m00s fedora 100% | 209.4 KiB/s | 24.5 KiB | 00m00s Repositories loaded. Package "gawk-5.3.2-2.fc44.x86_64" is already installed. Package Arch Version Repository Size Installing: antlr-C++ x86_64 0:2.7.7-88.fc44 copr_base 11.1 MiB bison x86_64 0:3.8.2-11.fc44 copr_base 3.5 MiB chrpath x86_64 0:0.16-26.fc44 copr_base 58.3 KiB flex x86_64 0:2.6.4-20.fc44 copr_base 805.1 KiB gcc-c++ x86_64 0:16.0.0-0.3.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 48.3 MiB gsl-devel x86_64 0:2.8-2.fc44 copr_base 1.6 MiB make x86_64 1:4.4.1-11.fc44 copr_base 1.8 MiB netcdf-devel x86_64 0:4.9.3-1.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 397.7 KiB texinfo x86_64 0:7.2-7.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 7.3 MiB texinfo-tex x86_64 0:7.2-7.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 506.5 KiB udunits2-devel x86_64 0:2.2.28-12.fc43 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 50.8 KiB Installing dependencies: abattis-cantarell-vf-fonts noarch 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default-fonts-core-sans noarch 0:4.2-5.fc43 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 11.9 KiB expat x86_64 0:2.7.3-1.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 301.1 KiB fontconfig x86_64 0:2.17.0-3.fc44 copr_base 776.4 KiB fonts-filesystem noarch 1:5.0.0-1.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 0.0 B freetype x86_64 0:2.14.1-1.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 866.3 KiB gcc x86_64 0:16.0.0-0.3.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 126.0 MiB gcc-gfortran x86_64 0:16.0.0-0.3.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 46.2 MiB gcc-plugin-annobin x86_64 0:16.0.0-0.3.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 57.2 KiB glib2 x86_64 0:2.87.0-2.fc44 copr_base 15.0 MiB glibc-devel x86_64 0:2.42.9000-17.fc44 fedora 2.3 MiB google-noto-fonts-common noarch 0:20251201-1.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 17.7 KiB google-noto-sans-vf-fonts noarch 0:20251201-1.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 1.4 MiB graphite2 x86_64 0:1.3.14-19.fc44 copr_base 191.5 KiB groff-base x86_64 0:1.23.0-11.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 3.8 MiB gsl x86_64 0:2.8-2.fc44 copr_base 3.5 MiB harfbuzz x86_64 0:12.3.0-1.fc44 fedora 2.8 MiB hdf-libs x86_64 0:4.3.0-4.fc44 copr_base 706.8 KiB hdf5 x86_64 0:1.14.6-6.fc44 copr_base 6.5 MiB hdf5-devel x86_64 0:1.14.6-6.fc44 copr_base 3.3 MiB hostname x86_64 0:3.25-3.fc44 copr_base 41.3 KiB kernel-headers x86_64 0:6.19.0-0.rc2.20.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 6.9 MiB keyutils-libs-devel x86_64 0:1.6.3-6.fc44 copr_base 48.2 KiB krb5-devel x86_64 0:1.21.3-10.fc44 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https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 36.6 KiB texlive-symbol noarch 11:svn61719-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 78.3 KiB texlive-tex x86_64 11:svn66186-94.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 381.3 KiB texlive-tex-ini-files noarch 11:svn40533-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 8.1 KiB texlive-texlive-common-doc noarch 11:svn54176-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 265.5 KiB texlive-texlive-en noarch 11:svn66572-94.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 5.9 MiB texlive-texlive-msg-translations noarch 11:svn66593-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 1.4 MiB texlive-texlive-scripts noarch 11:svn66584-94.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 337.2 KiB texlive-texlive-scripts-extra noarch 11:svn62517-94.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 115.3 KiB texlive-texlive.infra noarch 11:svn66512-94.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 1.0 MiB texlive-times noarch 11:svn61719-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 992.2 KiB texlive-tipa noarch 11:svn29349.1.3-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 3.7 MiB texlive-titlesec noarch 11:svn59845-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 97.8 KiB texlive-tools noarch 11:svn64892-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 403.2 KiB texlive-underscore noarch 11:svn18261.0-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 19.3 KiB texlive-unicode-data noarch 11:svn64423-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 3.1 MiB texlive-uniquecounter noarch 11:svn53162-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 312.0 KiB texlive-url noarch 11:svn32528.3.4-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 21.4 KiB texlive-utopia noarch 11:svn15878.0-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 540.6 KiB texlive-varwidth noarch 11:svn24104.0.92-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 19.5 KiB texlive-xcolor noarch 11:svn63563-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 79.3 KiB texlive-xdvi x86_64 11:svn62387-94.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 739.3 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https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 79.5 KiB texlive-zref noarch 11:svn62977-80.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 816.8 KiB udunits2 x86_64 0:2.2.28-12.fc43 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 1.0 MiB xml-common noarch 0:0.6.3-67.fc43 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 78.4 KiB xpdf-libs x86_64 1:4.06-1.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 1.7 MiB zlib-ng-compat-devel x86_64 0:2.3.2-2.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 107.0 KiB zziplib x86_64 0:0.13.78-3.fc44 https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch 232.2 KiB Transaction Summary: Installing: 524 packages Total size of inbound packages is 327 MiB. Need to download 214 MiB. After this operation, 836 MiB extra will be used (install 836 MiB, remove 0 B). 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Finished %pretrans scriptlet: texlive-base-11:20230311-94.fc44.x86_64 >>> [RPM] /var/lib/mock/fedora-rawhide-x86_64-1767063830.861866/root/var/cache/dnf/copr_base-a2b79860a4d039f2/packages/antlr-C++-2.7.7-88.fc44.x86_64.rpm: Header OpenPGP V4 RSA/SHA256 signature, key ID 52ac7d71d4a9769d: NOKEY [ 2/526] Prepare transaction 100% | 2.7 KiB/s | 524.0 B | 00m00s [ 3/526] Installing texlive-base-11:20 100% | 473.7 MiB/s | 18.9 MiB | 00m00s [ 4/526] Installing texlive-lib-11:202 100% | 267.8 MiB/s | 1.1 MiB | 00m00s [ 5/526] Installing libpng-2:1.6.53-1. 100% | 237.3 MiB/s | 243.0 KiB | 00m00s [ 6/526] Installing libmpc-0:1.3.1-8.f 100% | 158.2 MiB/s | 162.0 KiB | 00m00s [ 7/526] Installing libaec-0:1.1.4-4.f 100% | 90.4 MiB/s | 92.5 KiB | 00m00s [ 8/526] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 9/526] Installing cmake-filesystem-0 100% | 7.4 MiB/s | 7.6 KiB | 00m00s [ 10/526] Installing expat-0:2.7.3-1.fc 100% | 21.1 MiB/s | 303.2 KiB | 00m00s [ 11/526] Installing 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00m00s [153/526] Installing perl-English-0:1.1 100% | 0.0 B/s | 6.7 KiB | 00m00s [154/526] Installing perl-Crypt-URandom 100% | 61.4 MiB/s | 62.9 KiB | 00m00s [155/526] Installing perl-Data-OptList- 100% | 51.0 MiB/s | 52.2 KiB | 00m00s [156/526] Installing perl-Parse-RecDesc 100% | 174.3 MiB/s | 535.4 KiB | 00m00s [157/526] Installing perl-File-Listing- 100% | 0.0 B/s | 42.5 KiB | 00m00s [158/526] Installing perl-Sys-Hostname- 100% | 0.0 B/s | 16.5 KiB | 00m00s [159/526] Installing perl-Mail-Sendmail 100% | 65.1 MiB/s | 66.6 KiB | 00m00s [160/526] Installing perl-List-SomeUtil 100% | 106.4 MiB/s | 109.0 KiB | 00m00s [161/526] Installing perl-Params-Valida 100% | 148.7 MiB/s | 152.2 KiB | 00m00s [162/526] Installing perl-Module-CoreLi 100% | 626.9 MiB/s | 1.3 MiB | 00m00s [163/526] Installing perl-Module-Metada 100% | 0.0 B/s | 69.0 KiB | 00m00s [164/526] Installing perl-Business-ISSN 100% | 0.0 B/s | 23.0 KiB | 00m00s [165/526] Installing perl-Opcode-0:1.69 100% | 0.0 B/s | 50.0 KiB | 00m00s [166/526] Installing perl-Safe-0:2.47-5 100% | 0.0 B/s | 31.1 KiB | 00m00s [167/526] Installing perl-Text-BibTeX-0 100% | 33.3 MiB/s | 511.9 KiB | 00m00s [168/526] Installing perl-Unicode-Colla 100% | 381.4 MiB/s | 4.2 MiB | 00m00s [169/526] Installing perl-Unicode-UCD-0 100% | 101.0 MiB/s | 206.9 KiB | 00m00s [170/526] Installing perl-Date-Manip-0: 100% | 258.7 MiB/s | 10.9 MiB | 00m00s [171/526] Installing perl-Digest-SHA-1: 100% | 8.6 MiB/s | 115.0 KiB | 00m00s [172/526] Installing perl-Digest-HMAC-0 100% | 7.7 MiB/s | 31.5 KiB | 00m00s [173/526] Installing perl-NTLM-0:1.09-4 100% | 0.0 B/s | 32.7 KiB | 00m00s [174/526] Installing perl-Lingua-Transl 100% | 14.6 MiB/s | 179.3 KiB | 00m00s [175/526] Installing perl-Pod-Html-0:1. 100% | 3.6 MiB/s | 43.9 KiB | 00m00s [176/526] Installing perl-Unicode-EastA 100% | 33.1 MiB/s | 33.9 KiB | 00m00s [177/526] Installing perl-libintl-perl- 100% | 344.2 MiB/s | 4.1 MiB | 00m00s [178/526] Installing texinfo-0:7.2-7.fc 100% | 253.8 MiB/s | 7.4 MiB | 00m00s [179/526] Installing perl-WWW-RobotRule 100% | 25.2 MiB/s | 25.8 KiB | 00m00s [180/526] Installing perl-Filter-2:1.65 100% | 81.1 MiB/s | 166.2 KiB | 00m00s [181/526] Installing perl-encoding-4:3. 100% | 146.9 MiB/s | 150.4 KiB | 00m00s [182/526] Installing perl-open-0:1.13-5 100% | 0.0 B/s | 11.7 KiB | 00m00s [183/526] Installing perl-Compress-Raw- 100% | 68.4 MiB/s | 70.0 KiB | 00m00s [184/526] Installing perl-IO-Compress-0 100% | 68.9 MiB/s | 1.0 MiB | 00m00s [185/526] Installing perl-Net-HTTP-0:6. 100% | 76.8 MiB/s | 78.6 KiB | 00m00s [186/526] Installing perl-IO-HTML-0:1.0 100% | 0.0 B/s | 46.8 KiB | 00m00s [187/526] Installing perl-HTTP-Message- 100% | 214.8 MiB/s | 220.0 KiB | 00m00s [188/526] Installing perl-HTTP-Negotiat 100% | 0.0 B/s | 28.7 KiB | 00m00s [189/526] Installing perl-HTTP-Cookies- 100% | 73.9 MiB/s | 75.7 KiB | 00m00s [190/526] Installing perl-HTML-Tagset-0 100% | 0.0 B/s | 19.7 KiB | 00m00s [191/526] Installing perl-HTML-Parser-0 100% | 138.5 MiB/s | 283.7 KiB | 00m00s [192/526] Installing perl-libwww-perl-0 100% | 33.8 MiB/s | 484.1 KiB | 00m00s [193/526] Installing perl-XML-Parser-0: 100% | 214.7 MiB/s | 659.6 KiB | 00m00s [194/526] Installing perl-XML-XPath-0:1 100% | 15.8 MiB/s | 210.1 KiB | 00m00s [195/526] Installing texlive-epstopdf-1 100% | 3.3 MiB/s | 40.6 KiB | 00m00s [196/526] Installing texlive-epstopdf-p 100% | 378.9 MiB/s | 388.0 KiB | 00m00s [197/526] Installing texlive-graphics-d 100% | 97.5 MiB/s | 99.9 KiB | 00m00s [198/526] Installing texlive-unicode-da 100% | 511.8 MiB/s | 3.1 MiB | 00m00s [199/526] Installing texlive-tex-ini-fi 100% | 0.0 B/s | 10.1 KiB | 00m00s [200/526] Installing texlive-plain-11:s 100% | 111.1 MiB/s | 113.8 KiB | 00m00s [201/526] Installing texlive-knuth-lib- 100% | 103.8 MiB/s | 106.3 KiB | 00m00s [202/526] Installing texlive-hyphen-bas 100% | 64.3 MiB/s | 65.9 KiB | 00m00s [203/526] Installing texlive-hyph-utf8- 100% | 74.8 MiB/s | 76.6 KiB | 00m00s [204/526] Installing texlive-etex-11:sv 100% | 41.7 MiB/s | 42.7 KiB | 00m00s [205/526] Installing texlive-cm-11:svn5 100% | 167.9 MiB/s | 1.0 MiB | 00m00s [206/526] Installing texlive-texlive.in 100% | 67.1 MiB/s | 1.0 MiB | 00m00s [207/526] Installing texlive-luatex-11: 100% | 277.3 MiB/s | 9.2 MiB | 00m00s [208/526] Installing texlive-gsftopk-11 100% | 3.6 MiB/s | 48.4 KiB | 00m00s [209/526] Installing texlive-texlive-sc 100% | 24.3 MiB/s | 349.0 KiB | 00m00s [210/526] Installing texlive-kpathsea-1 100% | 121.5 MiB/s | 2.1 MiB | 00m00s [211/526] Installing texlive-iftex-11:s 100% | 0.0 B/s | 30.3 KiB | 00m00s [212/526] Installing texlive-etex-pkg-1 100% | 0.0 B/s | 19.0 KiB | 00m00s [213/526] Installing texlive-etoolbox-1 100% | 0.0 B/s | 67.7 KiB | 00m00s [214/526] Installing texlive-url-11:svn 100% | 0.0 B/s | 22.1 KiB | 00m00s [215/526] Installing texlive-pdftexcmds 100% | 415.6 MiB/s | 425.6 KiB | 00m00s [216/526] Installing texlive-atbegshi-1 100% | 144.9 MiB/s | 445.1 KiB | 00m00s [217/526] Installing texlive-babel-11:s 100% | 76.6 MiB/s | 2.2 MiB | 00m00s [218/526] Installing texlive-amsmath-11 100% | 262.4 MiB/s | 268.7 KiB | 00m00s [219/526] Installing texlive-kvoptions- 100% | 269.3 MiB/s | 551.6 KiB | 00m00s [220/526] Installing texlive-amsfonts-1 100% | 287.7 MiB/s | 6.0 MiB | 00m00s [221/526] Installing texlive-latex-font 100% | 121.3 MiB/s | 124.2 KiB | 00m00s [222/526] Installing texlive-ltxcmds-11 100% | 415.6 MiB/s | 425.5 KiB | 00m00s [223/526] Installing texlive-atveryend- 100% | 200.8 MiB/s | 411.2 KiB | 00m00s [224/526] Installing texlive-lm-11:svn6 100% | 476.4 MiB/s | 39.5 MiB | 00m00s [225/526] Installing texlive-booktabs-1 100% | 0.0 B/s | 19.0 KiB | 00m00s [226/526] Installing texlive-footmisc-1 100% | 0.0 B/s | 65.6 KiB | 00m00s [227/526] Installing texlive-multido-11 100% | 0.0 B/s | 19.6 KiB | 00m00s [228/526] Installing texlive-glyphlist- 100% | 0.0 B/s | 91.1 KiB | 00m00s [229/526] Installing texlive-lua-alt-ge 100% | 0.0 B/s | 4.3 KiB | 00m00s [230/526] Installing texlive-modes-11:s 100% | 382.8 MiB/s | 391.9 KiB | 00m00s [231/526] Installing texlive-etexcmds-1 100% | 314.7 MiB/s | 322.3 KiB | 00m00s [232/526] Installing texlive-infwarerr- 100% | 300.3 MiB/s | 307.5 KiB | 00m00s [233/526] Installing texlive-l3backend- 100% | 553.5 MiB/s | 1.1 MiB | 00m00s [234/526] Installing texlive-hypdoc-11: 100% | 351.1 MiB/s | 359.5 KiB | 00m00s [235/526] Installing texlive-paralist-1 100% | 0.0 B/s | 24.1 KiB | 00m00s [236/526] Installing texlive-ragged2e-1 100% | 716.1 MiB/s | 733.3 KiB | 00m00s [237/526] Installing texlive-setspace-1 100% | 0.0 B/s | 22.4 KiB | 00m00s [238/526] Installing texlive-palatino-1 100% | 186.8 MiB/s | 1.1 MiB | 00m00s [239/526] Installing texlive-zapfding-1 100% | 80.8 MiB/s | 82.7 KiB | 00m00s [240/526] Installing texlive-marvosym-1 100% | 183.9 MiB/s | 188.3 KiB | 00m00s [241/526] Installing texlive-auxhook-11 100% | 296.1 MiB/s | 303.2 KiB | 00m00s [242/526] Installing texlive-graphics-c 100% | 0.0 B/s | 3.9 KiB | 00m00s [243/526] Installing texlive-graphics-1 100% | 125.6 MiB/s | 128.7 KiB | 00m00s [244/526] Installing texlive-tools-11:s 100% | 201.0 MiB/s | 411.7 KiB | 00m00s [245/526] Installing texlive-xkeyval-11 100% | 0.0 B/s | 71.6 KiB | 00m00s [246/526] Installing texlive-colortbl-1 100% | 0.0 B/s | 21.8 KiB | 00m00s [247/526] Installing texlive-caption-11 100% | 445.6 MiB/s | 912.6 KiB | 00m00s [248/526] Installing texlive-csquotes-1 100% | 0.0 B/s | 113.3 KiB | 00m00s [249/526] Installing texlive-geometry-1 100% | 0.0 B/s | 50.2 KiB | 00m00s [250/526] Installing texlive-subfig-11: 100% | 0.0 B/s | 37.5 KiB | 00m00s [251/526] Installing texlive-breakurl-1 100% | 0.0 B/s | 17.9 KiB | 00m00s [252/526] Installing texlive-logreq-11: 100% | 0.0 B/s | 27.2 KiB | 00m00s [253/526] Installing texlive-sauerj-11: 100% | 0.0 B/s | 28.6 KiB | 00m00s [254/526] Installing texlive-catchfile- 100% | 312.5 MiB/s | 320.0 KiB | 00m00s [255/526] Installing texlive-ifplatform 100% | 0.0 B/s | 13.5 KiB | 00m00s [256/526] Installing texlive-auto-pst-p 100% | 0.0 B/s | 15.6 KiB | 00m00s [257/526] Installing texlive-metafont-1 100% | 52.5 MiB/s | 806.2 KiB | 00m00s [258/526] Installing texlive-dvips-11:s 100% | 87.3 MiB/s | 1.6 MiB | 00m00s [259/526] Installing texlive-babelbib-1 100% | 384.4 MiB/s | 787.2 KiB | 00m00s [260/526] Installing texlive-memoir-11: 100% | 472.3 MiB/s | 483.6 KiB | 00m00s [261/526] Installing texlive-epsf-11:sv 100% | 0.0 B/s | 54.5 KiB | 00m00s [262/526] Installing texlive-texlive-sc 100% | 9.4 MiB/s | 125.0 KiB | 00m00s [263/526] Installing texlive-bibtex-11: 100% | 54.9 MiB/s | 786.8 KiB | 00m00s [264/526] Installing texlive-colorprofi 100% | 89.2 MiB/s | 274.1 KiB | 00m00s [265/526] Installing texlive-ec-11:svn2 100% | 116.0 MiB/s | 2.7 MiB | 00m00s [266/526] Installing texlive-enctex-11: 100% | 182.9 MiB/s | 187.3 KiB | 00m00s [267/526] Installing texlive-hyphenex-1 100% | 0.0 B/s | 26.1 KiB | 00m00s [268/526] Installing texlive-knuth-loca 100% | 110.4 MiB/s | 113.1 KiB | 00m00s [269/526] Installing texlive-luahbtex-1 100% | 226.7 MiB/s | 6.3 MiB | 00m00s [270/526] Installing texlive-makeindex- 100% | 38.4 MiB/s | 511.7 KiB | 00m00s [271/526] Installing texlive-mflogo-11: 100% | 13.3 MiB/s | 13.6 KiB | 00m00s [272/526] Installing texlive-mfware-11: 100% | 16.3 MiB/s | 216.4 KiB | 00m00s [273/526] Installing texlive-tex-11:svn 100% | 28.8 MiB/s | 382.8 KiB | 00m00s [274/526] Installing texlive-texlive-en 100% | 589.6 MiB/s | 5.9 MiB | 00m00s [275/526] Installing texlive-texlive-ms 100% | 468.8 MiB/s | 1.4 MiB | 00m00s [276/526] Installing texlive-xdvi-11:sv 100% | 48.3 MiB/s | 741.2 KiB | 00m00s [277/526] Installing texlive-dehyph-11: 100% | 235.5 MiB/s | 241.2 KiB | 00m00s [278/526] Installing texlive-pdftex-11: 100% | 185.1 MiB/s | 4.6 MiB | 00m00s [279/526] Installing texlive-everyshi-1 100% | 155.2 MiB/s | 158.9 KiB | 00m00s [280/526] Installing texlive-firstaid-1 100% | 291.8 MiB/s | 298.8 KiB | 00m00s [281/526] Installing texlive-xetexconfi 100% | 0.0 B/s | 776.0 B | 00m00s [282/526] Installing texlive-alphalph-1 100% | 368.3 MiB/s | 377.1 KiB | 00m00s [283/526] Installing texlive-enumitem-1 100% | 0.0 B/s | 60.1 KiB | 00m00s [284/526] Installing texlive-hologo-11: 100% | 650.5 MiB/s | 666.1 KiB | 00m00s [285/526] Installing texlive-underscore 100% | 0.0 B/s | 20.1 KiB | 00m00s [286/526] Installing texlive-fileconten 100% | 0.0 B/s | 13.0 KiB | 00m00s [287/526] Installing texlive-pst-math-1 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [288/526] Installing texlive-avantgar-1 100% | 207.0 MiB/s | 1.2 MiB | 00m00s [289/526] Installing texlive-bookman-11 100% | 205.6 MiB/s | 1.2 MiB | 00m00s [290/526] Installing texlive-charter-11 100% | 202.6 MiB/s | 415.0 KiB | 00m00s [291/526] Installing texlive-courier-11 100% | 228.8 MiB/s | 937.1 KiB | 00m00s [292/526] Installing texlive-helvetic-1 100% | 228.5 MiB/s | 1.8 MiB | 00m00s [293/526] Installing texlive-symbol-11: 100% | 80.1 MiB/s | 82.0 KiB | 00m00s [294/526] Installing texlive-times-11:s 100% | 199.6 MiB/s | 1.0 MiB | 00m00s [295/526] Installing texlive-utopia-11: 100% | 269.2 MiB/s | 551.4 KiB | 00m00s [296/526] Installing texlive-fpl-11:svn 100% | 635.9 MiB/s | 651.2 KiB | 00m00s [297/526] Installing texlive-mathpazo-1 100% | 113.9 MiB/s | 116.7 KiB | 00m00s [298/526] Installing texlive-psnfss-11: 100% | 58.3 MiB/s | 119.5 KiB | 00m00s [299/526] Installing texlive-bookmark-1 100% | 558.8 MiB/s | 572.2 KiB | 00m00s [300/526] Installing texlive-marginnote 100% | 0.0 B/s | 23.3 KiB | 00m00s [301/526] Installing texlive-mparhack-1 100% | 0.0 B/s | 21.1 KiB | 00m00s [302/526] Installing texlive-picture-11 100% | 317.1 MiB/s | 324.8 KiB | 00m00s [303/526] Installing texlive-gettitlest 100% | 332.2 MiB/s | 340.1 KiB | 00m00s [304/526] Installing texlive-hobsub-11: 100% | 0.0 B/s | 81.9 KiB | 00m00s [305/526] Installing texlive-hycolor-11 100% | 403.5 MiB/s | 413.1 KiB | 00m00s [306/526] Installing texlive-intcalc-11 100% | 461.7 MiB/s | 472.8 KiB | 00m00s [307/526] Installing texlive-kvdefineke 100% | 308.1 MiB/s | 315.5 KiB | 00m00s [308/526] Installing texlive-kvsetkeys- 100% | 418.8 MiB/s | 428.8 KiB | 00m00s [309/526] Installing texlive-letltxmacr 100% | 305.3 MiB/s | 312.6 KiB | 00m00s [310/526] Installing texlive-pdfescape- 100% | 368.3 MiB/s | 377.2 KiB | 00m00s [311/526] Installing texlive-refcount-1 100% | 341.0 MiB/s | 349.2 KiB | 00m00s [312/526] Installing texlive-stringenc- 100% | 351.4 MiB/s | 1.1 MiB | 00m00s [313/526] Installing texlive-bigintcalc 100% | 504.7 MiB/s | 516.8 KiB | 00m00s [314/526] Installing texlive-bitset-11: 100% | 648.0 MiB/s | 663.5 KiB | 00m00s [315/526] Installing texlive-xstring-11 100% | 0.0 B/s | 57.0 KiB | 00m00s [316/526] Installing texlive-pdfcolmk-1 100% | 0.0 B/s | 20.7 KiB | 00m00s [317/526] Installing texlive-xcolor-11: 100% | 0.0 B/s | 80.7 KiB | 00m00s [318/526] Installing texlive-eso-pic-11 100% | 0.0 B/s | 28.6 KiB | 00m00s [319/526] Installing texlive-varwidth-1 100% | 0.0 B/s | 20.3 KiB | 00m00s [320/526] Installing texlive-uniquecoun 100% | 306.1 MiB/s | 313.5 KiB | 00m00s [321/526] Installing texlive-rerunfilec 100% | 354.8 MiB/s | 363.3 KiB | 00m00s [322/526] Installing texlive-hyperref-1 100% | 375.7 MiB/s | 769.4 KiB | 00m00s [323/526] Installing texlive-attachfile 100% | 0.0 B/s | 33.2 KiB | 00m00s [324/526] Installing texlive-luabidi-11 100% | 0.0 B/s | 26.8 KiB | 00m00s [325/526] Installing texlive-makecmds-1 100% | 0.0 B/s | 11.9 KiB | 00m00s [326/526] Installing texlive-ctablestac 100% | 0.0 B/s | 20.9 KiB | 00m00s [327/526] Installing texlive-luatexbase 100% | 0.0 B/s | 15.1 KiB | 00m00s [328/526] Installing texlive-euenc-11:s 100% | 0.0 B/s | 42.2 KiB | 00m00s [329/526] Installing texlive-kastrup-11 100% | 0.0 B/s | 4.2 KiB | 00m00s [330/526] Installing texlive-changepage 100% | 0.0 B/s | 28.2 KiB | 00m00s [331/526] Installing texlive-fancyhdr-1 100% | 0.0 B/s | 32.7 KiB | 00m00s [332/526] Installing texlive-natbib-11: 100% | 0.0 B/s | 134.2 KiB | 00m00s [333/526] Installing texlive-placeins-1 100% | 0.0 B/s | 5.4 KiB | 00m00s [334/526] Installing texlive-titlesec-1 100% | 0.0 B/s | 98.9 KiB | 00m00s [335/526] Installing texlive-zref-11:sv 100% | 401.4 MiB/s | 822.0 KiB | 00m00s [336/526] Installing texlive-float-11:s 100% | 0.0 B/s | 16.2 KiB | 00m00s [337/526] Installing texlive-ifmtarg-11 100% | 0.0 B/s | 9.9 KiB | 00m00s [338/526] Installing texlive-fp-11:svn4 100% | 124.9 MiB/s | 127.9 KiB | 00m00s [339/526] Installing texlive-lua-uni-al 100% | 128.2 MiB/s | 131.3 KiB | 00m00s [340/526] Installing texlive-lualibs-11 100% | 376.8 MiB/s | 771.6 KiB | 00m00s [341/526] Installing texlive-luaotfload 100% | 293.5 MiB/s | 8.2 MiB | 00m00s [342/526] Installing texlive-latexconfi 100% | 9.6 MiB/s | 9.8 KiB | 00m00s [343/526] Installing perl-XML-SAX-0:1.0 100% | 2.6 MiB/s | 126.0 KiB | 00m00s [344/526] Installing perl-XML-LibXML-1: 100% | 11.3 MiB/s | 927.4 KiB | 00m00s [345/526] Installing perl-XML-LibXML-Si 100% | 51.1 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0.0 B/s | 8.9 KiB | 00m00s [359/526] Installing perl-meta-notation 100% | 0.0 B/s | 2.3 KiB | 00m00s [360/526] Installing perl-sigtrap-0:1.1 100% | 0.0 B/s | 11.5 KiB | 00m00s [361/526] Installing perl-MIME-Charset- 100% | 104.8 MiB/s | 107.3 KiB | 00m00s [362/526] Installing perl-Unicode-LineB 100% | 52.0 MiB/s | 266.4 KiB | 00m00s [363/526] Installing perl-IPC-SysV-0:2. 100% | 74.9 MiB/s | 76.7 KiB | 00m00s [364/526] Installing perl-Mail-Sender-1 100% | 158.6 MiB/s | 162.5 KiB | 00m00s [365/526] Installing perl-Sys-Syslog-0: 100% | 94.6 MiB/s | 96.9 KiB | 00m00s [366/526] Installing perl-List-UtilsBy- 100% | 0.0 B/s | 57.2 KiB | 00m00s [367/526] Installing perl-List-AllUtils 100% | 132.7 MiB/s | 135.9 KiB | 00m00s [368/526] Installing perl-Mozilla-CA-0: 100% | 0.0 B/s | 13.1 KiB | 00m00s [369/526] Installing perl-LWP-Protocol- 100% | 0.0 B/s | 31.1 KiB | 00m00s [370/526] Installing perl-Convert-ASN1- 100% | 169.3 MiB/s | 173.4 KiB | 00m00s [371/526] Installing perl-ExtUtils-MM-U 100% 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4.5 MiB/s | 60.1 KiB | 00m00s [526/526] Installing antlr-C++-0:2.7.7- 100% | 365.6 KiB/s | 11.1 MiB | 00m31s Warning: skipped OpenPGP checks for 519 packages from repositories: copr_base, https_kojipkgs_fedoraproject_org_repos_f44_build_side_124978_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1758758400 Wrote: /builddir/build/SRPMS/nco-5.3.5-1.fc44.src.rpm Updating and loading repositories: Additional repo https_kojipkgs_fedorap 100% | 71.3 KiB/s | 3.5 KiB | 00m00s Copr repository 100% | 30.7 KiB/s | 1.5 KiB | 00m00s fedora 100% | 64.1 KiB/s | 24.5 KiB | 00m00s Repositories loaded. Nothing to do. Package "antlr-C++-2.7.7-88.fc44.x86_64" is already installed. Package "bison-3.8.2-11.fc44.x86_64" is already installed. Package "chrpath-0.16-26.fc44.x86_64" is already installed. Package "flex-2.6.4-20.fc44.x86_64" is already installed. Package "gawk-5.3.2-2.fc44.x86_64" is already installed. Package "gcc-c++-16.0.0-0.3.fc44.x86_64" is already installed. Package "gsl-devel-2.8-2.fc44.x86_64" is already installed. Package "make-1:4.4.1-11.fc44.x86_64" is already installed. Package "netcdf-devel-4.9.3-1.fc44.x86_64" is already installed. Package "texinfo-7.2-7.fc44.x86_64" is already installed. Package "texinfo-tex-7.2-7.fc44.x86_64" is already installed. Package "udunits2-devel-2.2.28-12.fc43.x86_64" is already installed. Finish: build setup for nco-5.3.5-1.fc44.src.rpm Start: rpmbuild nco-5.3.5-1.fc44.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1758758400 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.AYstJk Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.MMokKd + umask 022 + cd /builddir/build/BUILD/nco-5.3.5-build + cd /builddir/build/BUILD/nco-5.3.5-build + rm -rf nco-5.3.5 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/nco-5.3.5.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd nco-5.3.5 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . Patch #0 (nco-install_C_headers.patch): + echo 'Patch #0 (nco-install_C_headers.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .install_C_headers --fuzz=0 patching file src/nco/Makefile.in Hunk #1 succeeded at 791 (offset 24 lines). + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.iY4MD4 + umask 022 + cd /builddir/build/BUILD/nco-5.3.5-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.3.5 + export CPPFLAGS=-I/usr/include/udunits2 + CPPFLAGS=-I/usr/include/udunits2 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup '/lt_cv_sys_global_symbol_to_cdecl=/s#(".*"|'\''.*'\'')#"sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2025-09-25 18:58:56.000000000 +0000 +++ ./configure 2025-12-30 03:04:58.624179912 +0000 @@ -9070,7 +9070,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="sed -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"\ $lt_cdecl_hook\ " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" @@ -23433,7 +23433,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./autobld/config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./autobld/config.sub ++ basename ./autobld/config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./autobld/config.sub '/usr/lib/rpm/redhat/config.sub' -> './autobld/config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./autobld/config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./autobld/config.guess ++ basename ./autobld/config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./autobld/config.guess '/usr/lib/rpm/redhat/config.guess' -> './autobld/config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors"~' ./autobld/ltmain.sh ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=x86_64-redhat-linux --host=x86_64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/bin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info HAVE_ANTLR=yes --disable-dependency-tracking --includedir=/usr/include/nco checking build system type... x86_64-redhat-linux-gnu checking host system type... x86_64-redhat-linux-gnu checking target system type... x86_64-redhat-linux-gnu ./configure: line 3579: git: command not found checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '1000' is supported by ustar format... yes checking whether GID '135' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking for x86_64-redhat-linux-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... -std=gnu++11 checking dependency style of g++ -std=gnu++11... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for flex... flex checking for lex output file root... lex.yy checking for lex library... none needed checking whether yytext is a pointer... yes checking whether ln -s works... yes checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-redhat-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-redhat-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-redhat-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-redhat-linux-strip... no checking for strip... strip checking for x86_64-redhat-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-redhat-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for ld used by g++ -std=gnu++11... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ -std=gnu++11 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ -std=gnu++11 option to produce PIC... -fPIC -DPIC checking if g++ -std=gnu++11 PIC flag -fPIC -DPIC works... yes checking if g++ -std=gnu++11 static flag -static works... no checking if g++ -std=gnu++11 supports -c -o file.o... yes checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes checking whether the g++ -std=gnu++11 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for working memcmp... yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... no checking for working strtod... yes checking for canonicalize_file_name... yes checking for creat... yes checking for floor... no checking for gethostname... yes checking for getpagesize... yes checking for getrusage... yes checking for memchr... yes checking for memmove... yes checking for memset... yes checking for mkstemp... yes checking for pow... no checking for readlink... yes checking for realpath... yes checking for regcomp... yes checking for setlocale... yes checking for sqrt... no checking for strchr... yes checking for strerror... yes checking for strpbrk... yes checking for strrchr... yes checking for strstr... yes checking for strtol... yes checking for egrep... (cached) /usr/bin/grep -E checking for fcntl.h... yes checking for getopt.h... yes checking for libintl.h... yes checking for limits.h... yes checking for locale.h... yes checking for netinet/in.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for cstdlib... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t... yes checking for gid_t... yes checking for ptrdiff_t... yes checking size of int*... 8 checking for gcc option to enable large file support... none needed ################################# # Test for netCDF # ################################ checking for netcdf.h... yes checking for nc_open in -lnetcdf... yes ################################# # Test for netCDF4 support # ################################# checking for gcc options needed to detect all undeclared functions... none needed checking whether NC_CHUNKED is declared... yes configure: netcdf.h contains netCDF4 definitions checking for nc_def_var_chunking in -lnetcdf... yes configure: Good news: Simple program compiles and links to netCDF4 library checking for netcdf_mem.h... yes checking for gcc option to support OpenMP... -fopenmp configure: OpenMP support enabled Beginning generic tests for DAP support Testing for DAP-netCDF support (is DAP in libnetcdf.a?)... checking for daperror in -lnetcdf... yes configure: DAP support enabled checking for getopt_long... yes checking for sinf in -lsunmath... no checking for gettext in -lintl... no checking for res_init in -lresolv... no checking for main in -lsocket... no checking for main in -lthread... no checking for nco_open in -lnco... no checking for nc_inq_format... yes checking for nc_inq_path... yes checking for nc_set_log_level... no checking for nc_rename_grp... yes checking for getopt... yes checking for getopt_long... (cached) yes checking for atan2... no checking for acosf... no checking for asinf... no checking for atanf... no checking for atan2f... no checking for cosf... no checking for expf... no checking for fabsf... no checking for fmodf... no checking for log10f... no checking for logf... no checking for powf... no checking for sinf... no checking for sqrtf... no checking for tanf... no checking for erff... no checking for erfcf... no checking for gammaf... no checking for acoshf... no checking for asinhf... no checking for atanhf... no checking for coshf... no checking for sinhf... no checking for tanhf... no checking for ceilf... no checking for floorf... no checking for nearbyint... no checking for rint... no checking for round... no checking for trunc... no checking for nearbyintf... no checking for rintf... no checking for roundf... no checking for truncf... no checking for getopt_long... (cached) yes checking for strdup... yes checking for strcasecmp... yes checking for strsep... yes checking for strcasestr... yes checking for htonl... yes checking for htons... yes checking for ntohl... yes checking for ntohs... yes checking for __builtin_bswap16... no checking for __builtin_bswap32... no checking for __builtin_bswap64... no ########################################################## # Sorting out MacOS build parameters # ########################################################## ################################# # Testing for ANTLR support # ################################# checking for runantlr... yes configure: antlr library was found checking for antlr/CommonToken.hpp... yes INFO: ANTLR development support found---will build nco++ directory and ncap2 checking whether NCO C++ interface library libnco_c++ should be built... no ######################################## # Testing for GSL support # ######################################## configure: These GSL library and header tests must succeed for GSL support: checking for gsl_sf_gamma_inc in -lgsl... yes checking for /usr/include/gsl/gsl_sf_gamma.h... yes configure: GSL support enabled ######################################## # Testing for CCR support # ######################################## checking where to put HDF5 plugins... . checking whether Community Codec Repository library should be used... no checking for regex.h... yes checking for sys/types.h... (cached) yes checking for regexec... yes checking for regcomp... (cached) yes checking for regfree... yes ######################################## # Testing for UDUNITS2 support # ######################################## checking for udunits2.h... yes checking for library containing ut_parse... -ludunits2 configure: UDUnits2 support enabled checking for ncgen... /usr/bin/ncgen configure: Creating sample netCDF data files for self-tests ############################### # Require Shared Libs? # ############################### checking for makeinfo... yes MAKEINFO_VERSION=7.2 configure: Documentation support enabled checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating src/Makefile config.status: creating src/nco/Makefile config.status: creating man/Makefile config.status: creating src/nco++/Makefile config.status: creating doc/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration Parameters: ANTLR_INC............ ANTLR_ROOT........... AR_FLAGS............. cru CC................... gcc CFLAGS............... -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 CPP.................. gcc -E CPPFLAGS............. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include CXX.................. g++ -std=gnu++11 CXXFLAGS............. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ENABLE_CCR........... no ENABLE_DAP........... yes ENABLE_GSL........... yes ENABLE_NETCDF4....... yes ENABLE_OPENMP........ yes ENABLE_UDUNITS2...... yes GSL_INC.............. /usr/include GSL_ROOT............. /usr HAVE_ANTLR........... yes HAVE_MAKEINFO........ yes HAVE_NETCDF4_H....... yes HDF5_PLUGIN_PATH..... . HOST................. HOSTNAME............. 54029028aba54357a55f76f62190a819 LDFLAGS.............. -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes LIBS................. -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -lgsl -lgslcblas -lm NETCDF_INC........... NETCDF_ROOT.......... /usr OPENMP_CFLAGS........ -fopenmp host................. x86_64-redhat-linux-gnu install prefix ...... /usr ******************************************************************* Configuration complete. You are now ready to run 'make'. Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax). If the build fails, please examine the file 'configure.eg' in the top-level NCO directory. It contains examples known to build NCO for various platforms and compilers. ******************************************************************* + /usr/bin/make -O -j4 V=1 VERBOSE=1 /usr/bin/make all-recursive Making all in data make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco/ncks: No such file or directory make[2]: [Makefile:589: in_4c.nc] Error 127 (ignored) make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -o big.nc big.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -o in_mlt_rec2.nc in_mlt_rec2.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -o in_mlt_rec1.nc in_mlt_rec1.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -o ref_utf8.nc ref_utf8.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -o in_4.nc in_4.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/ncgen -k netCDF-4 -lb -o "file://in_zarr4#mode=nczarr,file" in_zarr4.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' ln -s -f in_zarr4 h0001 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' ln -s -f in_zarr4 h0003 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' ln -s -f in_zarr4 h0002 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' Making all in src Making all in nco make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncatted.o ncatted.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_bnr.lo nco_bnr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_bnr.c -fPIC -DPIC -o .libs/nco_bnr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_bnr.c -o nco_bnr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_aux.lo nco_aux.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_aux.c -o nco_aux.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnf_dmn.lo nco_cnf_dmn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_dmn.c -fPIC -DPIC -o .libs/nco_cnf_dmn.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_dmn.c -o nco_cnf_dmn.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cln_utl.lo nco_cln_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cln_utl.c -fPIC -DPIC -o .libs/nco_cln_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cln_utl.c -o nco_cln_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' nco_cln_utl.c: In function ‘nco_cln_var_prs’: nco_cln_utl.c:1335:27: warning: ‘mss_val_flt’ may be used uninitialized [-Wmaybe-uninitialized] 1335 | if(var->has_mss_val && var->val.fp[idx] == mss_val_flt){ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_cln_utl.c:1331:11: note: ‘mss_val_flt’ was declared here 1331 | float mss_val_flt; | ^~~~~~~~~~~ nco_cln_utl.c:1316:27: warning: ‘mss_val_dbl’ may be used uninitialized [-Wmaybe-uninitialized] 1316 | if(var->has_mss_val && var->val.dp[idx] == mss_val_dbl){ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_cln_utl.c:1312:12: note: ‘mss_val_dbl’ was declared here 1312 | double mss_val_dbl; | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnv_arm.lo nco_cnv_arm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_arm.c -o nco_cnv_arm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_att_utl.lo nco_att_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_att_utl.c -o nco_att_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnf_typ.lo nco_cnf_typ.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_typ.c -fPIC -DPIC -o .libs/nco_cnf_typ.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_typ.c -o nco_cnf_typ.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnv_csm.lo nco_cnv_csm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_csm.c -fPIC -DPIC -o .libs/nco_cnv_csm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_csm.c -o nco_cnv_csm.o >/dev/null 2>&1 In file included from /usr/include/stdio.h:974, from nco_cnv_csm.h:17, from nco_cnv_csm.c:10: In function ‘fprintf’, inlined from ‘nco_cnv_cf_cll_mth_add’ at nco_cnv_csm.c:517:48: /usr/include/bits/stdio2.h:111:10: warning: ‘cll_mth_clm’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_cnv_csm.c: In function ‘nco_cnv_cf_cll_mth_add’: nco_cnv_csm.c:449:9: note: ‘cll_mth_clm’ was declared here 449 | char *cll_mth_clm; /* [sng] Cell methods for climatology */ | ^~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_crt.lo nco_crt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_crt.c -fPIC -DPIC -o .libs/nco_crt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_crt.c -o nco_crt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_dbg.lo nco_dbg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dbg.c -o nco_dbg.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnk.lo nco_cnk.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnk.c -fPIC -DPIC -o .libs/nco_cnk.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnk.c -o nco_cnk.o >/dev/null 2>&1 In file included from /usr/include/stdio.h:974, from nco_cnk.h:18, from nco_cnk.c:45: In function ‘fprintf’, inlined from ‘nco_cnk_sz_set_trv’ at nco_cnk.c:1336:8: /usr/include/bits/stdio2.h:111:10: warning: ‘prt_sum’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_cnk.c: In function ‘nco_cnk_sz_set_trv’: nco_cnk.c:1311:12: note: ‘prt_sum’ was declared here 1311 | size_t prt_sum; /* [nbr] Partial sum (sum of coefficients times powers of two for higher powers */ | ^~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_dmn_utl.lo nco_dmn_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dmn_utl.c -fPIC -DPIC -o .libs/nco_dmn_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dmn_utl.c -o nco_dmn_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_ctl.lo nco_ctl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ctl.c -fPIC -DPIC -o .libs/nco_ctl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ctl.c -o nco_ctl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_flt.lo nco_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_flt.c -fPIC -DPIC -o .libs/nco_flt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_flt.c -o nco_flt.o >/dev/null 2>&1 nco_flt.c: In function ‘nco_qnt_mtd’: nco_flt.c:1524:83: warning: comparison between ‘nco_flt_typ_enm’ and ‘enum nco_baa_cnv’ [-Wenum-compare] 1524 | if((flg_hdf && nco_flt_hdf_enm == nco_flt_btr) || (flg_baa && ((nco_flt_baa_enm == nco_baa_btr) || (nco_flt_baa_enm == nco_baa_sh2)))) flg_mre=True; | ^~ nco_flt.c:1524:119: warning: comparison between ‘nco_flt_typ_enm’ and ‘enum nco_baa_cnv’ [-Wenum-compare] 1524 | if((flg_hdf && nco_flt_hdf_enm == nco_flt_btr) || (flg_baa && ((nco_flt_baa_enm == nco_baa_btr) || (nco_flt_baa_enm == nco_baa_sh2)))) flg_mre=True; | ^~ nco_flt.c:1621:32: warning: operation on ‘aed_ppc_lvl.id’ may be undefined [-Wsequence-point] 1621 | aed_ppc_cnt.id=aed_ppc_lvl.id=aed_ppc_lvl.id=var_id; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ nco_flt.c: In function ‘nco_flt_hdf5_prs’: nco_flt.c:404:28: warning: array subscript ‘unsigned int[0]’ is partly outside array bounds of ‘short int[1]’ [-Warray-bounds=] 404 | u32_lst[u32_nbr++]=*ui32p; | ^~~~~~ nco_flt.c:401:15: note: object ‘sht_foo’ of size 2 401 | short sht_foo=(short)strtol(prm_lst[prm_idx],&sng_cnv_rcd,NCO_SNG_CNV_BASE10); | ^~~~~~~ nco_flt.c:398:28: warning: array subscript ‘unsigned int[0]’ is partly outside array bounds of ‘short unsigned int[1]’ [-Warray-bounds=] 398 | u32_lst[u32_nbr++]=*ui32p; | ^~~~~~ nco_flt.c:395:24: note: object ‘usht_foo’ of size 2 395 | unsigned short usht_foo=(unsigned short)strtoul(prm_lst[prm_idx],&sng_cnv_rcd,NCO_SNG_CNV_BASE10); | ^~~~~~~~ nco_flt.c:339:37: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 339 | (void)fprintf(stderr,"%s: ERROR %s reports supplied filter string is empty\n",nco_prg_nm_get(),flt_sng); | ^~ nco_flt.c: In function ‘nco_qnt_mtd’: nco_flt.c:1696:11: warning: ‘aed_ppc_alg.att_nm’ may be used uninitialized [-Wmaybe-uninitialized] 1696 | (void)nco_aed_prc(nc_id,var_cnt_id,aed_cnt_alg); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_flt.c:1480:11: note: ‘aed_ppc_alg.att_nm’ was declared here 1480 | aed_sct aed_ppc_alg; | ^~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_fl_utl.lo nco_fl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_fl_utl.c -o nco_fl_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' nco_fl_utl.c: In function ‘nco_fl_nm_prs’: nco_fl_utl.c:1754:45: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~ nco_fl_utl.c:1754:41: note: directive argument in the range [-2147483648, 2147483645] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:974, from nco_fl_utl.h:26, from nco_fl_utl.c:10: In function ‘sprintf’, inlined from ‘nco_fl_nm_prs’ at nco_fl_utl.c:1754:8: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 9 and 19 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:580, from nco_fl_utl.h:28: In function ‘strncpy’, inlined from ‘nco_fl_mk_lcl’ at nco_fl_utl.c:1445:13: /usr/include/bits/string_fortified.h:112:10: warning: ‘strncpy’ destination unchanged after copying no bytes [-Wstringop-truncation] 112 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ nco_fl_utl.c: In function ‘nco_fl_ncz2psx’: nco_fl_utl.c:2581:25: warning: ‘psx_drc_lcl’ may be used uninitialized [-Wmaybe-uninitialized] 2581 | psx_drc_lcl[0]='.'; | ~~~~~~~~~~~~~~^~~~ nco_fl_utl.c:2519:11: note: ‘psx_drc_lcl’ was declared here 2519 | char *psx_drc_lcl; /* O [sng] POSIX path only, no filename, suitable for directory stat() */ | ^~~~~~~~~~~ nco_fl_utl.c:2595:29: warning: ‘psx_fll_lcl’ may be used uninitialized [-Wmaybe-uninitialized] 2595 | if(psx_fll) psx_fll_lcl=(char *)strdup(psx_fll_lcl); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_fl_utl.c:2518:11: note: ‘psx_fll_lcl’ was declared here 2518 | char *psx_fll_lcl; /* O [sng] Full POSIX path with filename, suitable for file stat() */ | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_grp_trv.lo nco_grp_trv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_trv.c -fPIC -DPIC -o .libs/nco_grp_trv.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_trv.c -o nco_grp_trv.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_lst_utl.lo nco_lst_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_lst_utl.c -o nco_lst_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' nco_lst_utl.c: In function ‘nco_fmt_sng_printf_subst’: nco_lst_utl.c:38:89: warning: unknown escape sequence: ‘\.’ 38 | const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */ | ^ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_kd.lo nco_kd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_kd.c -fPIC -DPIC -o .libs/nco_kd.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_kd.c -o nco_kd.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_md5.lo nco_md5.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_md5.c -fPIC -DPIC -o .libs/nco_md5.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_md5.c -o nco_md5.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_lmt.lo nco_lmt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_lmt.c -fPIC -DPIC -o .libs/nco_lmt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_lmt.c -o nco_lmt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_mmr.lo nco_mmr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mmr.c -fPIC -DPIC -o .libs/nco_mmr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mmr.c -o nco_mmr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_mss_val.lo nco_mss_val.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mss_val.c -fPIC -DPIC -o .libs/nco_mss_val.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mss_val.c -o nco_mss_val.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_mta.lo nco_mta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mta.c -fPIC -DPIC -o .libs/nco_mta.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mta.c -o nco_mta.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_msa.lo nco_msa.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_msa.c -fPIC -DPIC -o .libs/nco_msa.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_msa.c -o nco_msa.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_map.lo nco_map.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_map.c -fPIC -DPIC -o .libs/nco_map.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_map.c -o nco_map.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' nco_map.c: In function ‘nco_map_mk’: nco_map.c:302:12: warning: variable ‘flg_grd_out_rct’ set but not used [-Wunused-but-set-variable=] 302 | nco_bool flg_grd_out_rct=False; /* [flg] Rectangular coordinates */ | ^~~~~~~~~~~~~~~ nco_map.c:300:12: warning: variable ‘flg_grd_in_rct’ set but not used [-Wunused-but-set-variable=] 300 | nco_bool flg_grd_in_rct=False; /* [flg] Rectangular coordinates */ | ^~~~~~~~~~~~~~ nco_map.c:231:7: warning: variable ‘bnd_nbr_out’ set but not used [-Wunused-but-set-variable=] 231 | int bnd_nbr_out; /* [nbr] Number of vertices for destination grid coordinates */ | ^~~~~~~~~~~ nco_map.c:213:8: warning: variable ‘col_nbr_in’ set but not used [-Wunused-but-set-variable=] 213 | long col_nbr_in; /* [idx] Number of columns in source grid */ | ^~~~~~~~~~ nco_map.c:212:7: warning: variable ‘bnd_nbr_in’ set but not used [-Wunused-but-set-variable=] 212 | int bnd_nbr_in; /* [nbr] Number of vertices for source grid coordinates */ | ^~~~~~~~~~ nco_map.c: In function ‘nco_map_chk’: nco_map.c:2583:12: warning: variable ‘cnt_zro’ set but not used [-Wunused-but-set-variable=] 2583 | size_t cnt_zro; /* [nbr] Number of valid areas in Grid A */ | ^~~~~~~ nco_map.c: In function ‘nco_map_mk’: nco_map.c:418:15: warning: ‘lon_nbr_out’ may be used uninitialized [-Wmaybe-uninitialized] 418 | if(idx%lon_nbr_out == 0) idx_tst=idx; | ~~~^~~~~~~~~~~~ nco_map.c:233:8: note: ‘lon_nbr_out’ was declared here 233 | long lon_nbr_out; /* [nbr] Number of longitudes in destination grid */ | ^~~~~~~~~~~ nco_map.c:402:15: warning: ‘lon_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized] 402 | if(idx%lon_nbr_in == 0) idx_tst=idx; | ~~~^~~~~~~~~~~ nco_map.c:214:8: note: ‘lon_nbr_in’ was declared here 214 | long lon_nbr_in; /* [idx] Number of longitudes in source grid */ | ^~~~~~~~~~ nco_map.c: In function ‘nco_map_chk’: nco_map.c:2420:34: warning: ‘msk_ival_a’ may be used uninitialized [-Wmaybe-uninitialized] 2420 | if(has_mask_a && msk_ival_a[idx_col] == 0){ | ^ nco_map.c:2406:10: note: ‘msk_ival_a’ was declared here 2406 | int *msk_ival_a; | ^~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_omp.lo nco_omp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_omp.c -fPIC -DPIC -o .libs/nco_omp.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_omp.c -o nco_omp.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_pck.lo nco_pck.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_pck.c -o nco_pck.o >/dev/null 2>&1 nco_pck.c: In function ‘nco_pck_map_get’: nco_pck.c:160:88: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 160 | (void)fprintf(stderr,"%s: ERROR %s reports empty user-specified packing map string %s\n",nco_prg_nm,fnc_nm,nco_pck_map_sng); | ^~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_ply.lo nco_ply.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply.c -fPIC -DPIC -o .libs/nco_ply.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply.c -o nco_ply.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_netcdf.lo nco_netcdf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_netcdf.c -o nco_netcdf.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_ply_lst.lo nco_ply_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply_lst.c -fPIC -DPIC -o .libs/nco_ply_lst.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply_lst.c -o nco_ply_lst.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' nco_ply_lst.c: In function ‘nco_poly_lst_mk_vrl_crt’: nco_ply_lst.c:538:10: warning: variable ‘size’ set but not used [-Wunused-but-set-variable=] 538 | kd_box size; | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_rec_var.lo nco_rec_var.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rec_var.c -o nco_rec_var.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_ppc.lo nco_ppc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ppc.c -fPIC -DPIC -o .libs/nco_ppc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ppc.c -o nco_ppc.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_rth_flt.lo nco_rth_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_flt.c -fPIC -DPIC -o .libs/nco_rth_flt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_flt.c -o nco_rth_flt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_rth_utl.lo nco_rth_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_utl.c -fPIC -DPIC -o .libs/nco_rth_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_utl.c -o nco_rth_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_scl_utl.lo nco_scl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scl_utl.c -fPIC -DPIC -o .libs/nco_scl_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scl_utl.c -o nco_scl_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_grp_utl.lo nco_grp_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_utl.c -o nco_grp_utl.o >/dev/null 2>&1 nco_grp_utl.c: In function ‘nco_chk_xtn’: nco_grp_utl.c:2926:134: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2926 | if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of HDF-EOS5 standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_he5,att_xtn_val); | ^~ nco_grp_utl.c:2943:132: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2943 | if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of netCDF standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_nc,att_xtn_val); | ^~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_scm.lo nco_scm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scm.c -fPIC -DPIC -o .libs/nco_scm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scm.c -o nco_scm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_sld.lo nco_sld.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sld.c -fPIC -DPIC -o .libs/nco_sld.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sld.c -o nco_sld.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_sng_utl.lo nco_sng_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sng_utl.c -o nco_sng_utl.o >/dev/null 2>&1 nco_sng_utl.c: In function ‘nm2sng_cdl’: nco_sng_utl.c:270:41: warning: ‘__snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] 270 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In file included from /usr/include/stdio.h:974, from nco_sng_utl.h:21, from nco_sng_utl.c:10: In function ‘snprintf’, inlined from ‘nm2sng_cdl’ at nco_sng_utl.c:270:2: /usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output 5 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_sng_utl.c: In function ‘nm2sng_fl’: nco_sng_utl.c:466:41: warning: ‘__snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] 466 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In function ‘snprintf’, inlined from ‘nm2sng_fl’ at nco_sng_utl.c:466:2: /usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output 5 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_prn.lo nco_prn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_prn.c -o nco_prn.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' nco_prn.c: In function ‘nco_prn_var_val_lmt’: nco_prn.c:1651:53: warning: ‘%s’ directive writing up to 99 bytes into a region of size 86 [-Wformat-overflow=] 1651 | (void)sprintf(var_sng,"%%s%c%%ld--%%ld%c='%s' %%s",arr_lft_dlm,arr_rgt_dlm,dmn_sng); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:974, from nco_prn.h:22, from nco_prn.c:10: In function ‘sprintf’, inlined from ‘nco_prn_var_val_lmt’ at nco_prn.c:1651:10: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 19 and 118 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_prn.c: In function ‘nco_prn_var_dfn’: nco_prn.c:1886:36: warning: ‘vln_lng_avg’ may be used uninitialized [-Wmaybe-uninitialized] 1886 | if(cls_typ == NC_VLEN) (void)fprintf(fp_out,"%*s%s size (RAM) = %ld*mean_length(NC_VLEN)*sizeof(%s) = %ld*%g*%lu = %lu bytes\n",prn_ndn,spc_sng,var_trv->nm,var_sz,nco_typ_sng(bs_typ),var_sz,vln_lng_avg,(unsigned long)nco_typ_lng_udt(nc_id,bs_typ),(unsigned long)ram_sz_crr); else (void)fprintf(fp_out,"%*s%s size (RAM) = %ld*sizeof(%s) = %ld*%lu = %lu bytes\n",prn_ndn,spc_sng,var_trv->nm,var_sz,nco_typ_sng(cls_typ),var_sz,(unsigned long)nco_typ_lng_udt(nc_id,bs_typ),(unsigned long)ram_sz_crr); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:1728:9: note: ‘vln_lng_avg’ was declared here 1728 | float vln_lng_avg; /* [nbr] Mean vlen length */ | ^~~~~~~~~~~ In function ‘sprintf’, inlined from ‘nco_prn_att’ at nco_prn.c:714:63: /usr/include/bits/stdio2.h:30:10: warning: ‘__sprintf_chk’ argument 5 overlaps destination object ‘_1253’ [-Wrestrict] 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_prn.c: In function ‘nco_prn_att’: nco_prn.c:809:15: warning: ‘mbr_val’ may be used uninitialized [-Wmaybe-uninitialized] 809 | rcd=nco_inq_enum_ident(grp_id,att[idx].type,mbr_val,mbr_nm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:478:15: note: ‘mbr_val’ was declared here 478 | long long mbr_val; | ^~~~~~~ nco_prn.c: In function ‘nco_prn_var_val_trv’: nco_prn.c:2551:22: warning: ‘vln_val_dp’ may be used uninitialized [-Wmaybe-uninitialized] 2551 | val_dbl=vln_val_dp[vln_idx]; | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ nco_prn.c:2393:13: note: ‘vln_val_dp’ was declared here 2393 | double *vln_val_dp; | ^~~~~~~~~~ nco_prn.c:2533:29: warning: ‘vln_val_fp’ may be used uninitialized [-Wmaybe-uninitialized] 2533 | is_mss_val=!memcmp((char *)vln_val_fp+vln_idx*val_sz_byt,var->mss_val.vp,(size_t)val_sz_byt); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:2394:12: note: ‘vln_val_fp’ was declared here 2394 | float *vln_val_fp; | ^~~~~~~~~~ nco_prn.c:2566:78: warning: ‘vln_val_ip’ may be used uninitialized [-Wmaybe-uninitialized] 2566 | if(prn_flg->PRN_MSS_VAL_BLANK && var->has_mss_val) is_mss_val=!memcmp((char *)vln_val_ip+vln_idx*val_sz_byt,var->mss_val.vp,(size_t)val_sz_byt); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:2395:14: note: ‘vln_val_ip’ was declared here 2395 | nco_int *vln_val_ip; | ^~~~~~~~~~ nco_prn.c:2571:106: warning: ‘vln_val_sp’ may be used uninitialized [-Wmaybe-uninitialized] 2571 | case NC_SHORT: for(vln_idx=0;vln_idxtype,mbr_val,mbr_nm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:2391:15: note: ‘mbr_val’ was declared here 2391 | long long mbr_val; | ^~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_srm.lo nco_srm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_srm.c -o nco_srm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_s1d.lo nco_s1d.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_s1d.c -fPIC -DPIC -o .libs/nco_s1d.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_s1d.c -o nco_s1d.o >/dev/null 2>&1 nco_s1d.c: In function ‘nco_s1d_unpack’: nco_s1d.c:1831:45: warning: ‘fl_tpl’ may be used uninitialized [-Wmaybe-uninitialized] 1831 | if(FL_RTR_RMT_LCN && RM_RMT_FL_PST_PRC) (void)nco_fl_rm(fl_tpl); | ^~~~~~~~~~~~~~~~~~~~~~~ nco_s1d.c:175:9: note: ‘fl_tpl’ was declared here 175 | char *fl_tpl; /* [sng] Template file (contains horizontal grid) */ | ^~~~~~ nco_s1d.c:1632:15: warning: ‘idx_in’ may be used uninitialized [-Wmaybe-uninitialized] 1632 | if(idx_in == var_sz_in){ | ^ nco_s1d.c:234:10: note: ‘idx_in’ was declared here 234 | size_t idx_in; /* [idx] Input grid index */ | ^~~~~~ nco_s1d.c:500:12: warning: ‘has_clm’ may be used uninitialized [-Wmaybe-uninitialized] 500 | nco_bool has_clm; /* [flg] Variable contains column dimension */ | ^~~~~~~ In file included from /usr/include/stdio.h:974, from nco_s1d.h:17, from nco_s1d.c:10: In function ‘fprintf’, inlined from ‘nco_s1d_unpack’ at nco_s1d.c:1674:45: /usr/include/bits/stdio2.h:111:10: warning: ‘mrv_idx’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_s1d.c: In function ‘nco_s1d_unpack’: nco_s1d.c:1503:8: note: ‘mrv_idx’ was declared here 1503 | long mrv_idx; /* [idx] MRV index */ | ^~~~~~~ nco_s1d.c:2201:67: warning: ‘lnd_typ_vld_1st’ may be used uninitialized [-Wmaybe-uninitialized] 2201 | if(!flg_var_mpt && nco_dbg_lvl_get() >= nco_dbg_fl) (void)fprintf(fp_stdout,"%s: %s, idx_in = %ld, s1d_enm = %d = %s, lnd_typ_vld_1st = %d = %s, has_mec = %d\n",nco_prg_nm_get(),var_nm,idx_in,(int)nco_s1d_typ,nco_s1d_sng(nco_s1d_typ),lnd_typ_vld_1st,nco_lnd_typ_sng(lnd_typ_vld_1st),has_mec); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_s1d.c:904:7: note: ‘lnd_typ_vld_1st’ was declared here 904 | int lnd_typ_vld_1st; /* [enm] Landunit type of first valid (non-zero, non-missing) column|landunit|pft for variable */ | ^~~~~~~~~~~~~~~ nco_s1d.c:2236:43: warning: ‘grd_idx_out’ may be used uninitialized [-Wmaybe-uninitialized] 2236 | idx_out=pft_typ*grd_sz_out+grd_idx_out; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ nco_s1d.c:215:12: note: ‘grd_idx_out’ was declared here 215 | long int grd_idx_out; | ^~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_sph.lo nco_sph.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sph.c -fPIC -DPIC -o .libs/nco_sph.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sph.c -o nco_sph.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' nco_sph.c: In function ‘nco_sph_seg_int_old’: nco_sph.c:508:10: warning: variable ‘nx_ci’ set but not used [-Wunused-but-set-variable=] 508 | double nx_ci; | ^~~~~ nco_sph.c:506:10: warning: variable ‘nx3’ set but not used [-Wunused-but-set-variable=] 506 | double nx3; | ^~~ nco_sph.c:505:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable=] 505 | double nx2; | ^~~ nco_sph.c: In function ‘nco_sph_seg_parallel’: nco_sph.c:1426:10: warning: variable ‘nx3’ set but not used [-Wunused-but-set-variable=] 1426 | double nx3; | ^~~ nco_sph.c:1425:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable=] 1425 | double nx2; | ^~~ nco_sph.c:1424:10: warning: variable ‘nx1’ set but not used [-Wunused-but-set-variable=] 1424 | double nx1; | ^~~ nco_sph.c: In function ‘nco_sph_seg_vrt_int’: nco_sph.c:1839:10: warning: variable ‘nx_av’ set but not used [-Wunused-but-set-variable=] 1839 | double nx_av; | ^~~~~ nco_sph.c:1838:10: warning: variable ‘nx_ab’ set but not used [-Wunused-but-set-variable=] 1838 | double nx_ab; | ^~~~~ nco_sph.c: In function ‘nco_sph_is_convex’: nco_sph.c:2472:8: warning: variable ‘n1’ set but not used [-Wunused-but-set-variable=] 2472 | double n1; | ^~ nco_sph.c: In function ‘nco_rll_intersect’: nco_sph.c:3305:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable=] 3305 | double nx2; | ^~~ nco_sph.c:3304:10: warning: variable ‘nx1’ set but not used [-Wunused-but-set-variable=] 3304 | double nx1; | ^~~ In file included from /usr/include/stdio.h:974, from nco_sph.h:61, from nco_sph.c:49: In function ‘fprintf’, inlined from ‘nco_sph_seg_int_old’ at nco_sph.c:584:5: /usr/include/bits/stdio2.h:111:10: warning: ‘nx_ai’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_sph.c: In function ‘nco_sph_seg_int_old’: nco_sph.c:507:10: note: ‘nx_ai’ was declared here 507 | double nx_ai; | ^~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_lst.lo nco_var_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_lst.c -o nco_var_lst.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_avg.lo nco_var_avg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_avg.c -o nco_var_avg.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_scv.lo nco_var_scv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_scv.c -o nco_var_scv.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncbo.o ncbo.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_utl.lo nco_var_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_utl.c -o nco_var_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_rth.lo nco_var_rth.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_rth.c -o nco_var_rth.o >/dev/null 2>&1 nco_var_rth.c: In function ‘nco_var_sbt’: nco_var_rth.c:3726:25: warning: ‘tm_srt’ may be used uninitialized [-Wmaybe-uninitialized] 3726 | tm_drn=1.0e6*(tm_end-tm_srt)/CLOCKS_PER_SEC; | ~~~~~~~^~~~~~~~ nco_var_rth.c:3539:11: note: ‘tm_srt’ was declared here 3539 | clock_t tm_srt; | ^~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncecat.o ncecat.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' ncecat.c: In function ‘main’: ncecat.c:854:17: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation] 854 | gpe_arg=strncpy(gpe_arg,stb_srt_psn,strlen(stb_srt_psn)-sfx_lng); | ^ ncecat.c:854:45: note: length computed here 854 | gpe_arg=strncpy(gpe_arg,stb_srt_psn,strlen(stb_srt_psn)-sfx_lng); | ^~~~~~~~~~~~~~~~~~~ ncecat.c:812:30: warning: ‘%02d’ directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] 812 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~ ncecat.c:812:29: note: directive argument in the range [0, 2147483646] 812 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~~~ In file included from /usr/include/stdio.h:974, from ncecat.c:46: In function ‘sprintf’, inlined from ‘main’ at ncecat.c:812:9: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 3 and 11 bytes into a destination of size 3 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncflint.o ncflint.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncks.o ncks.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' ncks.c: In function ‘main’: ncks.c:1685:7: warning: ‘fl_lst_in’ may be used uninitialized [-Wmaybe-uninitialized] 1685 | if(fl_lst_in && fl_lst_abb == NULL) fl_lst_in=nco_sng_lst_free(fl_lst_in,fl_nbr); | ^ ncks.c:125:10: note: ‘fl_lst_in’ was declared here 125 | char **fl_lst_in; | ^~~~~~~~~ ncks.c:203:8: warning: ‘in_id_arr’ may be used uninitialized [-Wmaybe-uninitialized] 203 | int *in_id_arr; /* [id] netCDF file IDs used by OpenMP code */ | ^~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncpdq.o ncpdq.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncrename.o ncrename.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncwa.o ncwa.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' test -f ncap_lex.c || /bin/sh ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncap_utl.o ncap_utl.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncra.o ncra.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncap_lex.o ncap_lex.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' ncap_lex.c:2978:16: warning: ‘input’ defined but not used [-Wunused-function] 2978 | #else | ^ ncap_lex.l: In function ‘nco_yylex’: ncap_lex.l:611:34: warning: ‘%s’ directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 611 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In file included from /usr/include/stdio.h:974, from ncap_lex.c:277: In function ‘sprintf’, inlined from ‘nco_yylex’ at ncap_lex.l:611:13: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function ‘nco_yylex’: ncap_lex.l:587:36: warning: ‘%s’ directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 587 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function ‘sprintf’, inlined from ‘nco_yylex’ at ncap_lex.l:587:8: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function ‘nco_yylex’: ncap_lex.l:634:34: warning: ‘%s’ directive writing up to 255 bytes into a region of size 164 [-Wformat-overflow=] 634 | (void)sprintf(ncap_err_sng,"#Warning: unable to locate variable %s. So cannot create attribute %s",var_nm,yytext); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function ‘sprintf’, inlined from ‘nco_yylex’ at ncap_lex.l:634:13: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output 66 or more bytes (assuming 321) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_rgr.lo nco_rgr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rgr.c -fPIC -DPIC -o .libs/nco_rgr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rgr.c -o nco_rgr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' nco_rgr.c: In function ‘nco_ntp_vrt._omp_fn.0’: nco_rgr.c:3646:19: warning: ‘crd_out_mnt’ may be used uninitialized [-Wmaybe-uninitialized] 3646 | double *crd_out_mnt; /* Output vertical coordinate reversed if necessary to be monotonically increasing */ | ^~~~~~~~~~~ nco_rgr.c:3764:37: warning: ‘crd_in_mnt’ may be used uninitialized [-Wmaybe-uninitialized] 3764 | crd_in_mnt[in_idx]=crd_in[in_nbr-in_idx-1]; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:3645:19: note: ‘crd_in_mnt’ was declared here 3645 | double *crd_in_mnt; /* Input vertical coordinate reversed if necessary to be monotonically increasing */ | ^~~~~~~~~~ nco_rgr.c:3765:37: warning: ‘dat_in_mnt’ may be used uninitialized [-Wmaybe-uninitialized] 3765 | dat_in_mnt[in_idx]=dat_in[in_nbr-in_idx-1]; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:3647:19: note: ‘dat_in_mnt’ was declared here 3647 | double *dat_in_mnt; /* Input data (to be interpolated) reversed if necessary along with input grid */ | ^~~~~~~~~~ nco_rgr.c:3809:41: warning: ‘dat_out_mnt’ may be used uninitialized [-Wmaybe-uninitialized] 3809 | dat_out_mnt[out_idx]=mss_val_cmp_dbl; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ nco_rgr.c:3648:19: note: ‘dat_out_mnt’ was declared here 3648 | double *dat_out_mnt; /* Output data (interpolated) reversed if necessary along with output grid */ | ^~~~~~~~~~~ nco_rgr.c:3907:23: warning: ‘FIRST_WARNING_RHS’ may be used uninitialized [-Wmaybe-uninitialized] 3907 | if(FIRST_WARNING_RHS) (void)fprintf(fp_stdout,"%s: INFO %s geopotential height extrapolated toward/into surface using hypsometric equation with constant global mean virtual temperature = %g for variable %s\n",nco_prg_nm_get(),fnc_nm,tpt_vrt_avg,var_nm); | ^ nco_rgr.c:3714:20: note: ‘FIRST_WARNING_RHS’ was declared here 3714 | nco_bool FIRST_WARNING_RHS; /* [flg] First warning for RHS extrapolation */ | ^~~~~~~~~~~~~~~~~ nco_rgr.c:3829:23: warning: ‘FIRST_WARNING_LHS’ may be used uninitialized [-Wmaybe-uninitialized] 3829 | if(FIRST_WARNING_LHS) (void)fprintf(fp_stdout,"%s: INFO %s geopotential height extrapolated upward towards space using hypsometric equation with constant global mean virtual temperature = %g for variable %s\n",nco_prg_nm_get(),fnc_nm,tpt_vrt_avg,var_nm); | ^ nco_rgr.c:3713:20: note: ‘FIRST_WARNING_LHS’ was declared here 3713 | nco_bool FIRST_WARNING_LHS; /* [flg] First warning for LHS extrapolation */ | ^~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt._omp_fn.0’: nco_rgr.c:7427:32: warning: ‘tm_srt’ may be used uninitialized [-Wmaybe-uninitialized] 7427 | tm_drn=(float)(tm_end-tm_srt)/CLOCKS_PER_SEC; | ~~~~~~~^~~~~~~~ nco_rgr.c:6985:17: note: ‘tm_srt’ was declared here 6985 | clock_t tm_srt; /* [us] Microseconds at start */ | ^~~~~~ nco_rgr.c: In function ‘nco_rgr_ini’: nco_rgr.c:568:9: warning: ‘cnv_nbr’ may be used uninitialized [-Wmaybe-uninitialized] 568 | if(cnv_nbr != 4) cnv_nbr=sscanf(rgr_lst[rgr_var_idx].val,"%lf,%lf,%lf,%lf",&rgr->lon_wst,&rgr->lon_est,&rgr->lat_sth,&rgr->lat_nrt); | ^ nco_rgr.c:268:7: note: ‘cnv_nbr’ was declared here 268 | int cnv_nbr; /* [nbr] Number of elements converted by sscanf() */ | ^~~~~~~ nco_rgr.c: In function ‘nco_lat_wgt_gss’: nco_rgr.c:7632:13: warning: ‘sp’ may be used uninitialized [-Wmaybe-uninitialized] 7632 | (void)fprintf(stdout,"%s: ERROR %s reports convergence only %g after %d iterations for lat_idx = %d\n",nco_prg_nm_get(),fnc_nm,fabs(sp),itr_nbr_max,lat_idx); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:7597:10: note: ‘sp’ was declared here 7597 | double sp; // Current iteration latitude increment | ^~ nco_rgr.c: In function ‘nco_sph_plg_area’: nco_rgr.c:8380:5: warning: ‘b_idx’ may be used uninitialized [-Wmaybe-uninitialized] 8380 | if(b_idx) b_idx=(long *)nco_free(b_idx); | ^ nco_rgr.c:7840:9: note: ‘b_idx’ was declared here 7840 | long *b_idx; /* [idx] Point B 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c:8379:5: warning: ‘a_idx’ may be used uninitialized [-Wmaybe-uninitialized] 8379 | if(a_idx) a_idx=(long *)nco_free(a_idx); | ^ nco_rgr.c:7839:9: note: ‘a_idx’ was declared here 7839 | long *a_idx; /* [idx] Point A 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c:8381:5: warning: ‘c_idx’ may be used uninitialized [-Wmaybe-uninitialized] 8381 | if(c_idx) c_idx=(long *)nco_free(c_idx); | ^ nco_rgr.c:7841:9: note: ‘c_idx’ was declared here 7841 | long *c_idx; /* [idx] Point C 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4352:113: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 4352 | if(nco_rgr_mth_typ == nco_rgr_mth_nil) (void)fprintf(stdout,"%s: WARNING %s reports map global attribute %s = %s does not match SCRIP/ESMF conventions that support only values of \"Conservative\" and \"Bilinear\" for this attribute. Proceeding anyway...\n",nco_prg_nm_get(),fnc_nm,cnv_sng,att_val); | ^~ nco_rgr.c:6308:47: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 6 [-Wformat-overflow=] 6308 | (void)sprintf(dmn_nm_sng,"sng_lng_%d",dmn_sz_chr); | ^~ nco_rgr.c:6308:38: note: directive argument in the range [0, 2147483647] 6308 | (void)sprintf(dmn_nm_sng,"sng_lng_%d",dmn_sz_chr); | ^~~~~~~~~~~~ In file included from /usr/include/stdio.h:974, from nco_rgr.h:19, from nco_rgr.c:10: In function ‘sprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:6308:12: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 10 and 19 bytes into a destination of size 14 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4583:29: warning: ‘lon_psn_src’ may be used uninitialized [-Wmaybe-uninitialized] 4583 | lon_nbr_in=dmn_sz_in_int[lon_psn_src]; | ^ nco_rgr.c:4480:7: note: ‘lon_psn_src’ was declared here 4480 | int lon_psn_src; /* [idx] Ordinal position of longitude in rectangular source grid dimension-size array */ | ^~~~~~~~~~~ nco_rgr.c:4584:29: warning: ‘lat_psn_src’ may be used uninitialized [-Wmaybe-uninitialized] 4584 | lat_nbr_in=dmn_sz_in_int[lat_psn_src]; | ^ nco_rgr.c:4481:7: note: ‘lat_psn_src’ was declared here 4481 | int lat_psn_src; /* [idx] Ordinal position of latitude in rectangular source grid dimension-size array */ | ^~~~~~~~~~~ In function ‘fprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4665:11: /usr/include/bits/stdio2.h:111:10: warning: ‘col_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4572:8: note: ‘col_nbr_in’ was declared here 4572 | long col_nbr_in; /* [idx] Number of columns in source grid */ | ^~~~~~~~~~ In function ‘fprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4665:11: /usr/include/bits/stdio2.h:111:10: warning: ‘lon_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4573:8: note: ‘lon_nbr_in’ was declared here 4573 | long lon_nbr_in; /* [idx] Number of longitudes in rectangular source grid */ | ^~~~~~~~~~ In function ‘fprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4665:11: /usr/include/bits/stdio2.h:111:10: warning: ‘lat_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4574:8: note: ‘lat_nbr_in’ was declared here 4574 | long lat_nbr_in; /* [idx] Number of latitudes in rectangular source grid */ | ^~~~~~~~~~ In function ‘fprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:5076:47: /usr/include/bits/stdio2.h:111:10: warning: ‘idx_max_dvn’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:5056:8: note: ‘idx_max_dvn’ was declared here 5056 | long idx_max_dvn; /* [idx] Index of maximum deviation from 1.0 */ | ^~~~~~~~~~~ nco_rgr.c:5914:9: warning: ‘bnd_nm_out’ may be used uninitialized [-Wmaybe-uninitialized] 5914 | if(!strcmp(bnd_nm_out,bnd_tm_nm_out)){ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:5844:9: note: ‘bnd_nm_out’ was declared here 5844 | char *bnd_nm_out; | ^~~~~~~~~~ nco_rgr.c:6690:56: warning: ‘dmn_nbr_out’ may be used uninitialized [-Wmaybe-uninitialized] 6690 | dmn_nbr_max= dmn_nbr_in > dmn_nbr_out ? dmn_nbr_in : dmn_nbr_out; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ nco_rgr.c:5764:7: note: ‘dmn_nbr_out’ was declared here 5764 | int dmn_nbr_out; /* [nbr] Number of dimensions in output variable */ | ^~~~~~~~~~~ nco_rgr.c: In function ‘nco_grd_nfr’: nco_rgr.c:11276:7: warning: ‘lat_typ’ may be used uninitialized [-Wmaybe-uninitialized] 11276 | if(lat_typ == nco_grd_lat_nil){ | ^ nco_rgr.c:9857:23: note: ‘lat_typ’ was declared here 9857 | nco_grd_lat_typ_enm lat_typ; /* [enm] Latitude grid-type enum */ | ^~~~~~~ nco_rgr.c:10447:11: warning: ‘msk_unn.vp’ may be used uninitialized [-Wmaybe-uninitialized] 10447 | rcd=nco_get_vara(in_id,msk_id,dmn_srt,dmn_cnt,msk_unn.vp,msk_typ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:9863:11: note: ‘msk_unn.vp’ was declared here 9863 | ptr_unn msk_unn; | ^~~~~~~ nco_rgr.c:11263:51: warning: ‘lat_spn’ may be used uninitialized [-Wmaybe-uninitialized] 11263 | if(flg_s2n) lat_ctr_tst_fv=lat_ntf[0L]+lat_spn/(lat_nbr-1L); else lat_ctr_tst_fv=lat_ntf[0L]-lat_spn/(lat_nbr-1L); | ~~~~~~~^~~~~~~~~~~~~ nco_rgr.c:9754:10: note: ‘lat_spn’ was declared here 9754 | double lat_spn; /* [dgr] Latitude span */ | ^~~~~~~ nco_rgr.c: In function ‘nco_ntp_vrt’: nco_rgr.c:3210:47: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 6 [-Wformat-overflow=] 3210 | (void)sprintf(dmn_nm_sng,"sng_lng_%d",dmn_sz_chr); | ^~ nco_rgr.c:3210:38: note: directive argument in the range [0, 2147483647] 3210 | (void)sprintf(dmn_nm_sng,"sng_lng_%d",dmn_sz_chr); | ^~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘nco_ntp_vrt’ at nco_rgr.c:3210:12: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 10 and 19 bytes into a destination of size 14 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_ntp_vrt’: nco_rgr.c:1160:9: warning: ‘ps_nm_tpl’ may be used uninitialized [-Wmaybe-uninitialized] 1160 | rcd=nco_inq_varid_flg(tpl_id,ps_nm_tpl,&ps_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:1126:9: note: ‘ps_nm_tpl’ was declared here 1126 | char *ps_nm_tpl; /* [sng] Surface pressure field name in template file */ | ^~~~~~~~~ nco_rgr.c:1467:15: warning: ‘mss_val_cmp_dbl’ may be used uninitialized [-Wmaybe-uninitialized] 1467 | if(lt_out[idx_ttl] != mss_val_cmp_dbl) lt_sum[idx_fst+grd_idx]+=lt_out[idx_ttl]; | ^ nco_rgr.c:1369:10: note: ‘mss_val_cmp_dbl’ was declared here 1369 | double mss_val_cmp_dbl; /* Missing value for comparison to double precision values */ | ^~~~~~~~~~~~~~~ nco_rgr.c:2711:26: warning: ‘dmn_nbr_out’ may be used uninitialized [-Wmaybe-uninitialized] 2711 | for(dmn_idx=0;dmn_idx, antlr::ASTRefCount, fmc_cls&, ncoTree&)’: fmc_all_cls.cc:1965:60: warning: ‘__snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] 1965 | snprintf(units_new_sng,NCO_MAX_LEN_DATE_SNG,"days since %d-01-01 00:00:00",lcl_tm_sct.year); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:974, from /usr/include/c++/16/cstdio:47, from /usr/include/c++/16/ext/string_conversions.h:47, from /usr/include/c++/16/bits/basic_string.h:4465, from /usr/include/c++/16/string:57, from fmc_all_cls.hh:14, from fmc_all_cls.cc:10: In function ‘snprintf’, inlined from ‘mth2_cls::fnd(antlr::ASTRefCount, antlr::ASTRefCount, fmc_cls&, ncoTree&)’ at fmc_all_cls.cc:1965:24: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 28 and 38 bytes into a destination of size 27 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fmc_all_cls.cc: In member function ‘print_cls::fnd(antlr::ASTRefCount, antlr::ASTRefCount, fmc_cls&, ncoTree&)’: fmc_all_cls.cc:5634:15: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 5634 | strncpy(var->val.cp,cp,sz); | ^ fmc_all_cls.cc:5630:17: note: length computed here 5630 | sz=strlen(cp); | ~~~~~~^~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco++' g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o ncoTree.o ncoTree.cpp make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco++' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link g++ -std=gnu++11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ../nco/libnco.la -lantlr -lgsl -lgslcblas -lm -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -lgsl -lgslcblas -lm libtool: link: g++ -std=gnu++11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o ../nco/.libs/libnco.so -L/usr/lib64 -lantlr -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco++' make[3]: Nothing to be done for 'all-am'. Making all in man make[2]: Nothing to be done for 'all'. Making all in doc make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc' restore=: && backupdir=".am$$" && \ am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \ rm -rf $backupdir && mkdir $backupdir && \ if (/bin/sh '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/autobld/missing' makeinfo --version) >/dev/null 2>&1; then \ for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \ if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \ done; \ else :; fi && \ cd "$am__cwd"; \ if /bin/sh '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/autobld/missing' makeinfo -I . \ -o nco.info nco.texi; \ then \ rc=0; \ CDPATH="${ZSH_VERSION+.}:" && cd .; \ else \ rc=$?; \ CDPATH="${ZSH_VERSION+.}:" && cd . && \ $restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \ fi; \ rm -rf $backupdir; exit $rc make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc' + make -C doc html pdf make: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc' rm -rf nco.htp if /bin/sh '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/autobld/missing' makeinfo --html --ifinfo --no-split -I . \ -o nco.htp nco.texi; \ then \ rm -rf nco.html && mv nco.htp nco.html; \ else \ rm -rf nco.htp; exit 1; \ fi nco.texi:392: warning: no htmlxref.cnf entry found for `dir' TEXINPUTS="../autobld:$TEXINPUTS" \ MAKEINFO='/bin/sh '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/autobld/missing' makeinfo -I .' \ texi2dvi --pdf --batch -I . --build-dir=nco.t2p -o nco.pdf \ nco.texi This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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Overfull \hbox (1020.96211pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 7374--7374 [][] [88] [89] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7494--7494 [][] [90] Overfull \hbox (26.43913pt too wide) in paragraph at lines 7523--7523 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 7523--7523 [][] Underfull \hbox (badness 10000) in paragraph at lines 7557--7565 []@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@ textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex trm '[] or [91] [92] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7740--7740 [][] [93] [94] [95] [96] [97] [98] Overfull \hbox (55.18257pt too wide) in paragraph at lines 8262--8262 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8262--8262 [][] [99] [100] [101] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8402--8402 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8461--8461 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] [102] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8466--8466 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8468--8468 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8487--8487 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8490--8490 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8491--8491 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8492--8492 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [103] [104] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8659--8659 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8659--8659 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8659--8659 [][] [105] [106] [107] [108] [109] [110] 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[126] [127] [128] [129] [130] [131] Underfull \hbox (badness 10000) in paragraph at lines 10690--10697 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [132] [133] [134] [135] Overfull \hbox (55.18257pt too wide) in paragraph at lines 11153--11153 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [136] [137] [138] [139] [140] [141] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11564--11564 [][] [142] [143] [144] [145] [146] [147] [148] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12280--12280 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12287--12287 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [150] [151] [152] [153] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12666--12666 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12667--12667 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12668--12668 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12669--12669 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12677--12677 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [154] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12719--12719 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [155] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12794--12794 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [156] [157] [158] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12982--12982 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [159] [160] [161] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] [162] [163] Underfull \hbox (badness 6741) in paragraph at lines 13472--13517 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [164] [165] [166] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13886--13907 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [167] [168] [169] [170] [171] [172] [173] [174] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14389--14389 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14392--14392 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [175] [176] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14550--14550 [][] [177] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14590--14590 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14607--14607 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [178] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14636--14636 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [179] [180] [181] [182] Overfull \hbox (106.92076pt too wide) in paragraph at lines 14907--14907 [][] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15012--15012 [][] [184] Overfull \hbox (14.94176pt too wide) in paragraph at lines 15031--15031 [][] [185] [186] Overfull \hbox (83.92601pt too wide) in paragraph at lines 15202--15202 [][] [187] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15228--15228 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15240--15240 [][] [188] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15289--15289 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15289--15289 [][] [189] [190] [191] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15541--15541 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [192] [193] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15683--15683 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [194] [195] Underfull \hbox (badness 10000) in paragraph at lines 15809--15818 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15828--15828 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15870--15870 [][] [196] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15870--15870 [][] [197] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15959--15959 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15984--15984 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [198] [199] [200] [201] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16186--16186 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16203--16203 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [203] [204] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16344--16344 [][] [205] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16405--16405 [][] [206] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16488--16488 [][] [207] [208] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16614--16614 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16631--16631 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16664--16664 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [209] [210] [211] [212] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16948--16949 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16956--16957 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16960--16961 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16964--16965 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16968--16969 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16984--16985 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16989--16990 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 17007--17007 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 17008--17008 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 17015--17015 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 17040--17041 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17119--17120 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17120--17121 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17121--17122 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17122--17122 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17122--17123 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17131--17132 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17140--17141 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17141--17141 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17143--17144 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17144--17144 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17205--17205 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [213] [214] [215] [216] [217] [218] [219] Underfull \hbox (badness 10000) in paragraph at lines 17282--17284 []@texttt status=@textbf gsl[]fit[]linear [220] Underfull \hbox (badness 10000) in paragraph at lines 17295--17296 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17313--17314 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ Overfull \hbox (14.94176pt too wide) in paragraph at lines 17338--17338 [][] [221] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17365--17365 [][] [222] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17381--17381 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17382--17382 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17383--17383 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17390--17390 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17391--17391 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17392--17392 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [223] [224] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17498--17498 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17500--17500 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [225] [226] [227] [228] Underfull \hbox (badness 10000) in paragraph at lines 18023--18039 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [229] Underfull \hbox (badness 10000) in paragraph at lines 18083--18099 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18169--18179 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [230] [231] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18382--18382 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18382--18382 [][] [232] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18464--18464 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18470--18470 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [233] [234] [235] [236] [237] [238] [239] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19102--19102 [][] [240] [241] [242] [243] [244] [245] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19636--19636 [][] [246] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19656--19656 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19660--19660 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19664--19664 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19713--19713 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [247] [248] [249] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19929--19929 [][] [250] [251] [252] [253] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20302--20302 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20305--20305 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20306--20306 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20307--20307 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20316--20316 [][] [254] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20497--20497 [][] [255] [256] [257] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20771--20771 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20772--20772 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [258] [259] [260] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21041--21041 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 21043--21043 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21045--21045 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] [261] Underfull \hbox (badness 10000) in paragraph at lines 21086--21102 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21142--21142 [][] [262] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21187--21187 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [263] [264] Underfull \hbox (badness 10000) in paragraph at lines 21371--21371 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21372--21372 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21402--21402 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [265] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21408--21408 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21409--21409 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] [266] [267] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21548--21548 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21555--21555 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21557--21557 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [268] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21625--21625 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21631--21631 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21658--21658 [][] [269] [270] [271] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21885--21885 [][] [272] [273] [274] [275] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22197--22197 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22203--22203 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [276] [277] [278] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22444--22444 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [279] Overfull \hbox (43.68523pt too wide) in paragraph at lines 22470--22470 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr p@texttt [,[]]] [--gaa ...] [--gad @textttsl att@texttt [,[]]][] [280] [281] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22717--22717 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [282] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22764--22764 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22765--22765 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (37.93654pt too wide) in paragraph at lines 22769--22769 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga a ...] [--gad @textttsl att@texttt [,[]]] [--grp_xtr_var_xcl][] [283] [284] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22972--22972 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22973--22973 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22976--22976 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22977--22977 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [285] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23061--23061 []@texttt 1964-03-13T21:09:0.000000[] [286] [287] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] [288] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23244--23244 [][] [289] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] [290] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] [291] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] [292] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23594--23594 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23594--23594 [][] [293] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23760--23760 [][] [294] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23781--23781 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23795--23795 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23796--23796 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23797--23797 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23798--23798 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23799--23799 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23800--23800 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23801--23801 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [295] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23886--23886 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [296] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23929--23929 [][] [297] Overfull \hbox (549.89905pt too wide) in paragraph at lines 24032--24032 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 24032--24032 [][] [298] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24062--24062 [][] [299] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24166--24166 [][] [300] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24166--24166 [][] [301] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24330--24330 [][] [302] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24412--24412 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24415--24415 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24420--24420 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [303] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24540--24540 [][] [304] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24676--24676 [][] [305] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24719--24719 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24719--24719 [][] Underfull \hbox (badness 10000) in paragraph at lines 24734--24749 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24767--24767 [][] [306] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24844--24844 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24857--24857 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24865--24865 [][] [307] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24969--24969 [][] [308] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (997.96736pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] [309] Overfull \hbox (26.43913pt too wide) in paragraph at lines 25050--25050 []@texttt # Change values to be sure original values are not copied in followi ng step[] [310] [311] [312] [313] [314] Underfull \hbox (badness 10000) in paragraph at lines 25466--25471 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [315] Underfull \hbox (badness 10000) in paragraph at lines 25472--25478 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [316] [317] [318] [319] [320] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25856--25856 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25869--25869 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [321] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25926--25926 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [322] [323] [324] [325] [326] [327] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26416--26416 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [328] [329] Underfull \hbox (badness 6741) in paragraph at lines 26695--26706 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [330] [331] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26977--26977 [][] [332] Underfull \hbox (badness 10000) in paragraph at lines 27067--27069 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 27070--27075 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv [333] Underfull \hbox (badness 10000) in paragraph at lines 27079--27081 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 27085--27087 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [334] [335] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27260--27260 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27260--27260 [][] Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27275--27295 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . [336] Overfull \hbox (44.01453pt too wide) in paragraph at lines 27312--27312 [][] [337] [338] [339] [340] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27742--27742 [][] [341] [342] [343] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28054--28054 [][] [344] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28090--28090 [][] [345] [346] [347] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28381--28443 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28381--28443 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [348] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28499--28499 [][] [349] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28600--28600 [][] [350] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28647--28647 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28647--28647 [][] [351] [352] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28767--28767 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28788--28788 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [353] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28923--28923 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28924--28924 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [354] [355] [356] [357] [358] [359] Overfull \hbox (61.26059pt too wide) in paragraph at lines 29438--29438 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 29440--29440 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [360] [361] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29628--29628 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29628--29628 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29628--29628 [][] [362] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29691--29691 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29700--29700 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 29714--29714 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29829--29829 [][] [363] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] [364] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 29884--29884 [][] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29884--29884 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 29884--29884 [][] [365] [366] Underfull \hbox (badness 10000) in paragraph at lines 29970--29970 []@texttt ncremap --vrt_in=vrt.nc -- Underfull \hbox (badness 10000) in paragraph at lines 29971--29971 []@texttt ncremap --vrt_in=vrt.nc -- Overfull \hbox (15.27109pt too wide) in paragraph at lines 30001--30001 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 30002--30002 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] [367] [368] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30192--30192 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30193--30193 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [369] [370] [371] [372] [373] [374] [375] Overfull \hbox (187.40239pt too wide) in paragraph at lines 30745--30745 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 30745--30745 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30757--30757 [][] [376] Overfull \hbox (216.14583pt too wide) in paragraph at lines 30786--30786 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (5579.6715pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (1659.06645pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30831--30831 [][] [377] [378] [379] [380] [381] [382] Chapter 5 [383] [384] [385] [386] [387] Chapter 6 [388] [389] Chapter 7 [390] (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [391] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [392] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/cmb_fl_grp.sh [393] Overfull \hbox (32.18782pt too wide) in paragraph at lines 36--36 [][] 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(26.43913pt too wide) in paragraph at lines 5--5 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21--21 [][] [404]) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/ann_avg_grp.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 12--12 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15--15 [][] [405]) [406] (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/mcc.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 20--20 [][][][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21--21 [][][] [407] Overfull \hbox (72.42863pt too wide) in paragraph at lines 41--41 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 48--48 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 49--49 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 51--51 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 52--52 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wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [414] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [415] [416] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32286--32286 [][] Chapter 9 [417] [418] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] [419] [420] [421] [422] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32596--32596 [][] [423] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] [424] Chapter 10 [425] [426] (General Index) [427] [428] [429] [430] ) (see the transcript file for additional information) Output written on nco.pdf (434 pages, 1783855 bytes). Transcript written on nco.log. Moved nco.pdf to /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nco.pdf This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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paragraph at lines 7523--7523 [][] Underfull \hbox (badness 10000) in paragraph at lines 7557--7565 []@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@ textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex trm '[] or [89] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7740--7740 [][] [91] [92] [93] [94] [95] [96] Overfull \hbox (55.18257pt too wide) in paragraph at lines 8262--8262 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8262--8262 [][] [97] [98] [99] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8402--8402 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8461--8461 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] [100] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8466--8466 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8468--8468 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8487--8487 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8490--8490 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8491--8491 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8492--8492 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [101] [102] 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at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] [160] [161] Underfull \hbox (badness 6741) in paragraph at lines 13472--13517 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [162] [163] [164] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13886--13907 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [165] [166] [167] [168] [169] [170] [171] [172] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14389--14389 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14392--14392 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [173] [174] Overfull 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lines 15228--15228 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15240--15240 [][] [186] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15289--15289 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15289--15289 [][] [187] [188] [189] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15541--15541 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [190] [191] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15683--15683 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 15809--15818 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15828--15828 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15870--15870 [][] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15870--15870 [][] [195] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15959--15959 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15984--15984 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [196] [197] [198] [199] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16186--16186 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [200] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16203--16203 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [201] [202] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16344--16344 [][] [203] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16405--16405 [][] [204] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16488--16488 [][] [205] [206] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16614--16614 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16631--16631 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16664--16664 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [207] [208] [209] [210] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16948--16949 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16956--16957 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16960--16961 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16964--16965 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16968--16969 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16984--16985 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16989--16990 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 17007--17007 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 17008--17008 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 17015--17015 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 17040--17041 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17119--17120 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17120--17121 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17121--17122 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17122--17122 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17122--17123 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17131--17132 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17140--17141 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17141--17141 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17143--17144 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17144--17144 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17205--17205 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [211] [212] [213] [214] [215] [216] [217] Underfull \hbox (badness 10000) in paragraph at lines 17282--17284 []@texttt status=@textbf gsl[]fit[]linear [218] Underfull \hbox (badness 10000) in paragraph at lines 17295--17296 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17313--17314 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ Overfull \hbox (14.94176pt too wide) in paragraph at lines 17338--17338 [][] [219] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17365--17365 [][] [220] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17381--17381 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17382--17382 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17383--17383 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17390--17390 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17391--17391 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17392--17392 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [221] [222] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17498--17498 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17500--17500 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [223] [224] [225] [226] Underfull \hbox (badness 10000) in paragraph at lines 18023--18039 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [227] Underfull \hbox (badness 10000) in paragraph at lines 18083--18099 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18169--18179 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [228] [229] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18382--18382 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18382--18382 [][] [230] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18464--18464 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18470--18470 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [231] [232] [233] [234] [235] [236] [237] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19102--19102 [][] [238] [239] [240] [241] [242] [243] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19636--19636 [][] [244] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19656--19656 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19660--19660 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19664--19664 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19713--19713 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [245] [246] [247] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19929--19929 [][] [248] [249] [250] [251] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20302--20302 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20305--20305 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20306--20306 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20307--20307 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20316--20316 [][] [252] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20497--20497 [][] [253] [254] [255] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20771--20771 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20772--20772 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [256] [257] [258] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21041--21041 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 21043--21043 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21045--21045 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] [259] Underfull \hbox (badness 10000) in paragraph at lines 21086--21102 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21142--21142 [][] [260] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21187--21187 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [261] [262] Underfull \hbox (badness 10000) in paragraph at lines 21371--21371 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21372--21372 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21402--21402 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [263] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21408--21408 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21409--21409 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] [264] [265] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21548--21548 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21555--21555 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21557--21557 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [266] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21625--21625 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21631--21631 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21658--21658 [][] [267] [268] [269] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21885--21885 [][] [270] [271] [272] [273] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22197--22197 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22203--22203 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [274] [275] [276] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22444--22444 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [277] Overfull \hbox (43.68523pt too wide) in paragraph at lines 22470--22470 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr p@texttt [,[]]] [--gaa ...] [--gad @textttsl att@texttt [,[]]][] [278] [279] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22717--22717 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [280] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22764--22764 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22765--22765 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (37.93654pt too wide) in paragraph at lines 22769--22769 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga a ...] [--gad @textttsl att@texttt [,[]]] [--grp_xtr_var_xcl][] [281] [282] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22972--22972 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22973--22973 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22976--22976 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22977--22977 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [283] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23061--23061 []@texttt 1964-03-13T21:09:0.000000[] [284] [285] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] [286] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23244--23244 [][] [287] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] [288] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] [289] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] [290] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23594--23594 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23594--23594 [][] [291] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23760--23760 [][] [292] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23781--23781 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23795--23795 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23796--23796 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23797--23797 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23798--23798 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23799--23799 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23800--23800 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23801--23801 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [293] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23886--23886 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [294] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23929--23929 [][] [295] Overfull \hbox (549.89905pt too wide) in paragraph at lines 24032--24032 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 24032--24032 [][] [296] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24062--24062 [][] [297] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24166--24166 [][] [298] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24166--24166 [][] [299] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24330--24330 [][] [300] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24412--24412 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24415--24415 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24420--24420 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [301] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24540--24540 [][] [302] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24676--24676 [][] [303] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24719--24719 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24719--24719 [][] Underfull \hbox (badness 10000) in paragraph at lines 24734--24749 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24767--24767 [][] [304] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24844--24844 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24857--24857 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24865--24865 [][] [305] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24969--24969 [][] [306] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (997.96736pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] [307] Overfull \hbox (26.43913pt too wide) in paragraph at lines 25050--25050 []@texttt # Change values to be sure original values are not copied in followi ng step[] [308] [309] [310] [311] [312] Underfull \hbox (badness 10000) in paragraph at lines 25466--25471 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [313] Underfull \hbox (badness 10000) in paragraph at lines 25472--25478 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [314] [315] [316] [317] [318] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25856--25856 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25869--25869 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [319] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25926--25926 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [320] [321] [322] [323] [324] [325] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26416--26416 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [326] [327] Underfull \hbox (badness 6741) in paragraph at lines 26695--26706 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [328] [329] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26977--26977 [][] [330] Underfull \hbox (badness 10000) in paragraph at lines 27067--27069 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 27070--27075 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv [331] Underfull \hbox (badness 10000) in paragraph at lines 27079--27081 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 27085--27087 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [332] [333] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27260--27260 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27260--27260 [][] Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27275--27295 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . [334] Overfull \hbox (44.01453pt too wide) in paragraph at lines 27312--27312 [][] [335] [336] [337] [338] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27742--27742 [][] [339] [340] [341] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28054--28054 [][] [342] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28090--28090 [][] [343] [344] [345] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28381--28443 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28381--28443 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [346] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28499--28499 [][] [347] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28600--28600 [][] [348] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28647--28647 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28647--28647 [][] [349] [350] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28767--28767 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] 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wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [412] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [413] [414] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32286--32286 [][] Chapter 9 [415] [416] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] [417] [418] [419] [420] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32596--32596 [][] [421] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] [422] Chapter 10 [423] [424] (General Index) [425] [426] (./nco.cps [427] Overfull \hbox (37.49283pt too wide) in paragraph at lines 144--144 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] Overfull \hbox (32.76788pt too wide) in paragraph at lines 153--153 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [428] [429] [430] [431] [432] Overfull \hbox (37.49283pt too wide) in paragraph at lines 778--778 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443] [444] [445] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2181--2181 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2187--2187 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [446] [447] [448] [449]) [450] ) (see the transcript file for additional information) Output written on nco.pdf (458 pages, 2068545 bytes). Transcript written on nco.log. Moved nco.pdf to /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nco.pdf This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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paragraph at lines 7339--7339 [][] Overfull \hbox (101.17207pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (198.89977pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (101.17207pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (1020.96211pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 7374--7374 [][] [86] [87] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7494--7494 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7494--7494 [][] [88] Overfull \hbox (26.43913pt too wide) in paragraph at lines 7523--7523 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 7523--7523 [][] Underfull \hbox (badness 10000) in paragraph at lines 7557--7565 []@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@ textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex trm '[] or [89] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7740--7740 [][] [91] [92] [93] [94] [95] [96] Overfull \hbox (55.18257pt too wide) in paragraph at lines 8262--8262 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8262--8262 [][] [97] [98] [99] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8402--8402 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8461--8461 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] [100] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8466--8466 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8468--8468 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8487--8487 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8490--8490 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8491--8491 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8492--8492 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [101] [102] 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10033--10033 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10033--10033 [][] [121] [122] [123] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10245--10245 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10245--10245 [][] [124] [125] [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 10690--10697 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [130] [131] [132] [133] Overfull \hbox (55.18257pt too wide) in paragraph at lines 11153--11153 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [134] [135] [136] [137] [138] [139] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11564--11564 [][] [140] [141] [142] [143] [144] [145] [146] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12280--12280 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] [147] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12287--12287 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [148] [149] [150] [151] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12666--12666 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12667--12667 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12668--12668 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12669--12669 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12677--12677 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [152] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12719--12719 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [153] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12794--12794 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [154] [155] [156] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12982--12982 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [157] [158] [159] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] [160] [161] Underfull \hbox (badness 6741) in paragraph at lines 13472--13517 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [162] [163] [164] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13886--13907 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [165] [166] [167] [168] [169] [170] [171] [172] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14389--14389 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14392--14392 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [173] [174] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14550--14550 [][] [175] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14590--14590 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14607--14607 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [176] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14636--14636 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [177] [178] [179] [180] Overfull \hbox (106.92076pt too wide) in paragraph at lines 14907--14907 [][] [181] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15012--15012 [][] [182] Overfull \hbox (14.94176pt too wide) in paragraph at lines 15031--15031 [][] [183] [184] Overfull \hbox (83.92601pt too wide) in paragraph at lines 15202--15202 [][] [185] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15228--15228 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15240--15240 [][] [186] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15289--15289 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15289--15289 [][] [187] [188] [189] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15541--15541 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [190] [191] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15683--15683 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 15809--15818 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15828--15828 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15870--15870 [][] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15870--15870 [][] [195] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15959--15959 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15984--15984 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [196] [197] [198] [199] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16186--16186 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [200] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16203--16203 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [201] [202] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16344--16344 [][] [203] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16405--16405 [][] [204] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16488--16488 [][] [205] [206] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16614--16614 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16631--16631 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16664--16664 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [207] [208] [209] [210] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16948--16949 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16956--16957 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16960--16961 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16964--16965 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16968--16969 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16984--16985 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16989--16990 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 17007--17007 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 17008--17008 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 17015--17015 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 17040--17041 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17119--17120 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17120--17121 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17121--17122 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17122--17122 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17122--17123 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17131--17132 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17140--17141 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17141--17141 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17143--17144 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17144--17144 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17205--17205 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [211] [212] [213] [214] [215] [216] [217] Underfull \hbox (badness 10000) in paragraph at lines 17282--17284 []@texttt status=@textbf gsl[]fit[]linear [218] Underfull \hbox (badness 10000) in paragraph at lines 17295--17296 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17313--17314 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ Overfull \hbox (14.94176pt too wide) in paragraph at lines 17338--17338 [][] [219] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17365--17365 [][] [220] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17381--17381 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17382--17382 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17383--17383 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17390--17390 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17391--17391 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17392--17392 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [221] [222] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17498--17498 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17500--17500 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [223] [224] [225] [226] Underfull \hbox (badness 10000) in paragraph at lines 18023--18039 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [227] Underfull \hbox (badness 10000) in paragraph at lines 18083--18099 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18169--18179 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [228] [229] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18382--18382 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18382--18382 [][] [230] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18464--18464 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18470--18470 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [231] [232] [233] [234] [235] [236] [237] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19102--19102 [][] [238] [239] [240] [241] [242] [243] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19636--19636 [][] [244] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19656--19656 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19660--19660 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19664--19664 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19713--19713 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [245] [246] [247] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19929--19929 [][] [248] [249] [250] [251] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20302--20302 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20305--20305 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20306--20306 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20307--20307 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20316--20316 [][] [252] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20497--20497 [][] [253] [254] [255] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20771--20771 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20772--20772 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [256] [257] [258] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21041--21041 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 21043--21043 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21045--21045 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] [259] Underfull \hbox (badness 10000) in paragraph at lines 21086--21102 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21142--21142 [][] [260] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21187--21187 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [261] [262] Underfull \hbox (badness 10000) in paragraph at lines 21371--21371 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21372--21372 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21402--21402 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [263] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21408--21408 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21409--21409 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] [264] [265] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21548--21548 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21555--21555 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21557--21557 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [266] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21625--21625 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21631--21631 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21658--21658 [][] [267] [268] [269] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21885--21885 [][] [270] [271] [272] [273] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22197--22197 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22203--22203 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [274] [275] [276] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22444--22444 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [277] Overfull \hbox (43.68523pt too wide) in paragraph at lines 22470--22470 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr p@texttt [,[]]] [--gaa ...] [--gad @textttsl att@texttt [,[]]][] [278] [279] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22717--22717 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [280] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22764--22764 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22765--22765 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (37.93654pt too wide) in paragraph at lines 22769--22769 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga a ...] [--gad @textttsl att@texttt [,[]]] [--grp_xtr_var_xcl][] [281] [282] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22972--22972 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22973--22973 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22976--22976 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22977--22977 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [283] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23061--23061 []@texttt 1964-03-13T21:09:0.000000[] [284] [285] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] [286] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23244--23244 [][] [287] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] [288] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] [289] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] [290] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23594--23594 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23594--23594 [][] [291] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23760--23760 [][] [292] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23781--23781 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23795--23795 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23796--23796 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23797--23797 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23798--23798 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23799--23799 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23800--23800 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23801--23801 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [293] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23886--23886 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [294] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23929--23929 [][] [295] Overfull \hbox (549.89905pt too wide) in paragraph at lines 24032--24032 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 24032--24032 [][] [296] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24062--24062 [][] [297] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24166--24166 [][] [298] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24166--24166 [][] [299] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24330--24330 [][] [300] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24412--24412 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24415--24415 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24420--24420 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [301] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24540--24540 [][] [302] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24676--24676 [][] [303] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24719--24719 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24719--24719 [][] Underfull \hbox (badness 10000) in paragraph at lines 24734--24749 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24767--24767 [][] [304] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24844--24844 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24857--24857 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24865--24865 [][] [305] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24969--24969 [][] [306] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (997.96736pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] [307] Overfull \hbox (26.43913pt too wide) in paragraph at lines 25050--25050 []@texttt # Change values to be sure original values are not copied in followi ng step[] [308] [309] [310] [311] [312] Underfull \hbox (badness 10000) in paragraph at lines 25466--25471 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [313] Underfull \hbox (badness 10000) in paragraph at lines 25472--25478 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [314] [315] [316] [317] [318] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25856--25856 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25869--25869 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [319] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25926--25926 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [320] [321] [322] [323] [324] [325] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26416--26416 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [326] [327] Underfull \hbox (badness 6741) in paragraph at lines 26695--26706 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [328] [329] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26977--26977 [][] [330] Underfull \hbox (badness 10000) in paragraph at lines 27067--27069 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 27070--27075 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv [331] Underfull \hbox (badness 10000) in paragraph at lines 27079--27081 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 27085--27087 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [332] [333] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27260--27260 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27260--27260 [][] Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27275--27295 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . [334] Overfull \hbox (44.01453pt too wide) in paragraph at lines 27312--27312 [][] [335] [336] [337] [338] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27742--27742 [][] [339] [340] [341] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28054--28054 [][] [342] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28090--28090 [][] [343] [344] [345] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28381--28443 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28381--28443 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [346] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28499--28499 [][] [347] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28600--28600 [][] [348] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28647--28647 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28647--28647 [][] [349] [350] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28767--28767 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28788--28788 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [351] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28923--28923 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28924--28924 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [352] [353] [354] [355] [356] [357] Overfull \hbox (61.26059pt too wide) in paragraph at lines 29438--29438 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 29440--29440 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [358] [359] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29628--29628 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29628--29628 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29628--29628 [][] [360] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29691--29691 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29700--29700 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 29714--29714 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29829--29829 [][] [361] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] [362] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 29884--29884 [][] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29884--29884 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 29884--29884 [][] [363] [364] Underfull \hbox (badness 10000) in paragraph at lines 29970--29970 []@texttt ncremap --vrt_in=vrt.nc -- Underfull \hbox (badness 10000) in paragraph at lines 29971--29971 []@texttt ncremap --vrt_in=vrt.nc -- Overfull \hbox (15.27109pt too wide) in paragraph at lines 30001--30001 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 30002--30002 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] [365] [366] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30192--30192 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30193--30193 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [367] [368] [369] [370] [371] [372] [373] Overfull \hbox (187.40239pt too wide) in paragraph at lines 30745--30745 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 30745--30745 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30757--30757 [][] [374] Overfull \hbox (216.14583pt too wide) in paragraph at lines 30786--30786 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (5579.6715pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (1659.06645pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30831--30831 [][] [375] [376] [377] [378] [379] [380] Chapter 5 [381] [382] [383] [384] [385] Chapter 6 [386] [387] Chapter 7 [388] (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [389] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [390] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/cmb_fl_grp.sh [391] Overfull \hbox (32.18782pt too wide) in paragraph at lines 36--36 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 49--49 [][] [392] Overfull \hbox (43.6852pt too wide) in paragraph at lines 51--51 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 52--52 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 55--55 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 59--59 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 64--64 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 72--72 [][] [393]) [394] (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/glb_avg.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 3--3 [][] [395] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14--14 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 19--19 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 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(26.43913pt too wide) in paragraph at lines 5--5 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21--21 [][] [402]) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/ann_avg_grp.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 12--12 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15--15 [][] [403]) [404] (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/mcc.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 20--20 [][][][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21--21 [][][] [405] Overfull \hbox (72.42863pt too wide) in paragraph at lines 41--41 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 48--48 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 49--49 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 51--51 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 52--52 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 61--61 [][][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 63--63 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 68--68 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 71--71 [][] [406] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 77--77 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/mcc_grp.sh [407]) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/rgr.sh [408] Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 6--6 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10--10 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 27--27 [][][][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 28--28 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 33--33 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 37--37 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/bi_interp.nco [409] Overfull \hbox (14.94176pt too wide) in paragraph at lines 34--34 [][][][] [410] Overfull \hbox (20.69044pt too wide) in paragraph at lines 61--61 [][][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/add_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 5--5 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 6--6 [][][][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 8--8 [][][] [411] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [412] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [413] [414] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32286--32286 [][] Chapter 9 [415] [416] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] [417] [418] [419] [420] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32596--32596 [][] [421] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32596--32596 [][] [422] Chapter 10 [423] [424] (General Index) [425] [426] (./nco.cps [427] Overfull \hbox (37.49283pt too wide) in paragraph at lines 144--144 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] Overfull \hbox (32.76788pt too wide) in paragraph at lines 153--153 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [428] [429] [430] [431] [432] Overfull \hbox (37.49283pt too wide) in paragraph at lines 778--778 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443] [444] [445] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2181--2181 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2187--2187 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [446] [447] [448] [449]) [450] ) (see the transcript file for additional information) Output written on nco.pdf (458 pages, 2068770 bytes). Transcript written on nco.log. Moved nco.pdf to /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nco.pdf make: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.XFv5F7 + umask 022 + cd /builddir/build/BUILD/nco-5.3.5-build + '[' /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT ++ dirname /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT + mkdir -p /builddir/build/BUILD/nco-5.3.5-build + mkdir /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.3.5 + /usr/bin/make install DESTDIR=/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT 'INSTALL=/usr/bin/install -p' Making install in data make[1]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin' /usr/bin/install -p ncclimo ncremap ncz2psx ncchecker '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin' make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/data' Making install in src make[1]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src' Making install in nco make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p libnco.la '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64' libtool: install: /usr/bin/install -p .libs/libnco-5.3.5.so /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64/libnco-5.3.5.so libtool: install: (cd /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64 && { ln -s -f libnco-5.3.5.so libnco.so || { rm -f libnco.so && ln -s libnco-5.3.5.so libnco.so; }; }) libtool: install: /usr/bin/install -p .libs/libnco.lai /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64/libnco.la libtool: install: /usr/bin/install -p .libs/libnco.a /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64/libnco.a libtool: install: chmod 644 /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64/libnco.a libtool: install: ranlib /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64/libnco.a libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin' libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncatted /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncatted libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncbo /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncbo libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncecat /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncecat libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncflint /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncflint libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncks /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncks libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncpdq /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncpdq libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncra /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncra libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncrename /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncrename libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncwa /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncwa /usr/bin/make install-exec-hook make[4]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' cd /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff) cd /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea) cd /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces) cd /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat) make[4]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco' Making install in nco++ make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco++' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco++' /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncap2 '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin' libtool: warning: '../nco/libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncap2 /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncap2 make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco++' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src/nco++' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src' make[3]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/src' Making install in man make[1]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/man' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/man' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/man/man1' /usr/bin/install -p -m 644 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncpdq.1 ncra.1 ncrcat.1 ncremap.1 ncrename.1 ncwa.1 ncz2psx.1 ncchecker.1 '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/man/man1' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/man' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/man' Making install in doc make[1]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/info' /usr/bin/install -p -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 ./nco.info-5 '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/info' install-info --info-dir='/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/info' '/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/info/nco.info' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc' make[1]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5' make[2]: Entering directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5' + rm /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64/libnco.la + rm -f /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/info/dir + chrpath -d -k /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncap2 /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncatted /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncbo /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncchecker /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncclimo /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncdiff /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncea /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncecat /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/nces /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncflint /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncks /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncpdq /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncra /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncrcat /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncremap /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncrename /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncwa /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncz2psx `/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncchecker' probably isn't an ELF file. elf_open: Exec format error `/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncclimo' probably isn't an ELF file. elf_open: Exec format error `/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncremap' probably isn't an ELF file. elf_open: Exec format error `/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/bin/ncz2psx' probably isn't an ELF file. elf_open: Exec format error + : + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 5.3.5-1.fc44 --unique-debug-suffix -5.3.5-1.fc44.x86_64 --unique-debug-src-base nco-5.3.5-1.fc44.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 --remove-section .gnu.build.attributes -S debugsourcefiles.list /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5 find-debuginfo: starting Extracting debug info from 12 files DWARF-compressing 11 files sepdebugcrcfix: Updated 11 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/nco-5.3.5-1.fc44.x86_64 cpio: src/nco/ncap_yacc.h: Cannot stat: No such file or directory cpio: src/nco/ncap_yacc.y: Cannot stat: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + COMPRESS='gzip -9 -n' + COMPRESS_EXT=.gz + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/ncchecker from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncz2psx from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncremap from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncclimo from /usr/bin/env bash to #!/usr/bin/bash + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-det --brp -j4 /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/lib64/libnco.a: replacing with normalized version Scanned 20 directories and 209 files, processed 24 inodes, 1 modified (1 replaced + 0 rewritten), 0 unsupported format, 0 errors + /usr/bin/linkdupes --brp /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr Scanned 19 directories and 209 files, considered 204 files, read 0 files, linked 0 files, 0 errors sum of sizes of linked files: 0 bytes Reading /builddir/build/BUILD/nco-5.3.5-build/SPECPARTS/rpm-debuginfo.specpart Processing files: nco-5.3.5-1.fc44.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.X6sZsE + umask 022 + cd /builddir/build/BUILD/nco-5.3.5-build + cd nco-5.3.5 + DOCDIR=/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/README /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/README.md /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/rtfm.txt /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nco.html /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nco.pdf /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nco.css /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/index.shtml /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/TODO /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/ChangeLog /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nco.png /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nco_news.shtml /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/nsf.png /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/doc/nco + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.mE1LiD + umask 022 + cd /builddir/build/BUILD/nco-5.3.5-build + cd nco-5.3.5 + LICENSEDIR=/builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/licenses/nco + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/licenses/nco + cp -pr /builddir/build/BUILD/nco-5.3.5-build/nco-5.3.5/doc/LICENSE /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT/usr/share/licenses/nco + RPM_EC=0 ++ jobs -p + exit 0 Provides: libnco-5.3.5.so()(64bit) nco = 5.3.5-1.fc44 nco(x86-64) = 5.3.5-1.fc44 Requires(interp): /sbin/ldconfig /sbin/ldconfig Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /sbin/ldconfig Requires(postun): /sbin/ldconfig Requires: /usr/bin/bash glibc >= 2.42.9000-17 libatomic.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcurl.so.4()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.28()(64bit) libgslcblas.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libm.so.6(GLIBC_2.38)(64bit) libm.so.6(GLIBC_2.43)(64bit) libnco-5.3.5.so()(64bit) libnetcdf.so.22()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libudunits2.so.0()(64bit) rtld(GNU_HASH) Processing files: nco-devel-5.3.5-1.fc44.x86_64 Provides: nco-devel = 5.3.5-1.fc44 nco-devel(x86-64) = 5.3.5-1.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-static-5.3.5-1.fc44.x86_64 Provides: nco-static = 5.3.5-1.fc44 nco-static(x86-64) = 5.3.5-1.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-debugsource-5.3.5-1.fc44.x86_64 Provides: nco-debugsource = 5.3.5-1.fc44 nco-debugsource(x86-64) = 5.3.5-1.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-debuginfo-5.3.5-1.fc44.x86_64 Provides: debuginfo(build-id) = 0cc364b731e16a45a152cabca78a703845559f54 debuginfo(build-id) = 333c6f1d91fb734318baf4efb42079c102cc7c50 debuginfo(build-id) = 3c6fa9247b6fd91b70bfe6289b1c7c871c25b665 debuginfo(build-id) = 4a10fa22092e0cba3fa69e97d0058973c07fee5a debuginfo(build-id) = 63770488b78b130b3aa022cbb086c4c77e588ae0 debuginfo(build-id) = a6388cf6430f641b8761646581fc743df84e2915 debuginfo(build-id) = c17c1a2b97afc8fac8c07a471df498801a20ab4f debuginfo(build-id) = cfbd5be122e7644c8b6b547715984412e2726c9a debuginfo(build-id) = f14dac76f3c6f92b2d180e657b762297bacff982 debuginfo(build-id) = f7a46fdf1bbd8aebdfd189e914a9645abf532447 debuginfo(build-id) = fc26008be3fd4bea388318e5ca216d71ee501dfa libnco-5.3.5.so-5.3.5-1.fc44.x86_64.debug()(64bit) nco-debuginfo = 5.3.5-1.fc44 nco-debuginfo(x86-64) = 5.3.5-1.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(x86-64) = 5.3.5-1.fc44 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/nco-5.3.5-build/BUILDROOT Wrote: /builddir/build/RPMS/nco-debugsource-5.3.5-1.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/nco-devel-5.3.5-1.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/nco-static-5.3.5-1.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/nco-5.3.5-1.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/nco-debuginfo-5.3.5-1.fc44.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.GlDDAJ + umask 022 + cd /builddir/build/BUILD/nco-5.3.5-build + test -d /builddir/build/BUILD/nco-5.3.5-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/nco-5.3.5-build + rm -rf /builddir/build/BUILD/nco-5.3.5-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild nco-5.3.5-1.fc44.src.rpm Finish: build phase for nco-5.3.5-1.fc44.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1767063830.861866/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/nco-5.3.5-1.fc44.src.rpm) Config(child) 2 minutes 59 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "nco-debugsource", "epoch": null, "version": "5.3.5", "release": "1.fc44", "arch": "x86_64" }, { "name": "nco-devel", "epoch": null, "version": "5.3.5", "release": "1.fc44", "arch": "x86_64" }, { "name": "nco-static", "epoch": null, "version": "5.3.5", "release": "1.fc44", "arch": "x86_64" }, { "name": "nco-debuginfo", "epoch": null, "version": "5.3.5", "release": "1.fc44", "arch": "x86_64" }, { "name": "nco", "epoch": null, "version": "5.3.5", "release": "1.fc44", "arch": "src" }, { "name": "nco", "epoch": null, "version": "5.3.5", "release": "1.fc44", "arch": "x86_64" } ] } RPMResults finished