libNuML 1.1.1
Library for reading / writing NuML documents
|
This is the complete list of members for NUMLDocument, including all inherited members.
accept(NUMLVisitor &v) const | NUMLDocument | virtual |
appendAnnotation(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) | NMBase | virtual |
appendAnnotation(const std::string &annotation) | NMBase | virtual |
appendNotes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *notes) | NMBase | |
appendNotes(const std::string ¬es) | NMBase | |
checkAnnotation() | NMBase | protected |
checkDefaultNamespace(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces *xmlns, const std::string &elementName) | NMBase | protected |
checkNUMLListPopulated(NMBase *object) | NMBase | protected |
checkOrderAndLogError(NMBase *object, int expected) | NMBase | protected |
checkXHTML(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *) | NMBase | protected |
clone() const | NUMLDocument | virtual |
conversion_errors(unsigned int errors) | NUMLDocument | protected |
createObject(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NUMLDocument | protectedvirtual |
createOntologyTerm() | NUMLDocument | |
createResultComponent() | NUMLDocument | |
getAncestorOfType(NUMLTypeCode_t type) | NMBase | |
getAnnotation() const | NMBase | |
getAnnotationString() const | NMBase | |
getColumn() const | NMBase | |
getDefaultLevel() | NUMLDocument | static |
getDefaultVersion() | NUMLDocument | static |
getElementName() const | NUMLDocument | virtual |
getElementPosition() const | NUMLDocument | virtual |
getError(unsigned int n) const | NUMLDocument | |
getErrorLog() | NUMLDocument | |
getHasBeenDeleted() | NMBase | private |
getId() const | NMBase | virtual |
getLevel() const | NMBase | |
getLine() const | NMBase | |
getMetaId() const | NMBase | |
getMetaId() | NMBase | |
getName() const | NMBase | virtual |
getNamespaces() const | NUMLDocument | virtual |
getNotes() const | NMBase | |
getNotesString() const | NMBase | |
getNumErrors() const | NUMLDocument | |
getNUMLDocument() const | NMBase | |
getNUMLDocument() | NMBase | |
getNUMLNamespaces() const | NMBase | |
getNumOntologyTerms() const | NUMLDocument | |
getNumResultComponents() const | NUMLDocument | |
getOntologyTerms() | NUMLDocument | |
getOntologyTerms() const | NUMLDocument | |
getParentNUMLObject() | NMBase | |
getResultComponent(unsigned int index) | NUMLDocument | |
getResultComponents() | NUMLDocument | |
getResultComponents() const | NUMLDocument | |
getTypeCode() const | NUMLDocument | virtual |
getVersion() const | NMBase | |
hasRequiredAttributes() const | NMBase | virtual |
hasRequiredElements() const | NMBase | virtual |
hasStrictSBO() | NUMLDocument | protected |
hasStrictUnits() | NUMLDocument | protected |
hasValidLevelVersionNamespaceCombination() | NMBase | |
isSetAnnotation() const | NMBase | |
isSetMetaId() const | NMBase | |
isSetName() const | NMBase | |
isSetNotes() const | NMBase | |
logEmptyString(std::string attribute, const unsigned int level, const unsigned int version, std::string element) | NMBase | protected |
logError(unsigned int id, const unsigned int level=2, const unsigned int version=3, const std::string &details="") | NMBase | protected |
logUnknownAttribute(std::string attribute, const unsigned int level, const unsigned int version, const std::string element) | NMBase | protected |
logUnknownElement(const std::string element, const unsigned int level, const unsigned int version) | NMBase | protected |
mAnnotation | NMBase | protected |
mApplicableValidators | NUMLDocument | protected |
mApplicableValidatorsForConversion | NUMLDocument | protected |
mColumn | NMBase | protected |
mDept | NMBase | protected |
mEmptyString | NMBase | protected |
mErrorLog | NUMLDocument | protected |
mHasBeenDeleted | NMBase | protected |
mId | NMBase | protected |
mLevel | NUMLDocument | protected |
mLine | NMBase | protected |
mMetaId | NMBase | protected |
mName | NMBase | protected |
mNotes | NMBase | protected |
mNUML | NMBase | protected |
mNUMLNamespaces | NMBase | protected |
mOntologyTerms | NUMLDocument | protected |
mParentNUMLObject | NMBase | protected |
mResultComponents | NUMLDocument | protected |
mVersion | NUMLDocument | protected |
NMBase | NUMLDocument | friend |
NMBase::NMBase(const std::string &id="", const std::string &name="") | NMBase | protected |
NMBase::NMBase(unsigned int level, unsigned int version) | NMBase | protected |
NMBase::NMBase(NUMLNamespaces *numlns) | NMBase | protected |
NMBase::NMBase(const NMBase &orig) | NMBase | protected |
NUMLDocument(unsigned int level=0, unsigned int version=0) | NUMLDocument | |
NUMLDocument(const NUMLDocument &rhs) | NUMLDocument | |
NUMLReader | NUMLDocument | friend |
operator=(const NMBase &orig) | NMBase | |
printErrors(std::ostream &stream=std::cerr) const | NUMLDocument | |
read(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NMBase | |
readAnnotation(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NMBase | private |
readAttributes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLAttributes &attributes) | NUMLDocument | protectedvirtual |
readNotes(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NMBase | private |
readOtherXML(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NMBase | protectedvirtual |
removeTopLevelAnnotationElement(const std::string elementName, const std::string elementURI="") | NMBase | |
replaceTopLevelAnnotationElement(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) | NMBase | |
replaceTopLevelAnnotationElement(const std::string &annotation) | NMBase | |
setAnnotation(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) | NMBase | virtual |
setAnnotation(const std::string &annotation) | NMBase | virtual |
setId(const std::string &sid) | NMBase | virtual |
setLevelAndVersion(unsigned int level, unsigned int version, bool strict=true) | NUMLDocument | |
setMetaId(const std::string &metaid) | NMBase | |
setNamespaces(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces *xmlns) | NMBase | |
setNMBaseFields(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLToken &element) | NMBase | private |
setNotes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *notes) | NMBase | |
setNotes(const std::string ¬es, bool addXHTMLMarkup=false) | NMBase | |
setNUMLDocument(NUMLDocument *d) | NUMLDocument | virtual |
setNUMLNamespaces(NUMLNamespaces *numlns) | NMBase | |
setParentNUMLObject(NMBase *sb) | NUMLDocument | virtual |
syncAnnotation() | NMBase | |
toNUML() | NMBase | |
unsetAnnotation() | NMBase | |
unsetMetaId() | NMBase | |
unsetNotes() | NMBase | |
write(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) const | NMBase | |
writeAttributes(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) const | NUMLDocument | protectedvirtual |
writeElements(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) const | NUMLDocument | virtual |
writeXMLNS(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) const | NMBase | protectedvirtual |
~NMBase() | NMBase | virtual |
~NUMLDocument() | NUMLDocument | virtual |