libNuML 1.1.1
Library for reading / writing NuML documents
AtomicDescription Member List

This is the complete list of members for AtomicDescription, including all inherited members.

accept(NUMLVisitor &v) constAtomicDescriptionvirtual
append(const NMBase *item)NUMLList
appendAndOwn(NMBase *item)NUMLList
appendAnnotation(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation)NMBasevirtual
appendAnnotation(const std::string &annotation)NMBasevirtual
appendNotes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *notes)NMBase
appendNotes(const std::string &notes)NMBase
AtomicDescription(unsigned int level, unsigned int version)AtomicDescription
AtomicDescription(NUMLNamespaces *numlns)AtomicDescription
AtomicDescription()AtomicDescription
checkAnnotation()NMBaseprotected
checkDefaultNamespace(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces *xmlns, const std::string &elementName)NMBaseprotected
checkNUMLListPopulated(NMBase *object)NMBaseprotected
checkOrderAndLogError(NMBase *object, int expected)NMBaseprotected
checkXHTML(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *)NMBaseprotected
clear(bool doDelete=true)NUMLList
clone() constAtomicDescriptionvirtual
createAtomicDescription()DimensionDescription
createCompositeDescription()DimensionDescription
createObject(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream)DimensionDescriptionprotectedvirtual
createTupleDescription()DimensionDescription
DimensionDescription()DimensionDescription
DimensionDescription(unsigned int level, unsigned int version)DimensionDescription
DimensionDescription(NUMLNamespaces *numlns)DimensionDescription
get(unsigned int n)DimensionDescriptionvirtual
get(unsigned int n) constDimensionDescriptionvirtual
get(const std::string &sid)DimensionDescriptionvirtual
get(const std::string &sid) constDimensionDescriptionvirtual
getAncestorOfType(NUMLTypeCode_t type)NMBase
getAnnotation() constNMBase
getAnnotationString() constNMBase
getColumn() constNMBase
getElementName() constAtomicDescriptionvirtual
getElementPosition() constDimensionDescriptionvirtual
getErrorLog()NMBaseprotected
getHasBeenDeleted()NMBaseprivate
getId() constAtomicDescriptionvirtual
getItemTypeCode() constDimensionDescriptionvirtual
getLevel() constNMBase
getLine() constNMBase
getMetaId() constNMBase
getMetaId()NMBase
getName() constAtomicDescriptionvirtual
getNamespaces() constNMBasevirtual
getNotes() constNMBase
getNotesString() constNMBase
getNUMLDocument() constNMBase
getNUMLDocument()NMBase
getNUMLNamespaces() constNMBase
getOntologyTerm() constAtomicDescription
getParentNUMLObject()NMBase
getTypeCode() constAtomicDescriptionvirtual
getValueType() constAtomicDescription
getVersion() constNMBase
hasRequiredAttributes() constNMBasevirtual
hasRequiredElements() constNMBasevirtual
hasValidLevelVersionNamespaceCombination()NMBase
isSetAnnotation() constNMBase
isSetMetaId() constNMBase
isSetName() constNMBase
isSetNotes() constNMBase
logEmptyString(std::string attribute, const unsigned int level, const unsigned int version, std::string element)NMBaseprotected
logError(unsigned int id, const unsigned int level=2, const unsigned int version=3, const std::string &details="")NMBaseprotected
logUnknownAttribute(std::string attribute, const unsigned int level, const unsigned int version, const std::string element)NMBaseprotected
logUnknownElement(const std::string element, const unsigned int level, const unsigned int version)NMBaseprotected
mAnnotationNMBaseprotected
mColumnNMBaseprotected
mDeptNMBaseprotected
mEmptyStringNMBaseprotected
mHasBeenDeletedNMBaseprotected
mIdAtomicDescriptionprotected
mItemsNUMLListprotected
mLineNMBaseprotected
mMetaIdNMBaseprotected
mNameAtomicDescriptionprotected
mNotesNMBaseprotected
mNUMLNMBaseprotected
mNUMLNamespacesNMBaseprotected
mOntologyTermAtomicDescriptionprotected
mParentNUMLObjectNMBaseprotected
mValueTypeAtomicDescriptionprotected
NMBase(const std::string &id="", const std::string &name="")NMBaseprotected
NMBase(unsigned int level, unsigned int version)NMBaseprotected
NMBase(NUMLNamespaces *numlns)NMBaseprotected
NMBase(const NMBase &orig)NMBaseprotected
NUMLList(unsigned int level, unsigned int version)NUMLList
NUMLList(NUMLNamespaces *numlns)NUMLList
NUMLList()NUMLList
NUMLList(const NUMLList &orig)NUMLList
operator=(const NUMLList &rhs)NUMLList
NMBase::operator=(const NMBase &orig)NMBase
read(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream)NMBase
readAnnotation(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream)NMBaseprivate
readAttributes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLAttributes &attributes)AtomicDescriptionprotectedvirtual
readNotes(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream)NMBaseprivate
readOtherXML(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream)NMBaseprotectedvirtual
remove(unsigned int n)DimensionDescriptionvirtual
remove(const std::string &sid)DimensionDescriptionvirtual
removeTopLevelAnnotationElement(const std::string elementName, const std::string elementURI="")NMBase
replaceTopLevelAnnotationElement(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation)NMBase
replaceTopLevelAnnotationElement(const std::string &annotation)NMBase
setAnnotation(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation)NMBasevirtual
setAnnotation(const std::string &annotation)NMBasevirtual
setId(const std::string &id)AtomicDescriptionvirtual
setMetaId(const std::string &metaid)NMBase
setName(const std::string &name)AtomicDescriptionvirtual
setNamespaces(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces *xmlns)NMBase
setNMBaseFields(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLToken &element)NMBaseprivate
setNotes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *notes)NMBase
setNotes(const std::string &notes, bool addXHTMLMarkup=false)NMBase
setNUMLDocument(NUMLDocument *d)NUMLListvirtual
setNUMLNamespaces(NUMLNamespaces *numlns)NMBase
setOntologyTerm(const std::string &ontologyTerm)AtomicDescription
setParentNUMLObject(NMBase *sb)NUMLListvirtual
setValueType(const std::string &valueType)AtomicDescription
size() constNUMLList
syncAnnotation()NMBase
toNUML()NMBase
unsetAnnotation()NMBase
unsetMetaId()NMBase
unsetNotes()NMBase
write(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) constNMBase
writeAttributes(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) constAtomicDescriptionprotectedvirtual
writeElements(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) constNUMLListvirtual
writeXMLNS(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) constDimensionDescriptionprotectedvirtual
~AtomicDescription()AtomicDescriptionvirtual
~DimensionDescription()DimensionDescriptionvirtual
~NMBase()NMBasevirtual
~NUMLList()NUMLListvirtual