Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c18b' (ED25519) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 4719053 --chroot fedora-rawhide-x86_64 --detached Version: 0.61 PID: 6218 Logging PID: 6219 Task: {'appstream': False, 'background': True, 'build_id': 4719053, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': True, 'fedora_review': False, 'git_hash': 'd0d5f47b16d9a4b4320607230bab1217f2d57783', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/mpb.7/R', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R', 'package_version': '4.2.1-3', 'project_dirname': 'mpb.7', 'project_name': 'mpb.7', 'project_owner': 'thrnciar', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/thrnciar/mpb.7/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'thrnciar/mpb.7--thrnciar', 'source_json': {}, 'source_type': None, 'submitter': 'thrnciar', 'tags': [], 'task_id': '4719053-fedora-rawhide-x86_64', 'timeout': 108000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/thrnciar/mpb.7/R /var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/mpb.7/R', '/var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R'... Running: git checkout d0d5f47b16d9a4b4320607230bab1217f2d57783 cmd: ['git', 'checkout', 'd0d5f47b16d9a4b4320607230bab1217f2d57783'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R rc: 0 stdout: stderr: Note: switching to 'd0d5f47b16d9a4b4320607230bab1217f2d57783'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at d0d5f47 automatic import of R Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading R-4.2.1.tar.gz INFO: Calling: curl -H Pragma: -o R-4.2.1.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/thrnciar/mpb.7/R/R-4.2.1.tar.gz/md5/d363458f20d011c9edf55c8c828af242/R-4.2.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 35.8M 100 35.8M 0 0 22.1M 0 0:00:01 0:00:01 --:--:-- 22.1M INFO: Reading stdout from command: md5sum R-4.2.1.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=108000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R/R.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1660163346.326884 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.1 starting (python version = 3.10.4, NVR = mock-3.1-1.fc35)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R/R.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1660163346.326884/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.1 INFO: Mock Version: 3.1 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 773 kB/s | 5.1 MB 00:06 fedora 4.8 MB/s | 65 MB 00:13 Last metadata expiration check: 0:00:05 ago on Wed Aug 10 20:29:21 2022. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: dnf noarch 4.13.0-3.fc37 fedora 464 k dnf-plugins-core noarch 4.2.1-3.fc37 fedora 34 k Installing dependencies: alternatives x86_64 1.19-3.fc37 fedora 36 k audit-libs x86_64 3.0.8-3.fc37 fedora 116 k basesystem noarch 11-14.fc37 fedora 7.0 k bash x86_64 5.1.16-3.fc37 copr_base 1.7 M bzip2-libs x86_64 1.0.8-12.fc37 fedora 41 k ca-certificates noarch 2022.2.54-5.fc37 fedora 829 k coreutils x86_64 9.1-6.fc37 copr_base 1.1 M coreutils-common x86_64 9.1-6.fc37 copr_base 2.0 M crypto-policies noarch 20220802-1.gita99dfd2.fc37 fedora 86 k curl x86_64 7.84.0-2.fc37 fedora 313 k cyrus-sasl-lib x86_64 2.1.28-7.fc37 copr_base 793 k dbus-libs x86_64 1:1.14.0-3.fc37 fedora 155 k dnf-data noarch 4.13.0-3.fc37 fedora 42 k elfutils-default-yama-scope noarch 0.187-7.fc37 copr_base 17 k elfutils-libelf x86_64 0.187-7.fc37 copr_base 198 k elfutils-libs x86_64 0.187-7.fc37 copr_base 257 k expat x86_64 2.4.8-2.fc37 copr_base 110 k fedora-gpg-keys noarch 37-0.3 fedora 114 k fedora-release noarch 37-0.9 fedora 11 k fedora-release-common noarch 37-0.9 fedora 22 k fedora-release-identity-basic noarch 37-0.9 fedora 12 k fedora-repos noarch 37-0.3 fedora 10 k fedora-repos-rawhide noarch 37-0.3 fedora 9.8 k file-libs x86_64 5.42-4.fc37 copr_base 676 k filesystem x86_64 3.18-1.fc37 fedora 1.1 M findutils x86_64 1:4.9.0-2.fc37 fedora 492 k gawk x86_64 5.1.1-4.fc37 fedora 1.0 M gdbm-libs x86_64 1:1.23-2.fc37 fedora 56 k glib2 x86_64 2.73.2-7.fc37 fedora 2.7 M glibc x86_64 2.36-1.fc37 fedora 2.1 M glibc-common x86_64 2.36-1.fc37 fedora 359 k glibc-minimal-langpack x86_64 2.36-1.fc37 fedora 81 k gmp x86_64 1:6.2.1-3.fc37 copr_base 315 k gnupg2 x86_64 2.3.7-3.fc37 fedora 2.5 M gnutls x86_64 3.7.7-1.fc37 copr_base 1.1 M gpgme x86_64 1.17.0-4.fc37 fedora 210 k grep x86_64 3.7-4.fc37 copr_base 263 k ima-evm-utils x86_64 1.4-6.fc37 fedora 63 k json-c x86_64 0.16-2.fc37 fedora 41 k keyutils-libs x86_64 1.6.1-5.fc37 fedora 31 k krb5-libs x86_64 1.19.2-11.fc37.1 fedora 727 k libacl x86_64 2.3.1-4.fc37 fedora 23 k libarchive x86_64 3.6.1-2.fc37 fedora 397 k libassuan x86_64 2.5.5-5.fc37 fedora 67 k libattr x86_64 2.5.1-5.fc37 fedora 18 k libb2 x86_64 0.98.1-7.fc37 fedora 25 k libblkid x86_64 2.38.1-1.fc37 fedora 107 k libbrotli x86_64 1.0.9-9.fc37 fedora 315 k libcap x86_64 2.48-5.fc37 fedora 67 k libcap-ng x86_64 0.8.3-3.fc37 fedora 33 k libcom_err x86_64 1.46.5-3.fc37 fedora 25 k libcomps x86_64 0.1.18-4.fc37 fedora 76 k libcurl x86_64 7.84.0-2.fc37 fedora 306 k libdnf x86_64 0.67.0-4.fc37 fedora 672 k libevent x86_64 2.1.12-7.fc37 fedora 261 k libffi x86_64 3.4.2-9.fc37 fedora 37 k libfsverity x86_64 1.4-8.fc37 fedora 19 k libgcc x86_64 12.1.1-3.fc37.1 fedora 105 k libgcrypt x86_64 1.10.1-4.fc37 copr_base 512 k libgomp x86_64 12.1.1-3.fc37.1 fedora 292 k libgpg-error x86_64 1.45-2.fc37 copr_base 222 k libidn2 x86_64 2.3.3-2.fc37 fedora 113 k libksba x86_64 1.6.0-4.fc37 fedora 157 k libmodulemd x86_64 2.14.0-4.fc37 fedora 234 k libmount x86_64 2.38.1-1.fc37 fedora 135 k libnghttp2 x86_64 1.48.0-2.fc37 fedora 75 k libnsl2 x86_64 2.0.0-4.fc37 copr_base 31 k libpsl x86_64 0.21.1-6.fc37 fedora 63 k librepo x86_64 1.14.3-3.fc37 fedora 94 k libreport-filesystem noarch 2.17.1-3.fc37 fedora 14 k libselinux x86_64 3.4-5.fc37 fedora 86 k libsemanage x86_64 3.4-5.fc37 fedora 120 k libsepol x86_64 3.4-3.fc37 fedora 322 k libsigsegv x86_64 2.14-3.fc37 fedora 27 k libsmartcols x86_64 2.38.1-1.fc37 fedora 64 k libsolv x86_64 0.7.22-3.fc37 fedora 405 k libssh x86_64 0.9.6-5.fc37 fedora 203 k libssh-config noarch 0.9.6-5.fc37 fedora 7.8 k libstdc++ x86_64 12.1.1-3.fc37.1 fedora 797 k libtasn1 x86_64 4.18.0-3.fc37 copr_base 75 k libtirpc x86_64 1.3.3-0.fc37 copr_base 94 k libunistring x86_64 1.0-2.fc37 fedora 549 k libuuid x86_64 2.38.1-1.fc37 fedora 28 k libverto x86_64 0.3.2-4.fc37 copr_base 21 k libxcrypt x86_64 4.4.28-2.fc37 fedora 118 k libxml2 x86_64 2.9.14-3.fc37 fedora 752 k libyaml x86_64 0.2.5-8.fc37 copr_base 60 k libzstd x86_64 1.5.2-3.fc37 fedora 294 k lua-libs x86_64 5.4.4-4.fc37 copr_base 217 k lz4-libs x86_64 1.9.3-5.fc37 fedora 70 k mpdecimal x86_64 2.5.1-4.fc37 fedora 102 k mpfr x86_64 4.1.0-10.fc37 fedora 331 k ncurses-base noarch 6.3-3.20220501.fc37 fedora 86 k ncurses-libs x86_64 6.3-3.20220501.fc37 fedora 329 k nettle x86_64 3.8-2.fc37 copr_base 414 k npth x86_64 1.6-9.fc37 fedora 24 k openldap x86_64 2.6.2-4.fc37 fedora 254 k openssl-libs x86_64 1:3.0.5-2.fc37 fedora 2.1 M p11-kit x86_64 0.24.1-3.fc37 fedora 376 k p11-kit-trust x86_64 0.24.1-3.fc37 fedora 138 k pcre x86_64 8.45-1.fc37.2 copr_base 202 k pcre2 x86_64 10.40-1.fc37.1 copr_base 236 k pcre2-syntax noarch 10.40-1.fc37.1 copr_base 143 k popt x86_64 1.19~rc1-3.fc37 fedora 65 k publicsuffix-list-dafsa noarch 20210518-5.fc37 fedora 58 k python-pip-wheel noarch 22.2-1.fc37 fedora 1.4 M python-setuptools-wheel noarch 62.6.0-2.fc37 fedora 712 k python3 x86_64 3.11.0~rc1-1.fc37 copr_base 27 k python3-dateutil noarch 1:2.8.2-4.fc37 fedora 361 k python3-dbus x86_64 1.2.18-5.fc37 fedora 156 k python3-distro noarch 1.7.0-3.fc37 fedora 48 k python3-dnf noarch 4.13.0-3.fc37 fedora 605 k python3-dnf-plugins-core noarch 4.2.1-3.fc37 fedora 268 k python3-gpg x86_64 1.17.0-4.fc37 fedora 298 k python3-hawkey x86_64 0.67.0-4.fc37 fedora 108 k python3-libcomps x86_64 0.1.18-4.fc37 fedora 48 k python3-libdnf x86_64 0.67.0-4.fc37 fedora 818 k python3-libs x86_64 3.11.0~rc1-1.fc37 copr_base 9.3 M python3-rpm x86_64 4.18.0-0.beta1.4.fc37 fedora 93 k python3-six noarch 1.16.0-8.fc37 fedora 42 k readline x86_64 8.1-7.fc37 fedora 211 k rpm x86_64 4.18.0-0.beta1.4.fc37 fedora 570 k rpm-build-libs x86_64 4.18.0-0.beta1.4.fc37 fedora 93 k rpm-libs x86_64 4.18.0-0.beta1.4.fc37 fedora 319 k rpm-sign-libs x86_64 4.18.0-0.beta1.4.fc37 fedora 26 k sed x86_64 4.8-11.fc37 copr_base 297 k setup noarch 2.14.1-2.fc37 fedora 149 k shadow-utils x86_64 2:4.11.1-4.fc37 fedora 1.1 M sqlite-libs x86_64 3.39.2-2.fc37 copr_base 657 k systemd-libs x86_64 251.3-2.fc37 fedora 620 k tpm2-tss x86_64 3.2.0-3.fc37 fedora 600 k tzdata noarch 2022a-4.fc37 fedora 719 k xz-libs x86_64 5.2.5-10.fc37 fedora 92 k zchunk-libs x86_64 1.2.2-2.fc37 fedora 51 k zlib x86_64 1.2.12-4.fc37 copr_base 94 k Transaction Summary ================================================================================ Install 137 Packages Total download size: 55 M Installed size: 195 M Downloading Packages: (1/137): coreutils-9.1-6.fc37.x86_64.rpm 11 MB/s | 1.1 MB 00:00 (2/137): bash-5.1.16-3.fc37.x86_64.rpm 14 MB/s | 1.7 MB 00:00 (3/137): coreutils-common-9.1-6.fc37.x86_64.rpm 17 MB/s | 2.0 MB 00:00 (4/137): cyrus-sasl-lib-2.1.28-7.fc37.x86_64.rp 26 MB/s | 793 kB 00:00 (5/137): elfutils-default-yama-scope-0.187-7.fc 1.6 MB/s | 17 kB 00:00 (6/137): elfutils-libelf-0.187-7.fc37.x86_64.rp 13 MB/s | 198 kB 00:00 (7/137): expat-2.4.8-2.fc37.x86_64.rpm 8.4 MB/s | 110 kB 00:00 (8/137): elfutils-libs-0.187-7.fc37.x86_64.rpm 14 MB/s | 257 kB 00:00 (9/137): file-libs-5.42-4.fc37.x86_64.rpm 21 MB/s | 676 kB 00:00 (10/137): gmp-6.2.1-3.fc37.x86_64.rpm 8.7 MB/s | 315 kB 00:00 (11/137): grep-3.7-4.fc37.x86_64.rpm 6.6 MB/s | 263 kB 00:00 (12/137): libgcrypt-1.10.1-4.fc37.x86_64.rpm 15 MB/s | 512 kB 00:00 (13/137): gnutls-3.7.7-1.fc37.x86_64.rpm 16 MB/s | 1.1 MB 00:00 (14/137): libnsl2-2.0.0-4.fc37.x86_64.rpm 2.1 MB/s | 31 kB 00:00 (15/137): libgpg-error-1.45-2.fc37.x86_64.rpm 8.6 MB/s | 222 kB 00:00 (16/137): libtasn1-4.18.0-3.fc37.x86_64.rpm 4.0 MB/s | 75 kB 00:00 (17/137): libtirpc-1.3.3-0.fc37.x86_64.rpm 4.1 MB/s | 94 kB 00:00 (18/137): libverto-0.3.2-4.fc37.x86_64.rpm 1.3 MB/s | 21 kB 00:00 (19/137): libyaml-0.2.5-8.fc37.x86_64.rpm 2.2 MB/s | 60 kB 00:00 (20/137): lua-libs-5.4.4-4.fc37.x86_64.rpm 12 MB/s | 217 kB 00:00 (21/137): nettle-3.8-2.fc37.x86_64.rpm 16 MB/s | 414 kB 00:00 (22/137): pcre-8.45-1.fc37.2.x86_64.rpm 8.1 MB/s | 202 kB 00:00 (23/137): pcre2-10.40-1.fc37.1.x86_64.rpm 4.1 MB/s | 236 kB 00:00 (24/137): pcre2-syntax-10.40-1.fc37.1.noarch.rp 2.6 MB/s | 143 kB 00:00 (25/137): python3-3.11.0~rc1-1.fc37.x86_64.rpm 609 kB/s | 27 kB 00:00 (26/137): sed-4.8-11.fc37.x86_64.rpm 5.5 MB/s | 297 kB 00:00 (27/137): sqlite-libs-3.39.2-2.fc37.x86_64.rpm 8.3 MB/s | 657 kB 00:00 (28/137): zlib-1.2.12-4.fc37.x86_64.rpm 1.0 MB/s | 94 kB 00:00 (29/137): python3-libs-3.11.0~rc1-1.fc37.x86_64 50 MB/s | 9.3 MB 00:00 (30/137): alternatives-1.19-3.fc37.x86_64.rpm 209 kB/s | 36 kB 00:00 (31/137): basesystem-11-14.fc37.noarch.rpm 80 kB/s | 7.0 kB 00:00 (32/137): bzip2-libs-1.0.8-12.fc37.x86_64.rpm 403 kB/s | 41 kB 00:00 (33/137): audit-libs-3.0.8-3.fc37.x86_64.rpm 402 kB/s | 116 kB 00:00 (34/137): crypto-policies-20220802-1.gita99dfd2 662 kB/s | 86 kB 00:00 (35/137): dbus-libs-1.14.0-3.fc37.x86_64.rpm 1.2 MB/s | 155 kB 00:00 (36/137): curl-7.84.0-2.fc37.x86_64.rpm 1.1 MB/s | 313 kB 00:00 (37/137): ca-certificates-2022.2.54-5.fc37.noar 1.8 MB/s | 829 kB 00:00 (38/137): dnf-data-4.13.0-3.fc37.noarch.rpm 875 kB/s | 42 kB 00:00 (39/137): dnf-plugins-core-4.2.1-3.fc37.noarch. 680 kB/s | 34 kB 00:00 (40/137): fedora-gpg-keys-37-0.3.noarch.rpm 2.0 MB/s | 114 kB 00:00 (41/137): fedora-release-37-0.9.noarch.rpm 260 kB/s | 11 kB 00:00 (42/137): fedora-release-common-37-0.9.noarch.r 513 kB/s | 22 kB 00:00 (43/137): fedora-release-identity-basic-37-0.9. 292 kB/s | 12 kB 00:00 (44/137): dnf-4.13.0-3.fc37.noarch.rpm 1.9 MB/s | 464 kB 00:00 (45/137): fedora-repos-37-0.3.noarch.rpm 243 kB/s | 10 kB 00:00 (46/137): fedora-repos-rawhide-37-0.3.noarch.rp 235 kB/s | 9.8 kB 00:00 (47/137): findutils-4.9.0-2.fc37.x86_64.rpm 3.7 MB/s | 492 kB 00:00 (48/137): gawk-5.1.1-4.fc37.x86_64.rpm 5.5 MB/s | 1.0 MB 00:00 (49/137): filesystem-3.18-1.fc37.x86_64.rpm 4.8 MB/s | 1.1 MB 00:00 (50/137): gdbm-libs-1.23-2.fc37.x86_64.rpm 703 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tzdata-2022a-4.fc37.noarch.rpm 2.5 MB/s | 719 kB 00:00 -------------------------------------------------------------------------------- Total 9.3 MB/s | 55 MB 00:05 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x5323552A: Userid : "Fedora (37) " Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary (0x5323552A) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x38AB71F4: Userid : "Fedora (36) " Fingerprint: 53DE D2CB 922D 8B8D 9E63 FD18 999F 7CBF 38AB 71F4 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-36-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-1.fc37.x86_64 1/1 Preparing : 1/1 Installing : libgcc-12.1.1-3.fc37.1.x86_64 1/137 Running scriptlet: libgcc-12.1.1-3.fc37.1.x86_64 1/137 Installing : crypto-policies-20220802-1.gita99dfd2.fc37.noarc 2/137 Running scriptlet: crypto-policies-20220802-1.gita99dfd2.fc37.noarc 2/137 Installing : tzdata-2022a-4.fc37.noarch 3/137 Installing : fedora-release-identity-basic-37-0.9.noarch 4/137 Installing : python-setuptools-wheel-62.6.0-2.fc37.noarch 5/137 Installing : publicsuffix-list-dafsa-20210518-5.fc37.noarch 6/137 Installing : ncurses-base-6.3-3.20220501.fc37.noarch 7/137 Installing : libssh-config-0.9.6-5.fc37.noarch 8/137 Installing : libreport-filesystem-2.17.1-3.fc37.noarch 9/137 Installing : dnf-data-4.13.0-3.fc37.noarch 10/137 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : fedora-gpg-keys-37-0.3.noarch 11/137 Installing : fedora-release-37-0.9.noarch 12/137 Installing : 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libgcrypt-1.10.1-4.fc37.x86_64 13/137 Verifying : libgpg-error-1.45-2.fc37.x86_64 14/137 Verifying : libnsl2-2.0.0-4.fc37.x86_64 15/137 Verifying : libtasn1-4.18.0-3.fc37.x86_64 16/137 Verifying : libtirpc-1.3.3-0.fc37.x86_64 17/137 Verifying : libverto-0.3.2-4.fc37.x86_64 18/137 Verifying : libyaml-0.2.5-8.fc37.x86_64 19/137 Verifying : lua-libs-5.4.4-4.fc37.x86_64 20/137 Verifying : nettle-3.8-2.fc37.x86_64 21/137 Verifying : pcre-8.45-1.fc37.2.x86_64 22/137 Verifying : pcre2-10.40-1.fc37.1.x86_64 23/137 Verifying : pcre2-syntax-10.40-1.fc37.1.noarch 24/137 Verifying : python3-3.11.0~rc1-1.fc37.x86_64 25/137 Verifying : python3-libs-3.11.0~rc1-1.fc37.x86_64 26/137 Verifying : sed-4.8-11.fc37.x86_64 27/137 Verifying : sqlite-libs-3.39.2-2.fc37.x86_64 28/137 Verifying : zlib-1.2.12-4.fc37.x86_64 29/137 Verifying : alternatives-1.19-3.fc37.x86_64 30/137 Verifying : audit-libs-3.0.8-3.fc37.x86_64 31/137 Verifying : basesystem-11-14.fc37.noarch 32/137 Verifying : bzip2-libs-1.0.8-12.fc37.x86_64 33/137 Verifying : ca-certificates-2022.2.54-5.fc37.noarch 34/137 Verifying : crypto-policies-20220802-1.gita99dfd2.fc37.noarc 35/137 Verifying : curl-7.84.0-2.fc37.x86_64 36/137 Verifying : dbus-libs-1:1.14.0-3.fc37.x86_64 37/137 Verifying : dnf-4.13.0-3.fc37.noarch 38/137 Verifying : dnf-data-4.13.0-3.fc37.noarch 39/137 Verifying : dnf-plugins-core-4.2.1-3.fc37.noarch 40/137 Verifying : fedora-gpg-keys-37-0.3.noarch 41/137 Verifying : fedora-release-37-0.9.noarch 42/137 Verifying : fedora-release-common-37-0.9.noarch 43/137 Verifying : fedora-release-identity-basic-37-0.9.noarch 44/137 Verifying : fedora-repos-37-0.3.noarch 45/137 Verifying : fedora-repos-rawhide-37-0.3.noarch 46/137 Verifying : filesystem-3.18-1.fc37.x86_64 47/137 Verifying : findutils-1:4.9.0-2.fc37.x86_64 48/137 Verifying : gawk-5.1.1-4.fc37.x86_64 49/137 Verifying : gdbm-libs-1:1.23-2.fc37.x86_64 50/137 Verifying : glib2-2.73.2-7.fc37.x86_64 51/137 Verifying : glibc-2.36-1.fc37.x86_64 52/137 Verifying : glibc-common-2.36-1.fc37.x86_64 53/137 Verifying : glibc-minimal-langpack-2.36-1.fc37.x86_64 54/137 Verifying : gnupg2-2.3.7-3.fc37.x86_64 55/137 Verifying : gpgme-1.17.0-4.fc37.x86_64 56/137 Verifying : ima-evm-utils-1.4-6.fc37.x86_64 57/137 Verifying : json-c-0.16-2.fc37.x86_64 58/137 Verifying : keyutils-libs-1.6.1-5.fc37.x86_64 59/137 Verifying : krb5-libs-1.19.2-11.fc37.1.x86_64 60/137 Verifying : libacl-2.3.1-4.fc37.x86_64 61/137 Verifying : libarchive-3.6.1-2.fc37.x86_64 62/137 Verifying : libassuan-2.5.5-5.fc37.x86_64 63/137 Verifying : libattr-2.5.1-5.fc37.x86_64 64/137 Verifying : libb2-0.98.1-7.fc37.x86_64 65/137 Verifying : libblkid-2.38.1-1.fc37.x86_64 66/137 Verifying : libbrotli-1.0.9-9.fc37.x86_64 67/137 Verifying : libcap-2.48-5.fc37.x86_64 68/137 Verifying : libcap-ng-0.8.3-3.fc37.x86_64 69/137 Verifying : libcom_err-1.46.5-3.fc37.x86_64 70/137 Verifying : libcomps-0.1.18-4.fc37.x86_64 71/137 Verifying : libcurl-7.84.0-2.fc37.x86_64 72/137 Verifying : libdnf-0.67.0-4.fc37.x86_64 73/137 Verifying : libevent-2.1.12-7.fc37.x86_64 74/137 Verifying : libffi-3.4.2-9.fc37.x86_64 75/137 Verifying : libfsverity-1.4-8.fc37.x86_64 76/137 Verifying : libgcc-12.1.1-3.fc37.1.x86_64 77/137 Verifying : libgomp-12.1.1-3.fc37.1.x86_64 78/137 Verifying : libidn2-2.3.3-2.fc37.x86_64 79/137 Verifying : libksba-1.6.0-4.fc37.x86_64 80/137 Verifying : libmodulemd-2.14.0-4.fc37.x86_64 81/137 Verifying : libmount-2.38.1-1.fc37.x86_64 82/137 Verifying : libnghttp2-1.48.0-2.fc37.x86_64 83/137 Verifying : libpsl-0.21.1-6.fc37.x86_64 84/137 Verifying : librepo-1.14.3-3.fc37.x86_64 85/137 Verifying : libreport-filesystem-2.17.1-3.fc37.noarch 86/137 Verifying : libselinux-3.4-5.fc37.x86_64 87/137 Verifying : libsemanage-3.4-5.fc37.x86_64 88/137 Verifying : libsepol-3.4-3.fc37.x86_64 89/137 Verifying : libsigsegv-2.14-3.fc37.x86_64 90/137 Verifying : libsmartcols-2.38.1-1.fc37.x86_64 91/137 Verifying : libsolv-0.7.22-3.fc37.x86_64 92/137 Verifying : libssh-0.9.6-5.fc37.x86_64 93/137 Verifying : libssh-config-0.9.6-5.fc37.noarch 94/137 Verifying : libstdc++-12.1.1-3.fc37.1.x86_64 95/137 Verifying : libunistring-1.0-2.fc37.x86_64 96/137 Verifying : libuuid-2.38.1-1.fc37.x86_64 97/137 Verifying : libxcrypt-4.4.28-2.fc37.x86_64 98/137 Verifying : libxml2-2.9.14-3.fc37.x86_64 99/137 Verifying : libzstd-1.5.2-3.fc37.x86_64 100/137 Verifying : lz4-libs-1.9.3-5.fc37.x86_64 101/137 Verifying : mpdecimal-2.5.1-4.fc37.x86_64 102/137 Verifying : mpfr-4.1.0-10.fc37.x86_64 103/137 Verifying : ncurses-base-6.3-3.20220501.fc37.noarch 104/137 Verifying : ncurses-libs-6.3-3.20220501.fc37.x86_64 105/137 Verifying : npth-1.6-9.fc37.x86_64 106/137 Verifying : openldap-2.6.2-4.fc37.x86_64 107/137 Verifying : openssl-libs-1:3.0.5-2.fc37.x86_64 108/137 Verifying : p11-kit-0.24.1-3.fc37.x86_64 109/137 Verifying : p11-kit-trust-0.24.1-3.fc37.x86_64 110/137 Verifying : popt-1.19~rc1-3.fc37.x86_64 111/137 Verifying : publicsuffix-list-dafsa-20210518-5.fc37.noarch 112/137 Verifying : python-pip-wheel-22.2-1.fc37.noarch 113/137 Verifying : python-setuptools-wheel-62.6.0-2.fc37.noarch 114/137 Verifying : python3-dateutil-1:2.8.2-4.fc37.noarch 115/137 Verifying : python3-dbus-1.2.18-5.fc37.x86_64 116/137 Verifying : python3-distro-1.7.0-3.fc37.noarch 117/137 Verifying : python3-dnf-4.13.0-3.fc37.noarch 118/137 Verifying : python3-dnf-plugins-core-4.2.1-3.fc37.noarch 119/137 Verifying : python3-gpg-1.17.0-4.fc37.x86_64 120/137 Verifying : python3-hawkey-0.67.0-4.fc37.x86_64 121/137 Verifying : python3-libcomps-0.1.18-4.fc37.x86_64 122/137 Verifying : python3-libdnf-0.67.0-4.fc37.x86_64 123/137 Verifying : python3-rpm-4.18.0-0.beta1.4.fc37.x86_64 124/137 Verifying : python3-six-1.16.0-8.fc37.noarch 125/137 Verifying : readline-8.1-7.fc37.x86_64 126/137 Verifying : rpm-4.18.0-0.beta1.4.fc37.x86_64 127/137 Verifying : rpm-build-libs-4.18.0-0.beta1.4.fc37.x86_64 128/137 Verifying : rpm-libs-4.18.0-0.beta1.4.fc37.x86_64 129/137 Verifying : rpm-sign-libs-4.18.0-0.beta1.4.fc37.x86_64 130/137 Verifying : setup-2.14.1-2.fc37.noarch 131/137 Verifying : shadow-utils-2:4.11.1-4.fc37.x86_64 132/137 Verifying : systemd-libs-251.3-2.fc37.x86_64 133/137 Verifying : tpm2-tss-3.2.0-3.fc37.x86_64 134/137 Verifying : tzdata-2022a-4.fc37.noarch 135/137 Verifying : xz-libs-5.2.5-10.fc37.x86_64 136/137 Verifying : zchunk-libs-1.2.2-2.fc37.x86_64 137/137 Installed products updated. Installed: alternatives-1.19-3.fc37.x86_64 audit-libs-3.0.8-3.fc37.x86_64 basesystem-11-14.fc37.noarch bash-5.1.16-3.fc37.x86_64 bzip2-libs-1.0.8-12.fc37.x86_64 ca-certificates-2022.2.54-5.fc37.noarch coreutils-9.1-6.fc37.x86_64 coreutils-common-9.1-6.fc37.x86_64 crypto-policies-20220802-1.gita99dfd2.fc37.noarch curl-7.84.0-2.fc37.x86_64 cyrus-sasl-lib-2.1.28-7.fc37.x86_64 dbus-libs-1:1.14.0-3.fc37.x86_64 dnf-4.13.0-3.fc37.noarch dnf-data-4.13.0-3.fc37.noarch dnf-plugins-core-4.2.1-3.fc37.noarch elfutils-default-yama-scope-0.187-7.fc37.noarch elfutils-libelf-0.187-7.fc37.x86_64 elfutils-libs-0.187-7.fc37.x86_64 expat-2.4.8-2.fc37.x86_64 fedora-gpg-keys-37-0.3.noarch fedora-release-37-0.9.noarch fedora-release-common-37-0.9.noarch fedora-release-identity-basic-37-0.9.noarch fedora-repos-37-0.3.noarch fedora-repos-rawhide-37-0.3.noarch file-libs-5.42-4.fc37.x86_64 filesystem-3.18-1.fc37.x86_64 findutils-1:4.9.0-2.fc37.x86_64 gawk-5.1.1-4.fc37.x86_64 gdbm-libs-1:1.23-2.fc37.x86_64 glib2-2.73.2-7.fc37.x86_64 glibc-2.36-1.fc37.x86_64 glibc-common-2.36-1.fc37.x86_64 glibc-minimal-langpack-2.36-1.fc37.x86_64 gmp-1:6.2.1-3.fc37.x86_64 gnupg2-2.3.7-3.fc37.x86_64 gnutls-3.7.7-1.fc37.x86_64 gpgme-1.17.0-4.fc37.x86_64 grep-3.7-4.fc37.x86_64 ima-evm-utils-1.4-6.fc37.x86_64 json-c-0.16-2.fc37.x86_64 keyutils-libs-1.6.1-5.fc37.x86_64 krb5-libs-1.19.2-11.fc37.1.x86_64 libacl-2.3.1-4.fc37.x86_64 libarchive-3.6.1-2.fc37.x86_64 libassuan-2.5.5-5.fc37.x86_64 libattr-2.5.1-5.fc37.x86_64 libb2-0.98.1-7.fc37.x86_64 libblkid-2.38.1-1.fc37.x86_64 libbrotli-1.0.9-9.fc37.x86_64 libcap-2.48-5.fc37.x86_64 libcap-ng-0.8.3-3.fc37.x86_64 libcom_err-1.46.5-3.fc37.x86_64 libcomps-0.1.18-4.fc37.x86_64 libcurl-7.84.0-2.fc37.x86_64 libdnf-0.67.0-4.fc37.x86_64 libevent-2.1.12-7.fc37.x86_64 libffi-3.4.2-9.fc37.x86_64 libfsverity-1.4-8.fc37.x86_64 libgcc-12.1.1-3.fc37.1.x86_64 libgcrypt-1.10.1-4.fc37.x86_64 libgomp-12.1.1-3.fc37.1.x86_64 libgpg-error-1.45-2.fc37.x86_64 libidn2-2.3.3-2.fc37.x86_64 libksba-1.6.0-4.fc37.x86_64 libmodulemd-2.14.0-4.fc37.x86_64 libmount-2.38.1-1.fc37.x86_64 libnghttp2-1.48.0-2.fc37.x86_64 libnsl2-2.0.0-4.fc37.x86_64 libpsl-0.21.1-6.fc37.x86_64 librepo-1.14.3-3.fc37.x86_64 libreport-filesystem-2.17.1-3.fc37.noarch libselinux-3.4-5.fc37.x86_64 libsemanage-3.4-5.fc37.x86_64 libsepol-3.4-3.fc37.x86_64 libsigsegv-2.14-3.fc37.x86_64 libsmartcols-2.38.1-1.fc37.x86_64 libsolv-0.7.22-3.fc37.x86_64 libssh-0.9.6-5.fc37.x86_64 libssh-config-0.9.6-5.fc37.noarch libstdc++-12.1.1-3.fc37.1.x86_64 libtasn1-4.18.0-3.fc37.x86_64 libtirpc-1.3.3-0.fc37.x86_64 libunistring-1.0-2.fc37.x86_64 libuuid-2.38.1-1.fc37.x86_64 libverto-0.3.2-4.fc37.x86_64 libxcrypt-4.4.28-2.fc37.x86_64 libxml2-2.9.14-3.fc37.x86_64 libyaml-0.2.5-8.fc37.x86_64 libzstd-1.5.2-3.fc37.x86_64 lua-libs-5.4.4-4.fc37.x86_64 lz4-libs-1.9.3-5.fc37.x86_64 mpdecimal-2.5.1-4.fc37.x86_64 mpfr-4.1.0-10.fc37.x86_64 ncurses-base-6.3-3.20220501.fc37.noarch ncurses-libs-6.3-3.20220501.fc37.x86_64 nettle-3.8-2.fc37.x86_64 npth-1.6-9.fc37.x86_64 openldap-2.6.2-4.fc37.x86_64 openssl-libs-1:3.0.5-2.fc37.x86_64 p11-kit-0.24.1-3.fc37.x86_64 p11-kit-trust-0.24.1-3.fc37.x86_64 pcre-8.45-1.fc37.2.x86_64 pcre2-10.40-1.fc37.1.x86_64 pcre2-syntax-10.40-1.fc37.1.noarch popt-1.19~rc1-3.fc37.x86_64 publicsuffix-list-dafsa-20210518-5.fc37.noarch python-pip-wheel-22.2-1.fc37.noarch python-setuptools-wheel-62.6.0-2.fc37.noarch python3-3.11.0~rc1-1.fc37.x86_64 python3-dateutil-1:2.8.2-4.fc37.noarch python3-dbus-1.2.18-5.fc37.x86_64 python3-distro-1.7.0-3.fc37.noarch python3-dnf-4.13.0-3.fc37.noarch python3-dnf-plugins-core-4.2.1-3.fc37.noarch python3-gpg-1.17.0-4.fc37.x86_64 python3-hawkey-0.67.0-4.fc37.x86_64 python3-libcomps-0.1.18-4.fc37.x86_64 python3-libdnf-0.67.0-4.fc37.x86_64 python3-libs-3.11.0~rc1-1.fc37.x86_64 python3-rpm-4.18.0-0.beta1.4.fc37.x86_64 python3-six-1.16.0-8.fc37.noarch readline-8.1-7.fc37.x86_64 rpm-4.18.0-0.beta1.4.fc37.x86_64 rpm-build-libs-4.18.0-0.beta1.4.fc37.x86_64 rpm-libs-4.18.0-0.beta1.4.fc37.x86_64 rpm-sign-libs-4.18.0-0.beta1.4.fc37.x86_64 sed-4.8-11.fc37.x86_64 setup-2.14.1-2.fc37.noarch shadow-utils-2:4.11.1-4.fc37.x86_64 sqlite-libs-3.39.2-2.fc37.x86_64 systemd-libs-251.3-2.fc37.x86_64 tpm2-tss-3.2.0-3.fc37.x86_64 tzdata-2022a-4.fc37.noarch xz-libs-5.2.5-10.fc37.x86_64 zchunk-libs-1.2.2-2.fc37.x86_64 zlib-1.2.12-4.fc37.x86_64 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1660163346.326884/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.1 INFO: Mock Version: 3.1 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 13 MB/s | 5.1 MB 00:00 fedora 15 MB/s | 65 MB 00:04 Last metadata expiration check: 0:00:01 ago on Wed Aug 10 20:30:10 2022. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.1.16-3.fc37 copr_base 1.7 M bzip2 x86_64 1.0.8-12.fc37 fedora 52 k coreutils x86_64 9.1-6.fc37 copr_base 1.1 M cpio x86_64 2.13-13.fc37 copr_base 270 k diffutils x86_64 3.8-3.fc37 copr_base 370 k fedora-release-common noarch 37-0.9 fedora 22 k findutils x86_64 1:4.9.0-2.fc37 fedora 492 k gawk x86_64 5.1.1-4.fc37 fedora 1.0 M glibc-minimal-langpack x86_64 2.36-1.fc37 fedora 81 k grep x86_64 3.7-4.fc37 copr_base 263 k gzip x86_64 1.12-2.fc37 copr_base 159 k info x86_64 6.8-4.fc37 fedora 225 k patch x86_64 2.7.6-17.fc37 copr_base 124 k redhat-rpm-config noarch 226-1.fc37 fedora 74 k rpm-build x86_64 4.18.0-0.beta1.4.fc37 fedora 76 k sed x86_64 4.8-11.fc37 copr_base 297 k shadow-utils x86_64 2:4.11.1-4.fc37 fedora 1.1 M tar x86_64 2:1.34-4.fc37 copr_base 877 k unzip x86_64 6.0-58.fc37 fedora 182 k util-linux x86_64 2.38.1-1.fc37 fedora 2.3 M which x86_64 2.21-35.fc37 fedora 41 k xz x86_64 5.2.5-10.fc37 fedora 223 k Installing dependencies: alternatives x86_64 1.19-3.fc37 fedora 36 k ansible-srpm-macros noarch 1-6.fc37 fedora 7.5 k audit-libs x86_64 3.0.8-3.fc37 fedora 116 k authselect x86_64 1.4.0-3.fc37 copr_base 140 k authselect-libs x86_64 1.4.0-3.fc37 copr_base 235 k basesystem noarch 11-14.fc37 fedora 7.0 k binutils x86_64 2.38-24.fc37 copr_base 5.4 M binutils-gold x86_64 2.38-24.fc37 copr_base 779 k bzip2-libs x86_64 1.0.8-12.fc37 fedora 41 k ca-certificates noarch 2022.2.54-5.fc37 fedora 829 k coreutils-common x86_64 9.1-6.fc37 copr_base 2.0 M cracklib x86_64 2.9.6-28.fc36 fedora 81 k crypto-policies noarch 20220802-1.gita99dfd2.fc37 fedora 86 k curl x86_64 7.84.0-2.fc37 fedora 313 k cyrus-sasl-lib x86_64 2.1.28-7.fc37 copr_base 793 k debugedit x86_64 5.0-5.fc37 copr_base 77 k dwz x86_64 0.14-7.fc37 fedora 129 k ed x86_64 1.18-2.fc37 fedora 78 k efi-srpm-macros noarch 5-6.fc37 fedora 22 k elfutils x86_64 0.187-7.fc37 copr_base 523 k elfutils-debuginfod-client x86_64 0.187-7.fc37 copr_base 39 k elfutils-default-yama-scope noarch 0.187-7.fc37 copr_base 17 k elfutils-libelf x86_64 0.187-7.fc37 copr_base 198 k elfutils-libs x86_64 0.187-7.fc37 copr_base 257 k fedora-gpg-keys noarch 37-0.3 fedora 114 k fedora-release noarch 37-0.9 fedora 11 k fedora-release-identity-basic noarch 37-0.9 fedora 12 k fedora-repos noarch 37-0.3 fedora 10 k fedora-repos-rawhide noarch 37-0.3 fedora 9.8 k file x86_64 5.42-4.fc37 copr_base 49 k file-libs x86_64 5.42-4.fc37 copr_base 676 k filesystem x86_64 3.18-1.fc37 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-8.fc37 fedora 26 k fpc-srpm-macros noarch 1.3-6.fc37 fedora 7.7 k gdb-minimal x86_64 12.1-4.fc37 fedora 3.9 M gdbm-libs x86_64 1:1.23-2.fc37 fedora 56 k ghc-srpm-macros noarch 1.5.0-7.fc37 fedora 7.8 k glibc x86_64 2.36-1.fc37 fedora 2.1 M glibc-common x86_64 2.36-1.fc37 fedora 359 k glibc-gconv-extra x86_64 2.36-1.fc37 fedora 1.6 M gmp x86_64 1:6.2.1-3.fc37 copr_base 315 k gnat-srpm-macros noarch 4-16.fc37 fedora 8.3 k go-srpm-macros noarch 3.0.15-3.fc37 fedora 26 k jansson x86_64 2.13.1-5.fc37 fedora 44 k kernel-srpm-macros noarch 1.0-15.fc37 fedora 9.4 k keyutils-libs x86_64 1.6.1-5.fc37 fedora 31 k krb5-libs x86_64 1.19.2-11.fc37.1 fedora 727 k libacl x86_64 2.3.1-4.fc37 fedora 23 k libarchive x86_64 3.6.1-2.fc37 fedora 397 k libattr x86_64 2.5.1-5.fc37 fedora 18 k libblkid x86_64 2.38.1-1.fc37 fedora 107 k libbrotli x86_64 1.0.9-9.fc37 fedora 315 k libcap x86_64 2.48-5.fc37 fedora 67 k libcap-ng x86_64 0.8.3-3.fc37 fedora 33 k libcom_err x86_64 1.46.5-3.fc37 fedora 25 k libcurl x86_64 7.84.0-2.fc37 fedora 306 k libdb x86_64 5.3.28-53.fc37 fedora 760 k libeconf x86_64 0.4.0-4.fc37 fedora 27 k libevent x86_64 2.1.12-7.fc37 fedora 261 k libfdisk x86_64 2.38.1-1.fc37 fedora 160 k libffi x86_64 3.4.2-9.fc37 fedora 37 k libgcc x86_64 12.1.1-3.fc37.1 fedora 105 k libgomp x86_64 12.1.1-3.fc37.1 fedora 292 k libidn2 x86_64 2.3.3-2.fc37 fedora 113 k libmount x86_64 2.38.1-1.fc37 fedora 135 k libnghttp2 x86_64 1.48.0-2.fc37 fedora 75 k libnsl2 x86_64 2.0.0-4.fc37 copr_base 31 k libpkgconf x86_64 1.8.0-3.fc37 copr_base 36 k libpsl x86_64 0.21.1-6.fc37 fedora 63 k libpwquality x86_64 1.4.4-11.fc37 fedora 116 k libselinux x86_64 3.4-5.fc37 fedora 86 k libsemanage x86_64 3.4-5.fc37 fedora 120 k libsepol x86_64 3.4-3.fc37 fedora 322 k libsigsegv x86_64 2.14-3.fc37 fedora 27 k libsmartcols x86_64 2.38.1-1.fc37 fedora 64 k libssh x86_64 0.9.6-5.fc37 fedora 203 k libssh-config noarch 0.9.6-5.fc37 fedora 7.8 k libstdc++ x86_64 12.1.1-3.fc37.1 fedora 797 k libtasn1 x86_64 4.18.0-3.fc37 copr_base 75 k libtirpc x86_64 1.3.3-0.fc37 copr_base 94 k libunistring x86_64 1.0-2.fc37 fedora 549 k libutempter x86_64 1.2.1-7.fc37 fedora 26 k libuuid x86_64 2.38.1-1.fc37 fedora 28 k libverto x86_64 0.3.2-4.fc37 copr_base 21 k libxcrypt x86_64 4.4.28-2.fc37 fedora 118 k libxml2 x86_64 2.9.14-3.fc37 fedora 752 k libzstd x86_64 1.5.2-3.fc37 fedora 294 k lua-libs x86_64 5.4.4-4.fc37 copr_base 217 k lua-srpm-macros noarch 1-7.fc37 fedora 8.8 k lz4-libs x86_64 1.9.3-5.fc37 fedora 70 k mpfr x86_64 4.1.0-10.fc37 fedora 331 k ncurses-base noarch 6.3-3.20220501.fc37 fedora 86 k ncurses-libs x86_64 6.3-3.20220501.fc37 fedora 329 k nim-srpm-macros noarch 3-7.fc37 fedora 8.4 k ocaml-srpm-macros noarch 7-2.fc37 fedora 13 k openblas-srpm-macros noarch 2-12.fc37 fedora 7.5 k openldap x86_64 2.6.2-4.fc37 fedora 254 k openssl-libs x86_64 1:3.0.5-2.fc37 fedora 2.1 M p11-kit x86_64 0.24.1-3.fc37 fedora 376 k p11-kit-trust x86_64 0.24.1-3.fc37 fedora 138 k package-notes-srpm-macros noarch 0.4-16.fc37 fedora 11 k pam x86_64 1.5.2-14.fc37 fedora 560 k pam-libs x86_64 1.5.2-14.fc37 fedora 58 k pcre x86_64 8.45-1.fc37.2 copr_base 202 k pcre2 x86_64 10.40-1.fc37.1 copr_base 236 k pcre2-syntax noarch 10.40-1.fc37.1 copr_base 143 k perl-srpm-macros noarch 1-46.fc37 fedora 8.3 k pkgconf x86_64 1.8.0-3.fc37 copr_base 42 k pkgconf-m4 noarch 1.8.0-3.fc37 copr_base 15 k pkgconf-pkg-config x86_64 1.8.0-3.fc37 copr_base 11 k popt x86_64 1.19~rc1-3.fc37 fedora 65 k publicsuffix-list-dafsa noarch 20210518-5.fc37 fedora 58 k python-srpm-macros noarch 3.11-4.fc37 fedora 25 k qt5-srpm-macros noarch 5.15.5-2.fc37 fedora 8.1 k readline x86_64 8.1-7.fc37 fedora 211 k rpm x86_64 4.18.0-0.beta1.4.fc37 fedora 570 k rpm-build-libs x86_64 4.18.0-0.beta1.4.fc37 fedora 93 k rpm-libs x86_64 4.18.0-0.beta1.4.fc37 fedora 319 k rpmautospec-rpm-macros noarch 0.3.0-1.fc37 fedora 8.8 k rust-srpm-macros noarch 22-1.fc37 fedora 9.5 k setup noarch 2.14.1-2.fc37 fedora 149 k sqlite-libs x86_64 3.39.2-2.fc37 copr_base 657 k systemd-libs x86_64 251.3-2.fc37 fedora 620 k tzdata noarch 2022a-4.fc37 fedora 719 k util-linux-core x86_64 2.38.1-1.fc37 fedora 470 k xxhash-libs x86_64 0.8.1-3.fc37 fedora 41 k xz-libs x86_64 5.2.5-10.fc37 fedora 92 k zip x86_64 3.0-33.fc37 fedora 259 k zlib x86_64 1.2.12-4.fc37 copr_base 94 k zstd x86_64 1.5.2-3.fc37 fedora 447 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 152 Packages Total download size: 51 M Installed size: 177 M Downloading Packages: (1/152): authselect-1.4.0-3.fc37.x86_64.rpm 754 kB/s | 140 kB 00:00 (2/152): authselect-libs-1.4.0-3.fc37.x86_64.rp 1.1 MB/s | 235 kB 00:00 (3/152): bash-5.1.16-3.fc37.x86_64.rpm 4.5 MB/s | 1.7 MB 00:00 (4/152): binutils-gold-2.38-24.fc37.x86_64.rpm 4.1 MB/s | 779 kB 00:00 (5/152): coreutils-9.1-6.fc37.x86_64.rpm 8.2 MB/s | 1.1 MB 00:00 (6/152): binutils-2.38-24.fc37.x86_64.rpm 17 MB/s | 5.4 MB 00:00 (7/152): coreutils-common-9.1-6.fc37.x86_64.rpm 16 MB/s | 2.0 MB 00:00 (8/152): cyrus-sasl-lib-2.1.28-7.fc37.x86_64.rp 17 MB/s | 793 kB 00:00 (9/152): cpio-2.13-13.fc37.x86_64.rpm 4.9 MB/s | 270 kB 00:00 (10/152): debugedit-5.0-5.fc37.x86_64.rpm 1.9 MB/s | 77 kB 00:00 (11/152): elfutils-debuginfod-client-0.187-7.fc 1.8 MB/s | 39 kB 00:00 (12/152): elfutils-0.187-7.fc37.x86_64.rpm 15 MB/s | 523 kB 00:00 (13/152): diffutils-3.8-3.fc37.x86_64.rpm 9.6 MB/s | 370 kB 00:00 (14/152): elfutils-default-yama-scope-0.187-7.f 1.2 MB/s | 17 kB 00:00 (15/152): elfutils-libelf-0.187-7.fc37.x86_64.r 7.9 MB/s | 198 kB 00:00 (16/152): elfutils-libs-0.187-7.fc37.x86_64.rpm 8.8 MB/s | 257 kB 00:00 (17/152): file-5.42-4.fc37.x86_64.rpm 1.7 MB/s | 49 kB 00:00 (18/152): file-libs-5.42-4.fc37.x86_64.rpm 18 MB/s | 676 kB 00:00 (19/152): gmp-6.2.1-3.fc37.x86_64.rpm 9.2 MB/s | 315 kB 00:00 (20/152): grep-3.7-4.fc37.x86_64.rpm 7.5 MB/s | 263 kB 00:00 (21/152): libnsl2-2.0.0-4.fc37.x86_64.rpm 3.4 MB/s | 31 kB 00:00 (22/152): libpkgconf-1.8.0-3.fc37.x86_64.rpm 3.1 MB/s | 36 kB 00:00 (23/152): gzip-1.12-2.fc37.x86_64.rpm 7.7 MB/s | 159 kB 00:00 (24/152): libtirpc-1.3.3-0.fc37.x86_64.rpm 7.7 MB/s | 94 kB 00:00 (25/152): libtasn1-4.18.0-3.fc37.x86_64.rpm 3.2 MB/s | 75 kB 00:00 (26/152): libverto-0.3.2-4.fc37.x86_64.rpm 1.1 MB/s | 21 kB 00:00 (27/152): lua-libs-5.4.4-4.fc37.x86_64.rpm 11 MB/s | 217 kB 00:00 (28/152): pcre-8.45-1.fc37.2.x86_64.rpm 7.3 MB/s | 202 kB 00:00 (29/152): pcre2-10.40-1.fc37.1.x86_64.rpm 8.3 MB/s | 236 kB 00:00 (30/152): patch-2.7.6-17.fc37.x86_64.rpm 2.8 MB/s | 124 kB 00:00 (31/152): pcre2-syntax-10.40-1.fc37.1.noarch.rp 6.7 MB/s | 143 kB 00:00 (32/152): pkgconf-1.8.0-3.fc37.x86_64.rpm 2.4 MB/s | 42 kB 00:00 (33/152): pkgconf-m4-1.8.0-3.fc37.noarch.rpm 916 kB/s | 15 kB 00:00 (34/152): sed-4.8-11.fc37.x86_64.rpm 11 MB/s | 297 kB 00:00 (35/152): pkgconf-pkg-config-1.8.0-3.fc37.x86_6 367 kB/s | 11 kB 00:00 (36/152): sqlite-libs-3.39.2-2.fc37.x86_64.rpm 15 MB/s | 657 kB 00:00 (37/152): zlib-1.2.12-4.fc37.x86_64.rpm 4.4 MB/s | 94 kB 00:00 (38/152): tar-1.34-4.fc37.x86_64.rpm 13 MB/s | 877 kB 00:00 (39/152): ansible-srpm-macros-1-6.fc37.noarch.r 64 kB/s | 7.5 kB 00:00 (40/152): alternatives-1.19-3.fc37.x86_64.rpm 213 kB/s | 36 kB 00:00 (41/152): basesystem-11-14.fc37.noarch.rpm 135 kB/s | 7.0 kB 00:00 (42/152): bzip2-1.0.8-12.fc37.x86_64.rpm 671 kB/s | 52 kB 00:00 (43/152): bzip2-libs-1.0.8-12.fc37.x86_64.rpm 528 kB/s | 41 kB 00:00 (44/152): audit-libs-3.0.8-3.fc37.x86_64.rpm 524 kB/s | 116 kB 00:00 (45/152): crypto-policies-20220802-1.gita99dfd2 2.1 MB/s | 86 kB 00:00 (46/152): cracklib-2.9.6-28.fc36.x86_64.rpm 1.1 MB/s | 81 kB 00:00 (47/152): dwz-0.14-7.fc37.x86_64.rpm 1.6 MB/s | 129 kB 00:00 (48/152): curl-7.84.0-2.fc37.x86_64.rpm 2.6 MB/s | 313 kB 00:00 (49/152): ed-1.18-2.fc37.x86_64.rpm 1.8 MB/s | 78 kB 00:00 (50/152): efi-srpm-macros-5-6.fc37.noarch.rpm 527 kB/s | 22 kB 00:00 (51/152): fedora-release-37-0.9.noarch.rpm 381 kB/s | 11 kB 00:00 (52/152): fedora-gpg-keys-37-0.3.noarch.rpm 1.6 MB/s | 114 kB 00:00 (53/152): ca-certificates-2022.2.54-5.fc37.noar 2.9 MB/s | 829 kB 00:00 (54/152): fedora-release-common-37-0.9.noarch.r 613 kB/s | 22 kB 00:00 (55/152): fedora-release-identity-basic-37-0.9. 363 kB/s | 12 kB 00:00 (56/152): fedora-repos-37-0.3.noarch.rpm 264 kB/s | 10 kB 00:00 (57/152): fedora-repos-rawhide-37-0.3.noarch.rp 243 kB/s | 9.8 kB 00:00 (58/152): fonts-srpm-macros-2.0.5-8.fc37.noarch 568 kB/s | 26 kB 00:00 (59/152): fpc-srpm-macros-1.3-6.fc37.noarch.rpm 145 kB/s | 7.7 kB 00:00 (60/152): findutils-4.9.0-2.fc37.x86_64.rpm 2.4 MB/s | 492 kB 00:00 (61/152): filesystem-3.18-1.fc37.x86_64.rpm 2.0 MB/s | 1.1 MB 00:00 (62/152): gawk-5.1.1-4.fc37.x86_64.rpm 2.3 MB/s | 1.0 MB 00:00 (63/152): gdbm-libs-1.23-2.fc37.x86_64.rpm 1.0 MB/s | 56 kB 00:00 (64/152): ghc-srpm-macros-1.5.0-7.fc37.noarch.r 131 kB/s | 7.8 kB 00:00 (65/152): glibc-common-2.36-1.fc37.x86_64.rpm 1.8 MB/s | 359 kB 00:00 (66/152): glibc-gconv-extra-2.36-1.fc37.x86_64. 3.3 MB/s | 1.6 MB 00:00 (67/152): gdb-minimal-12.1-4.fc37.x86_64.rpm 3.6 MB/s | 3.9 MB 00:01 (68/152): glibc-2.36-1.fc37.x86_64.rpm 2.8 MB/s | 2.1 MB 00:00 (69/152): glibc-minimal-langpack-2.36-1.fc37.x8 1.2 MB/s | 81 kB 00:00 (70/152): gnat-srpm-macros-4-16.fc37.noarch.rpm 136 kB/s | 8.3 kB 00:00 (71/152): go-srpm-macros-3.0.15-3.fc37.noarch.r 479 kB/s | 26 kB 00:00 (72/152): info-6.8-4.fc37.x86_64.rpm 3.3 MB/s | 225 kB 00:00 (73/152): jansson-2.13.1-5.fc37.x86_64.rpm 706 kB/s | 44 kB 00:00 (74/152): kernel-srpm-macros-1.0-15.fc37.noarch 150 kB/s | 9.4 kB 00:00 (75/152): keyutils-libs-1.6.1-5.fc37.x86_64.rpm 571 kB/s | 31 kB 00:00 (76/152): libarchive-3.6.1-2.fc37.x86_64.rpm 3.8 MB/s | 397 kB 00:00 (77/152): krb5-libs-1.19.2-11.fc37.1.x86_64.rpm 4.4 MB/s | 727 kB 00:00 (78/152): libattr-2.5.1-5.fc37.x86_64.rpm 309 kB/s | 18 kB 00:00 (79/152): libblkid-2.38.1-1.fc37.x86_64.rpm 1.9 MB/s | 107 kB 00:00 (80/152): libcap-2.48-5.fc37.x86_64.rpm 1.2 MB/s | 67 kB 00:00 (81/152): libbrotli-1.0.9-9.fc37.x86_64.rpm 3.1 MB/s | 315 kB 00:00 (82/152): libcap-ng-0.8.3-3.fc37.x86_64.rpm 684 kB/s | 33 kB 00:00 (83/152): libcom_err-1.46.5-3.fc37.x86_64.rpm 448 kB/s | 25 kB 00:00 (84/152): libcurl-7.84.0-2.fc37.x86_64.rpm 4.8 MB/s | 306 kB 00:00 (85/152): libeconf-0.4.0-4.fc37.x86_64.rpm 512 kB/s | 27 kB 00:00 (86/152): libacl-2.3.1-4.fc37.x86_64.rpm 50 kB/s | 23 kB 00:00 (87/152): libevent-2.1.12-7.fc37.x86_64.rpm 4.3 MB/s | 261 kB 00:00 (88/152): libdb-5.3.28-53.fc37.x86_64.rpm 4.0 MB/s | 760 kB 00:00 (89/152): libffi-3.4.2-9.fc37.x86_64.rpm 514 kB/s | 37 kB 00:00 (90/152): libgcc-12.1.1-3.fc37.1.x86_64.rpm 1.6 MB/s | 105 kB 00:00 (91/152): libgomp-12.1.1-3.fc37.1.x86_64.rpm 4.9 MB/s | 292 kB 00:00 (92/152): libidn2-2.3.3-2.fc37.x86_64.rpm 2.1 MB/s | 113 kB 00:00 (93/152): libmount-2.38.1-1.fc37.x86_64.rpm 2.6 MB/s | 135 kB 00:00 (94/152): libnghttp2-1.48.0-2.fc37.x86_64.rpm 1.3 MB/s | 75 kB 00:00 (95/152): libpsl-0.21.1-6.fc37.x86_64.rpm 1.1 MB/s | 63 kB 00:00 (96/152): libpwquality-1.4.4-11.fc37.x86_64.rpm 2.5 MB/s | 116 kB 00:00 (97/152): libselinux-3.4-5.fc37.x86_64.rpm 1.6 MB/s | 86 kB 00:00 (98/152): libfdisk-2.38.1-1.fc37.x86_64.rpm 468 kB/s | 160 kB 00:00 (99/152): libsemanage-3.4-5.fc37.x86_64.rpm 2.2 MB/s | 120 kB 00:00 (100/152): libsepol-3.4-3.fc37.x86_64.rpm 5.2 MB/s | 322 kB 00:00 (101/152): libsigsegv-2.14-3.fc37.x86_64.rpm 475 kB/s | 27 kB 00:00 (102/152): libsmartcols-2.38.1-1.fc37.x86_64.rp 1.1 MB/s | 64 kB 00:00 (103/152): libssh-0.9.6-5.fc37.x86_64.rpm 3.5 MB/s | 203 kB 00:00 (104/152): libssh-config-0.9.6-5.fc37.noarch.rp 136 kB/s | 7.8 kB 00:00 (105/152): libutempter-1.2.1-7.fc37.x86_64.rpm 407 kB/s | 26 kB 00:00 (106/152): libunistring-1.0-2.fc37.x86_64.rpm 4.6 MB/s | 549 kB 00:00 (107/152): libuuid-2.38.1-1.fc37.x86_64.rpm 553 kB/s | 28 kB 00:00 (108/152): libstdc++-12.1.1-3.fc37.1.x86_64.rpm 4.5 MB/s | 797 kB 00:00 (109/152): libxcrypt-4.4.28-2.fc37.x86_64.rpm 2.3 MB/s | 118 kB 00:00 (110/152): libzstd-1.5.2-3.fc37.x86_64.rpm 5.9 MB/s | 294 kB 00:00 (111/152): lua-srpm-macros-1-7.fc37.noarch.rpm 176 kB/s | 8.8 kB 00:00 (112/152): lz4-libs-1.9.3-5.fc37.x86_64.rpm 1.6 MB/s | 70 kB 00:00 (113/152): mpfr-4.1.0-10.fc37.x86_64.rpm 4.9 MB/s | 331 kB 00:00 (114/152): ncurses-base-6.3-3.20220501.fc37.noa 1.5 MB/s | 86 kB 00:00 (115/152): ncurses-libs-6.3-3.20220501.fc37.x86 6.8 MB/s | 329 kB 00:00 (116/152): nim-srpm-macros-3-7.fc37.noarch.rpm 184 kB/s | 8.4 kB 00:00 (117/152): ocaml-srpm-macros-7-2.fc37.noarch.rp 253 kB/s | 13 kB 00:00 (118/152): libxml2-2.9.14-3.fc37.x86_64.rpm 2.9 MB/s | 752 kB 00:00 (119/152): openblas-srpm-macros-2-12.fc37.noarc 119 kB/s | 7.5 kB 00:00 (120/152): openldap-2.6.2-4.fc37.x86_64.rpm 4.8 MB/s | 254 kB 00:00 (121/152): p11-kit-trust-0.24.1-3.fc37.x86_64.r 2.3 MB/s | 138 kB 00:00 (122/152): p11-kit-0.24.1-3.fc37.x86_64.rpm 3.4 MB/s | 376 kB 00:00 (123/152): package-notes-srpm-macros-0.4-16.fc3 181 kB/s | 11 kB 00:00 (124/152): pam-libs-1.5.2-14.fc37.x86_64.rpm 1.1 MB/s | 58 kB 00:00 (125/152): pam-1.5.2-14.fc37.x86_64.rpm 4.8 MB/s | 560 kB 00:00 (126/152): perl-srpm-macros-1-46.fc37.noarch.rp 141 kB/s | 8.3 kB 00:00 (127/152): popt-1.19~rc1-3.fc37.x86_64.rpm 1.1 MB/s | 65 kB 00:00 (128/152): publicsuffix-list-dafsa-20210518-5.f 1.1 MB/s | 58 kB 00:00 (129/152): python-srpm-macros-3.11-4.fc37.noarc 460 kB/s | 25 kB 00:00 (130/152): qt5-srpm-macros-5.15.5-2.fc37.noarch 119 kB/s | 8.1 kB 00:00 (131/152): readline-8.1-7.fc37.x86_64.rpm 3.0 MB/s | 211 kB 00:00 (132/152): redhat-rpm-config-226-1.fc37.noarch. 1.3 MB/s | 74 kB 00:00 (133/152): rpm-build-4.18.0-0.beta1.4.fc37.x86_ 1.3 MB/s | 76 kB 00:00 (134/152): rpm-4.18.0-0.beta1.4.fc37.x86_64.rpm 4.8 MB/s | 570 kB 00:00 (135/152): rpm-build-libs-4.18.0-0.beta1.4.fc37 1.4 MB/s | 93 kB 00:00 (136/152): rpm-libs-4.18.0-0.beta1.4.fc37.x86_6 4.8 MB/s | 319 kB 00:00 (137/152): openssl-libs-3.0.5-2.fc37.x86_64.rpm 3.5 MB/s | 2.1 MB 00:00 (138/152): rpmautospec-rpm-macros-0.3.0-1.fc37. 160 kB/s | 8.8 kB 00:00 (139/152): rust-srpm-macros-22-1.fc37.noarch.rp 226 kB/s | 9.5 kB 00:00 (140/152): setup-2.14.1-2.fc37.noarch.rpm 3.1 MB/s | 149 kB 00:00 (141/152): systemd-libs-251.3-2.fc37.x86_64.rpm 6.6 MB/s | 620 kB 00:00 (142/152): unzip-6.0-58.fc37.x86_64.rpm 3.4 MB/s | 182 kB 00:00 (143/152): tzdata-2022a-4.fc37.noarch.rpm 5.1 MB/s | 719 kB 00:00 (144/152): shadow-utils-4.11.1-4.fc37.x86_64.rp 6.2 MB/s | 1.1 MB 00:00 (145/152): which-2.21-35.fc37.x86_64.rpm 925 kB/s | 41 kB 00:00 (146/152): util-linux-core-2.38.1-1.fc37.x86_64 5.0 MB/s | 470 kB 00:00 (147/152): xxhash-libs-0.8.1-3.fc37.x86_64.rpm 815 kB/s | 41 kB 00:00 (148/152): xz-5.2.5-10.fc37.x86_64.rpm 4.9 MB/s | 223 kB 00:00 (149/152): xz-libs-5.2.5-10.fc37.x86_64.rpm 2.1 MB/s | 92 kB 00:00 (150/152): zip-3.0-33.fc37.x86_64.rpm 6.3 MB/s | 259 kB 00:00 (151/152): zstd-1.5.2-3.fc37.x86_64.rpm 5.9 MB/s | 447 kB 00:00 (152/152): util-linux-2.38.1-1.fc37.x86_64.rpm 9.2 MB/s | 2.3 MB 00:00 -------------------------------------------------------------------------------- Total 9.8 MB/s | 51 MB 00:05 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x5323552A: Userid : "Fedora (37) " Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary (0x5323552A) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x38AB71F4: Userid : "Fedora (36) " Fingerprint: 53DE D2CB 922D 8B8D 9E63 FD18 999F 7CBF 38AB 71F4 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-36-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-1.fc37.x86_64 1/1 Preparing : 1/1 Installing : libgcc-12.1.1-3.fc37.1.x86_64 1/152 Running scriptlet: libgcc-12.1.1-3.fc37.1.x86_64 1/152 Installing : crypto-policies-20220802-1.gita99dfd2.fc37.noarc 2/152 Running scriptlet: crypto-policies-20220802-1.gita99dfd2.fc37.noarc 2/152 Installing : fedora-release-identity-basic-37-0.9.noarch 3/152 Installing : tzdata-2022a-4.fc37.noarch 4/152 Installing : rust-srpm-macros-22-1.fc37.noarch 5/152 Installing : qt5-srpm-macros-5.15.5-2.fc37.noarch 6/152 Installing : publicsuffix-list-dafsa-20210518-5.fc37.noarch 7/152 Installing : perl-srpm-macros-1-46.fc37.noarch 8/152 Installing : openblas-srpm-macros-2-12.fc37.noarch 9/152 Installing : ocaml-srpm-macros-7-2.fc37.noarch 10/152 Installing : nim-srpm-macros-3-7.fc37.noarch 11/152 Installing : ncurses-base-6.3-3.20220501.fc37.noarch 12/152 Installing : libssh-config-0.9.6-5.fc37.noarch 13/152 Installing : kernel-srpm-macros-1.0-15.fc37.noarch 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scriptlet: ca-certificates-2022.2.54-5.fc37.noarch 152/152 Running scriptlet: authselect-libs-1.4.0-3.fc37.x86_64 152/152 Running scriptlet: rpm-4.18.0-0.beta1.4.fc37.x86_64 152/152 Running scriptlet: info-6.8-4.fc37.x86_64 152/152 Verifying : authselect-1.4.0-3.fc37.x86_64 1/152 Verifying : authselect-libs-1.4.0-3.fc37.x86_64 2/152 Verifying : bash-5.1.16-3.fc37.x86_64 3/152 Verifying : binutils-2.38-24.fc37.x86_64 4/152 Verifying : binutils-gold-2.38-24.fc37.x86_64 5/152 Verifying : coreutils-9.1-6.fc37.x86_64 6/152 Verifying : coreutils-common-9.1-6.fc37.x86_64 7/152 Verifying : cpio-2.13-13.fc37.x86_64 8/152 Verifying : cyrus-sasl-lib-2.1.28-7.fc37.x86_64 9/152 Verifying : debugedit-5.0-5.fc37.x86_64 10/152 Verifying : diffutils-3.8-3.fc37.x86_64 11/152 Verifying : elfutils-0.187-7.fc37.x86_64 12/152 Verifying : elfutils-debuginfod-client-0.187-7.fc37.x86_64 13/152 Verifying : elfutils-default-yama-scope-0.187-7.fc37.noarch 14/152 Verifying : elfutils-libelf-0.187-7.fc37.x86_64 15/152 Verifying : elfutils-libs-0.187-7.fc37.x86_64 16/152 Verifying : file-5.42-4.fc37.x86_64 17/152 Verifying : file-libs-5.42-4.fc37.x86_64 18/152 Verifying : gmp-1:6.2.1-3.fc37.x86_64 19/152 Verifying : grep-3.7-4.fc37.x86_64 20/152 Verifying : gzip-1.12-2.fc37.x86_64 21/152 Verifying : libnsl2-2.0.0-4.fc37.x86_64 22/152 Verifying : libpkgconf-1.8.0-3.fc37.x86_64 23/152 Verifying : libtasn1-4.18.0-3.fc37.x86_64 24/152 Verifying : libtirpc-1.3.3-0.fc37.x86_64 25/152 Verifying : libverto-0.3.2-4.fc37.x86_64 26/152 Verifying : lua-libs-5.4.4-4.fc37.x86_64 27/152 Verifying : patch-2.7.6-17.fc37.x86_64 28/152 Verifying : pcre-8.45-1.fc37.2.x86_64 29/152 Verifying : pcre2-10.40-1.fc37.1.x86_64 30/152 Verifying : pcre2-syntax-10.40-1.fc37.1.noarch 31/152 Verifying : pkgconf-1.8.0-3.fc37.x86_64 32/152 Verifying : pkgconf-m4-1.8.0-3.fc37.noarch 33/152 Verifying : pkgconf-pkg-config-1.8.0-3.fc37.x86_64 34/152 Verifying : sed-4.8-11.fc37.x86_64 35/152 Verifying : sqlite-libs-3.39.2-2.fc37.x86_64 36/152 Verifying : tar-2:1.34-4.fc37.x86_64 37/152 Verifying : zlib-1.2.12-4.fc37.x86_64 38/152 Verifying : alternatives-1.19-3.fc37.x86_64 39/152 Verifying : ansible-srpm-macros-1-6.fc37.noarch 40/152 Verifying : audit-libs-3.0.8-3.fc37.x86_64 41/152 Verifying : basesystem-11-14.fc37.noarch 42/152 Verifying : bzip2-1.0.8-12.fc37.x86_64 43/152 Verifying : bzip2-libs-1.0.8-12.fc37.x86_64 44/152 Verifying : ca-certificates-2022.2.54-5.fc37.noarch 45/152 Verifying : cracklib-2.9.6-28.fc36.x86_64 46/152 Verifying : crypto-policies-20220802-1.gita99dfd2.fc37.noarc 47/152 Verifying : curl-7.84.0-2.fc37.x86_64 48/152 Verifying : dwz-0.14-7.fc37.x86_64 49/152 Verifying : ed-1.18-2.fc37.x86_64 50/152 Verifying : efi-srpm-macros-5-6.fc37.noarch 51/152 Verifying : fedora-gpg-keys-37-0.3.noarch 52/152 Verifying : fedora-release-37-0.9.noarch 53/152 Verifying : fedora-release-common-37-0.9.noarch 54/152 Verifying : fedora-release-identity-basic-37-0.9.noarch 55/152 Verifying : fedora-repos-37-0.3.noarch 56/152 Verifying : fedora-repos-rawhide-37-0.3.noarch 57/152 Verifying : filesystem-3.18-1.fc37.x86_64 58/152 Verifying : findutils-1:4.9.0-2.fc37.x86_64 59/152 Verifying : fonts-srpm-macros-1:2.0.5-8.fc37.noarch 60/152 Verifying : fpc-srpm-macros-1.3-6.fc37.noarch 61/152 Verifying : gawk-5.1.1-4.fc37.x86_64 62/152 Verifying : gdb-minimal-12.1-4.fc37.x86_64 63/152 Verifying : gdbm-libs-1:1.23-2.fc37.x86_64 64/152 Verifying : ghc-srpm-macros-1.5.0-7.fc37.noarch 65/152 Verifying : glibc-2.36-1.fc37.x86_64 66/152 Verifying : glibc-common-2.36-1.fc37.x86_64 67/152 Verifying : glibc-gconv-extra-2.36-1.fc37.x86_64 68/152 Verifying : glibc-minimal-langpack-2.36-1.fc37.x86_64 69/152 Verifying : gnat-srpm-macros-4-16.fc37.noarch 70/152 Verifying : go-srpm-macros-3.0.15-3.fc37.noarch 71/152 Verifying : info-6.8-4.fc37.x86_64 72/152 Verifying : jansson-2.13.1-5.fc37.x86_64 73/152 Verifying : kernel-srpm-macros-1.0-15.fc37.noarch 74/152 Verifying : keyutils-libs-1.6.1-5.fc37.x86_64 75/152 Verifying : krb5-libs-1.19.2-11.fc37.1.x86_64 76/152 Verifying : libacl-2.3.1-4.fc37.x86_64 77/152 Verifying : libarchive-3.6.1-2.fc37.x86_64 78/152 Verifying : libattr-2.5.1-5.fc37.x86_64 79/152 Verifying : libblkid-2.38.1-1.fc37.x86_64 80/152 Verifying : libbrotli-1.0.9-9.fc37.x86_64 81/152 Verifying : libcap-2.48-5.fc37.x86_64 82/152 Verifying : libcap-ng-0.8.3-3.fc37.x86_64 83/152 Verifying : libcom_err-1.46.5-3.fc37.x86_64 84/152 Verifying : libcurl-7.84.0-2.fc37.x86_64 85/152 Verifying : libdb-5.3.28-53.fc37.x86_64 86/152 Verifying : libeconf-0.4.0-4.fc37.x86_64 87/152 Verifying : libevent-2.1.12-7.fc37.x86_64 88/152 Verifying : libfdisk-2.38.1-1.fc37.x86_64 89/152 Verifying : libffi-3.4.2-9.fc37.x86_64 90/152 Verifying : libgcc-12.1.1-3.fc37.1.x86_64 91/152 Verifying : libgomp-12.1.1-3.fc37.1.x86_64 92/152 Verifying : libidn2-2.3.3-2.fc37.x86_64 93/152 Verifying : libmount-2.38.1-1.fc37.x86_64 94/152 Verifying : libnghttp2-1.48.0-2.fc37.x86_64 95/152 Verifying : libpsl-0.21.1-6.fc37.x86_64 96/152 Verifying : libpwquality-1.4.4-11.fc37.x86_64 97/152 Verifying : libselinux-3.4-5.fc37.x86_64 98/152 Verifying : libsemanage-3.4-5.fc37.x86_64 99/152 Verifying : libsepol-3.4-3.fc37.x86_64 100/152 Verifying : libsigsegv-2.14-3.fc37.x86_64 101/152 Verifying : libsmartcols-2.38.1-1.fc37.x86_64 102/152 Verifying : libssh-0.9.6-5.fc37.x86_64 103/152 Verifying : libssh-config-0.9.6-5.fc37.noarch 104/152 Verifying : libstdc++-12.1.1-3.fc37.1.x86_64 105/152 Verifying : libunistring-1.0-2.fc37.x86_64 106/152 Verifying : libutempter-1.2.1-7.fc37.x86_64 107/152 Verifying : libuuid-2.38.1-1.fc37.x86_64 108/152 Verifying : libxcrypt-4.4.28-2.fc37.x86_64 109/152 Verifying : libxml2-2.9.14-3.fc37.x86_64 110/152 Verifying : libzstd-1.5.2-3.fc37.x86_64 111/152 Verifying : lua-srpm-macros-1-7.fc37.noarch 112/152 Verifying : lz4-libs-1.9.3-5.fc37.x86_64 113/152 Verifying : mpfr-4.1.0-10.fc37.x86_64 114/152 Verifying : ncurses-base-6.3-3.20220501.fc37.noarch 115/152 Verifying : ncurses-libs-6.3-3.20220501.fc37.x86_64 116/152 Verifying : nim-srpm-macros-3-7.fc37.noarch 117/152 Verifying : ocaml-srpm-macros-7-2.fc37.noarch 118/152 Verifying : openblas-srpm-macros-2-12.fc37.noarch 119/152 Verifying : openldap-2.6.2-4.fc37.x86_64 120/152 Verifying : openssl-libs-1:3.0.5-2.fc37.x86_64 121/152 Verifying : p11-kit-0.24.1-3.fc37.x86_64 122/152 Verifying : p11-kit-trust-0.24.1-3.fc37.x86_64 123/152 Verifying : package-notes-srpm-macros-0.4-16.fc37.noarch 124/152 Verifying : pam-1.5.2-14.fc37.x86_64 125/152 Verifying : pam-libs-1.5.2-14.fc37.x86_64 126/152 Verifying : perl-srpm-macros-1-46.fc37.noarch 127/152 Verifying : popt-1.19~rc1-3.fc37.x86_64 128/152 Verifying : publicsuffix-list-dafsa-20210518-5.fc37.noarch 129/152 Verifying : python-srpm-macros-3.11-4.fc37.noarch 130/152 Verifying : qt5-srpm-macros-5.15.5-2.fc37.noarch 131/152 Verifying : readline-8.1-7.fc37.x86_64 132/152 Verifying : redhat-rpm-config-226-1.fc37.noarch 133/152 Verifying : rpm-4.18.0-0.beta1.4.fc37.x86_64 134/152 Verifying : rpm-build-4.18.0-0.beta1.4.fc37.x86_64 135/152 Verifying : rpm-build-libs-4.18.0-0.beta1.4.fc37.x86_64 136/152 Verifying : rpm-libs-4.18.0-0.beta1.4.fc37.x86_64 137/152 Verifying : rpmautospec-rpm-macros-0.3.0-1.fc37.noarch 138/152 Verifying : rust-srpm-macros-22-1.fc37.noarch 139/152 Verifying : setup-2.14.1-2.fc37.noarch 140/152 Verifying : shadow-utils-2:4.11.1-4.fc37.x86_64 141/152 Verifying : systemd-libs-251.3-2.fc37.x86_64 142/152 Verifying : tzdata-2022a-4.fc37.noarch 143/152 Verifying : unzip-6.0-58.fc37.x86_64 144/152 Verifying : util-linux-2.38.1-1.fc37.x86_64 145/152 Verifying : util-linux-core-2.38.1-1.fc37.x86_64 146/152 Verifying : which-2.21-35.fc37.x86_64 147/152 Verifying : xxhash-libs-0.8.1-3.fc37.x86_64 148/152 Verifying : xz-5.2.5-10.fc37.x86_64 149/152 Verifying : xz-libs-5.2.5-10.fc37.x86_64 150/152 Verifying : zip-3.0-33.fc37.x86_64 151/152 Verifying : zstd-1.5.2-3.fc37.x86_64 152/152 Installed: alternatives-1.19-3.fc37.x86_64 ansible-srpm-macros-1-6.fc37.noarch audit-libs-3.0.8-3.fc37.x86_64 authselect-1.4.0-3.fc37.x86_64 authselect-libs-1.4.0-3.fc37.x86_64 basesystem-11-14.fc37.noarch bash-5.1.16-3.fc37.x86_64 binutils-2.38-24.fc37.x86_64 binutils-gold-2.38-24.fc37.x86_64 bzip2-1.0.8-12.fc37.x86_64 bzip2-libs-1.0.8-12.fc37.x86_64 ca-certificates-2022.2.54-5.fc37.noarch coreutils-9.1-6.fc37.x86_64 coreutils-common-9.1-6.fc37.x86_64 cpio-2.13-13.fc37.x86_64 cracklib-2.9.6-28.fc36.x86_64 crypto-policies-20220802-1.gita99dfd2.fc37.noarch curl-7.84.0-2.fc37.x86_64 cyrus-sasl-lib-2.1.28-7.fc37.x86_64 debugedit-5.0-5.fc37.x86_64 diffutils-3.8-3.fc37.x86_64 dwz-0.14-7.fc37.x86_64 ed-1.18-2.fc37.x86_64 efi-srpm-macros-5-6.fc37.noarch elfutils-0.187-7.fc37.x86_64 elfutils-debuginfod-client-0.187-7.fc37.x86_64 elfutils-default-yama-scope-0.187-7.fc37.noarch elfutils-libelf-0.187-7.fc37.x86_64 elfutils-libs-0.187-7.fc37.x86_64 fedora-gpg-keys-37-0.3.noarch fedora-release-37-0.9.noarch fedora-release-common-37-0.9.noarch fedora-release-identity-basic-37-0.9.noarch fedora-repos-37-0.3.noarch fedora-repos-rawhide-37-0.3.noarch file-5.42-4.fc37.x86_64 file-libs-5.42-4.fc37.x86_64 filesystem-3.18-1.fc37.x86_64 findutils-1:4.9.0-2.fc37.x86_64 fonts-srpm-macros-1:2.0.5-8.fc37.noarch fpc-srpm-macros-1.3-6.fc37.noarch gawk-5.1.1-4.fc37.x86_64 gdb-minimal-12.1-4.fc37.x86_64 gdbm-libs-1:1.23-2.fc37.x86_64 ghc-srpm-macros-1.5.0-7.fc37.noarch glibc-2.36-1.fc37.x86_64 glibc-common-2.36-1.fc37.x86_64 glibc-gconv-extra-2.36-1.fc37.x86_64 glibc-minimal-langpack-2.36-1.fc37.x86_64 gmp-1:6.2.1-3.fc37.x86_64 gnat-srpm-macros-4-16.fc37.noarch go-srpm-macros-3.0.15-3.fc37.noarch grep-3.7-4.fc37.x86_64 gzip-1.12-2.fc37.x86_64 info-6.8-4.fc37.x86_64 jansson-2.13.1-5.fc37.x86_64 kernel-srpm-macros-1.0-15.fc37.noarch keyutils-libs-1.6.1-5.fc37.x86_64 krb5-libs-1.19.2-11.fc37.1.x86_64 libacl-2.3.1-4.fc37.x86_64 libarchive-3.6.1-2.fc37.x86_64 libattr-2.5.1-5.fc37.x86_64 libblkid-2.38.1-1.fc37.x86_64 libbrotli-1.0.9-9.fc37.x86_64 libcap-2.48-5.fc37.x86_64 libcap-ng-0.8.3-3.fc37.x86_64 libcom_err-1.46.5-3.fc37.x86_64 libcurl-7.84.0-2.fc37.x86_64 libdb-5.3.28-53.fc37.x86_64 libeconf-0.4.0-4.fc37.x86_64 libevent-2.1.12-7.fc37.x86_64 libfdisk-2.38.1-1.fc37.x86_64 libffi-3.4.2-9.fc37.x86_64 libgcc-12.1.1-3.fc37.1.x86_64 libgomp-12.1.1-3.fc37.1.x86_64 libidn2-2.3.3-2.fc37.x86_64 libmount-2.38.1-1.fc37.x86_64 libnghttp2-1.48.0-2.fc37.x86_64 libnsl2-2.0.0-4.fc37.x86_64 libpkgconf-1.8.0-3.fc37.x86_64 libpsl-0.21.1-6.fc37.x86_64 libpwquality-1.4.4-11.fc37.x86_64 libselinux-3.4-5.fc37.x86_64 libsemanage-3.4-5.fc37.x86_64 libsepol-3.4-3.fc37.x86_64 libsigsegv-2.14-3.fc37.x86_64 libsmartcols-2.38.1-1.fc37.x86_64 libssh-0.9.6-5.fc37.x86_64 libssh-config-0.9.6-5.fc37.noarch libstdc++-12.1.1-3.fc37.1.x86_64 libtasn1-4.18.0-3.fc37.x86_64 libtirpc-1.3.3-0.fc37.x86_64 libunistring-1.0-2.fc37.x86_64 libutempter-1.2.1-7.fc37.x86_64 libuuid-2.38.1-1.fc37.x86_64 libverto-0.3.2-4.fc37.x86_64 libxcrypt-4.4.28-2.fc37.x86_64 libxml2-2.9.14-3.fc37.x86_64 libzstd-1.5.2-3.fc37.x86_64 lua-libs-5.4.4-4.fc37.x86_64 lua-srpm-macros-1-7.fc37.noarch lz4-libs-1.9.3-5.fc37.x86_64 mpfr-4.1.0-10.fc37.x86_64 ncurses-base-6.3-3.20220501.fc37.noarch ncurses-libs-6.3-3.20220501.fc37.x86_64 nim-srpm-macros-3-7.fc37.noarch ocaml-srpm-macros-7-2.fc37.noarch openblas-srpm-macros-2-12.fc37.noarch openldap-2.6.2-4.fc37.x86_64 openssl-libs-1:3.0.5-2.fc37.x86_64 p11-kit-0.24.1-3.fc37.x86_64 p11-kit-trust-0.24.1-3.fc37.x86_64 package-notes-srpm-macros-0.4-16.fc37.noarch pam-1.5.2-14.fc37.x86_64 pam-libs-1.5.2-14.fc37.x86_64 patch-2.7.6-17.fc37.x86_64 pcre-8.45-1.fc37.2.x86_64 pcre2-10.40-1.fc37.1.x86_64 pcre2-syntax-10.40-1.fc37.1.noarch perl-srpm-macros-1-46.fc37.noarch pkgconf-1.8.0-3.fc37.x86_64 pkgconf-m4-1.8.0-3.fc37.noarch pkgconf-pkg-config-1.8.0-3.fc37.x86_64 popt-1.19~rc1-3.fc37.x86_64 publicsuffix-list-dafsa-20210518-5.fc37.noarch python-srpm-macros-3.11-4.fc37.noarch qt5-srpm-macros-5.15.5-2.fc37.noarch readline-8.1-7.fc37.x86_64 redhat-rpm-config-226-1.fc37.noarch rpm-4.18.0-0.beta1.4.fc37.x86_64 rpm-build-4.18.0-0.beta1.4.fc37.x86_64 rpm-build-libs-4.18.0-0.beta1.4.fc37.x86_64 rpm-libs-4.18.0-0.beta1.4.fc37.x86_64 rpmautospec-rpm-macros-0.3.0-1.fc37.noarch rust-srpm-macros-22-1.fc37.noarch sed-4.8-11.fc37.x86_64 setup-2.14.1-2.fc37.noarch shadow-utils-2:4.11.1-4.fc37.x86_64 sqlite-libs-3.39.2-2.fc37.x86_64 systemd-libs-251.3-2.fc37.x86_64 tar-2:1.34-4.fc37.x86_64 tzdata-2022a-4.fc37.noarch unzip-6.0-58.fc37.x86_64 util-linux-2.38.1-1.fc37.x86_64 util-linux-core-2.38.1-1.fc37.x86_64 which-2.21-35.fc37.x86_64 xxhash-libs-0.8.1-3.fc37.x86_64 xz-5.2.5-10.fc37.x86_64 xz-libs-5.2.5-10.fc37.x86_64 zip-3.0-33.fc37.x86_64 zlib-1.2.12-4.fc37.x86_64 zstd-1.5.2-3.fc37.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: libpkgconf-1.8.0-3.fc37.x86_64 efi-srpm-macros-5-6.fc37.noarch sed-4.8-11.fc37.x86_64 elfutils-0.187-7.fc37.x86_64 which-2.21-35.fc37.x86_64 debugedit-5.0-5.fc37.x86_64 dwz-0.14-7.fc37.x86_64 authselect-libs-1.4.0-3.fc37.x86_64 libssh-0.9.6-5.fc37.x86_64 rpmautospec-rpm-macros-0.3.0-1.fc37.noarch elfutils-libs-0.187-7.fc37.x86_64 gpg-pubkey-38ab71f4-60242b08 libcap-2.48-5.fc37.x86_64 kernel-srpm-macros-1.0-15.fc37.noarch nim-srpm-macros-3-7.fc37.noarch coreutils-9.1-6.fc37.x86_64 file-libs-5.42-4.fc37.x86_64 qt5-srpm-macros-5.15.5-2.fc37.noarch libacl-2.3.1-4.fc37.x86_64 rpm-4.18.0-0.beta1.4.fc37.x86_64 basesystem-11-14.fc37.noarch openblas-srpm-macros-2-12.fc37.noarch bzip2-libs-1.0.8-12.fc37.x86_64 libunistring-1.0-2.fc37.x86_64 rust-srpm-macros-22-1.fc37.noarch xxhash-libs-0.8.1-3.fc37.x86_64 systemd-libs-251.3-2.fc37.x86_64 patch-2.7.6-17.fc37.x86_64 findutils-4.9.0-2.fc37.x86_64 ansible-srpm-macros-1-6.fc37.noarch openssl-libs-3.0.5-2.fc37.x86_64 lua-libs-5.4.4-4.fc37.x86_64 libfdisk-2.38.1-1.fc37.x86_64 fedora-gpg-keys-37-0.3.noarch fedora-release-37-0.9.noarch glibc-minimal-langpack-2.36-1.fc37.x86_64 libzstd-1.5.2-3.fc37.x86_64 publicsuffix-list-dafsa-20210518-5.fc37.noarch fpc-srpm-macros-1.3-6.fc37.noarch libgcc-12.1.1-3.fc37.1.x86_64 libcurl-7.84.0-2.fc37.x86_64 util-linux-core-2.38.1-1.fc37.x86_64 perl-srpm-macros-1-46.fc37.noarch xz-5.2.5-10.fc37.x86_64 libpsl-0.21.1-6.fc37.x86_64 zlib-1.2.12-4.fc37.x86_64 mpfr-4.1.0-10.fc37.x86_64 redhat-rpm-config-226-1.fc37.noarch gmp-6.2.1-3.fc37.x86_64 readline-8.1-7.fc37.x86_64 libnsl2-2.0.0-4.fc37.x86_64 libattr-2.5.1-5.fc37.x86_64 libbrotli-1.0.9-9.fc37.x86_64 shadow-utils-4.11.1-4.fc37.x86_64 libgomp-12.1.1-3.fc37.1.x86_64 glibc-common-2.36-1.fc37.x86_64 keyutils-libs-1.6.1-5.fc37.x86_64 libcom_err-1.46.5-3.fc37.x86_64 tzdata-2022a-4.fc37.noarch libstdc++-12.1.1-3.fc37.1.x86_64 gpg-pubkey-5323552a-6112bcdc pcre2-syntax-10.40-1.fc37.1.noarch libselinux-3.4-5.fc37.x86_64 pkgconf-m4-1.8.0-3.fc37.noarch libevent-2.1.12-7.fc37.x86_64 cyrus-sasl-lib-2.1.28-7.fc37.x86_64 xz-libs-5.2.5-10.fc37.x86_64 coreutils-common-9.1-6.fc37.x86_64 tar-1.34-4.fc37.x86_64 libtasn1-4.18.0-3.fc37.x86_64 lz4-libs-1.9.3-5.fc37.x86_64 bzip2-1.0.8-12.fc37.x86_64 libtirpc-1.3.3-0.fc37.x86_64 zip-3.0-33.fc37.x86_64 libsepol-3.4-3.fc37.x86_64 ghc-srpm-macros-1.5.0-7.fc37.noarch libxcrypt-4.4.28-2.fc37.x86_64 libdb-5.3.28-53.fc37.x86_64 pcre2-10.40-1.fc37.1.x86_64 libnghttp2-1.48.0-2.fc37.x86_64 p11-kit-0.24.1-3.fc37.x86_64 libuuid-2.38.1-1.fc37.x86_64 gdb-minimal-12.1-4.fc37.x86_64 fonts-srpm-macros-2.0.5-8.fc37.noarch util-linux-2.38.1-1.fc37.x86_64 bash-5.1.16-3.fc37.x86_64 binutils-gold-2.38-24.fc37.x86_64 rpm-libs-4.18.0-0.beta1.4.fc37.x86_64 elfutils-libelf-0.187-7.fc37.x86_64 gzip-1.12-2.fc37.x86_64 crypto-policies-20220802-1.gita99dfd2.fc37.noarch libcap-ng-0.8.3-3.fc37.x86_64 ed-1.18-2.fc37.x86_64 go-srpm-macros-3.0.15-3.fc37.noarch binutils-2.38-24.fc37.x86_64 libsemanage-3.4-5.fc37.x86_64 file-5.42-4.fc37.x86_64 audit-libs-3.0.8-3.fc37.x86_64 glibc-2.36-1.fc37.x86_64 libeconf-0.4.0-4.fc37.x86_64 libsigsegv-2.14-3.fc37.x86_64 grep-3.7-4.fc37.x86_64 fedora-release-identity-basic-37-0.9.noarch jansson-2.13.1-5.fc37.x86_64 fedora-repos-37-0.3.noarch elfutils-default-yama-scope-0.187-7.fc37.noarch unzip-6.0-58.fc37.x86_64 filesystem-3.18-1.fc37.x86_64 pam-libs-1.5.2-14.fc37.x86_64 info-6.8-4.fc37.x86_64 fedora-release-common-37-0.9.noarch libblkid-2.38.1-1.fc37.x86_64 libmount-2.38.1-1.fc37.x86_64 cracklib-2.9.6-28.fc36.x86_64 glibc-gconv-extra-2.36-1.fc37.x86_64 zstd-1.5.2-3.fc37.x86_64 authselect-1.4.0-3.fc37.x86_64 lua-srpm-macros-1-7.fc37.noarch libidn2-2.3.3-2.fc37.x86_64 cpio-2.13-13.fc37.x86_64 openldap-2.6.2-4.fc37.x86_64 gawk-5.1.1-4.fc37.x86_64 gdbm-libs-1.23-2.fc37.x86_64 gnat-srpm-macros-4-16.fc37.noarch diffutils-3.8-3.fc37.x86_64 python-srpm-macros-3.11-4.fc37.noarch libffi-3.4.2-9.fc37.x86_64 setup-2.14.1-2.fc37.noarch ncurses-base-6.3-3.20220501.fc37.noarch libutempter-1.2.1-7.fc37.x86_64 rpm-build-libs-4.18.0-0.beta1.4.fc37.x86_64 libxml2-2.9.14-3.fc37.x86_64 curl-7.84.0-2.fc37.x86_64 pkgconf-pkg-config-1.8.0-3.fc37.x86_64 sqlite-libs-3.39.2-2.fc37.x86_64 ocaml-srpm-macros-7-2.fc37.noarch popt-1.19~rc1-3.fc37.x86_64 ca-certificates-2022.2.54-5.fc37.noarch alternatives-1.19-3.fc37.x86_64 krb5-libs-1.19.2-11.fc37.1.x86_64 libsmartcols-2.38.1-1.fc37.x86_64 libssh-config-0.9.6-5.fc37.noarch fedora-repos-rawhide-37-0.3.noarch package-notes-srpm-macros-0.4-16.fc37.noarch pkgconf-1.8.0-3.fc37.x86_64 elfutils-debuginfod-client-0.187-7.fc37.x86_64 ncurses-libs-6.3-3.20220501.fc37.x86_64 p11-kit-trust-0.24.1-3.fc37.x86_64 libpwquality-1.4.4-11.fc37.x86_64 pcre-8.45-1.fc37.2.x86_64 rpm-build-4.18.0-0.beta1.4.fc37.x86_64 libarchive-3.6.1-2.fc37.x86_64 pam-1.5.2-14.fc37.x86_64 libverto-0.3.2-4.fc37.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1659916800 Wrote: /builddir/build/SRPMS/R-4.2.1-3.fc37.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1660163346.326884/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1660163346.326884/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1660163346.326884/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-3pdl5hd6/R/R.spec) Config(child) 1 minutes 41 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=108000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/R-4.2.1-3.fc37.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1660163346.326884 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.1 starting (python version = 3.10.4, NVR = mock-3.1-1.fc35)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/R-4.2.1-3.fc37.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1660163346.326884/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1660163346.326884/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.1 INFO: Mock Version: 3.1 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1660163346.326884/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.1 INFO: Mock Version: 3.1 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 30 kB/s | 3.0 kB 00:00 Copr repository 11 MB/s | 5.1 MB 00:00 fedora 390 kB/s | 16 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for R-4.2.1-3.fc37.src.rpm Start: build setup for R-4.2.1-3.fc37.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1659916800 Wrote: /builddir/build/SRPMS/R-4.2.1-3.fc37.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 51 kB/s | 3.0 kB 00:00 fedora 370 kB/s | 16 kB 00:00 Dependencies resolved. ================================================================================================= Package Arch Version Repo Size ================================================================================================= Installing: autoconf noarch 2.71-3.fc37 fedora 733 k automake noarch 1.16.5-9.fc37 copr_base 675 k bzip2-devel x86_64 1.0.8-12.fc37 fedora 214 k cairo-devel x86_64 1.17.6-2.fc37 fedora 261 k flexiblas-devel x86_64 3.2.1-2.fc37 fedora 116 k gcc-c++ x86_64 12.1.1-3.fc37.1 fedora 13 M gcc-gfortran x86_64 12.1.1-3.fc37.1 fedora 12 M java-17-openjdk-headless x86_64 1:17.0.4.0.8-1.fc37 fedora 40 M less x86_64 590-5.fc37 copr_base 161 k libICE-devel x86_64 1.0.10-9.fc37 copr_base 46 k libSM-devel x86_64 1.2.3-11.fc37 copr_base 12 k libX11-devel x86_64 1.8.1-2.fc37 fedora 1.0 M libXmu-devel x86_64 1.1.3-9.fc37 copr_base 23 k libXt-devel x86_64 1.2.1-3.fc37 copr_base 408 k libcurl-devel x86_64 7.84.0-2.fc37 fedora 977 k libicu-devel x86_64 71.1-1.fc37 copr_base 842 k libjpeg-turbo-devel x86_64 2.1.3-2.fc37 fedora 98 k libpng-devel x86_64 2:1.6.37-13.fc37 copr_base 291 k libtiff-devel x86_64 4.4.0-4.fc37 copr_base 514 k libtool x86_64 2.4.7-2.fc37 copr_base 595 k ncurses-devel x86_64 6.3-3.20220501.fc37 fedora 547 k pango-devel x86_64 1.50.8-3.fc37 fedora 161 k pcre-devel x86_64 8.45-1.fc37.2 copr_base 470 k pcre2-devel x86_64 10.40-1.fc37.1 copr_base 474 k readline-devel x86_64 8.1-7.fc37 fedora 203 k tcl-devel x86_64 1:8.6.12-3.fc37 copr_base 163 k texinfo-tex x86_64 6.8-4.fc37 fedora 141 k texlive-collection-latexrecommended noarch 9:svn57862-59.fc37 fedora 12 k texlive-inconsolata noarch 9:svn54512-59.fc37 fedora 366 k texlive-upquote noarch 9:svn26059.v1.3-59.fc37 fedora 17 k tk-devel x86_64 1:8.6.12-3.fc37 copr_base 487 k tre-devel x86_64 0.8.0-37.20140228gitc2f5d13.fc37 fedora 12 k valgrind-devel x86_64 1:3.19.0-4.fc37 copr_base 50 k xz-devel x86_64 5.2.5-10.fc37 fedora 57 k zlib-devel x86_64 1.2.12-4.fc37 copr_base 45 k Installing dependencies: adobe-mappings-cmap noarch 20190730-4.fc37 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20190730-4.fc37 fedora 113 k adobe-mappings-pdf noarch 20190401-2.fc37 fedora 697 k alsa-lib x86_64 1.2.7.2-2.fc37 copr_base 503 k annobin-docs noarch 10.79-1.fc37 fedora 92 k annobin-plugin-gcc x86_64 10.79-1.fc37 fedora 883 k avahi-libs x86_64 0.8-17.fc37 fedora 67 k biber noarch 2.17-5.fc37 fedora 314 k brotli x86_64 1.0.9-9.fc37 fedora 315 k brotli-devel x86_64 1.0.9-9.fc37 fedora 31 k cairo x86_64 1.17.6-2.fc37 fedora 676 k cmake-filesystem x86_64 3.23.3-1.fc37 fedora 16 k copy-jdk-configs noarch 4.0-4.fc37 fedora 27 k cpp x86_64 12.1.1-3.fc37.1 fedora 11 M crypto-policies-scripts noarch 20220802-1.gita99dfd2.fc37 fedora 110 k cups-libs x86_64 1:2.4.2-3.fc37 fedora 266 k dbus-libs x86_64 1:1.14.0-3.fc37 fedora 155 k emacs-filesystem noarch 1:28.1-3.fc37 copr_base 10 k expat x86_64 2.4.8-2.fc37 copr_base 110 k flexiblas x86_64 3.2.1-2.fc37 fedora 33 k flexiblas-netlib x86_64 3.2.1-2.fc37 fedora 3.1 M flexiblas-netlib64 x86_64 3.2.1-2.fc37 fedora 3.0 M flexiblas-openblas-openmp x86_64 3.2.1-2.fc37 fedora 17 k flexiblas-openblas-openmp64 x86_64 3.2.1-2.fc37 fedora 17 k fontconfig x86_64 2.14.0-2.fc37 copr_base 276 k fontconfig-devel x86_64 2.14.0-2.fc37 copr_base 128 k fonts-filesystem noarch 1:2.0.5-8.fc37 fedora 7.9 k freetype x86_64 2.12.1-3.fc37 fedora 407 k freetype-devel x86_64 2.12.1-3.fc37 fedora 895 k fribidi x86_64 1.0.12-2.fc37 fedora 89 k fribidi-devel x86_64 1.0.12-2.fc37 fedora 30 k gc x86_64 8.0.6-4.fc37 fedora 103 k gcc x86_64 12.1.1-3.fc37.1 fedora 33 M gcc-plugin-annobin x86_64 12.1.1-3.fc37.1 fedora 50 k gettext x86_64 0.21-17.fc37.0.20220203 fedora 1.0 M gettext-libs x86_64 0.21-17.fc37.0.20220203 fedora 322 k gettext-runtime x86_64 0.21-17.fc37.0.20220203 fedora 164 k ghostscript x86_64 9.55.0-5.fc37 fedora 43 k ghostscript-tools-fonts x86_64 9.55.0-5.fc37 fedora 12 k ghostscript-tools-printing x86_64 9.55.0-5.fc37 fedora 12 k glib2 x86_64 2.73.2-7.fc37 fedora 2.7 M glib2-devel x86_64 2.73.2-7.fc37 fedora 573 k glibc-devel x86_64 2.36-1.fc37 fedora 96 k glibc-headers-x86 noarch 2.36-1.fc37 fedora 574 k gnutls x86_64 3.7.7-1.fc37 copr_base 1.1 M google-droid-sans-fonts noarch 20200215-13.fc37 fedora 2.7 M google-noto-fonts-common noarch 20201206^1.git0c78c8329-2.fc37 fedora 17 k google-noto-sans-vf-fonts noarch 20201206^1.git0c78c8329-2.fc37 fedora 728 k graphite2 x86_64 1.3.14-10.fc37 fedora 95 k graphite2-devel x86_64 1.3.14-10.fc37 fedora 20 k groff-base x86_64 1.22.4-10.fc37 fedora 1.1 M guile22 x86_64 2.2.7-6.fc37 fedora 6.5 M harfbuzz x86_64 5.1.0-2.fc37 fedora 820 k harfbuzz-devel x86_64 5.1.0-2.fc37 fedora 392 k harfbuzz-icu x86_64 5.1.0-2.fc37 fedora 16 k javapackages-filesystem noarch 6.1.0-4.fc37 fedora 13 k jbig2dec-libs x86_64 0.19-7.fc37 fedora 73 k jbigkit-libs x86_64 2.1-24.fc37 fedora 53 k kernel-headers x86_64 5.19.0-1.fc37 fedora 1.5 M langpacks-core-font-en noarch 3.0-26.fc37 fedora 10 k lcms2 x86_64 2.13.1-2.fc37 fedora 175 k libICE x86_64 1.0.10-9.fc37 copr_base 71 k libSM x86_64 1.2.3-11.fc37 copr_base 42 k libX11 x86_64 1.8.1-2.fc37 fedora 649 k libX11-common noarch 1.8.1-2.fc37 fedora 182 k libX11-xcb x86_64 1.8.1-2.fc37 fedora 12 k libXau x86_64 1.0.9-9.fc37 copr_base 31 k libXau-devel x86_64 1.0.9-9.fc37 copr_base 14 k libXaw x86_64 1.0.14-3.fc37 copr_base 203 k libXext x86_64 1.3.4-9.fc37 copr_base 39 k libXext-devel x86_64 1.3.4-9.fc37 copr_base 73 k libXft x86_64 2.3.4-3.fc37 copr_base 63 k libXft-devel x86_64 2.3.4-3.fc37 copr_base 19 k libXi x86_64 1.8-3.fc37 fedora 39 k libXmu x86_64 1.1.3-9.fc37 copr_base 75 k libXpm x86_64 3.5.13-8.fc37 copr_base 59 k libXrender x86_64 0.9.10-17.fc37 copr_base 28 k libXrender-devel x86_64 0.9.10-17.fc37 copr_base 16 k libXt x86_64 1.2.1-3.fc37 copr_base 181 k libb2 x86_64 0.98.1-7.fc37 fedora 25 k libblkid-devel x86_64 2.38.1-1.fc37 fedora 17 k libdatrie x86_64 0.2.13-4.fc37 copr_base 32 k libdatrie-devel x86_64 0.2.13-4.fc37 copr_base 134 k libffi-devel x86_64 3.4.2-9.fc37 fedora 29 k libgfortran x86_64 12.1.1-3.fc37.1 fedora 897 k libgs x86_64 9.55.0-5.fc37 fedora 3.5 M libicu x86_64 71.1-1.fc37 copr_base 10 M libijs x86_64 0.35-16.fc37 copr_base 30 k libjpeg-turbo x86_64 2.1.3-2.fc37 fedora 181 k libmount-devel x86_64 2.38.1-1.fc37 fedora 18 k libmpc x86_64 1.2.1-5.fc37 fedora 61 k libpaper x86_64 1.1.28-5.fc37 fedora 46 k libpng x86_64 2:1.6.37-13.fc37 copr_base 119 k libquadmath x86_64 12.1.1-3.fc37.1 fedora 198 k libquadmath-devel x86_64 12.1.1-3.fc37.1 fedora 39 k libselinux-devel x86_64 3.4-5.fc37 fedora 148 k libsepol-devel x86_64 3.4-3.fc37 fedora 49 k libstdc++-devel x86_64 12.1.1-3.fc37.1 fedora 2.5 M libthai x86_64 0.1.29-3.fc37 fedora 213 k libthai-devel x86_64 0.1.29-3.fc37 fedora 135 k libtiff x86_64 4.4.0-4.fc37 copr_base 198 k libtool-ltdl x86_64 2.4.7-2.fc37 copr_base 37 k libwebp x86_64 1.2.4-1.fc37 fedora 278 k libxcb x86_64 1.13.1-10.fc37 fedora 231 k libxcb-devel x86_64 1.13.1-10.fc37 fedora 1.4 M libxcrypt-devel x86_64 4.4.28-2.fc37 fedora 28 k libxml2-devel x86_64 2.9.14-3.fc37 fedora 888 k libxslt x86_64 1.1.35-3.fc37 copr_base 243 k lksctp-tools x86_64 1.0.19-2.fc37 copr_base 92 k lua x86_64 5.4.4-4.fc37 copr_base 190 k lua-posix x86_64 35.1-4.fc37 fedora 139 k m4 x86_64 1.4.19-4.fc37 copr_base 296 k mailcap noarch 2.1.53-4.fc37 fedora 33 k make x86_64 1:4.3-11.fc37 copr_base 535 k mpdecimal x86_64 2.5.1-4.fc37 fedora 102 k ncurses x86_64 6.3-3.20220501.fc37 fedora 409 k ncurses-c++-libs x86_64 6.3-3.20220501.fc37 fedora 37 k nettle x86_64 3.8-2.fc37 copr_base 414 k nspr x86_64 4.34.0-3.fc37 fedora 137 k nss x86_64 3.81.0-1.fc37 fedora 694 k nss-softokn x86_64 3.81.0-1.fc37 fedora 384 k nss-softokn-freebl x86_64 3.81.0-1.fc37 fedora 326 k nss-sysinit x86_64 3.81.0-1.fc37 fedora 20 k nss-util x86_64 3.81.0-1.fc37 fedora 87 k openblas x86_64 0.3.20-2.fc37 fedora 34 k openblas-openmp x86_64 0.3.20-2.fc37 fedora 5.1 M openblas-openmp64 x86_64 0.3.20-2.fc37 fedora 4.9 M openjpeg2 x86_64 2.5.0-2.fc37 fedora 178 k pango x86_64 1.50.8-3.fc37 fedora 342 k pcre-cpp x86_64 8.45-1.fc37.2 copr_base 26 k pcre-utf16 x86_64 8.45-1.fc37.2 copr_base 187 k pcre-utf32 x86_64 8.45-1.fc37.2 copr_base 177 k pcre2-utf16 x86_64 10.40-1.fc37.1 copr_base 216 k pcre2-utf32 x86_64 10.40-1.fc37.1 copr_base 203 k perl-Authen-SASL noarch 2.16-28.fc37 fedora 57 k perl-AutoLoader noarch 5.74-491.fc37 fedora 26 k perl-B x86_64 1.83-491.fc37 fedora 186 k perl-B-Hooks-EndOfScope noarch 0.26-4.fc37 fedora 44 k 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fedora 313 k texlive-hycolor noarch 9:svn53584-59.fc37 fedora 384 k texlive-hyperref noarch 9:svn58024-59.fc37 fedora 120 k texlive-hyph-utf8 noarch 9:svn58619-59.fc37 fedora 30 k texlive-hyphen-base noarch 9:svn58630-59.fc37 fedora 34 k texlive-hyphenex noarch 9:svn57387-59.fc37 fedora 20 k texlive-ifmtarg noarch 9:svn47544-59.fc37 fedora 15 k texlive-ifplatform noarch 9:svn45533-59.fc37 fedora 17 k texlive-iftex noarch 9:svn56594-59.fc37 fedora 21 k texlive-index noarch 9:svn24099.4.1beta-59.fc37 fedora 23 k texlive-infwarerr noarch 9:svn53023-59.fc37 fedora 295 k texlive-intcalc noarch 9:svn53168-59.fc37 fedora 432 k texlive-jknapltx noarch 9:svn19440.0-59.fc37 fedora 27 k texlive-kastrup noarch 9:svn15878.0-59.fc37 fedora 13 k texlive-knuth-lib noarch 9:svn57963-59.fc37 fedora 53 k texlive-knuth-local noarch 9:svn57963-59.fc37 fedora 46 k texlive-koma-script noarch 9:svn58585-59.fc37 fedora 6.0 M texlive-kpathsea x86_64 9:20210325-49.fc37 fedora 1.1 M texlive-kvdefinekeys noarch 9:svn53193-59.fc37 fedora 306 k texlive-kvoptions noarch 9:svn56609-59.fc37 fedora 481 k texlive-kvsetkeys noarch 9:svn53166-59.fc37 fedora 381 k texlive-l3backend noarch 9:svn59118-59.fc37 fedora 852 k texlive-l3experimental noarch 9:svn57789-59.fc37 fedora 43 k texlive-l3kernel noarch 9:svn59118-59.fc37 fedora 195 k texlive-l3packages noarch 9:svn59118-59.fc37 fedora 41 k texlive-latex noarch 9:20210325-49.fc37 fedora 22 M texlive-latex-fonts noarch 9:svn28888.0-59.fc37 fedora 50 k texlive-latexbug noarch 9:svn58151-59.fc37 fedora 203 k texlive-latexconfig noarch 9:svn53525-59.fc37 fedora 16 k texlive-letltxmacro noarch 9:svn53022-59.fc37 fedora 300 k texlive-lib x86_64 9:20210325-49.fc37 fedora 486 k texlive-lineno noarch 9:svn57866-59.fc37 fedora 76 k texlive-listings noarch 9:svn55265-59.fc37 fedora 167 k texlive-lm noarch 9:svn58637-59.fc37 fedora 12 M texlive-lm-math noarch 9:svn36915.1.959-59.fc37 fedora 448 k texlive-logreq noarch 9:svn53003-59.fc37 fedora 21 k texlive-ltabptch noarch 9:svn17533.1.74d-59.fc37 fedora 19 k texlive-ltxcmds noarch 9:svn56421-59.fc37 fedora 400 k texlive-ltxmisc noarch 9:svn21927.0-59.fc37 fedora 28 k texlive-lua-alt-getopt noarch 9:svn56414-59.fc37 fedora 13 k texlive-luabidi noarch 9:svn54512-59.fc37 fedora 20 k texlive-luahbtex x86_64 9:20210325-49.fc37 fedora 2.0 M texlive-lualatex-math noarch 9:svn56541-59.fc37 fedora 21 k texlive-lualibs noarch 9:svn57277-59.fc37 fedora 151 k texlive-luaotfload noarch 9:20210325-49.fc37 fedora 1.2 M texlive-luatex x86_64 9:20210325-49.fc37 fedora 3.8 M texlive-luatexbase noarch 9:svn52663-59.fc37 fedora 16 k texlive-lwarp noarch 9:20210325-49.fc37 fedora 3.3 M texlive-makecmds noarch 9:svn15878.0-59.fc37 fedora 16 k texlive-makeindex x86_64 9:20210325-49.fc37 fedora 435 k texlive-manfnt-font noarch 9:svn54684-59.fc37 fedora 37 k texlive-marginnote noarch 9:svn48383-59.fc37 fedora 18 k texlive-marvosym noarch 9:svn29349.2.2a-59.fc37 fedora 147 k texlive-mathpazo noarch 9:svn52663-59.fc37 fedora 90 k texlive-mathspec noarch 9:svn42773-59.fc37 fedora 24 k texlive-mathtools noarch 9:svn58856-59.fc37 fedora 38 k texlive-mdwtools noarch 9:svn15878.1.05.4-59.fc37 fedora 36 k texlive-memoir noarch 9:svn58666-59.fc37 fedora 94 k texlive-metafont x86_64 9:20210325-49.fc37 fedora 264 k texlive-metalogo noarch 9:svn18611.0.12-59.fc37 fedora 17 k texlive-mflogo noarch 9:svn42428-59.fc37 fedora 17 k texlive-mflogo-font noarch 9:svn54512-59.fc37 fedora 32 k texlive-mfnfss noarch 9:svn46036-59.fc37 fedora 17 k texlive-mfware x86_64 9:20210325-49.fc37 fedora 100 k texlive-microtype noarch 9:svn58394-59.fc37 fedora 72 k texlive-minitoc noarch 9:svn48196-59.fc37 fedora 122 k texlive-mnsymbol noarch 9:svn18651.1.4-59.fc37 fedora 4.4 M texlive-modes noarch 9:svn56303-59.fc37 fedora 306 k texlive-mparhack noarch 9:svn59066-59.fc37 fedora 18 k texlive-mptopdf noarch 9:20210325-49.fc37 fedora 52 k texlive-ms noarch 9:svn57473-59.fc37 fedora 18 k texlive-multido noarch 9:svn18302.1.42-59.fc37 fedora 18 k texlive-natbib noarch 9:svn20668.8.31b-59.fc37 fedora 31 k texlive-ncntrsbk noarch 9:svn31835.0-59.fc37 fedora 366 k texlive-newfloat noarch 9:svn52906-59.fc37 fedora 120 k texlive-notoccite noarch 9:svn18129.0-59.fc37 fedora 13 k texlive-ntgclass noarch 9:svn56959-59.fc37 fedora 35 k texlive-oberdiek noarch 9:20210325-49.fc37 fedora 8.6 M texlive-pagesel noarch 9:svn56105-59.fc37 fedora 341 k texlive-palatino noarch 9:svn31835.0-59.fc37 fedora 428 k texlive-paralist noarch 9:svn43021-59.fc37 fedora 18 k texlive-parallel noarch 9:svn15878.0-59.fc37 fedora 18 k texlive-parskip noarch 9:svn58358-59.fc37 fedora 17 k texlive-pdfcolmk noarch 9:svn52912-59.fc37 fedora 19 k texlive-pdfescape noarch 9:svn53082-59.fc37 fedora 353 k texlive-pdflscape noarch 9:svn53047-59.fc37 fedora 308 k texlive-pdfmanagement-testphase noarch 9:svn59194-59.fc37 fedora 6.4 M texlive-pdfpages noarch 9:svn58212-59.fc37 fedora 32 k texlive-pdftex x86_64 9:20210325-49.fc37 fedora 2.0 M texlive-pdftexcmds noarch 9:svn55777-59.fc37 fedora 391 k texlive-pgf noarch 9:svn57240-59.fc37 fedora 902 k texlive-picture noarch 9:svn54867-59.fc37 fedora 313 k texlive-placeins noarch 9:svn19848.2.2-59.fc37 fedora 14 k texlive-plain noarch 9:svn57963-59.fc37 fedora 48 k texlive-polyglossia noarch 9:svn58869-59.fc37 fedora 212 k texlive-psfrag noarch 9:svn15878.3.04-59.fc37 fedora 16 k texlive-pslatex noarch 9:svn57434-59.fc37 fedora 23 k texlive-psnfss noarch 9:svn54694-59.fc37 fedora 60 k texlive-pspicture noarch 9:svn15878.0-59.fc37 fedora 16 k texlive-pst-3d noarch 9:svn17257.1.10-59.fc37 fedora 18 k texlive-pst-coil noarch 9:svn37377.1.07-59.fc37 fedora 19 k texlive-pst-eps noarch 9:svn15878.1.0-59.fc37 fedora 18 k texlive-pst-fill noarch 9:svn15878.1.01-59.fc37 fedora 18 k texlive-pst-grad noarch 9:svn15878.1.06-59.fc37 fedora 19 k texlive-pst-math noarch 9:svn49425-59.fc37 fedora 20 k texlive-pst-node noarch 9:svn54687-59.fc37 fedora 41 k texlive-pst-ovl noarch 9:svn54963-59.fc37 fedora 17 k texlive-pst-plot noarch 9:svn54080-59.fc37 fedora 37 k texlive-pst-text noarch 9:svn49542-59.fc37 fedora 19 k texlive-pst-tools noarch 9:svn54518-59.fc37 fedora 21 k texlive-pst-tree noarch 9:svn43272-59.fc37 fedora 21 k texlive-pstricks noarch 9:svn58371-59.fc37 fedora 104 k texlive-pstricks-add noarch 9:svn53763-59.fc37 fedora 36 k texlive-pxfonts noarch 9:svn15878.0-59.fc37 fedora 524 k texlive-qstest noarch 9:svn15878.0-59.fc37 fedora 20 k texlive-ragged2e noarch 9:svn57638-59.fc37 fedora 664 k texlive-rcs noarch 9:svn15878.0-59.fc37 fedora 28 k texlive-realscripts noarch 9:svn56594-59.fc37 fedora 19 k texlive-refcount noarch 9:svn53164-59.fc37 fedora 335 k texlive-rerunfilecheck noarch 9:svn54841-59.fc37 fedora 324 k texlive-rsfs noarch 9:svn15878.0-59.fc37 fedora 74 k texlive-sansmath noarch 9:svn17997.1.1-59.fc37 fedora 15 k texlive-sansmathaccent noarch 9:svn53628-59.fc37 fedora 37 k texlive-sauerj noarch 9:svn15878.0-59.fc37 fedora 20 k texlive-section noarch 9:svn20180.0-59.fc37 fedora 24 k texlive-seminar noarch 9:svn34011.1.62-59.fc37 fedora 48 k texlive-sepnum noarch 9:svn20186.2.0-59.fc37 fedora 17 k texlive-setspace noarch 9:svn24881.6.7a-59.fc37 fedora 19 k texlive-showexpl noarch 9:svn57414-59.fc37 fedora 18 k texlive-soul noarch 9:svn56495-59.fc37 fedora 20 k texlive-stringenc noarch 9:svn52982-59.fc37 fedora 703 k texlive-subfig noarch 9:svn15878.1.3-59.fc37 fedora 22 k texlive-symbol noarch 9:svn31835.0-59.fc37 fedora 55 k texlive-tex x86_64 9:20210325-49.fc37 fedora 210 k texlive-tex-gyre noarch 9:svn48058-59.fc37 fedora 8.0 M texlive-tex-gyre-math noarch 9:svn41264-59.fc37 fedora 1.4 M texlive-tex-ini-files noarch 9:svn40533-59.fc37 fedora 16 k texlive-texlive-common-doc noarch 9:svn54176-59.fc37 fedora 106 k texlive-texlive-en noarch 9:20210325-49.fc37 fedora 1.9 M texlive-texlive-msg-translations noarch 9:svn59096-59.fc37 fedora 162 k texlive-texlive-scripts noarch 9:20210325-49.fc37 fedora 115 k texlive-texlive-scripts-extra noarch 9:20210325-49.fc37 fedora 61 k texlive-texlive.infra noarch 9:20210325-49.fc37 fedora 288 k texlive-textcase noarch 9:svn52092-59.fc37 fedora 16 k texlive-thumbpdf noarch 9:20210325-49.fc37 fedora 40 k texlive-times noarch 9:svn35058.0-59.fc37 fedora 370 k texlive-tipa noarch 9:svn29349.1.3-59.fc37 fedora 2.8 M texlive-titlesec noarch 9:svn52413-59.fc37 fedora 34 k texlive-tools noarch 9:svn56514-59.fc37 fedora 73 k texlive-translator noarch 9:svn56052-59.fc37 fedora 289 k texlive-transparent noarch 9:svn52981-59.fc37 fedora 277 k texlive-txfonts noarch 9:svn15878.0-59.fc37 fedora 816 k texlive-typehtml noarch 9:svn17134.0-59.fc37 fedora 21 k texlive-ucharcat noarch 9:svn38907-59.fc37 fedora 16 k texlive-ucs noarch 9:svn35853.2.2-59.fc37 fedora 383 k texlive-underscore noarch 9:svn18261.0-59.fc37 fedora 19 k texlive-unicode-data noarch 9:svn56768-59.fc37 fedora 360 k texlive-unicode-math noarch 9:svn56594-59.fc37 fedora 64 k texlive-uniquecounter noarch 9:svn53162-59.fc37 fedora 301 k texlive-url noarch 9:svn32528.3.4-59.fc37 fedora 20 k texlive-utopia noarch 9:svn15878.0-59.fc37 fedora 240 k texlive-varwidth noarch 9:svn24104.0.92-59.fc37 fedora 18 k texlive-wasy noarch 9:svn53533-59.fc37 fedora 44 k texlive-wasy-type1 noarch 9:svn53534-59.fc37 fedora 272 k texlive-wasysym noarch 9:svn54080-59.fc37 fedora 18 k texlive-xcolor noarch 9:svn41044-59.fc37 fedora 33 k texlive-xdvi x86_64 9:20210325-49.fc37 fedora 354 k texlive-xetex x86_64 9:20210325-49.fc37 fedora 1.2 M texlive-xetexconfig noarch 9:svn45845-59.fc37 fedora 12 k texlive-xifthen noarch 9:svn38929-59.fc37 fedora 17 k texlive-xkeyval noarch 9:svn57006-59.fc37 fedora 27 k texlive-xltxtra noarch 9:svn56594-59.fc37 fedora 17 k texlive-xpatch noarch 9:svn54563-59.fc37 fedora 19 k texlive-xstring noarch 9:svn49946-59.fc37 fedora 26 k texlive-xunicode noarch 9:svn30466.0.981-59.fc37 fedora 45 k texlive-zapfchan noarch 9:svn31835.0-59.fc37 fedora 110 k texlive-zapfding noarch 9:svn31835.0-59.fc37 fedora 65 k texlive-zref noarch 9:svn56611-59.fc37 fedora 671 k tk x86_64 1:8.6.12-3.fc37 copr_base 1.6 M tre x86_64 0.8.0-37.20140228gitc2f5d13.fc37 fedora 42 k tre-common noarch 0.8.0-37.20140228gitc2f5d13.fc37 fedora 31 k tzdata-java noarch 2022a-4.fc37 fedora 218 k urw-base35-bookman-fonts noarch 20200910-15.fc37 fedora 848 k urw-base35-c059-fonts noarch 20200910-15.fc37 fedora 875 k urw-base35-d050000l-fonts noarch 20200910-15.fc37 fedora 76 k urw-base35-fonts noarch 20200910-15.fc37 fedora 11 k urw-base35-fonts-common noarch 20200910-15.fc37 fedora 21 k urw-base35-gothic-fonts noarch 20200910-15.fc37 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-15.fc37 fedora 796 k urw-base35-nimbus-roman-fonts noarch 20200910-15.fc37 fedora 857 k urw-base35-nimbus-sans-fonts noarch 20200910-15.fc37 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-15.fc37 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-15.fc37 fedora 42 k urw-base35-z003-fonts noarch 20200910-15.fc37 fedora 276 k valgrind x86_64 1:3.19.0-4.fc37 copr_base 4.8 M xml-common noarch 0.6.3-59.fc37 fedora 31 k xorg-x11-proto-devel noarch 2022.1-2.fc37 fedora 297 k zziplib x86_64 0.13.72-2.fc37 fedora 86 k Transaction Summary ================================================================================================= Install 714 Packages Total download size: 442 M Installed size: 1.3 G Downloading Packages: (1/714): emacs-filesystem-28.1-3.fc37.noarch.rp 114 kB/s | 10 kB 00:00 (2/714): automake-1.16.5-9.fc37.noarch.rpm 6.0 MB/s | 675 kB 00:00 (3/714): expat-2.4.8-2.fc37.x86_64.rpm 4.4 MB/s | 110 kB 00:00 (4/714): fontconfig-2.14.0-2.fc37.x86_64.rpm 9.6 MB/s | 276 kB 00:00 (5/714): fontconfig-devel-2.14.0-2.fc37.x86_64. 2.7 MB/s | 128 kB 00:00 (6/714): less-590-5.fc37.x86_64.rpm 7.8 MB/s | 161 kB 00:00 (7/714): gnutls-3.7.7-1.fc37.x86_64.rpm 15 MB/s | 1.1 MB 00:00 (8/714): libICE-1.0.10-9.fc37.x86_64.rpm 1.3 MB/s | 71 kB 00:00 (9/714): 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: libmpc-1.2.1-5.fc37.x86_64 138/714 Verifying : libpaper-1.1.28-5.fc37.x86_64 139/714 Verifying : libquadmath-12.1.1-3.fc37.1.x86_64 140/714 Verifying : libquadmath-devel-12.1.1-3.fc37.1.x86_64 141/714 Verifying : libselinux-devel-3.4-5.fc37.x86_64 142/714 Verifying : libsepol-devel-3.4-3.fc37.x86_64 143/714 Verifying : libstdc++-devel-12.1.1-3.fc37.1.x86_64 144/714 Verifying : libthai-0.1.29-3.fc37.x86_64 145/714 Verifying : libthai-devel-0.1.29-3.fc37.x86_64 146/714 Verifying : libwebp-1.2.4-1.fc37.x86_64 147/714 Verifying : libxcb-1.13.1-10.fc37.x86_64 148/714 Verifying : libxcb-devel-1.13.1-10.fc37.x86_64 149/714 Verifying : libxcrypt-devel-4.4.28-2.fc37.x86_64 150/714 Verifying : libxml2-devel-2.9.14-3.fc37.x86_64 151/714 Verifying : lua-posix-35.1-4.fc37.x86_64 152/714 Verifying : mailcap-2.1.53-4.fc37.noarch 153/714 Verifying : mpdecimal-2.5.1-4.fc37.x86_64 154/714 Verifying : ncurses-6.3-3.20220501.fc37.x86_64 155/714 Verifying : ncurses-c++-libs-6.3-3.20220501.fc37.x86_64 156/714 Verifying : ncurses-devel-6.3-3.20220501.fc37.x86_64 157/714 Verifying : nspr-4.34.0-3.fc37.x86_64 158/714 Verifying : nss-3.81.0-1.fc37.x86_64 159/714 Verifying : nss-softokn-3.81.0-1.fc37.x86_64 160/714 Verifying : nss-softokn-freebl-3.81.0-1.fc37.x86_64 161/714 Verifying : nss-sysinit-3.81.0-1.fc37.x86_64 162/714 Verifying : nss-util-3.81.0-1.fc37.x86_64 163/714 Verifying : openblas-0.3.20-2.fc37.x86_64 164/714 Verifying : openblas-openmp-0.3.20-2.fc37.x86_64 165/714 Verifying : openblas-openmp64-0.3.20-2.fc37.x86_64 166/714 Verifying : openjpeg2-2.5.0-2.fc37.x86_64 167/714 Verifying : pango-1.50.8-3.fc37.x86_64 168/714 Verifying : pango-devel-1.50.8-3.fc37.x86_64 169/714 Verifying : perl-Authen-SASL-2.16-28.fc37.noarch 170/714 Verifying : perl-AutoLoader-5.74-491.fc37.noarch 171/714 Verifying : perl-B-1.83-491.fc37.x86_64 172/714 Verifying : perl-B-Hooks-EndOfScope-0.26-4.fc37.noarch 173/714 Verifying : perl-Business-ISBN-3.007-4.fc37.noarch 174/714 Verifying : perl-Business-ISBN-Data-20210112.006-6.fc37.noar 175/714 Verifying : perl-Business-ISMN-1.202-6.fc37.noarch 176/714 Verifying : perl-Business-ISSN-1.005-3.fc37.noarch 177/714 Verifying : perl-Carp-1.52-489.fc37.noarch 178/714 Verifying : perl-Class-Accessor-0.51-16.fc37.noarch 179/714 Verifying : perl-Class-Data-Inheritable-0.09-4.fc37.noarch 180/714 Verifying : perl-Class-Inspector-1.36-11.fc37.noarch 181/714 Verifying : perl-Class-Method-Modifiers-2.13-13.fc37.noarch 182/714 Verifying : perl-Class-Singleton-1.6-7.fc37.noarch 183/714 Verifying : perl-Class-Struct-0.66-491.fc37.noarch 184/714 Verifying : perl-Clone-0.45-9.fc37.x86_64 185/714 Verifying : perl-Compress-Raw-Bzip2-2.201-2.fc37.x86_64 186/714 Verifying : perl-Compress-Raw-Zlib-2.202-3.fc37.x86_64 187/714 Verifying : perl-Convert-ASN1-0.33-4.fc37.noarch 188/714 Verifying : perl-Data-Compare-1.27-10.fc37.noarch 189/714 Verifying : perl-Data-Dump-1.25-5.fc37.noarch 190/714 Verifying : perl-Data-Dumper-2.184-490.fc37.x86_64 191/714 Verifying : perl-Data-OptList-0.112-5.fc37.noarch 192/714 Verifying : perl-Data-Uniqid-0.12-29.fc37.noarch 193/714 Verifying : perl-Date-ISO8601-0.005-16.fc37.noarch 194/714 Verifying : perl-Date-Manip-6.88-3.fc37.noarch 195/714 Verifying : perl-DateTime-2:1.58-4.fc37.x86_64 196/714 Verifying : perl-DateTime-Calendar-Julian-0.107-3.fc37.noarc 197/714 Verifying : perl-DateTime-Format-Builder-0.8300-8.fc37.noarc 198/714 Verifying : perl-DateTime-Format-Strptime-1:1.79-6.fc37.noar 199/714 Verifying : perl-DateTime-Locale-1.35-3.fc37.noarch 200/714 Verifying : perl-DateTime-TimeZone-2.52-4.fc37.noarch 201/714 Verifying : perl-DateTime-TimeZone-SystemV-0.010-17.fc37.noa 202/714 Verifying : perl-DateTime-TimeZone-Tzfile-0.011-17.fc37.noar 203/714 Verifying : perl-Devel-CallChecker-0.008-17.fc37.x86_64 204/714 Verifying : perl-Devel-Caller-2.06-29.fc37.x86_64 205/714 Verifying : perl-Devel-GlobalDestruction-0.14-19.fc37.noarch 206/714 Verifying : perl-Devel-LexAlias-0.05-30.fc37.x86_64 207/714 Verifying : perl-Devel-StackTrace-1:2.04-13.fc37.noarch 208/714 Verifying : perl-Digest-1.20-489.fc37.noarch 209/714 Verifying : perl-Digest-HMAC-1.04-6.fc37.noarch 210/714 Verifying : perl-Digest-MD5-2.58-489.fc37.x86_64 211/714 Verifying : perl-Digest-SHA-1:6.02-490.fc37.x86_64 212/714 Verifying : perl-Dist-CheckConflicts-0.11-26.fc37.noarch 213/714 Verifying : perl-DynaLoader-1.52-491.fc37.x86_64 214/714 Verifying : perl-DynaLoader-Functions-0.003-16.fc37.noarch 215/714 Verifying : perl-Email-Date-Format-1.005-23.fc37.noarch 216/714 Verifying : perl-Encode-4:3.19-491.fc37.x86_64 217/714 Verifying : perl-Encode-Locale-1.05-24.fc37.noarch 218/714 Verifying : perl-English-1.11-491.fc37.noarch 219/714 Verifying : perl-Errno-1.36-491.fc37.x86_64 220/714 Verifying : perl-Eval-Closure-0.14-19.fc37.noarch 221/714 Verifying : perl-Exception-Class-1.45-6.fc37.noarch 222/714 Verifying : perl-Exporter-5.77-489.fc37.noarch 223/714 Verifying : perl-ExtUtils-MM-Utils-2:7.64-490.fc37.noarch 224/714 Verifying : perl-Fcntl-1.15-491.fc37.x86_64 225/714 Verifying : perl-File-Basename-2.85-491.fc37.noarch 226/714 Verifying : perl-File-Compare-1.100.700-491.fc37.noarch 227/714 Verifying : perl-File-Copy-2.39-491.fc37.noarch 228/714 Verifying : perl-File-Find-1.40-491.fc37.noarch 229/714 Verifying : perl-File-Find-Rule-0.34-22.fc37.noarch 230/714 Verifying : perl-File-Listing-6.15-3.fc37.noarch 231/714 Verifying : perl-File-Path-2.18-489.fc37.noarch 232/714 Verifying : perl-File-ShareDir-1.118-7.fc37.noarch 233/714 Verifying : perl-File-Slurper-0.013-4.fc37.noarch 234/714 Verifying : perl-File-Temp-1:0.231.100-489.fc37.noarch 235/714 Verifying : perl-File-stat-1.12-491.fc37.noarch 236/714 Verifying : perl-FileHandle-2.03-491.fc37.noarch 237/714 Verifying : perl-Filter-2:1.61-2.fc37.x86_64 238/714 Verifying : perl-FindBin-1.53-491.fc37.noarch 239/714 Verifying : perl-GSSAPI-0.28-40.fc37.x86_64 240/714 Verifying : perl-Getopt-Long-1:2.52-489.fc37.noarch 241/714 Verifying : perl-Getopt-Std-1.13-491.fc37.noarch 242/714 Verifying : perl-HTML-Parser-3.78-3.fc37.x86_64 243/714 Verifying : perl-HTML-Tagset-3.20-52.fc37.noarch 244/714 Verifying : perl-HTTP-Cookies-6.10-7.fc37.noarch 245/714 Verifying : perl-HTTP-Date-6.05-10.fc37.noarch 246/714 Verifying : perl-HTTP-Message-6.36-4.fc37.noarch 247/714 Verifying : perl-HTTP-Negotiate-6.01-33.fc37.noarch 248/714 Verifying : perl-HTTP-Tiny-0.082-1.fc37.noarch 249/714 Verifying : perl-Hash-Util-FieldHash-1.26-491.fc37.x86_64 250/714 Verifying : perl-I18N-LangTags-0.45-491.fc37.noarch 251/714 Verifying : perl-I18N-Langinfo-0.21-491.fc37.x86_64 252/714 Verifying : perl-IO-1.50-491.fc37.x86_64 253/714 Verifying : perl-IO-Compress-2.201-3.fc37.noarch 254/714 Verifying : perl-IO-HTML-1.004-7.fc37.noarch 255/714 Verifying : perl-IO-Socket-IP-0.41-490.fc37.noarch 256/714 Verifying : perl-IO-Socket-SSL-2.074-4.fc37.noarch 257/714 Verifying : perl-IO-String-1.08-46.fc37.noarch 258/714 Verifying : perl-IPC-Cmd-2:1.04-490.fc37.noarch 259/714 Verifying : perl-IPC-Open3-1.22-491.fc37.noarch 260/714 Verifying : perl-IPC-Run3-0.048-26.fc37.noarch 261/714 Verifying : perl-IPC-SysV-2.09-490.fc37.x86_64 262/714 Verifying : perl-IPC-System-Simple-1.30-9.fc37.noarch 263/714 Verifying : perl-JSON-4.09-1.fc37.noarch 264/714 Verifying : perl-LDAP-1:0.68-8.fc37.noarch 265/714 Verifying : perl-LWP-MediaTypes-6.04-12.fc37.noarch 266/714 Verifying : perl-LWP-Protocol-https-6.10-7.fc37.noarch 267/714 Verifying : perl-Lingua-Translit-0.29-2.fc37.noarch 268/714 Verifying : perl-List-AllUtils-0.19-7.fc37.noarch 269/714 Verifying : perl-List-SomeUtils-0.58-10.fc37.noarch 270/714 Verifying : perl-List-UtilsBy-0.12-3.fc37.noarch 271/714 Verifying : perl-Locale-Maketext-1.31-490.fc37.noarch 272/714 Verifying : perl-Locale-Maketext-Simple-1:0.21-491.fc37.noar 273/714 Verifying : perl-Log-Dispatch-2.70-8.fc37.noarch 274/714 Verifying : perl-Log-Dispatch-FileRotate-1.38-5.fc37.noarch 275/714 Verifying : perl-Log-Log4perl-1.55-2.fc37.noarch 276/714 Verifying : perl-MIME-Base64-3.16-489.fc37.x86_64 277/714 Verifying : perl-MIME-Charset-1.012.2-18.fc37.noarch 278/714 Verifying : perl-MIME-Lite-3.033-5.fc37.noarch 279/714 Verifying : perl-MIME-Types-2.22-4.fc37.noarch 280/714 Verifying : perl-MRO-Compat-0.15-4.fc37.noarch 281/714 Verifying : perl-Mail-Sender-1:0.903-19.fc37.noarch 282/714 Verifying : perl-Mail-Sendmail-0.80-16.fc37.noarch 283/714 Verifying : perl-MailTools-2.21-12.fc37.noarch 284/714 Verifying : perl-Math-BigInt-1:1.9998.37-2.fc37.noarch 285/714 Verifying : perl-Math-BigRat-0.2624-2.fc37.noarch 286/714 Verifying : perl-Math-Complex-1.59-491.fc37.noarch 287/714 Verifying : perl-Module-CoreList-1:5.20220720-1.fc37.noarch 288/714 Verifying : perl-Module-Implementation-0.09-35.fc37.noarch 289/714 Verifying : perl-Module-Load-1:0.36-489.fc37.noarch 290/714 Verifying : perl-Module-Load-Conditional-0.74-489.fc37.noarc 291/714 Verifying : perl-Module-Metadata-1.000037-489.fc37.noarch 292/714 Verifying : perl-Module-Runtime-0.016-16.fc37.noarch 293/714 Verifying : perl-Mozilla-CA-20211001-4.fc37.noarch 294/714 Verifying : perl-NTLM-1.09-33.fc37.noarch 295/714 Verifying : perl-Net-HTTP-6.22-3.fc37.noarch 296/714 Verifying : perl-Net-SMTP-SSL-1.04-19.fc37.noarch 297/714 Verifying : perl-Net-SSLeay-1.92-4.fc37.x86_64 298/714 Verifying : perl-Number-Compare-0.03-33.fc37.noarch 299/714 Verifying : perl-Opcode-1.57-491.fc37.x86_64 300/714 Verifying : perl-POSIX-2.03-491.fc37.x86_64 301/714 Verifying : perl-Package-Generator-1.106-26.fc37.noarch 302/714 Verifying : perl-Package-Stash-0.40-3.fc37.noarch 303/714 Verifying : perl-Package-Stash-XS-0.30-2.fc37.x86_64 304/714 Verifying : perl-PadWalker-2.5-7.fc37.x86_64 305/714 Verifying : perl-Params-Check-1:0.38-489.fc37.noarch 306/714 Verifying : perl-Params-Classify-0.015-17.fc37.x86_64 307/714 Verifying : perl-Params-Util-1.102-8.fc37.x86_64 308/714 Verifying : perl-Params-Validate-1.30-7.fc37.x86_64 309/714 Verifying : perl-Params-ValidationCompiler-0.30-17.fc37.noar 310/714 Verifying : perl-Parse-RecDescent-1.967015-18.fc37.noarch 311/714 Verifying : perl-PathTools-3.84-489.fc37.x86_64 312/714 Verifying : perl-Pod-Escapes-1:1.07-489.fc37.noarch 313/714 Verifying : perl-Pod-Html-1.33-491.fc37.noarch 314/714 Verifying : perl-Pod-Perldoc-3.28.01-490.fc37.noarch 315/714 Verifying : perl-Pod-Simple-1:3.43-490.fc37.noarch 316/714 Verifying : perl-Pod-Usage-4:2.03-3.fc37.noarch 317/714 Verifying : perl-Ref-Util-0.204-15.fc37.noarch 318/714 Verifying : perl-Ref-Util-XS-0.117-16.fc37.x86_64 319/714 Verifying : perl-Regexp-Common-2017060201-19.fc37.noarch 320/714 Verifying : perl-Role-Tiny-2.002004-7.fc37.noarch 321/714 Verifying : perl-Safe-2.43-491.fc37.noarch 322/714 Verifying : perl-Scalar-List-Utils-5:1.62-489.fc37.x86_64 323/714 Verifying : perl-SelectSaver-1.02-491.fc37.noarch 324/714 Verifying : perl-Socket-4:2.035-2.fc37.x86_64 325/714 Verifying : perl-Sort-Key-1.33-25.fc37.x86_64 326/714 Verifying : perl-Specio-0.48-2.fc37.noarch 327/714 Verifying : perl-Storable-1:3.26-489.fc37.x86_64 328/714 Verifying : perl-Sub-Exporter-0.988-5.fc37.noarch 329/714 Verifying : perl-Sub-Exporter-Progressive-0.001013-19.fc37.n 330/714 Verifying : perl-Sub-Identify-0.14-20.fc37.x86_64 331/714 Verifying : perl-Sub-Install-0.928-33.fc37.noarch 332/714 Verifying : perl-Symbol-1.09-491.fc37.noarch 333/714 Verifying : perl-Sys-Hostname-1.24-491.fc37.x86_64 334/714 Verifying : perl-Sys-Syslog-0.36-490.fc37.x86_64 335/714 Verifying : perl-Term-ANSIColor-5.01-490.fc37.noarch 336/714 Verifying : perl-Term-Cap-1.17-489.fc37.noarch 337/714 Verifying : perl-Text-Balanced-2.06-2.fc37.noarch 338/714 Verifying : perl-Text-BibTeX-0.88-12.fc37.x86_64 339/714 Verifying : perl-Text-CSV-2.01-5.fc37.noarch 340/714 Verifying : perl-Text-Glob-0.11-18.fc37.noarch 341/714 Verifying : perl-Text-ParseWords-3.31-489.fc37.noarch 342/714 Verifying : perl-Text-Roman-3.5-23.fc37.noarch 343/714 Verifying : perl-Text-Soundex-3.05-23.fc37.x86_64 344/714 Verifying : perl-Text-Tabs+Wrap-2021.0814-489.fc37.noarch 345/714 Verifying : perl-Text-Unidecode-1.30-19.fc37.noarch 346/714 Verifying : perl-Thread-Queue-3.14-489.fc37.noarch 347/714 Verifying : perl-Tie-4.6-491.fc37.noarch 348/714 Verifying : perl-Tie-Cycle-1.227-4.fc37.noarch 349/714 Verifying : perl-Tie-RefHash-1.40-489.fc37.noarch 350/714 Verifying : perl-Time-HiRes-4:1.9770-489.fc37.x86_64 351/714 Verifying : perl-Time-Local-2:1.300-489.fc37.noarch 352/714 Verifying : perl-TimeDate-1:2.33-9.fc37.noarch 353/714 Verifying : perl-Try-Tiny-0.31-4.fc37.noarch 354/714 Verifying : perl-URI-5.12-2.fc37.noarch 355/714 Verifying : perl-Unicode-Collate-1.31-489.fc37.x86_64 356/714 Verifying : perl-Unicode-EastAsianWidth-12.0-9.fc37.noarch 357/714 Verifying : perl-Unicode-LineBreak-2019.001-14.fc37.x86_64 358/714 Verifying : perl-Unicode-Normalize-1.31-489.fc37.x86_64 359/714 Verifying : perl-Unicode-UCD-0.78-491.fc37.noarch 360/714 Verifying : perl-Variable-Magic-0.62-17.fc37.x86_64 361/714 Verifying : perl-WWW-RobotRules-6.02-33.fc37.noarch 362/714 Verifying : perl-XML-LibXML-1:2.0207-7.fc37.x86_64 363/714 Verifying : perl-XML-LibXML-Simple-1.01-10.fc37.noarch 364/714 Verifying : perl-XML-LibXSLT-2.002.000-3.fc37.x86_64 365/714 Verifying : perl-XML-NamespaceSupport-1.12-18.fc37.noarch 366/714 Verifying : perl-XML-Parser-2.46-12.fc37.x86_64 367/714 Verifying : perl-XML-SAX-1.02-11.fc37.noarch 368/714 Verifying : perl-XML-SAX-Base-1.09-18.fc37.noarch 369/714 Verifying : perl-XML-Writer-0.900-8.fc37.noarch 370/714 Verifying : perl-XML-XPath-1.47-3.fc37.noarch 371/714 Verifying : perl-XString-0.005-7.fc37.x86_64 372/714 Verifying : perl-autodie-2.34-490.fc37.noarch 373/714 Verifying : perl-autovivification-0.18-17.fc37.x86_64 374/714 Verifying : perl-base-2.27-491.fc37.noarch 375/714 Verifying : perl-constant-1.33-490.fc37.noarch 376/714 Verifying : perl-deprecate-0.04-491.fc37.noarch 377/714 Verifying : perl-encoding-4:3.00-491.fc37.x86_64 378/714 Verifying : perl-if-0.61.000-491.fc37.noarch 379/714 Verifying : perl-interpreter-4:5.36.0-491.fc37.x86_64 380/714 Verifying : perl-lib-0.65-491.fc37.x86_64 381/714 Verifying : perl-libintl-perl-1.32-7.fc37.x86_64 382/714 Verifying : perl-libnet-3.14-490.fc37.noarch 383/714 Verifying : perl-libs-4:5.36.0-491.fc37.x86_64 384/714 Verifying : perl-libwww-perl-6.67-2.fc37.noarch 385/714 Verifying : perl-locale-1.10-491.fc37.noarch 386/714 Verifying : perl-meta-notation-5.36.0-491.fc37.noarch 387/714 Verifying : perl-mro-1.26-491.fc37.x86_64 388/714 Verifying : perl-namespace-autoclean-0.29-13.fc37.noarch 389/714 Verifying : perl-namespace-clean-0.27-21.fc37.noarch 390/714 Verifying : perl-open-1.13-491.fc37.noarch 391/714 Verifying : perl-overload-1.35-491.fc37.noarch 392/714 Verifying : perl-overloading-0.02-491.fc37.noarch 393/714 Verifying : perl-parent-1:0.238-489.fc37.noarch 394/714 Verifying : perl-podlators-1:4.14-489.fc37.noarch 395/714 Verifying : perl-sigtrap-1.10-491.fc37.noarch 396/714 Verifying : perl-subs-1.04-491.fc37.noarch 397/714 Verifying : perl-threads-1:2.27-489.fc37.x86_64 398/714 Verifying : perl-threads-shared-1.64-489.fc37.x86_64 399/714 Verifying : perl-vars-1.05-491.fc37.noarch 400/714 Verifying : perl-version-8:0.99.29-490.fc37.x86_64 401/714 Verifying : perltidy-20220613-2.fc37.noarch 402/714 Verifying : pixman-0.40.0-6.fc37.x86_64 403/714 Verifying : pixman-devel-0.40.0-6.fc37.x86_64 404/714 Verifying : poppler-22.01.0-6.fc37.x86_64 405/714 Verifying : poppler-data-0.4.11-3.fc37.noarch 406/714 Verifying : python-pip-wheel-22.2-1.fc37.noarch 407/714 Verifying : python-setuptools-wheel-62.6.0-2.fc37.noarch 408/714 Verifying : readline-devel-8.1-7.fc37.x86_64 409/714 Verifying : sysprof-capture-devel-3.44.0-2.fc37.x86_64 410/714 Verifying : texinfo-6.8-4.fc37.x86_64 411/714 Verifying : texinfo-tex-6.8-4.fc37.x86_64 412/714 Verifying : texlive-ae-9:svn15878.1.4-59.fc37.noarch 413/714 Verifying : texlive-algorithms-9:svn42428-59.fc37.noarch 414/714 Verifying : texlive-alphalph-9:svn53087-59.fc37.noarch 415/714 Verifying : texlive-amscls-9:svn55378-59.fc37.noarch 416/714 Verifying : texlive-amsfonts-9:svn29208.3.04-59.fc37.noarch 417/714 Verifying : texlive-amsmath-9:svn56514-59.fc37.noarch 418/714 Verifying : texlive-anysize-9:svn15878.0-59.fc37.noarch 419/714 Verifying : texlive-atbegshi-9:svn53051-59.fc37.noarch 420/714 Verifying : texlive-attachfile-9:svn42099-59.fc37.noarch 421/714 Verifying : texlive-attachfile2-9:20210325-49.fc37.noarch 422/714 Verifying : texlive-atveryend-9:svn53108-59.fc37.noarch 423/714 Verifying : texlive-auto-pst-pdf-9:svn56596-59.fc37.noarch 424/714 Verifying : texlive-auxhook-9:svn53173-59.fc37.noarch 425/714 Verifying : texlive-avantgar-9:svn31835.0-59.fc37.noarch 426/714 Verifying : texlive-babel-english-9:svn44495-59.fc37.noarch 427/714 Verifying : texlive-babel-9:svn58999-59.fc37.noarch 428/714 Verifying : texlive-babelbib-9:svn57349-59.fc37.noarch 429/714 Verifying : texlive-base-9:20210325-49.fc37.x86_64 430/714 Verifying : texlive-beamer-9:svn58537-59.fc37.noarch 431/714 Verifying : texlive-bera-9:svn20031.0-59.fc37.noarch 432/714 Verifying : texlive-beton-9:svn15878.0-59.fc37.noarch 433/714 Verifying : texlive-biblatex-9:svn61868-59.fc37.noarch 434/714 Verifying : texlive-bibtex-9:20210325-49.fc37.x86_64 435/714 Verifying : texlive-bidi-9:svn55193-59.fc37.noarch 436/714 Verifying : texlive-bigintcalc-9:svn53172-59.fc37.noarch 437/714 Verifying : texlive-bitset-9:svn53837-59.fc37.noarch 438/714 Verifying : texlive-bookman-9:svn31835.0-59.fc37.noarch 439/714 Verifying : texlive-bookmark-9:svn56885-59.fc37.noarch 440/714 Verifying : texlive-booktabs-9:svn53402-59.fc37.noarch 441/714 Verifying : texlive-breakurl-9:svn29901.1.40-59.fc37.noarch 442/714 Verifying : texlive-breqn-9:svn56422-59.fc37.noarch 443/714 Verifying : texlive-caption-9:svn56771-59.fc37.noarch 444/714 Verifying : texlive-carlisle-9:svn56753-59.fc37.noarch 445/714 Verifying : texlive-catchfile-9:svn53084-59.fc37.noarch 446/714 Verifying : texlive-changepage-9:svn15878.1.0c-59.fc37.noarc 447/714 Verifying : texlive-charter-9:svn15878.0-59.fc37.noarch 448/714 Verifying : texlive-cite-9:svn36428.5.5-59.fc37.noarch 449/714 Verifying : texlive-cm-super-9:svn15878.0-59.fc37.noarch 450/714 Verifying : texlive-cm-9:svn57963-59.fc37.noarch 451/714 Verifying : texlive-cmap-9:svn57640-59.fc37.noarch 452/714 Verifying : texlive-cmextra-9:svn57866-59.fc37.noarch 453/714 Verifying : texlive-collection-basic-9:svn59159-59.fc37.noar 454/714 Verifying : texlive-collection-fontsrecommended-9:svn54074-5 455/714 Verifying : texlive-collection-latex-9:svn57048-59.fc37.noar 456/714 Verifying : texlive-collection-latexrecommended-9:svn57862-5 457/714 Verifying : texlive-colorprofiles-9:svn49086-59.fc37.noarch 458/714 Verifying : texlive-colortbl-9:svn53545-59.fc37.noarch 459/714 Verifying : texlive-courier-9:svn35058.0-59.fc37.noarch 460/714 Verifying : texlive-crop-9:svn55424-59.fc37.noarch 461/714 Verifying : texlive-csquotes-9:svn57844-59.fc37.noarch 462/714 Verifying : texlive-ctable-9:svn38672-59.fc37.noarch 463/714 Verifying : texlive-ctablestack-9:svn38514-59.fc37.noarch 464/714 Verifying : texlive-currfile-9:svn56478-59.fc37.noarch 465/714 Verifying : texlive-dehyph-9:svn48599-59.fc37.noarch 466/714 Verifying : texlive-dvipdfmx-9:20210325-49.fc37.x86_64 467/714 Verifying : texlive-dvips-9:20210325-49.fc37.x86_64 468/714 Verifying : texlive-ec-9:svn25033.1.0-59.fc37.noarch 469/714 Verifying : texlive-enctex-9:svn34957.0-59.fc37.noarch 470/714 Verifying : texlive-enumitem-9:svn51423-59.fc37.noarch 471/714 Verifying : texlive-epsf-9:svn21461.2.7.4-59.fc37.noarch 472/714 Verifying : texlive-epstopdf-9:20210325-49.fc37.noarch 473/714 Verifying : texlive-epstopdf-pkg-9:svn53546-59.fc37.noarch 474/714 Verifying : texlive-eso-pic-9:svn56658-59.fc37.noarch 475/714 Verifying : texlive-etex-pkg-9:svn41784-59.fc37.noarch 476/714 Verifying : texlive-etex-9:svn56291-59.fc37.noarch 477/714 Verifying : texlive-etexcmds-9:svn53171-59.fc37.noarch 478/714 Verifying : texlive-etoolbox-9:svn56554-59.fc37.noarch 479/714 Verifying : texlive-euenc-9:svn19795.0.1h-59.fc37.noarch 480/714 Verifying : texlive-euler-9:svn42428-59.fc37.noarch 481/714 Verifying : texlive-euro-ce-9:svn25714-59.fc37.noarch 482/714 Verifying : texlive-euro-9:svn22191.1.1-59.fc37.noarch 483/714 Verifying : texlive-eurosym-9:svn17265.1.4_subrfix-59.fc37.n 484/714 Verifying : texlive-everysel-9:svn57489-59.fc37.noarch 485/714 Verifying : texlive-everyshi-9:svn57001-59.fc37.noarch 486/714 Verifying : texlive-extsizes-9:svn17263.1.4a-59.fc37.noarch 487/714 Verifying : texlive-fancybox-9:svn18304.1.4-59.fc37.noarch 488/714 Verifying : texlive-fancyhdr-9:svn57672-59.fc37.noarch 489/714 Verifying : texlive-fancyref-9:svn15878.0.9c-59.fc37.noarch 490/714 Verifying : texlive-fancyvrb-9:svn57488-59.fc37.noarch 491/714 Verifying : texlive-filecontents-9:svn52142-59.fc37.noarch 492/714 Verifying : texlive-filehook-9:svn56479-59.fc37.noarch 493/714 Verifying : texlive-finstrut-9:svn21719.0.5-59.fc37.noarch 494/714 Verifying : texlive-firstaid-9:svn58440-59.fc37.noarch 495/714 Verifying : texlive-fix2col-9:svn38770-59.fc37.noarch 496/714 Verifying : texlive-float-9:svn15878.1.3d-59.fc37.noarch 497/714 Verifying : texlive-fontspec-9:svn56594-59.fc37.noarch 498/714 Verifying : texlive-footmisc-9:svn23330.5.5b-59.fc37.noarch 499/714 Verifying : texlive-footnotehyper-9:svn57618-59.fc37.noarch 500/714 Verifying : texlive-fp-9:svn49719-59.fc37.noarch 501/714 Verifying : texlive-fpl-9:svn54512-59.fc37.noarch 502/714 Verifying : texlive-geometry-9:svn54080-59.fc37.noarch 503/714 Verifying : texlive-gettitlestring-9:svn53170-59.fc37.noarch 504/714 Verifying : texlive-glyphlist-9:20210325-49.fc37.noarch 505/714 Verifying : texlive-graphics-cfg-9:svn41448-59.fc37.noarch 506/714 Verifying : texlive-graphics-def-9:svn58539-59.fc37.noarch 507/714 Verifying : texlive-graphics-9:svn56514-59.fc37.noarch 508/714 Verifying : texlive-grfext-9:svn53024-59.fc37.noarch 509/714 Verifying : texlive-grffile-9:svn52756-59.fc37.noarch 510/714 Verifying : texlive-gsftopk-9:20210325-49.fc37.x86_64 511/714 Verifying : texlive-helvetic-9:svn31835.0-59.fc37.noarch 512/714 Verifying : texlive-hobsub-9:svn52810-59.fc37.noarch 513/714 Verifying : texlive-hologo-9:svn53048-59.fc37.noarch 514/714 Verifying : texlive-hopatch-9:svn56106-59.fc37.noarch 515/714 Verifying : texlive-hycolor-9:svn53584-59.fc37.noarch 516/714 Verifying : texlive-hyperref-9:svn58024-59.fc37.noarch 517/714 Verifying : texlive-hyph-utf8-9:svn58619-59.fc37.noarch 518/714 Verifying : texlive-hyphen-base-9:svn58630-59.fc37.noarch 519/714 Verifying : texlive-hyphenex-9:svn57387-59.fc37.noarch 520/714 Verifying : texlive-ifmtarg-9:svn47544-59.fc37.noarch 521/714 Verifying : texlive-ifplatform-9:svn45533-59.fc37.noarch 522/714 Verifying : texlive-iftex-9:svn56594-59.fc37.noarch 523/714 Verifying : texlive-inconsolata-9:svn54512-59.fc37.noarch 524/714 Verifying : texlive-index-9:svn24099.4.1beta-59.fc37.noarch 525/714 Verifying : texlive-infwarerr-9:svn53023-59.fc37.noarch 526/714 Verifying : texlive-intcalc-9:svn53168-59.fc37.noarch 527/714 Verifying : texlive-jknapltx-9:svn19440.0-59.fc37.noarch 528/714 Verifying : texlive-kastrup-9:svn15878.0-59.fc37.noarch 529/714 Verifying : texlive-knuth-lib-9:svn57963-59.fc37.noarch 530/714 Verifying : texlive-knuth-local-9:svn57963-59.fc37.noarch 531/714 Verifying : texlive-koma-script-9:svn58585-59.fc37.noarch 532/714 Verifying : texlive-kpathsea-9:20210325-49.fc37.x86_64 533/714 Verifying : texlive-kvdefinekeys-9:svn53193-59.fc37.noarch 534/714 Verifying : texlive-kvoptions-9:svn56609-59.fc37.noarch 535/714 Verifying : texlive-kvsetkeys-9:svn53166-59.fc37.noarch 536/714 Verifying : texlive-l3backend-9:svn59118-59.fc37.noarch 537/714 Verifying : texlive-l3experimental-9:svn57789-59.fc37.noarch 538/714 Verifying : texlive-l3kernel-9:svn59118-59.fc37.noarch 539/714 Verifying : texlive-l3packages-9:svn59118-59.fc37.noarch 540/714 Verifying : texlive-latex-9:20210325-49.fc37.noarch 541/714 Verifying : texlive-latex-fonts-9:svn28888.0-59.fc37.noarch 542/714 Verifying : texlive-latexbug-9:svn58151-59.fc37.noarch 543/714 Verifying : texlive-latexconfig-9:svn53525-59.fc37.noarch 544/714 Verifying : texlive-letltxmacro-9:svn53022-59.fc37.noarch 545/714 Verifying : texlive-lib-9:20210325-49.fc37.x86_64 546/714 Verifying : texlive-lineno-9:svn57866-59.fc37.noarch 547/714 Verifying : texlive-listings-9:svn55265-59.fc37.noarch 548/714 Verifying : texlive-lm-math-9:svn36915.1.959-59.fc37.noarch 549/714 Verifying : texlive-lm-9:svn58637-59.fc37.noarch 550/714 Verifying : texlive-logreq-9:svn53003-59.fc37.noarch 551/714 Verifying : texlive-ltabptch-9:svn17533.1.74d-59.fc37.noarch 552/714 Verifying : texlive-ltxcmds-9:svn56421-59.fc37.noarch 553/714 Verifying : texlive-ltxmisc-9:svn21927.0-59.fc37.noarch 554/714 Verifying : texlive-lua-alt-getopt-9:svn56414-59.fc37.noarch 555/714 Verifying : texlive-luabidi-9:svn54512-59.fc37.noarch 556/714 Verifying : texlive-luahbtex-9:20210325-49.fc37.x86_64 557/714 Verifying : texlive-lualatex-math-9:svn56541-59.fc37.noarch 558/714 Verifying : texlive-lualibs-9:svn57277-59.fc37.noarch 559/714 Verifying : texlive-luaotfload-9:20210325-49.fc37.noarch 560/714 Verifying : texlive-luatex-9:20210325-49.fc37.x86_64 561/714 Verifying : texlive-luatexbase-9:svn52663-59.fc37.noarch 562/714 Verifying : texlive-lwarp-9:20210325-49.fc37.noarch 563/714 Verifying : texlive-makecmds-9:svn15878.0-59.fc37.noarch 564/714 Verifying : texlive-makeindex-9:20210325-49.fc37.x86_64 565/714 Verifying : texlive-manfnt-font-9:svn54684-59.fc37.noarch 566/714 Verifying : texlive-marginnote-9:svn48383-59.fc37.noarch 567/714 Verifying : texlive-marvosym-9:svn29349.2.2a-59.fc37.noarch 568/714 Verifying : texlive-mathpazo-9:svn52663-59.fc37.noarch 569/714 Verifying : texlive-mathspec-9:svn42773-59.fc37.noarch 570/714 Verifying : texlive-mathtools-9:svn58856-59.fc37.noarch 571/714 Verifying : texlive-mdwtools-9:svn15878.1.05.4-59.fc37.noarc 572/714 Verifying : texlive-memoir-9:svn58666-59.fc37.noarch 573/714 Verifying : texlive-metafont-9:20210325-49.fc37.x86_64 574/714 Verifying : texlive-metalogo-9:svn18611.0.12-59.fc37.noarch 575/714 Verifying : texlive-mflogo-font-9:svn54512-59.fc37.noarch 576/714 Verifying : texlive-mflogo-9:svn42428-59.fc37.noarch 577/714 Verifying : texlive-mfnfss-9:svn46036-59.fc37.noarch 578/714 Verifying : texlive-mfware-9:20210325-49.fc37.x86_64 579/714 Verifying : texlive-microtype-9:svn58394-59.fc37.noarch 580/714 Verifying : texlive-minitoc-9:svn48196-59.fc37.noarch 581/714 Verifying : texlive-mnsymbol-9:svn18651.1.4-59.fc37.noarch 582/714 Verifying : texlive-modes-9:svn56303-59.fc37.noarch 583/714 Verifying : texlive-mparhack-9:svn59066-59.fc37.noarch 584/714 Verifying : texlive-mptopdf-9:20210325-49.fc37.noarch 585/714 Verifying : texlive-ms-9:svn57473-59.fc37.noarch 586/714 Verifying : texlive-multido-9:svn18302.1.42-59.fc37.noarch 587/714 Verifying : texlive-natbib-9:svn20668.8.31b-59.fc37.noarch 588/714 Verifying : texlive-ncntrsbk-9:svn31835.0-59.fc37.noarch 589/714 Verifying : texlive-newfloat-9:svn52906-59.fc37.noarch 590/714 Verifying : texlive-notoccite-9:svn18129.0-59.fc37.noarch 591/714 Verifying : texlive-ntgclass-9:svn56959-59.fc37.noarch 592/714 Verifying : texlive-oberdiek-9:20210325-49.fc37.noarch 593/714 Verifying : texlive-pagesel-9:svn56105-59.fc37.noarch 594/714 Verifying : texlive-palatino-9:svn31835.0-59.fc37.noarch 595/714 Verifying : texlive-paralist-9:svn43021-59.fc37.noarch 596/714 Verifying : texlive-parallel-9:svn15878.0-59.fc37.noarch 597/714 Verifying : texlive-parskip-9:svn58358-59.fc37.noarch 598/714 Verifying : texlive-pdfcolmk-9:svn52912-59.fc37.noarch 599/714 Verifying : texlive-pdfescape-9:svn53082-59.fc37.noarch 600/714 Verifying : texlive-pdflscape-9:svn53047-59.fc37.noarch 601/714 Verifying : texlive-pdfmanagement-testphase-9:svn59194-59.fc 602/714 Verifying : texlive-pdfpages-9:svn58212-59.fc37.noarch 603/714 Verifying : texlive-pdftex-9:20210325-49.fc37.x86_64 604/714 Verifying : texlive-pdftexcmds-9:svn55777-59.fc37.noarch 605/714 Verifying : texlive-pgf-9:svn57240-59.fc37.noarch 606/714 Verifying : texlive-picture-9:svn54867-59.fc37.noarch 607/714 Verifying : texlive-placeins-9:svn19848.2.2-59.fc37.noarch 608/714 Verifying : texlive-plain-9:svn57963-59.fc37.noarch 609/714 Verifying : texlive-polyglossia-9:svn58869-59.fc37.noarch 610/714 Verifying : texlive-psfrag-9:svn15878.3.04-59.fc37.noarch 611/714 Verifying : texlive-pslatex-9:svn57434-59.fc37.noarch 612/714 Verifying : texlive-psnfss-9:svn54694-59.fc37.noarch 613/714 Verifying : texlive-pspicture-9:svn15878.0-59.fc37.noarch 614/714 Verifying : texlive-pst-3d-9:svn17257.1.10-59.fc37.noarch 615/714 Verifying : texlive-pst-coil-9:svn37377.1.07-59.fc37.noarch 616/714 Verifying : texlive-pst-eps-9:svn15878.1.0-59.fc37.noarch 617/714 Verifying : texlive-pst-fill-9:svn15878.1.01-59.fc37.noarch 618/714 Verifying : texlive-pst-grad-9:svn15878.1.06-59.fc37.noarch 619/714 Verifying : texlive-pst-math-9:svn49425-59.fc37.noarch 620/714 Verifying : texlive-pst-node-9:svn54687-59.fc37.noarch 621/714 Verifying : texlive-pst-ovl-9:svn54963-59.fc37.noarch 622/714 Verifying : texlive-pst-plot-9:svn54080-59.fc37.noarch 623/714 Verifying : texlive-pst-text-9:svn49542-59.fc37.noarch 624/714 Verifying : texlive-pst-tools-9:svn54518-59.fc37.noarch 625/714 Verifying : texlive-pst-tree-9:svn43272-59.fc37.noarch 626/714 Verifying : texlive-pstricks-add-9:svn53763-59.fc37.noarch 627/714 Verifying : texlive-pstricks-9:svn58371-59.fc37.noarch 628/714 Verifying : texlive-pxfonts-9:svn15878.0-59.fc37.noarch 629/714 Verifying : texlive-qstest-9:svn15878.0-59.fc37.noarch 630/714 Verifying : texlive-ragged2e-9:svn57638-59.fc37.noarch 631/714 Verifying : texlive-rcs-9:svn15878.0-59.fc37.noarch 632/714 Verifying : texlive-realscripts-9:svn56594-59.fc37.noarch 633/714 Verifying : texlive-refcount-9:svn53164-59.fc37.noarch 634/714 Verifying : texlive-rerunfilecheck-9:svn54841-59.fc37.noarch 635/714 Verifying : texlive-rsfs-9:svn15878.0-59.fc37.noarch 636/714 Verifying : texlive-sansmath-9:svn17997.1.1-59.fc37.noarch 637/714 Verifying : texlive-sansmathaccent-9:svn53628-59.fc37.noarch 638/714 Verifying : texlive-sauerj-9:svn15878.0-59.fc37.noarch 639/714 Verifying : texlive-section-9:svn20180.0-59.fc37.noarch 640/714 Verifying : texlive-seminar-9:svn34011.1.62-59.fc37.noarch 641/714 Verifying : texlive-sepnum-9:svn20186.2.0-59.fc37.noarch 642/714 Verifying : texlive-setspace-9:svn24881.6.7a-59.fc37.noarch 643/714 Verifying : texlive-showexpl-9:svn57414-59.fc37.noarch 644/714 Verifying : texlive-soul-9:svn56495-59.fc37.noarch 645/714 Verifying : texlive-stringenc-9:svn52982-59.fc37.noarch 646/714 Verifying : texlive-subfig-9:svn15878.1.3-59.fc37.noarch 647/714 Verifying : texlive-symbol-9:svn31835.0-59.fc37.noarch 648/714 Verifying : texlive-tex-9:20210325-49.fc37.x86_64 649/714 Verifying : texlive-tex-gyre-math-9:svn41264-59.fc37.noarch 650/714 Verifying : texlive-tex-gyre-9:svn48058-59.fc37.noarch 651/714 Verifying : texlive-tex-ini-files-9:svn40533-59.fc37.noarch 652/714 Verifying : texlive-texlive-common-doc-9:svn54176-59.fc37.no 653/714 Verifying : texlive-texlive-en-9:20210325-49.fc37.noarch 654/714 Verifying : texlive-texlive-msg-translations-9:svn59096-59.f 655/714 Verifying : texlive-texlive-scripts-9:20210325-49.fc37.noarc 656/714 Verifying : texlive-texlive-scripts-extra-9:20210325-49.fc37 657/714 Verifying : 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Verifying : texlive-xpatch-9:svn54563-59.fc37.noarch 689/714 Verifying : texlive-xstring-9:svn49946-59.fc37.noarch 690/714 Verifying : texlive-xunicode-9:svn30466.0.981-59.fc37.noarch 691/714 Verifying : texlive-zapfchan-9:svn31835.0-59.fc37.noarch 692/714 Verifying : texlive-zapfding-9:svn31835.0-59.fc37.noarch 693/714 Verifying : texlive-zref-9:svn56611-59.fc37.noarch 694/714 Verifying : tre-0.8.0-37.20140228gitc2f5d13.fc37.x86_64 695/714 Verifying : tre-common-0.8.0-37.20140228gitc2f5d13.fc37.noar 696/714 Verifying : tre-devel-0.8.0-37.20140228gitc2f5d13.fc37.x86_6 697/714 Verifying : tzdata-java-2022a-4.fc37.noarch 698/714 Verifying : urw-base35-bookman-fonts-20200910-15.fc37.noarch 699/714 Verifying : urw-base35-c059-fonts-20200910-15.fc37.noarch 700/714 Verifying : urw-base35-d050000l-fonts-20200910-15.fc37.noarc 701/714 Verifying : urw-base35-fonts-20200910-15.fc37.noarch 702/714 Verifying : urw-base35-fonts-common-20200910-15.fc37.noarch 703/714 Verifying : 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texlive-pst-fill-9:svn15878.1.01-59.fc37.noarch texlive-pst-grad-9:svn15878.1.06-59.fc37.noarch texlive-pst-math-9:svn49425-59.fc37.noarch texlive-pst-node-9:svn54687-59.fc37.noarch texlive-pst-ovl-9:svn54963-59.fc37.noarch texlive-pst-plot-9:svn54080-59.fc37.noarch texlive-pst-text-9:svn49542-59.fc37.noarch texlive-pst-tools-9:svn54518-59.fc37.noarch texlive-pst-tree-9:svn43272-59.fc37.noarch texlive-pstricks-9:svn58371-59.fc37.noarch texlive-pstricks-add-9:svn53763-59.fc37.noarch texlive-pxfonts-9:svn15878.0-59.fc37.noarch texlive-qstest-9:svn15878.0-59.fc37.noarch texlive-ragged2e-9:svn57638-59.fc37.noarch texlive-rcs-9:svn15878.0-59.fc37.noarch texlive-realscripts-9:svn56594-59.fc37.noarch texlive-refcount-9:svn53164-59.fc37.noarch texlive-rerunfilecheck-9:svn54841-59.fc37.noarch texlive-rsfs-9:svn15878.0-59.fc37.noarch texlive-sansmath-9:svn17997.1.1-59.fc37.noarch texlive-sansmathaccent-9:svn53628-59.fc37.noarch texlive-sauerj-9:svn15878.0-59.fc37.noarch texlive-section-9:svn20180.0-59.fc37.noarch texlive-seminar-9:svn34011.1.62-59.fc37.noarch texlive-sepnum-9:svn20186.2.0-59.fc37.noarch texlive-setspace-9:svn24881.6.7a-59.fc37.noarch texlive-showexpl-9:svn57414-59.fc37.noarch texlive-soul-9:svn56495-59.fc37.noarch texlive-stringenc-9:svn52982-59.fc37.noarch texlive-subfig-9:svn15878.1.3-59.fc37.noarch texlive-symbol-9:svn31835.0-59.fc37.noarch texlive-tex-9:20210325-49.fc37.x86_64 texlive-tex-gyre-9:svn48058-59.fc37.noarch texlive-tex-gyre-math-9:svn41264-59.fc37.noarch texlive-tex-ini-files-9:svn40533-59.fc37.noarch texlive-texlive-common-doc-9:svn54176-59.fc37.noarch texlive-texlive-en-9:20210325-49.fc37.noarch texlive-texlive-msg-translations-9:svn59096-59.fc37.noarch texlive-texlive-scripts-9:20210325-49.fc37.noarch texlive-texlive-scripts-extra-9:20210325-49.fc37.noarch texlive-texlive.infra-9:20210325-49.fc37.noarch texlive-textcase-9:svn52092-59.fc37.noarch texlive-thumbpdf-9:20210325-49.fc37.noarch texlive-times-9:svn35058.0-59.fc37.noarch texlive-tipa-9:svn29349.1.3-59.fc37.noarch texlive-titlesec-9:svn52413-59.fc37.noarch texlive-tools-9:svn56514-59.fc37.noarch texlive-translator-9:svn56052-59.fc37.noarch texlive-transparent-9:svn52981-59.fc37.noarch texlive-txfonts-9:svn15878.0-59.fc37.noarch texlive-typehtml-9:svn17134.0-59.fc37.noarch texlive-ucharcat-9:svn38907-59.fc37.noarch texlive-ucs-9:svn35853.2.2-59.fc37.noarch texlive-underscore-9:svn18261.0-59.fc37.noarch texlive-unicode-data-9:svn56768-59.fc37.noarch texlive-unicode-math-9:svn56594-59.fc37.noarch texlive-uniquecounter-9:svn53162-59.fc37.noarch texlive-upquote-9:svn26059.v1.3-59.fc37.noarch texlive-url-9:svn32528.3.4-59.fc37.noarch texlive-utopia-9:svn15878.0-59.fc37.noarch texlive-varwidth-9:svn24104.0.92-59.fc37.noarch texlive-wasy-9:svn53533-59.fc37.noarch texlive-wasy-type1-9:svn53534-59.fc37.noarch texlive-wasysym-9:svn54080-59.fc37.noarch texlive-xcolor-9:svn41044-59.fc37.noarch texlive-xdvi-9:20210325-49.fc37.x86_64 texlive-xetex-9:20210325-49.fc37.x86_64 texlive-xetexconfig-9:svn45845-59.fc37.noarch texlive-xifthen-9:svn38929-59.fc37.noarch texlive-xkeyval-9:svn57006-59.fc37.noarch texlive-xltxtra-9:svn56594-59.fc37.noarch texlive-xpatch-9:svn54563-59.fc37.noarch texlive-xstring-9:svn49946-59.fc37.noarch texlive-xunicode-9:svn30466.0.981-59.fc37.noarch texlive-zapfchan-9:svn31835.0-59.fc37.noarch texlive-zapfding-9:svn31835.0-59.fc37.noarch texlive-zref-9:svn56611-59.fc37.noarch tk-1:8.6.12-3.fc37.x86_64 tk-devel-1:8.6.12-3.fc37.x86_64 tre-0.8.0-37.20140228gitc2f5d13.fc37.x86_64 tre-common-0.8.0-37.20140228gitc2f5d13.fc37.noarch tre-devel-0.8.0-37.20140228gitc2f5d13.fc37.x86_64 tzdata-java-2022a-4.fc37.noarch urw-base35-bookman-fonts-20200910-15.fc37.noarch urw-base35-c059-fonts-20200910-15.fc37.noarch urw-base35-d050000l-fonts-20200910-15.fc37.noarch urw-base35-fonts-20200910-15.fc37.noarch urw-base35-fonts-common-20200910-15.fc37.noarch urw-base35-gothic-fonts-20200910-15.fc37.noarch urw-base35-nimbus-mono-ps-fonts-20200910-15.fc37.noarch urw-base35-nimbus-roman-fonts-20200910-15.fc37.noarch urw-base35-nimbus-sans-fonts-20200910-15.fc37.noarch urw-base35-p052-fonts-20200910-15.fc37.noarch urw-base35-standard-symbols-ps-fonts-20200910-15.fc37.noarch urw-base35-z003-fonts-20200910-15.fc37.noarch valgrind-1:3.19.0-4.fc37.x86_64 valgrind-devel-1:3.19.0-4.fc37.x86_64 xml-common-0.6.3-59.fc37.noarch xorg-x11-proto-devel-2022.1-2.fc37.noarch xz-devel-5.2.5-10.fc37.x86_64 zlib-devel-1.2.12-4.fc37.x86_64 zziplib-0.13.72-2.fc37.x86_64 Complete! Finish: build setup for R-4.2.1-3.fc37.src.rpm Start: rpmbuild R-4.2.1-3.fc37.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1659916800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.JLQJaw + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf R-4.2.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/R-4.2.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd R-4.2.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #1 (R-3.3.0-fix-java_path-in-javareconf.patch):' Patch #1 (R-3.3.0-fix-java_path-in-javareconf.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fixpath --fuzz=0 patching file src/scripts/javareconf.in Hunk #1 succeeded at 79 (offset 1 line). + cat + chmod +x /builddir/build/BUILD/R-4.2.1/R-prov + cat + chmod +x /builddir/build/BUILD/R-4.2.1/R-req + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.LdPJmG + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' -f /usr/lib/rpm/generate-rpm-note.sh ']' + /usr/lib/rpm/generate-rpm-note.sh R 4.2.1-3.fc37 x86_64 + cd R-4.2.1 + sed -i 's|R_LIBS_SITE=${R_LIBS_SITE:-'\''%S'\''}|#R_LIBS_SITE=${R_LIBS_SITE:-'\''%S'\''}|g' etc/Renviron.in + echo 'R_LIBS_SITE=${R_LIBS_SITE-'\''/usr/local/lib/R/site-library:/usr/local/lib/R/library:/usr/lib64/R/library:/usr/share/R/library'\''}' + export R_PDFVIEWER=/usr/bin/xdg-open + R_PDFVIEWER=/usr/bin/xdg-open + export R_PRINTCMD=lpr + R_PRINTCMD=lpr + export R_BROWSER=/usr/bin/xdg-open + R_BROWSER=/usr/bin/xdg-open + case "x86_64" in + export 'CC=gcc -m64' + CC='gcc -m64' + export 'CXX=g++ -m64' + CXX='g++ -m64' + export 'F77=gfortran -m64' + F77='gfortran -m64' + export 'FC=gfortran -m64' + FC='gfortran -m64' + export 'FCFLAGS=-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls' + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls' + export 'FFLAGS=-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls' + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls' + sed -i '/"checking whether the BLAS is complete/i r_cv_complete_blas=yes' configure + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + tee CONFIGURE.log + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC='gcc -m64' + export CC + CXX='g++ -m64' + export CXX + '[' x '!=' x ']' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./tools/config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./tools/config.sub ++ basename ./tools/config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./tools/config.sub '/usr/lib/rpm/redhat/config.sub' -> './tools/config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./tools/config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./tools/config.guess ++ basename ./tools/config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./tools/config.guess '/usr/lib/rpm/redhat/config.guess' -> './tools/config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./tools/ltmain.sh + ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-system-tre --with-system-valgrind-headers --with-lapack --with-blas=flexiblas --with-tcl-config=/usr/lib64/tclConfig.sh --with-tk-config=/usr/lib64/tkConfig.sh --enable-R-shlib --enable-prebuilt-html --enable-R-profiling --enable-memory-profiling MAKEINFO=texi2any rdocdir=/usr/share/doc/R rincludedir=/usr/include/R rsharedir=/usr/share/R configure: WARNING: unrecognized options: --disable-dependency-tracking checking build system type... x86_64-redhat-linux-gnu checking host system type... x86_64-redhat-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /usr/bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /usr/bin/sed checking for which... /usr/bin/which checking for less... /usr/bin/less checking for gtar... /usr/bin/gtar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 5.1... yes checking for ginstall-info... no checking for install-info... /usr/sbin/install-info checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... found zi4.sty checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for gzip... /usr/bin/gzip checking for bzip2... /usr/bin/bzip2 using default browser ... /usr/bin/xdg-open checking for /usr/bin/xdg-open... /usr/bin/xdg-open checking for working aclocal... found checking for working autoconf... found checking for working autoheader... found checking for bison... no checking for byacc... no checking for yacc... no checking for notangle... false checking for realpath... /usr/bin/realpath checking for pkg-config... /usr/bin/pkg-config checking for x86_64-redhat-linux-gnu-gcc... gcc -m64 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc -m64 accepts -g... yes checking for gcc -m64 option to enable C11 features... none needed checking how to run the C preprocessor... gcc -m64 -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking whether gcc -m64 needs -traditional... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking for sys/time.h... yes checking for sys/param.h... yes checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking how to run the C preprocessor... gcc -m64 -E looking for a modern Fortran compiler checking for x86_64-redhat-linux-gnu-gfortran... gfortran -m64 checking whether the compiler supports GNU Fortran... yes checking whether gfortran -m64 accepts -g... yes checking whether the compiler supports GNU C++... yes checking whether g++ -m64 accepts -g... yes checking for g++ -m64 option to enable C++11 features... none needed checking whether g++ -m64 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection can compile C++ code... yes checking how to run the C++ preprocessor... g++ -m64 -E checking whether __attribute__((visibility())) is supported... yes checking whether gcc -m64 accepts -fvisibility... yes checking whether g++ -m64 accepts -fvisibility... yes checking whether gfortran -m64 accepts -fvisibility... yes checking for x86_64-redhat-linux-gnu-gcc... no checking for x86_64-redhat-linux-gnu-objcc... no checking for x86_64-redhat-linux-gnu-objc... no checking for x86_64-redhat-linux-gnu-cc... no checking for x86_64-redhat-linux-gnu-CC... no checking for x86_64-redhat-linux-gnu-clang... no checking for gcc... gcc checking whether the compiler supports GNU Objective C... no checking whether gcc accepts -g... no checking whether g++ -m64 can compile ObjC++... no checking whether can compile ObjC++... no checking for Objective C++ compiler... no working ObjC++ compiler found checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc -m64... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-redhat-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-redhat-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-redhat-linux-gnu-ar... 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(cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands configure: WARNING: unrecognized options: --disable-dependency-tracking R is now configured for x86_64-redhat-linux-gnu Source directory: . Installation directory: /usr C compiler: gcc -m64 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Fortran fixed-form compiler: gfortran -m64 -fno-optimize-sibling-calls -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls Default C++ compiler: g++ -m64 -std=gnu++14 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection C++11 compiler: g++ -m64 -std=gnu++11 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection C++14 compiler: g++ -m64 -std=gnu++14 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection C++17 compiler: g++ -m64 -std=gnu++17 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection C++20 compiler: g++ -m64 -std=gnu++20 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Fortran free-form compiler: gfortran -m64 -fno-optimize-sibling-calls -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls Obj-C compiler: Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(FlexiBlas), LAPACK(in blas), tre, curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling, memory profiling, static HTML Capabilities skipped: Options not enabled: shared BLAS Recommended packages: yes + cat CONFIGURE.log + grep -A30 'R is now' - + make V=1 make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/m4' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/m4' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/tools' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/tools' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/html' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/html' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/manual' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/etc' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/etc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/share' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/share' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/scripts' creating src/scripts/R.fe make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/scripts' mkdir -p -- ../../bin make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/scripts' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/scripts' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/include' mkdir -p -- ../../include make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/include/R_ext' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/include' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra/xdr' making xdr.d from xdr.c making xdr_float.d from xdr_float.c making xdr_mem.d from xdr_mem.c making xdr_stdio.d from xdr_stdio.c make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra/xdr' gcc -m64 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c xdr.c -o xdr.o gcc -m64 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c xdr_float.c -o xdr_float.o gcc -m64 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c xdr_mem.c -o xdr_mem.o gcc -m64 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c xdr_stdio.c -o xdr_stdio.o ar -cr libxdr.a xdr.o xdr_float.o xdr_mem.o xdr_stdio.o ranlib libxdr.a make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra/xdr' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra/xdr' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/appl' gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c integrate.c -o integrate.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c interv.c -o interv.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c maxcol.c -o maxcol.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c optim.c -o optim.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pretty.c -o pretty.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c uncmin.c -o uncmin.o gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dchdc.f -o dchdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dpbfa.f -o dpbfa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dpbsl.f -o dpbsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dpoco.f -o dpoco.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dpodi.f -o dpodi.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dpofa.f -o dpofa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dposl.f -o dposl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dqrdc.f -o dqrdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dqrdc2.f -o dqrdc2.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dqrls.f -o dqrls.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dqrsl.f -o dqrsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dqrutl.f -o dqrutl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dsvdc.f -o dsvdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dtrco.f -o dtrco.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dtrsl.f -o dtrsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/appl' #@make install-Linpack make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/appl' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/nmath' gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mlutils.c -o mlutils.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c d1mach.c -o d1mach.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c i1mach.c -o i1mach.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fmax2.c -o fmax2.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fmin2.c -o fmin2.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fprec.c -o fprec.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fround.c -o fround.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ftrunc.c -o ftrunc.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sign.c -o sign.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fsign.c -o fsign.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c imax2.c -o imax2.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c imin2.c -o imin2.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chebyshev.c -o chebyshev.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c log1p.c -o log1p.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lgammacor.c -o lgammacor.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gammalims.c -o gammalims.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c stirlerr.c -o stirlerr.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bd0.c -o bd0.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gamma.c -o gamma.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lgamma.c -o lgamma.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gamma_cody.c -o gamma_cody.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c beta.c -o beta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lbeta.c -o lbeta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c polygamma.c -o polygamma.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cospi.c -o cospi.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_i.c -o bessel_i.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_j.c -o bessel_j.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_k.c -o bessel_k.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_y.c -o bessel_y.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c choose.c -o choose.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c snorm.c -o snorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sexp.c -o sexp.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgamma.c -o dgamma.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pgamma.c -o pgamma.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qgamma.c -o qgamma.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rgamma.c -o rgamma.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dbeta.c -o dbeta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pbeta.c -o pbeta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qbeta.c -o qbeta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rbeta.c -o rbeta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dunif.c -o dunif.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c punif.c -o punif.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qunif.c -o qunif.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c runif.c -o runif.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnorm.c -o dnorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnorm.c -o pnorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnorm.c -o qnorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnorm.c -o rnorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dlnorm.c -o dlnorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plnorm.c -o plnorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qlnorm.c -o qlnorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rlnorm.c -o rlnorm.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c df.c -o df.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pf.c -o pf.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qf.c -o qf.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rf.c -o rf.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnf.c -o dnf.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dt.c -o dt.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pt.c -o pt.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qt.c -o qt.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rt.c -o rt.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnt.c -o dnt.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dchisq.c -o dchisq.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pchisq.c -o pchisq.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qchisq.c -o qchisq.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rchisq.c -o rchisq.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnchisq.c -o rnchisq.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dbinom.c -o dbinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pbinom.c -o pbinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qbinom.c -o qbinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rbinom.c -o rbinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rmultinom.c -o rmultinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dcauchy.c -o dcauchy.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pcauchy.c -o pcauchy.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qcauchy.c -o qcauchy.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rcauchy.c -o rcauchy.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dexp.c -o dexp.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pexp.c -o pexp.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qexp.c -o qexp.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rexp.c -o rexp.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgeom.c -o dgeom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pgeom.c -o pgeom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qgeom.c -o qgeom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rgeom.c -o rgeom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dhyper.c -o dhyper.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c phyper.c -o phyper.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qhyper.c -o qhyper.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rhyper.c -o rhyper.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnbinom.c -o dnbinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnbinom.c -o pnbinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbinom.c -o qnbinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbinom_mu.c -o qnbinom_mu.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnbinom.c -o rnbinom.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dpois.c -o dpois.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ppois.c -o ppois.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qpois.c -o qpois.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpois.c -o rpois.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dweibull.c -o dweibull.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pweibull.c -o pweibull.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qweibull.c -o qweibull.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rweibull.c -o rweibull.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dlogis.c -o dlogis.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plogis.c -o plogis.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qlogis.c -o qlogis.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rlogis.c -o rlogis.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnchisq.c -o dnchisq.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnchisq.c -o pnchisq.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnchisq.c -o qnchisq.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnbeta.c -o dnbeta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnbeta.c -o pnbeta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbeta.c -o qnbeta.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnf.c -o pnf.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnt.c -o pnt.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnf.c -o qnf.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnt.c -o qnt.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ptukey.c -o ptukey.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qtukey.c -o qtukey.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c toms708.c -o toms708.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c wilcox.c -o wilcox.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/nmath' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/nmath' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/unix' gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Rembedded.c -o Rembedded.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dynload.c -o dynload.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c system.c -o system.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sys-unix.c -o sys-unix.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sys-std.c -o sys-std.o gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/unix' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/unix' gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -DR_HOME='"/builddir/build/BUILD/R-4.2.1"' \ -o Rscript ./Rscript.c make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/unix' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/unix' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altclasses.d from altclasses.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making clippath.d from clippath.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making main.d from main.c making mapply.d from mapply.c making mask.d from mask.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making patterns.d from patterns.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/main' gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c CommandLineArgs.c -o CommandLineArgs.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Rdynload.c -o Rdynload.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Renviron.c -o Renviron.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c RNG.c -o RNG.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agrep.c -o agrep.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c altclasses.c -o altclasses.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c altrep.c -o altrep.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c apply.c -o apply.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c arithmetic.c -o arithmetic.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c array.c -o array.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c attrib.c -o attrib.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bind.c -o bind.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c builtin.c -o builtin.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c character.c -o character.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c clippath.c -o clippath.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coerce.c -o coerce.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c colors.c -o colors.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c complex.c -o complex.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c connections.c -o connections.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c context.c -o context.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cum.c -o cum.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dcf.c -o dcf.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c datetime.c -o datetime.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c debug.c -o debug.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c deparse.c -o deparse.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c devices.c -o devices.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dotcode.c -o dotcode.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dounzip.c -o dounzip.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dstruct.c -o dstruct.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c duplicate.c -o duplicate.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c edit.c -o edit.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c engine.c -o engine.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c envir.c -o envir.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c errors.c -o errors.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eval.c -o eval.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c format.c -o format.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gevents.c -o gevents.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gram.c -o gram.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gram-ex.c -o gram-ex.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c graphics.c -o graphics.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c grep.c -o grep.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c identical.c -o identical.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c inlined.c -o inlined.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c inspect.c -o inspect.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c internet.c -o internet.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c iosupport.c -o iosupport.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lapack.c -o lapack.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c list.c -o list.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c localecharset.c -o localecharset.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c logic.c -o logic.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c main.c -o main.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mapply.c -o mapply.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mask.c -o mask.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c match.c -o match.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c memory.c -o memory.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c names.c -o names.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c objects.c -o objects.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c options.c -o options.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c paste.c -o paste.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c patterns.c -o patterns.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c platform.c -o platform.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plot.c -o plot.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plot3d.c -o plot3d.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plotmath.c -o plotmath.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c print.c -o print.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c printarray.c -o printarray.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c printvector.c -o printvector.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c printutils.c -o printutils.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qsort.c -o qsort.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c radixsort.c -o radixsort.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c random.c -o random.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c raw.c -o raw.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c registration.c -o registration.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c relop.c -o relop.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rlocale.c -o rlocale.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c saveload.c -o saveload.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c scan.c -o scan.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c seq.c -o seq.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c serialize.c -o serialize.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sort.c -o sort.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c source.c -o source.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c split.c -o split.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sprintf.c -o sprintf.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c startup.c -o startup.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c subassign.c -o subassign.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c subscript.c -o subscript.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c subset.c -o subset.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c summary.c -o summary.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sysutils.c -o sysutils.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c times.c -o times.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c unique.c -o unique.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util.c -o util.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c version.c -o version.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c g_alab_her.c -o g_alab_her.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c g_cntrlify.c -o g_cntrlify.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c g_fontdb.c -o g_fontdb.o gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c g_her_glyph.c -o g_her_glyph.o gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c xxxpr.f -o xxxpr.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -m64 -shared -fopenmp -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/xdr/libxdr.a -lflexiblas -lgfortran -lm -lquadmath -lreadline -ltre -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/main' mkdir -p -- /builddir/build/BUILD/R-4.2.1/bin/exec mkdir -p -- /builddir/build/BUILD/R-4.2.1/lib make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/main' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/main' gcc -m64 -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Rmain.c -o Rmain.o gcc -m64 -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R.bin Rmain.o -lR make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/main' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/main' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/main' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making sock.d from sock.c making sockconn.d from sockconn.c make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/internet' gcc -m64 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c internet.c -o internet.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c libcurl.c -o libcurl.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c sock.c -o sock.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -c sockconn.c -o sockconn.o gcc -m64 -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -lR make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/internet' mkdir -p -- /builddir/build/BUILD/R-4.2.1/modules make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/internet' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/internet' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/internet' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/lapack' making Lapack.d from Lapack.c make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/lapack' gcc -m64 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Lapack.c -o Lapack.o gcc -m64 -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o lapack.so Lapack.o -lR -lflexiblas -lgfortran -lm -lquadmath make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/lapack' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/lapack' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/lapack' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/lapack' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/X11' gcc -m64 -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c devX11.c -o devX11.o gcc -m64 -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rotated.c -o rotated.o gcc -m64 -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rbitmap.c -o rbitmap.o gcc -m64 -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lz -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm gcc -m64 -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dataentry.c -o dataentry.o gcc -m64 -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/X11' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/X11' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/X11' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/X11' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' mkdir -p -- ../../library make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/profile' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/translations' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/translations' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/translations' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/base' building package 'base' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/base' mkdir -p -- ../../../library/base/demo make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/base' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' mkdir -p -- ../../../library/tools/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c making pdscan.d from pdscan.c gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c text.c -o text.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Rmd5.c -o Rmd5.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c md5.c -o md5.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c signals.c -o signals.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c install.c -o install.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c getfmts.c -o getfmts.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c http.c -o http.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gramLatex.c -o gramLatex.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gramRd.c -o gramRd.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pdscan.c -o pdscan.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tools/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tools/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' installing 'sysdata.rda' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/compiler' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/compiler' byte-compiling package 'compiler' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/compiler' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/compiler' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/base' byte-compiling package 'base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/base' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' byte-compiling package 'tools' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tools' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c making hashtab.d from hashtab.c gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c io.c -o io.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c size.c -o size.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sock.c -o sock.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c stubs.c -o stubs.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c utils.c -o utils.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c hashtab.c -o hashtab.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/utils/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/utils/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' installing 'sysdata.rda' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' byte-compiling package 'utils' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/utils' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/icc make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making clippath.d from clippath.c making patterns.d from patterns.c making mask.d from mask.c making group.d from group.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c axis_scales.c -o axis_scales.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chull.c -o chull.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c devices.c -o devices.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c stubs.c -o stubs.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c colors.c -o colors.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c clippath.c -o clippath.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c patterns.c -o patterns.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mask.c -o mask.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c group.c -o group.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c devCairo.c -o devCairo.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c devPicTeX.c -o devPicTeX.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c devPS.c -o devPS.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c devQuartz.c -o devQuartz.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[7]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[8]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src/cairo' make[9]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src/cairo' gcc -m64 -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../../../src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cairoBM.c -o cairoBM.o gcc -m64 -shared -L"../../../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lz -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lcairo -lpng16 -lz -L"../../../../../lib" -lR -lm make[9]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src/cairo' make[8]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src/cairo' make[7]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src/cairo' make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices' byte-compiling package 'grDevices' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grDevices' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c base.c -o base.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c graphics.c -o graphics.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c par.c -o par.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plot.c -o plot.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plot3d.c -o plot3d.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c stem.c -o stem.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics' byte-compiling package 'graphics' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/graphics' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats' mkdir -p -- ../../../library/stats/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c kmeans.c -o kmeans.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ansari.c -o ansari.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bandwidths.c -o bandwidths.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chisqsim.c -o chisqsim.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c d2x2xk.c -o d2x2xk.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fexact.c -o fexact.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c kendall.c -o kendall.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ks.c -o ks.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c line.c -o line.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c smooth.c -o smooth.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c prho.c -o prho.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c swilk.c -o swilk.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ksmooth.c -o ksmooth.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c loessc.c -o loessc.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c monoSpl.c -o monoSpl.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c isoreg.c -o isoreg.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Srunmed.c -o Srunmed.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dblcen.c -o dblcen.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c distance.c -o distance.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c hclust-utils.c -o hclust-utils.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c nls.c -o nls.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rWishart.c -o rWishart.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c HoltWinters.c -o HoltWinters.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c PPsum.c -o PPsum.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c arima.c -o arima.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c burg.c -o burg.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c filter.c -o filter.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mAR.c -o mAR.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pacf.c -o pacf.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c starma.c -o starma.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c port.c -o port.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c family.c -o family.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sbart.c -o sbart.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c approx.c -o approx.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c loglin.c -o loglin.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lowess.c -o lowess.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c massdist.c -o massdist.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c splines.c -o splines.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lm.c -o lm.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c complete_cases.c -o complete_cases.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cov.c -o cov.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c deriv.c -o deriv.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fft.c -o fft.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fourier.c -o fourier.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c model.c -o model.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c optim.c -o optim.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c optimize.c -o optimize.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c integrate.c -o integrate.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c random.c -o random.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c distn.c -o distn.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c zeroin.c -o zeroin.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rcont.c -o rcont.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c influence.c -o influence.o gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c bsplvd.f -o bsplvd.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c bvalue.f -o bvalue.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c bvalus.f -o bvalus.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c loessf.f -o loessf.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c ppr.f -o ppr.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c qsbart.f -o qsbart.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c sgram.f -o sgram.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c sinerp.f -o sinerp.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c sslvrg.f -o sslvrg.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c stxwx.f -o stxwx.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c hclust.f -o hclust.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c kmns.f -o kmns.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c eureka.f -o eureka.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c stl.f -o stl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -msse2 -mfpmath=sse -c portsrc.f -o portsrc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran portsrc.f:6663:72: 6663 | NCOMP = NCOMP + 1 | ^ Warning: 'ncomp' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:6575:26: 6575 | * MAXLST,NCOMP,NUMINC,NUMLST,NUMORD,NUMWGT | ^ note: 'ncomp' was declared here portsrc.f:6648:72: 6648 | LIST(JCOL) = NUMORD | ^ Warning: 'jcol' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:6574:44: 6574 | INTEGER DEG,HEAD,IC,IP,IPL,IPU,IR,JCOL,JP,JPL,JPU,L,MAXINC, | ^ note: 'jcol' was declared here portsrc.f:5521:51: 5521 | IF (ALPHAK .LE. ZERO .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) | ^ Warning: 'alphak' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:5377:37: 5377 | DOUBLE PRECISION A, ADI, ALPHAK, B, DFACSQ, DST, DTOL, D1, D2, | ^ note: 'alphak' was declared here portsrc.f:5658:18: 5658 | IF (ALPHAK .GE. TWOPSI*PSIFAC) GO TO 310 | ^ Warning: 'psifac' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:5378:62: 5378 | 1 LK, OLDPHI, PHI, PHIMAX, PHIMIN, PSIFAC, RAD, | ^ note: 'psifac' was declared here portsrc.f:10329:55: 10329 | IF (-V(DST0) .GE. ALPHAK .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) | ^ Warning: 'alphak' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10076:29: 10076 | DOUBLE PRECISION ALPHAK, AKI, AKK, DELTA, DST, EPS, GTSTA, LK, | ^ note: 'alphak' was declared here portsrc.f:10412:72: 10412 | V(PREDUC) = HALF * (DABS(ALPHAK)*DST*DST + GTSTA) | ^ Warning: 'gtsta' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10076:63: 10076 | DOUBLE PRECISION ALPHAK, AKI, AKK, DELTA, DST, EPS, GTSTA, LK, | ^ note: 'gtsta' was declared here portsrc.f:10324:72: 10324 | LK = DMAX1(LK, PHI*W(PHIPIN)) | ^ Warning: 'phi' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10077:34: 10077 | 1 OLDPHI, PHI, PHIMAX, PHIMIN, PSIFAC, RAD, RADSQ, | ^ note: 'phi' was declared here portsrc.f:10466:10: 10466 | IF (KA .GE. KAMIN) GO TO 340 | ^ Warning: 'kamin' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10075:32: 10075 | 1 J, K, KALIM, KAMIN, K1, LK0, PHIPIN, Q, Q0, UK0, X | ^ note: 'kamin' was declared here portsrc.f:12105:58: 12105 | DOUBLE PRECISION DNWTST, GHINVG, GNORM, GNORM0, NRED, PRED, RAD, | ^ Warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:12246:72: 12246 | V(DST0) = DNWTST | ^ Warning: 'dnwtst' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:12105:29: 12105 | DOUBLE PRECISION DNWTST, GHINVG, GNORM, GNORM0, NRED, PRED, RAD, | ^ note: 'dnwtst' was declared here portsrc.f:2457:32: 2457 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ Warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:2514:72: 2514 | 60 V(DST0) = DS0 | ^ Warning: 'ds0' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:2457:26: 2457 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: 'ds0' was declared here portsrc.f:8086:32: 8086 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ Warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8173:72: 8173 | 90 V(DST0) = DS0 | ^ Warning: 'ds0' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8086:26: 8086 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: 'ds0' was declared here portsrc.f:8652:72: 8652 | 210 IV(FDH) = HES | ^ Warning: 'hes' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8450:25: 8450 | INTEGER GSAVE1, HES, HMI, HPI, HPM, I, K, KIND, L, M, MM1, MM1O2, | ^ note: 'hes' was declared here portsrc.f:3587:10: 3587 | IF (LIV .LT. MIV2) GO TO 300 | ^ Warning: 'miv2' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:3520:54: 3520 | INTEGER ALG1, I, II, IV1, J, K, L, M, MIV1, MIV2, NDFALT, PARSV1, | ^ note: 'miv2' was declared here portsrc.f:12079:72: 12079 | 270 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) | ^ Warning: 'g1' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:11822:16: 11822 | INTEGER G1, GI, I, IV1, IVMODE, JTOL1, L, LH, NN, QTR1, | ^ note: 'g1' was declared here portsrc.f:458:72: 458 | 300 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) | ^ Warning: 'g1' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:157:16: 157 | INTEGER G1, GI, I, IV1, IVMODE, JTOL1, K, L, LH, NN, QTR1, | ^ note: 'g1' was declared here gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c lminfl.f -o lminfl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -lflexiblas -lgfortran -lm -lquadmath -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats' byte-compiling package 'stats' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/datasets' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/datasets' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/methods' mkdir -p -- ../../../library/methods/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/methods' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/methods' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c do_substitute_direct.c -o do_substitute_direct.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c methods_list_dispatch.c -o methods_list_dispatch.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c slot.c -o slot.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c class_support.c -o class_support.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c tests.c -o tests.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c utils.c -o utils.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/methods/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/methods/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/methods' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/methods' byte-compiling package 'methods' initializing class and method definitions ... done make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/methods' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/methods' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grid' mkdir -p -- ../../../library/grid/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grid' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grid' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grid/src' making clippath.d from clippath.c making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making mask.d from mask.c making matrix.d from matrix.c making path.d from path.c making register.d from register.c making state.d from state.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c clippath.c -o clippath.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gpar.c -o gpar.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c grid.c -o grid.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c just.c -o just.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c layout.c -o layout.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mask.c -o mask.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c matrix.c -o matrix.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c path.c -o path.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c register.c -o register.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c state.c -o state.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c unit.c -o unit.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c util.c -o util.o gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c viewport.c -o viewport.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grid/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grid/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grid' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/grid' byte-compiling package 'grid' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grid' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/grid' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/splines' mkdir -p -- ../../../library/splines/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/splines' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/splines' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/splines/src' making splines.d from splines.c gcc -m64 -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c splines.c -o splines.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o splines.so splines.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/splines/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/splines/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/splines' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/splines' byte-compiling package 'splines' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/splines' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/splines' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats4' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/stats4' byte-compiling package 'stats4' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats4' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/stats4' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk/src' making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c tcltk.c -o tcltk.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c tcltk_unix.c -o tcltk_unix.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib64 -ltcl8.6 -L/usr/lib64 -ltk8.6 -lX11 -lm -L../../../../lib -lR make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk/src' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk' byte-compiling package 'tcltk' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/tcltk' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rngstream.c -o rngstream.o gcc -m64 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fork.c -o fork.o gcc -m64 -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel' byte-compiling package 'parallel' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/parallel' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/base' installing parsed NAMESPACE files make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/tests' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/tests' you should 'make docs' now ... make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc' creating doc/NEWS creating doc/NEWS.pdf make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/html' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/html' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' installing parsed Rd make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' building/updating package metadata ... make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' writing package indices make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' building all R object docs converting help for package 'base' Arithmetic html AsIs html Bessel html CallExternal html Colon html Comparison html Constants html Control html Cstack_info html DateTimeClasses html Dates html Defunct html Deprecated html Encoding html EnvVar html Extract html Extract.data.frame html Extract.factor html Extremes html Foreign-internal html Foreign html Hyperbolic html ISOdatetime html Internal html InternalMethods html La_library html La_version html Last.value html Log html Logic html LongVectors html MathFun html Memory-limits html Memory html NA html NULL html NumericConstants html Ops.Date html Paren html Platform html Primitive html Quotes html Random-user html Random html RdUtils html Recall html Reserved html Rhome html Round html S3method html Special html StackOverflows html Startup html Syntax html Sys.getenv html Sys.getpid html Sys.glob html Sys.info html Sys.localeconv html Sys.readlink html Sys.setFileTime html Sys.setenv html Sys.sleep html Sys.time html Sys.which html Trig html UTF8filepaths html UseMethod html Vectorize html Version html abbreviate html agrep html all html all.equal html allnames html any html aperm html append html apply html args html array html as.Date html as.POSIXlt html as.data.frame html as.environment html as.function html asplit html assign html assignOps html attach html attr html attributes html autoload html backsolve html base-defunct html REDIRECT:topic Previous alias or file overwritten by alias: ../../library/base/help/Version.html REDIRECT:topic Previous alias or file overwritten by alias: ../../library/base/help/Platform.html base-deprecated html base-internal html base-package html basename html bincode html bindenv html bitwise html body html bquote html browser html browserText html builtins html by html c html call html callCC html capabilities html cat html cbind html char.expand html character html charmatch html chartr html chkDots html chol html chol2inv html class html col html colSums html colnames html commandArgs html comment html complex html conditions html conflicts html connections html contributors html copyright html crossprod html cumsum html curlGetHeaders html cut.POSIXt html cut html data.class html data.frame html data.matrix html dataframeHelpers html date html dcf html debug html delayedAssign html deparse html deparseOpts html det html detach html dev html diag html diff html difftime html dim html dimnames html do.call html dontCheck html dots html double html dput html drop html droplevels html dump html duplicated html 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add_datalist html assertCondition html bibstyle html buildVignette html buildVignettes html charsets html checkFF html checkMD5sums html checkPoFiles html checkRd html checkRdaFiles html checkTnF html checkVignettes html check_packages_in_dir html codoc html compactPDF html delimMatch html dependsOnPkgs html encoded html fileutils html find_gs_cmd html getVignetteInfo html loadRdMacros html makeLazyLoading html make_translations_pkg html makevars html md5sum html package_dependencies html package_native_routine_registration_skeleton html parseLatex html parse_Rd html print.via.format html pskill html psnice html read.00Index html showNonASCII html startDynamicHelp html testInstalledPackage html texi2dvi html toHTML html toRd html toTitleCase html tools-defunct html tools-deprecated html tools-package html undoc html updatePACKAGES html update_pkg_po html userdir html vignetteEngine html vignetteInfo html writePACKAGES html xgettext html converting help for package 'utils' BATCH html COMPILE html DLL.version html INSTALL html LINK html PkgUtils html Question html REMOVE html RHOME html RShowDoc html RSiteSearch html Rconsole html Rprof html Rprofmem html Rscript html Rtangle html RweaveLatex html SHLIB html Sweave html SweaveSyntConv html SweaveUtils html URLencode html View html adist html alarm html apropos html aregexec html arrangeWindows html askYesNo html aspell-utils html aspell html available.packages html bibentry html browseEnv html browseURL html browseVignettes html bug.report html capture.output html changedFiles html charClass html choose.dir html choose.files html chooseBioCmirror html chooseCRANmirror html citEntry html citation html cite html clipboard html close.socket html combn html compareVersion html contrib.url html count.fields html create.post html data html dataentry html debugcall html debugger html demo html download.file html download.packages html edit html edit.data.frame html example html file.edit html filetest html findCRANmirror 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select.list html sessionInfo html setRepositories html setWindowTitle html shortPathName html sourceutils html stack html str html strcapture html summaryRprof html tar html toLatex html txtProgressBar html type.convert html untar html unzip html update.packages html url.show html utils-defunct html utils-deprecated html utils-package html vignette html warnErrList html winDialog html winMenus html winProgressBar html winextras html write.table html zip html converting help for package 'grDevices' Devices html Hershey html Japanese html Type1Font html adjustcolor html as.graphicsAnnot html as.raster html axisTicks html boxplot.stats html bringToTop html cairo html cairoSymbolFont html check.options html chull html cm html col2rgb html colorRamp html colors html contourLines html convertColor html densCols html dev html dev.capabilities html dev.capture html dev.flush html dev.interactive html dev.size html dev2 html dev2bitmap html devAskNewPage html embedFonts html extendrange html getGraphicsEvent html grDevices-package html grSoftVersion html gray html gray.colors html hcl html hsv html make.rgb html msgWindow html n2mfrow html nclass html palette html palettes html pdf html pdf.options html pictex html plotmath html postscript html postscriptFonts html pretty.Date html ps.options html quartz html quartzFonts html recordGraphics html recordplot html rgb html rgb2hsv html trans3d html windows html windows.options html windowsFonts html x11 html x11Fonts html xfig html xy.coords html xyTable html xyz.coords html png html savePlot html converting help for package 'graphics' abline html arrows html assocplot html axTicks html axis.POSIXct html axis html barplot html box html boxplot html boxplot.matrix html bxp html cdplot html clip html contour html convertXY html coplot html curve html dotchart html filled.contour html fourfoldplot html frame html graphics-defunct html graphics-package html grid html hist.POSIXt html hist html identify html image html layout html legend html lines html locator html matplot html mosaicplot html mtext html pairs html panel.smooth html par html persp html pie html plot.dataframe html plot.default html plot.design html plot.factor html plot.formula html plot.raster html plot.table html plot.window html plot.xy html plothistogram html points html polygon html polypath html rasterImage html rect html rug html screen html segments html smoothScatter html spineplot html stars html stem html stripchart html strwidth html sunflowerplot html symbols html text html title html units html xspline html zAxis html converting help for package 'stats' AIC html ARMAacf html ARMAtoMA html Beta html Binomial html Cauchy html Chisquare html Distributions html Exponential html Fdist html GammaDist html Geometric html HoltWinters html Hypergeometric html IQR html KalmanLike html Logistic html Lognormal html Multinom html NLSstAsymptotic html NLSstClosestX html NLSstLfAsymptote html NLSstRtAsymptote html NegBinomial html Normal html Pair html Poisson html SSD html SSasymp html SSasympOff html SSasympOrig html SSbiexp html SSfol html SSfpl html SSgompertz html SSlogis html SSmicmen html SSweibull html SignRank html Smirnov html StructTS html TDist html Tukey html TukeyHSD html Uniform html Weibull html Wilcoxon html acf html acf2AR html add1 html addmargins html aggregate html alias html anova html anova.glm html anova.lm html anova.mlm html ansari.test html aov html approxfun html ar html ar.ols html arima html arima.sim html arima0 html as.hclust html asOneSidedFormula html ave html bandwidth html bartlett.test html binom.test html biplot html biplot.princomp html birthday html box.test html cancor html case.names html checkMFClasses html chisq.test html cmdscale html coef html complete.cases html confint html constrOptim html contrast html contrasts html convolve html cophenetic html cor html cor.test html cov.wt html cpgram html cutree html decompose html delete.response html dendrapply html dendrogram html density html deriv html deviance html df.residual html diffinv html dist html dummy.coef html ecdf html eff.aovlist html effects html embed html expand.model.frame html extractAIC html factanal html factor.scope html family html fft html filter html fisher.test html fitted.values html fivenum html fligner.test html formula html formula.nls html friedman.test html ftable html ftable.formula html getInitial html glm html glm.control html glm.summaries html hclust html heatmap html identify.hclust html influence.measures html integrate html interaction.plot html is.empty html isoreg html kernapply html kernel html kmeans html kruskal.test html ks.test html ksmooth html lag html lag.plot html line html listof html lm html lm.influence html lm.summaries html lmfit html loadings html loess html loess.control html logLik html loglin html lowess html ls.diag html ls.print html lsfit html mad html mahalanobis html make.link html makepredictcall html manova html mantelhaen.test html mauchly.test html mcnemar.test html median html medpolish html model.extract html model.frame html model.matrix html model.tables html monthplot html mood.test html na.action html na.contiguous html na.fail html nafns html naprint html nextn html nlm html nlminb html nls html nls.control html nobs html numericDeriv html offset html oneway.test html optim html optimize html order.dendrogram html p.adjust html pairwise.prop.test html pairwise.t.test html pairwise.table html pairwise.wilcox.test html plot.HoltWinters html plot.acf html plot.density html plot.isoreg html plot.lm html plot.ppr html plot.profile.nls html plot.spec html plot.stepfun html plot.ts html poisson.test html poly html power html power.anova.test html power.prop.test html power.t.test html pp.test html ppoints html ppr html prcomp html predict.HoltWinters html predict html predict.arima html predict.glm html predict.lm html predict.loess html predict.nls html predict.smooth.spline html preplot html princomp html print.power.htest html print.ts html printCoefmat html profile html profile.nls html proj html prop.test html prop.trend.test html qqnorm html quade.test html quantile html r2dtable html rWishart html read.ftable html rect.hclust html relevel html reorder.dendrogram html reorder.factor html replications html reshape html residuals html runmed html scatter.smooth html screeplot html sd html se.contrast html selfStart html setNames html shapiro.test html sigma html simulate html smooth html smooth.spline html smoothEnds html sortedXyData html spec.ar html spec.pgram html spec.taper html spectrum html splinefun html start html stat.anova html stats-defunct html stats-deprecated html stats-package html step html stepfun html stl html stlmethods html summary.aov html summary.glm html summary.lm html summary.manova html summary.nls html summary.princomp html supsmu html symnum html t.test html termplot html terms html terms.formula html terms.object html time html toeplitz html ts-methods html ts html ts.plot html ts.union html tsSmooth html tsdiag html tsp html uniroot html update html update.formula html var.test html varimax html vcov html weighted.mean html weighted.residuals html weights html wilcox.test html window html xtabs html zC html converting help for package 'datasets' AirPassengers html BJsales html BOD html ChickWeight html DNase html EuStockMarkets html Formaldehyde html HairEyeColor html Harman23.cor html Harman74.cor html Indometh html InsectSprays html JohnsonJohnson html LakeHuron html LifeCycleSavings html Loblolly html Nile html Orange html OrchardSprays html PlantGrowth html Puromycin html Theoph html Titanic html ToothGrowth html UCBAdmissions html UKDriverDeaths html UKLungDeaths html UKgas html USAccDeaths html USArrests html USJudgeRatings html USPersonalExpenditure html VADeaths html WWWusage html WorldPhones html ability.cov html airmiles html airquality html anscombe html attenu html attitude html austres html beavers html cars html chickwts html co2 html crimtab html datasets-package html discoveries html esoph html euro html eurodist html faithful html freeny html infert html iris html islands html lh html longley html lynx html morley html mtcars html nhtemp html nottem html npk html occupationalStatus html precip html presidents html pressure html quakes html randu html rivers html rock html sleep html stackloss html state html sunspot.month html sunspot.year html sunspots html swiss html treering html trees html uspop html volcano html warpbreaks html women html zCO2 html converting help for package 'methods' BasicClasses html Classes html Classes_Details html Documentation html EmptyMethodsList-class html EnvironmentClass html GenericFunctions html Introduction html LanguageClasses html LinearMethodsList-class html MethodDefinition-class html MethodSupport html MethodWithNext-class html Methods html MethodsList-class html MethodsList html Methods_Details html Methods_for_Nongenerics html Methods_for_S3 html NextMethod html ObjectsWithPackage-class html RClassUtils html RMethodUtils html S3Part html S4groupGeneric html SClassExtension-class html StructureClasses html TraceClasses html as html callGeneric html canCoerce html cbind2 html className html classRepresentation-class html classesToAM html dotsMethods html evalSource html findClass html findMethods html fixPrevious html genericFunction-class html getClass html getMethod html getPackageName html hasArg html implicitGeneric html inheritedSlotNames html initialize-methods html is html isSealedMethod html languageEl html localRefClass html method.skeleton html methodUtilities html methods-defunct html methods-deprecated html methods-package html new html nonStructure-class html promptClass html promptMethods html refClass html removeMethod html representation html selectSuperClasses html setAs html setClass html setClassUnion html setGeneric html setGroupGeneric html setIs html setLoadActions html setMethod html setOldClass html setSClass html show html showMethods html signature-class html slot html stdRefClass html substituteDirect html testInheritedMethods html validObject html zBasicFunsList html converting help for package 'grid' Grid html absolute.size html arrow html as.mask html calcStringMetric html current.viewport html dataViewport html depth html deviceLoc html drawDetails html editDetails html editViewport html explode html gEdit html gPath html getNames html gpar html grid-defunct html grid-internal html grid-package html grid.DLapply html grid.add html grid.bezier html grid.cap html grid.circle html grid.clip html grid.convert html grid.copy html grid.curve html grid.delay html grid.display.list html grid.draw html grid.edit html grid.force html grid.frame html grid.function html grid.get html grid.grab html grid.grep html grid.grill html grid.grob html grid.group html grid.layout html grid.lines html grid.locator html grid.ls html grid.move.to html grid.newpage html grid.null html grid.pack html grid.path html grid.place html grid.plot.and.legend html grid.points html grid.polygon html grid.pretty html grid.raster html grid.record html grid.rect html grid.refresh html grid.remove html grid.reorder html grid.roundrect html grid.segments html grid.set html grid.show.layout html grid.show.viewport html grid.stroke html grid.text html grid.xaxis html grid.xspline html grid.yaxis html gridCoords html grobCoords html grobName html grobWidth html grobX html legendGrob html makeContent html patterns html plotViewport html resolveRasterSize html showGrob html showViewport html stringWidth html unit html unit.c html unit.length html unit.pmin html unit.rep html unitType html valid.just html validDetails html viewport html viewportTransform html viewports html vpPath html widthDetails html xDetails html xsplinePoints html converting help for package 'splines' asVector html backSpline html bs html interpSpline html ns html periodicSpline html polySpline html predict.bSpline html predict.bs html splineDesign html splineKnots html splineOrder html splines-package html xyVector html converting help for package 'stats4' coef-methods html confint-methods html logLik-methods html mle-class html mle html plot-methods html profile-methods html profile.mle-class html show-methods html stats4-package html summary-methods html summary.mle-class html update-methods html vcov-methods html converting help for package 'tcltk' TclInterface html TkCommands html TkWidgetcmds html TkWidgets html tclServiceMode html tcltk-defunct html tcltk-package html tkProgressBar html tkStartGUI html tk_choose.dir html tk_choose.files html tk_messageBox html tk_select.list html tkpager html converting help for package 'compiler' compile html converting help for package 'parallel' RngStream html clusterApply html detectCores html makeCluster html parallel-package html splitIndices html children html mcaffinity html mcfork html mclapply html mcparallel html pvec html make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/Recommended' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library/Recommended' begin installing recommended package MASS * installing *source* package 'MASS' ... ** package 'MASS' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpvoJqTC/R.INSTALL397c4888a889/MASS/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c MASS.c -o MASS.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lqs.c -o lqs.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o MASS.so MASS.o lqs.o -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpvoJqTC/R.INSTALL397c4888a889/MASS/src' installing to /builddir/build/BUILD/R-4.2.1/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MASS' finding HTML links ... done Aids2 html Animals html Boston html Cars93 html Cushings html DDT html GAGurine html Insurance html MASS-internal html Melanoma html Null html OME html Pima.tr html Rabbit html Rubber html SP500 html Sitka html Sitka89 html Skye html Traffic html UScereal html UScrime html VA html abbey html accdeaths html addterm html anorexia html anova.negbin html area html bacteria html bandwidth.nrd html bcv html beav1 html beav2 html biopsy html birthwt html boxcox html cabbages html caith html cats html cement html chem html con2tr html confint html contr.sdif html coop html corresp html cov.rob html cov.trob html cpus html crabs html deaths html denumerate html dose.p html drivers html dropterm html eagles html epil html eqscplot html farms html fgl html fitdistr html forbes html fractions html galaxies html gamma.dispersion html gamma.shape.glm html gehan html genotype html geyser html gilgais html ginv html glm.convert html glm.nb html glmmPQL html hills html hist.scott html housing html huber html hubers html immer html isoMDS html kde2d html lda html ldahist html leuk html lm.gls html lm.ridge html loglm html loglm1 html logtrans html lqs html mammals html mca html mcycle html menarche html michelson html minn38 html motors html muscle html mvrnorm html negative.binomial html newcomb html nlschools html npk html npr1 html oats html painters html pairs.lda html parcoord html petrol html phones html plot.lda html plot.mca html plot.profile html polr html predict.glmmPQL html predict.lda html predict.lqs html predict.mca html predict.qda html profile.glm html qda html quine html rational html renumerate html rlm html rms.curv html rnegbin html road html rotifer html sammon html ships html shoes html shrimp html shuttle html snails html stdres html steam html stepAIC html stormer html studres html summary.loglm html summary.negbin html summary.rlm html survey html synth.tr html theta.md html topo html truehist html ucv html waders html whiteside html width.SJ html write.matrix html wtloss html ** building package indices ** testing if installed package can be loaded * DONE (MASS) Making 'packages.html' ... done begin installing recommended package lattice * installing *source* package 'lattice' ... ** package 'lattice' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpyQQTCm/R.INSTALL39a875ad716c/lattice/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c threeDplot.c -o threeDplot.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o lattice.so init.o threeDplot.o -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpyQQTCm/R.INSTALL39a875ad716c/lattice/src' installing to /builddir/build/BUILD/R-4.2.1/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'lattice' finding HTML links ... done Lattice html Rows html USMortality html axis.default html banking html barchart.table html barley html cloud html draw.colorkey html draw.key html environmental html ethanol html histogram html interaction html lattice.options html latticeParseFormula html level.colors html levelplot html llines html lset html make.groups html melanoma html oneway html packet.panel.default html panel.axis html panel.barchart html panel.bwplot html panel.cloud html panel.densityplot html panel.dotplot html panel.functions html panel.histogram html panel.levelplot html panel.loess html panel.number html panel.pairs html panel.parallel html panel.qqmath html panel.qqmathline html panel.smoothScatter html panel.spline html panel.stripplot html panel.superpose html panel.violin html panel.xyplot html prepanel.default html prepanel.functions html print.trellis html qq html qqmath html rfs html shingles html simpleKey html simpleTheme html singer html splom html strip.default html tmd html trellis.device html trellis.object html trellis.par.get html update.trellis html utilities.3d html xyplot html xyplot.ts html ** building package indices ** testing if installed package can be loaded * DONE (lattice) Making 'packages.html' ... done begin installing recommended package Matrix * installing *source* package 'Matrix' ... ** package 'Matrix' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c CHMfactor.c -o CHMfactor.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Csparse.c -o Csparse.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c TMatrix_as.c -o TMatrix_as.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Tsparse.c -o Tsparse.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Mutils.c -o Mutils.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chm_common.c -o chm_common.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cs.c -o cs.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cs_utils.c -o cs_utils.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dense.c -o dense.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgCMatrix.c -o dgCMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgTMatrix.c -o dgTMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgeMatrix.c -o dgeMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dpoMatrix.c -o dpoMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dppMatrix.c -o dppMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dsCMatrix.c -o dsCMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dsyMatrix.c -o dsyMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dspMatrix.c -o dspMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dtCMatrix.c -o dtCMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dtTMatrix.c -o dtTMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dtrMatrix.c -o dtrMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dtpMatrix.c -o dtpMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c factorizations.c -o factorizations.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ldense.c -o ldense.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lgCMatrix.c -o lgCMatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sparseQR.c -o sparseQR.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c abIndex.c -o abIndex.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c packedMatrix.c -o packedMatrix.o packedMatrix.c: In function 'packedMatrix_sub2': packedMatrix.c:501:25: warning: 'rn1' may be used uninitialized [-Wmaybe-uninitialized] 501 | SET_STRING_ELT(rn1, ki, NA_STRING); \ | ^~~~~~~~~~~~~~ packedMatrix.c:604:25: note: 'rn1' was declared here 604 | SEXP dn0, dn1, rn0, rn1, cn0, cn1; | ^~~ packedMatrix.c:469:25: warning: 'cn1' may be used uninitialized [-Wmaybe-uninitialized] 469 | SET_STRING_ELT(cn1, kj, NA_STRING); \ | ^~~~~~~~~~~~~~ packedMatrix.c:604:35: note: 'cn1' was declared here 604 | SEXP dn0, dn1, rn0, rn1, cn0, cn1; | ^~~ packedMatrix.c:499:23: warning: 'pi' may be used uninitialized [-Wmaybe-uninitialized] 499 | i = pi[ki]; \ | ^ packedMatrix.c:552:10: note: 'pi' was declared here 552 | int *pi, *pj; | ^~ make[4]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/CHOLMOD' ( cd Lib ; make clean ) make[5]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/CHOLMOD/Lib' make[5]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/CHOLMOD' make[4]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/COLAMD' ( cd Source ; make clean ) make[5]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/COLAMD/Source' make[5]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/COLAMD' make[4]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/AMD' ( cd Source ; make clean ) make[5]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/AMD/Source' make[5]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/AMD/Source' make[4]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/AMD' make[4]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/SuiteSparse_config' make[4]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/SuiteSparse_config' make[4]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/CHOLMOD' ( cd Lib ; make -f "/builddir/build/BUILD/R-4.2.1/etc/Makeconf" -f Makefile ) make[5]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/CHOLMOD/Lib' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_aat.c -o cholmod_aat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_add.c -o cholmod_add.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_band.c -o cholmod_band.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o In file included from ../Core/cholmod_change_factor.c:113: ../Core/t_cholmod_change_factor.c: In function 'r_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ In file included from ../Core/cholmod_change_factor.c:115: ../Core/t_cholmod_change_factor.c: In function 'c_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'simplicial_symbolic_to_super_symbolic': ../Core/cholmod_change_factor.c:262:17: warning: variable 'xsize' set but not used [-Wunused-but-set-variable] 262 | Int nsuper, xsize, ssize ; | ^~~~~ ../Core/cholmod_change_factor.c: In function 'change_simplicial_numeric': ../Core/cholmod_change_factor.c:677:15: warning: variable 'Li' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:677:10: warning: variable 'Lp' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:676:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c:676:13: warning: variable 'Lx' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'll_super_to_simplicial_numeric': ../Core/cholmod_change_factor.c:824:9: warning: variable 'n' set but not used [-Wunused-but-set-variable] 824 | Int n, lnz, s, nsuper, psi, psend, nsrow, nscol, k1, k2, erows ; | ^ ../Core/cholmod_change_factor.c:823:21: warning: variable 'Lpx' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~~ ../Core/cholmod_change_factor.c:823:10: warning: variable 'Ls' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_common.c -o cholmod_common.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_complex.c -o cholmod_complex.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_copy.c -o cholmod_copy.o ../Core/cholmod_copy.c: In function 'cholmod_copy': ../Core/cholmod_copy.c:275:25: warning: variable 'lo' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ ../Core/cholmod_copy.c:275:21: warning: variable 'up' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_dense.c -o cholmod_dense.o In file included from ../Core/cholmod_dense.c:45: ../Core/t_cholmod_dense.c: In function 'p_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ In file included from ../Core/cholmod_dense.c:47: ../Core/t_cholmod_dense.c: In function 'r_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ In file included from ../Core/cholmod_dense.c:49: ../Core/t_cholmod_dense.c: In function 'c_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/cholmod_dense.c: In function 'cholmod_eye': ../Core/cholmod_dense.c:300:15: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 300 | Int i, n, nz ; | ^~ ../Core/cholmod_dense.c:299:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 299 | double *Xx, *Xz ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_error.c -o cholmod_error.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_factor.c -o cholmod_factor.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_memory.c -o cholmod_memory.o ../Core/cholmod_memory.c: In function 'cholmod_malloc': ../Core/cholmod_memory.c:121:12: warning: unused variable 's' [-Wunused-variable] 121 | size_t s ; | ^ ../Core/cholmod_memory.c: In function 'cholmod_realloc': ../Core/cholmod_memory.c:311:12: warning: unused variable 's' [-Wunused-variable] 311 | size_t s ; | ^ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_sparse.c -o cholmod_sparse.o ../Core/cholmod_sparse.c: In function 'cholmod_copy_sparse': ../Core/cholmod_sparse.c:485:35: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 485 | Int p, pend, j, ncol, packed, nzmax, nz, xtype ; | ^~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_transpose.c -o cholmod_transpose.o In file included from ../Core/cholmod_transpose.c:121: ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:123: ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:125: ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:128: ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:130: ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ In file included from ../Core/cholmod_transpose.c:133: ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_triplet.c -o cholmod_triplet.o In file included from ../Core/cholmod_triplet.c:105: ../Core/t_cholmod_triplet.c: In function 'p_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:23: warning: variable 'Tx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:13: warning: variable 'Rx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:107: ../Core/t_cholmod_triplet.c: In function 'r_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:109: ../Core/t_cholmod_triplet.c: In function 'c_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/cholmod_triplet.c: In function 'cholmod_triplet_to_sparse': ../Core/cholmod_triplet.c:342:44: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 342 | Int i, j, p, k, stype, nrow, ncol, nz, ok ; | ^~ ../Core/cholmod_triplet.c:341:20: warning: variable 'Ri' set but not used [-Wunused-but-set-variable] 341 | Int *Wj, *Rp, *Ri, *Rnz, *Ti, *Tj ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Core/cholmod_version.c -o cholmod_version.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Check/cholmod_check.c -o cholmod_check.o ../Check/cholmod_check.c: In function 'check_common': ../Check/cholmod_check.c:204:61: warning: variable 'init_print' set but not used [-Wunused-but-set-variable] 204 | Int i, nrow, nmethods, ordering, xworksize, amd_backup, init_print ; | ^~~~~~~~~~ ../Check/cholmod_check.c: In function 'check_dense': ../Check/cholmod_check.c:950:37: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 950 | Int i, j, d, nrow, ncol, nzmax, nz, init_print, count, xtype ; | ^~ ../Check/cholmod_check.c: In function 'check_factor': ../Check/cholmod_check.c:1497:9: warning: variable 'ps2' set but not used [-Wunused-but-set-variable] 1497 | ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ; | ^~~ ../Check/cholmod_check.c:1495:16: warning: variable 'precise' set but not used [-Wunused-but-set-variable] 1495 | count, precise, init_print, ilast, lnz, head, tail, jprev, plast, | ^~~~~~~ ../Check/cholmod_check.c:1494:38: warning: variable 'ordering' set but not used [-Wunused-but-set-variable] 1494 | Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor, | ^~~~~~~~ ../Check/cholmod_check.c: In function 'check_factor.constprop': ../Check/cholmod_check.c:83:9: warning: 'psxend' may be used uninitialized [-Wmaybe-uninitialized] 83 | SuiteSparse_config.printf_func (format, arg) ; \ | ^~~~~~~~~~~~~~~~~~ ../Check/cholmod_check.c:1497:14: note: 'psxend' was declared here 1497 | ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ; | ^~~~~~ ../Check/cholmod_check.c:1496:62: warning: 'psx' may be used uninitialized [-Wmaybe-uninitialized] 1496 | jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol, | ^~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Check/cholmod_read.c -o cholmod_read.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Check/cholmod_write.c -o cholmod_write.o ../Check/cholmod_write.c: In function 'cholmod_write_sparse': ../Check/cholmod_write.c:366:33: warning: variable 'symmetry' set but not used [-Wunused-but-set-variable] 366 | Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype, | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o ../Cholesky/cholmod_analyze.c: In function 'cholmod_analyze_p2': ../Cholesky/cholmod_analyze.c:419:69: warning: variable 'ncol' set but not used [-Wunused-but-set-variable] 419 | Int k, n, ordering, method, nmethods, status, default_strategy, ncol, uncol, | ^~~~ ../Cholesky/cholmod_analyze.c:416:45: warning: variable 'CParent' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ ../Cholesky/cholmod_analyze.c:416:35: warning: variable 'Cmember' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o ../Cholesky/cholmod_factorize.c: In function 'cholmod_factorize_p': ../Cholesky/cholmod_factorize.c:111:37: warning: variable 'n' set but not used [-Wunused-but-set-variable] 111 | Int nrow, ncol, stype, convert, n, nsuper, grow2, status ; | ^ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o In file included from ../Cholesky/cholmod_rowfac.c:161: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:163: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:165: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ In file included from ../Cholesky/cholmod_rowfac.c:169: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:171: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:173: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o In file included from ../Cholesky/cholmod_solve.c:63: ../Cholesky/t_cholmod_solve.c: In function 'r_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ In file included from ../Cholesky/cholmod_solve.c:66: ../Cholesky/t_cholmod_solve.c: In function 'c_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ ../Cholesky/cholmod_solve.c: In function 'iperm': ../Cholesky/cholmod_solve.c:334:13: warning: variable 'nk' set but not used [-Wunused-but-set-variable] 334 | Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o In file included from ../MatrixOps/cholmod_sdmult.c:44: ../MatrixOps/t_cholmod_sdmult.c: In function 'r_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:46: ../MatrixOps/t_cholmod_sdmult.c: In function 'c_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:48: ../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Modify/cholmod_updown.c -o cholmod_updown.o ../Modify/cholmod_updown.c: In function 'cholmod_updown_mask2': ../Modify/cholmod_updown.c:433:40: warning: variable 'ps1' set but not used [-Wunused-but-set-variable] 433 | *Set_ps1 [32], *Set_ps2 [32], *ps1, *ps2 ; | ^~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o In file included from ../Supernodal/cholmod_super_numeric.c:82: ../Supernodal/t_cholmod_super_numeric.c: In function 'r_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:84: ../Supernodal/t_cholmod_super_numeric.c: In function 'c_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:86: ../Supernodal/t_cholmod_super_numeric.c: In function 'z_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o In file included from ../Supernodal/cholmod_super_solve.c:26: ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ In file included from ../Supernodal/cholmod_super_solve.c:28: ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o ../Supernodal/cholmod_super_symbolic.c: In function 'cholmod_super_symbolic2': ../Supernodal/cholmod_super_symbolic.c:562:21: warning: variable 'totsize' set but not used [-Wunused-but-set-variable] 562 | Int totsize ; | ^~~~~~~ ../Supernodal/cholmod_super_symbolic.c:185:12: warning: unused variable 'max_fraction' [-Wunused-variable] 185 | double max_fraction; | ^~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:184:17: warning: unused variable 'env_max_fraction' [-Wunused-variable] 184 | const char* env_max_fraction; | ^~~~~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:183:12: warning: unused variable 'max_bytes' [-Wunused-variable] 183 | size_t max_bytes; | ^~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:182:17: warning: unused variable 'env_max_bytes' [-Wunused-variable] 182 | const char* env_max_bytes; | ^~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:181:17: warning: unused variable 'env_use_gpu' [-Wunused-variable] 181 | const char* env_use_gpu; | ^~~~~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_aat.c -o cholmod_l_aat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_add.c -o cholmod_l_add.o ../Core/cholmod_add.c:34:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 34 | double alpha [2], /* scale factor for A */ | ~~~~~~~^~~~~~~~~ In file included from ../Core/cholmod_add.c:27: ../Include/cholmod_core.h:1582:68: note: previously declared as 'double *' 1582 | cholmod_sparse *cholmod_l_add (cholmod_sparse *, cholmod_sparse *, double *, | ^~~~~~~~ ../Core/cholmod_add.c:35:12: warning: argument 4 of type 'double[2]' with mismatched bound [-Warray-parameter=] 35 | double beta [2], /* scale factor for B */ | ~~~~~~~^~~~~~~~ ../Include/cholmod_core.h:1583:5: note: previously declared as 'double *' 1583 | double *, int, int, cholmod_common *) ; | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_band.c -o cholmod_l_band.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o In file included from ../Core/cholmod_change_factor.c:113: ../Core/t_cholmod_change_factor.c: In function 'r_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ In file included from ../Core/cholmod_change_factor.c:115: ../Core/t_cholmod_change_factor.c: In function 'c_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'simplicial_symbolic_to_super_symbolic': ../Core/cholmod_change_factor.c:262:17: warning: variable 'xsize' set but not used [-Wunused-but-set-variable] 262 | Int nsuper, xsize, ssize ; | ^~~~~ ../Core/cholmod_change_factor.c: In function 'change_simplicial_numeric': ../Core/cholmod_change_factor.c:677:15: warning: variable 'Li' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:677:10: warning: variable 'Lp' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:676:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c:676:13: warning: variable 'Lx' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'll_super_to_simplicial_numeric': ../Core/cholmod_change_factor.c:824:9: warning: variable 'n' set but not used [-Wunused-but-set-variable] 824 | Int n, lnz, s, nsuper, psi, psend, nsrow, nscol, k1, k2, erows ; | ^ ../Core/cholmod_change_factor.c:823:21: warning: variable 'Lpx' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~~ ../Core/cholmod_change_factor.c:823:10: warning: variable 'Ls' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_common.c -o cholmod_l_common.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_complex.c -o cholmod_l_complex.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_copy.c -o cholmod_l_copy.o ../Core/cholmod_copy.c: In function 'cholmod_l_copy': ../Core/cholmod_copy.c:275:25: warning: variable 'lo' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ ../Core/cholmod_copy.c:275:21: warning: variable 'up' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_dense.c -o cholmod_l_dense.o In file included from ../Core/cholmod_dense.c:45: ../Core/t_cholmod_dense.c: In function 'p_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ In file included from ../Core/cholmod_dense.c:47: ../Core/t_cholmod_dense.c: In function 'r_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ In file included from ../Core/cholmod_dense.c:49: ../Core/t_cholmod_dense.c: In function 'c_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/cholmod_dense.c: In function 'cholmod_l_eye': ../Core/cholmod_dense.c:300:15: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 300 | Int i, n, nz ; | ^~ ../Core/cholmod_dense.c:299:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 299 | double *Xx, *Xz ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_error.c -o cholmod_l_error.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_factor.c -o cholmod_l_factor.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_memory.c -o cholmod_l_memory.o ../Core/cholmod_memory.c: In function 'cholmod_l_malloc': ../Core/cholmod_memory.c:121:12: warning: unused variable 's' [-Wunused-variable] 121 | size_t s ; | ^ ../Core/cholmod_memory.c: In function 'cholmod_l_realloc': ../Core/cholmod_memory.c:311:12: warning: unused variable 's' [-Wunused-variable] 311 | size_t s ; | ^ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_sparse.c -o cholmod_l_sparse.o ../Core/cholmod_sparse.c: In function 'cholmod_l_copy_sparse': ../Core/cholmod_sparse.c:485:35: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 485 | Int p, pend, j, ncol, packed, nzmax, nz, xtype ; | ^~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_transpose.c -o cholmod_l_transpose.o In file included from ../Core/cholmod_transpose.c:121: ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:123: ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:125: ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:128: ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:130: ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ In file included from ../Core/cholmod_transpose.c:133: ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_triplet.c -o cholmod_l_triplet.o In file included from ../Core/cholmod_triplet.c:105: ../Core/t_cholmod_triplet.c: In function 'p_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:23: warning: variable 'Tx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:13: warning: variable 'Rx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:107: ../Core/t_cholmod_triplet.c: In function 'r_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:109: ../Core/t_cholmod_triplet.c: In function 'c_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/cholmod_triplet.c: In function 'cholmod_l_triplet_to_sparse': ../Core/cholmod_triplet.c:342:44: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 342 | Int i, j, p, k, stype, nrow, ncol, nz, ok ; | ^~ ../Core/cholmod_triplet.c:341:20: warning: variable 'Ri' set but not used [-Wunused-but-set-variable] 341 | Int *Wj, *Rp, *Ri, *Rnz, *Ti, *Tj ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Core/cholmod_version.c -o cholmod_l_version.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Check/cholmod_check.c -o cholmod_l_check.o ../Check/cholmod_check.c: In function 'check_common': ../Check/cholmod_check.c:204:61: warning: variable 'init_print' set but not used [-Wunused-but-set-variable] 204 | Int i, nrow, nmethods, ordering, xworksize, amd_backup, init_print ; | ^~~~~~~~~~ ../Check/cholmod_check.c: In function 'check_dense': ../Check/cholmod_check.c:950:37: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 950 | Int i, j, d, nrow, ncol, nzmax, nz, init_print, count, xtype ; | ^~ ../Check/cholmod_check.c: In function 'check_factor': ../Check/cholmod_check.c:1497:9: warning: variable 'ps2' set but not used [-Wunused-but-set-variable] 1497 | ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ; | ^~~ ../Check/cholmod_check.c:1495:16: warning: variable 'precise' set but not used [-Wunused-but-set-variable] 1495 | count, precise, init_print, ilast, lnz, head, tail, jprev, plast, | ^~~~~~~ ../Check/cholmod_check.c:1494:38: warning: variable 'ordering' set but not used [-Wunused-but-set-variable] 1494 | Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor, | ^~~~~~~~ ../Check/cholmod_check.c: In function 'check_factor.constprop': ../Check/cholmod_check.c:83:9: warning: 'psxend' may be used uninitialized [-Wmaybe-uninitialized] 83 | SuiteSparse_config.printf_func (format, arg) ; \ | ^~~~~~~~~~~~~~~~~~ ../Check/cholmod_check.c:1497:14: note: 'psxend' was declared here 1497 | ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ; | ^~~~~~ ../Check/cholmod_check.c:1496:62: warning: 'psx' may be used uninitialized [-Wmaybe-uninitialized] 1496 | jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol, | ^~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Check/cholmod_read.c -o cholmod_l_read.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Check/cholmod_write.c -o cholmod_l_write.o ../Check/cholmod_write.c: In function 'cholmod_l_write_sparse': ../Check/cholmod_write.c:366:33: warning: variable 'symmetry' set but not used [-Wunused-but-set-variable] 366 | Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype, | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o ../Cholesky/cholmod_analyze.c: In function 'cholmod_l_analyze_p2': ../Cholesky/cholmod_analyze.c:419:69: warning: variable 'ncol' set but not used [-Wunused-but-set-variable] 419 | Int k, n, ordering, method, nmethods, status, default_strategy, ncol, uncol, | ^~~~ ../Cholesky/cholmod_analyze.c:416:45: warning: variable 'CParent' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ ../Cholesky/cholmod_analyze.c:416:35: warning: variable 'Cmember' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o ../Cholesky/cholmod_factorize.c:101:12: warning: argument 2 of type 'double[2]' with mismatched bound [-Warray-parameter=] 101 | double beta [2], /* factorize beta*I+A or beta*I+A'*A */ | ~~~~~~~^~~~~~~~ In file included from ../Cholesky/cholmod_factorize.c:58: ../Include/cholmod_cholesky.h:168:46: note: previously declared as 'double *' 168 | int cholmod_l_factorize_p (cholmod_sparse *, double *, SuiteSparse_long *, | ^~~~~~~~ ../Cholesky/cholmod_factorize.c: In function 'cholmod_l_factorize_p': ../Cholesky/cholmod_factorize.c:111:37: warning: variable 'n' set but not used [-Wunused-but-set-variable] 111 | Int nrow, ncol, stype, convert, n, nsuper, grow2, status ; | ^ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o In file included from ../Cholesky/cholmod_rowfac.c:161: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:163: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:165: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ In file included from ../Cholesky/cholmod_rowfac.c:169: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:171: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:173: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/cholmod_rowfac.c: At top level: ../Cholesky/cholmod_rowfac.c:577:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 577 | double beta [2], /* factorize beta*I+A or beta*I+AA' */ | ~~~~~~~^~~~~~~~ In file included from ../Cholesky/cholmod_rowfac.c:103: ../Include/cholmod_cholesky.h:387:59: note: previously declared as 'double *' 387 | int cholmod_l_rowfac (cholmod_sparse *, cholmod_sparse *, double *, size_t, | ^~~~~~~~ ../Cholesky/cholmod_rowfac.c:602:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 602 | double beta [2], /* factorize beta*I+A or beta*I+AA' */ | ~~~~~~~^~~~~~~~ ../Include/cholmod_cholesky.h:413:64: note: previously declared as 'double *' 413 | int cholmod_l_rowfac_mask (cholmod_sparse *, cholmod_sparse *, double *, size_t, | ^~~~~~~~ ../Cholesky/cholmod_rowfac.c:629:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 629 | double beta [2], /* factorize beta*I+A or beta*I+AA' */ | ~~~~~~~^~~~~~~~ ../Include/cholmod_cholesky.h:434:65: note: previously declared as 'double *' 434 | int cholmod_l_rowfac_mask2 (cholmod_sparse *, cholmod_sparse *, double *, | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o In file included from ../Cholesky/cholmod_solve.c:63: ../Cholesky/t_cholmod_solve.c: In function 'r_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ In file included from ../Cholesky/cholmod_solve.c:66: ../Cholesky/t_cholmod_solve.c: In function 'c_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ ../Cholesky/cholmod_solve.c: In function 'iperm': ../Cholesky/cholmod_solve.c:334:13: warning: variable 'nk' set but not used [-Wunused-but-set-variable] 334 | Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ; | ^~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o In file included from ../MatrixOps/cholmod_sdmult.c:44: ../MatrixOps/t_cholmod_sdmult.c: In function 'r_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:46: ../MatrixOps/t_cholmod_sdmult.c: In function 'c_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:48: ../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/cholmod_sdmult.c: At top level: ../MatrixOps/cholmod_sdmult.c:59:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 59 | double alpha [2], /* scale factor for A */ | ~~~~~~~^~~~~~~~~ In file included from ../MatrixOps/cholmod_sdmult.c:36: ../Include/cholmod_matrixops.h:143:46: note: previously declared as 'double *' 143 | int cholmod_l_sdmult (cholmod_sparse *, int, double *, double *, | ^~~~~~~~ ../MatrixOps/cholmod_sdmult.c:60:12: warning: argument 4 of type 'double[2]' with mismatched bound [-Warray-parameter=] 60 | double beta [2], /* scale factor for Y */ | ~~~~~~~^~~~~~~~ ../Include/cholmod_matrixops.h:143:56: note: previously declared as 'double *' 143 | int cholmod_l_sdmult (cholmod_sparse *, int, double *, double *, | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o ../Modify/cholmod_rowadd.c:72:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 72 | double bk [2], /* kth entry of the right-hand-side b */ | ~~~~~~~^~~~~~ In file included from ../Modify/cholmod_rowadd.c:24: ../Include/cholmod_modify.h:215:55: note: previously declared as 'double *' 215 | int cholmod_l_rowadd_solve (size_t, cholmod_sparse *, double *, | ^~~~~~~~ ../Modify/cholmod_rowadd.c:116:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 116 | double bk [2], /* kth entry of the right hand side, b */ | ~~~~~~~^~~~~~ ../Include/cholmod_modify.h:241:54: note: previously declared as 'double *' 241 | int cholmod_l_rowadd_mark (size_t, cholmod_sparse *, double *, | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o ../Modify/cholmod_rowdel.c:72:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 72 | double yk [2], /* kth entry in the solution to A*y=b */ | ~~~~~~~^~~~~~ In file included from ../Modify/cholmod_rowdel.c:25: ../Include/cholmod_modify.h:294:55: note: previously declared as 'double *' 294 | int cholmod_l_rowdel_solve (size_t, cholmod_sparse *, double *, | ^~~~~~~~ ../Modify/cholmod_rowdel.c:104:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 104 | double yk [2], /* kth entry in the solution to A*y=b */ | ~~~~~~~^~~~~~ ../Include/cholmod_modify.h:320:54: note: previously declared as 'double *' 320 | int cholmod_l_rowdel_mark (size_t, cholmod_sparse *, double *, | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Modify/cholmod_updown.c -o cholmod_l_updown.o ../Modify/cholmod_updown.c: In function 'cholmod_l_updown_mask2': ../Modify/cholmod_updown.c:433:40: warning: variable 'ps1' set but not used [-Wunused-but-set-variable] 433 | *Set_ps1 [32], *Set_ps2 [32], *ps1, *ps2 ; | ^~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o In file included from ../Supernodal/cholmod_super_numeric.c:82: ../Supernodal/t_cholmod_super_numeric.c: In function 'r_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:84: ../Supernodal/t_cholmod_super_numeric.c: In function 'c_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:86: ../Supernodal/t_cholmod_super_numeric.c: In function 'z_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/cholmod_super_numeric.c: At top level: ../Supernodal/cholmod_super_numeric.c:102:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 102 | double beta [2], /* beta*I is added to diagonal of matrix to factorize */ | ~~~~~~~^~~~~~~~ In file included from ../Supernodal/cholmod_super_numeric.c:60: ../Include/cholmod_supernodal.h:120:66: note: previously declared as 'double *' 120 | int cholmod_l_super_numeric (cholmod_sparse *, cholmod_sparse *, double *, | ^~~~~~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o In file included from ../Supernodal/cholmod_super_solve.c:26: ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ In file included from ../Supernodal/cholmod_super_solve.c:28: ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DDLONG -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o ../Supernodal/cholmod_super_symbolic.c: In function 'cholmod_l_super_symbolic2': ../Supernodal/cholmod_super_symbolic.c:562:21: warning: variable 'totsize' set but not used [-Wunused-but-set-variable] 562 | Int totsize ; | ^~~~~~~ ../Supernodal/cholmod_super_symbolic.c:185:12: warning: unused variable 'max_fraction' [-Wunused-variable] 185 | double max_fraction; | ^~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:184:17: warning: unused variable 'env_max_fraction' [-Wunused-variable] 184 | const char* env_max_fraction; | ^~~~~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:183:12: warning: unused variable 'max_bytes' [-Wunused-variable] 183 | size_t max_bytes; | ^~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:182:17: warning: unused variable 'env_max_bytes' [-Wunused-variable] 182 | const char* env_max_bytes; | ^~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:181:17: warning: unused variable 'env_use_gpu' [-Wunused-variable] 181 | const char* env_use_gpu; | ^~~~~~~~~~~ ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o make[5]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/CHOLMOD' make[4]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/COLAMD' ( cd Source ; make -f "/builddir/build/BUILD/R-4.2.1/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/COLAMD/Source' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c colamd.c -o colamd.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c colamd.c -o colamd_l.o ar -rucs ../../COLAMD.a colamd.o colamd_l.o make[5]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/COLAMD' make[4]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/AMD' ( cd Source ; make -f "/builddir/build/BUILD/R-4.2.1/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/AMD/Source' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_1.c -o amd_i_1.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_1.c -o amd_l_1.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_2.c -o amd_i_2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_2.c -o amd_l_2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_order.c -o amd_i_order.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_order.c -o amd_l_order.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_control.c -o amd_i_control.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_control.c -o amd_l_control.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_info.c -o amd_i_info.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_info.c -o amd_l_info.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o make[5]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/AMD/Source' make[4]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/AMD' make[4]: Entering directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/SuiteSparse_config' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -DNTIMER -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c SuiteSparse_config.c -o SuiteSparse_config.o ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o make[4]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src/SuiteSparse_config' gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o packedMatrix.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -lflexiblas -lgfortran -lm -lquadmath -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/Rtmpk1QbEP/R.INSTALL39d478e3ebcc/Matrix/src' installing to /builddir/build/BUILD/R-4.2.1/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'chol2inv' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix' Creating a generic function for 'diag' from package 'base' in package 'Matrix' Creating a generic function for 'drop' from package 'base' in package 'Matrix' Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix' Creating a generic function for 'unname' from package 'base' in package 'Matrix' Creating a generic function for 'norm' from package 'base' in package 'Matrix' Creating a generic function for 'rcond' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'rcond' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dsparseMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"CsparseMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"CsparseMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"CsparseMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc" Creating a generic function for 'colSums' from package 'base' in package 'Matrix' Creating a generic function for 'colMeans' from package 'base' in package 'Matrix' Creating a generic function for 'rowSums' from package 'base' in package 'Matrix' Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix' in method for 'colSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'rowSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'colMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'rowMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix" Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix' Creating a generic function for 'diag<-' from package 'base' in package 'Matrix' Creating a generic function for 'crossprod' from package 'base' in package 'Matrix' Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix' Creating a generic function for 'which' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"graphAM","sparseMatrix"': no definition for class "graphAM" in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph" in method for 'coerce' with signature '"graphNEL","CsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"sparseMatrix","graph"': no definition for class "graph" in method for 'coerce' with signature '"sparseMatrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL" Creating a generic function for 'qr.R' from package 'base' in package 'Matrix' Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix' Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix' Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix' Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix' Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix' ** help *** installing help indices converting help for package 'Matrix' finding HTML links ... done BunchKaufman-methods html CAex html CHMfactor-class html Cholesky-class html Cholesky html CsparseMatrix-class html Diagonal html Hilbert html KNex html KhatriRao html LU-class html Matrix-class html Matrix html MatrixClass html MatrixFactorization-class html RsparseMatrix-class html Schur-class html Schur html SparseM-conv html Subassign-methods html TsparseMatrix-class html USCounties html Xtrct-methods html abIndex-class html abIseq html all-methods html all.equal-methods html atomicVector-class html band html bandSparse html bdiag html boolean-matprod html cBind html chol html chol2inv-methods html colSums html compMatrix-class html condest html dMatrix-class html ddenseMatrix-class html ddiMatrix-class html denseMatrix-class html dgCMatrix-class html dgRMatrix-class html dgTMatrix-class html dgeMatrix-class html diagU2N html diagonalMatrix-class html dmperm html dpoMatrix-class html drop0 html dsCMatrix-class html dsRMatrix-class html dsparseMatrix-class html dsyMatrix-class html dtCMatrix-class html dtRMatrix-class-def html dtpMatrix-class html dtrMatrix-class html expand html expm html externalFormats html facmul html forceSymmetric html formatSparseM html generalMatrix-class html graph2T html image-methods html indMatrix-class html index-class html invPerm html is.na-methods html is.null.DN html isSymmetric-methods html isTriangular html kronecker-methods html ldenseMatrix-class html ldiMatrix-class html lgeMatrix-class html lsparseMatrix-classes html lsyMatrix-class html ltrMatrix-class html lu html mat2triplet html matrix-products html nMatrix-class html ndenseMatrix-class html nearPD html ngeMatrix-class html nnzero html norm html nsparseMatrix-classes html nsyMatrix-class html ntrMatrix-class html number-class html pMatrix-class html packedMatrix-class html printSpMatrix html qr-methods html rankMatrix html rcond html rep2abI html replValue-class html rleDiff-class html rsparsematrix html solve-methods html spMatrix html sparse.model.matrix html sparseLU-class html sparseMatrix-class html sparseMatrix html sparseQR-class html sparseVector-class html sparseVector html symmetricMatrix-class html symmpart html triangularMatrix-class html uniqTsparse html unpack html unused-classes html updown html wrld_1deg html ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) Making 'packages.html' ... done begin installing recommended package nlme * installing *source* package 'nlme' ... ** package 'nlme' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmphEsa72/R.INSTALL3bde45101ba9/nlme/src' gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c chol.f -o chol.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c corStruct.c -o corStruct.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gnls.c -o gnls.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c matrix.c -o matrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c nlOptimizer.c -o nlOptimizer.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c nlme.c -o nlme.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c nlmefit.c -o nlmefit.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pdMat.c -o pdMat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pythag.c -o pythag.o gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c rs.f -o rs.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -lgfortran -lm -lquadmath -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmphEsa72/R.INSTALL3bde45101ba9/nlme/src' installing to /builddir/build/BUILD/R-4.2.1/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'nlme' finding HTML links ... done ACF html ACF.gls html ACF.lme html Alfalfa html Assay html BodyWeight html Cefamandole html Coef html Covariate html Covariate.varFunc html Dialyzer html Dim html Dim.corSpatial html Dim.corStruct html Dim.pdMat html Earthquake html Extract.pdMat html Fatigue html Gasoline html Glucose html Glucose2 html Gun html IGF html Initialize html Initialize.corStruct html Initialize.glsStruct html Initialize.lmeStruct html Initialize.reStruct html Initialize.varFunc html LDEsysMat html Machines html MathAchSchool html MathAchieve html Matrix html Matrix.pdMat html Matrix.reStruct html Meat html Milk html Muscle html Names html Names.formula html Names.pdBlocked html Names.pdMat html Names.reStruct html Nitrendipene html Oats html Orthodont html Ovary html Oxboys html Oxide html PBG html Phenobarb html Pixel html Quinidine html Rail html RatPupWeight html Relaxin html Remifentanil html Soybean html Spruce html Tetracycline1 html Tetracycline2 html VarCorr html Variogram html Variogram.corExp html Variogram.corGaus html Variogram.corLin html Variogram.corRatio html Variogram.corSpatial html Variogram.corSpher html Variogram.default html Variogram.gls html Variogram.lme html Wafer html Wheat html Wheat2 html allCoef html anova.gls html anova.lme html as.matrix.corStruct html as.matrix.pdMat html as.matrix.reStruct html asOneFormula html asTable html augPred html balancedGrouped html bdf html coef.corStruct html coef.gnls html coef.lmList html coef.lme html coef.modelStruct html coef.pdMat html coef.reStruct html coef.varFunc html collapse html collapse.groupedData html compareFits html comparePred html corAR1 html corARMA html corCAR1 html corClasses html corCompSymm html corExp html corFactor html corFactor.corStruct html corGaus html corLin html corMatrix html corMatrix.corStruct html corMatrix.pdMat html corMatrix.reStruct html corNatural html corRatio html corSpatial html corSpher html corSymm html ergoStool html fdHess html fitted.glsStruct html fitted.gnlsStruct html fitted.lmList html fitted.lme html fitted.lmeStruct html fitted.nlmeStruct html fixed.effects html fixef.lmList html formula.pdBlocked html formula.pdMat html formula.reStruct html gapply html getCovariate html getCovariate.corStruct html getCovariate.data.frame html getCovariate.varFunc html getCovariateFormula html getData html getData.gls html getData.lmList html getData.lme html getGroups html getGroups.corStruct html getGroups.data.frame html getGroups.gls html getGroups.lmList html getGroups.lme html getGroups.varFunc html getGroupsFormula html getResponse html getResponseFormula html getVarCov html gls-internal html gls html glsControl html glsObject html glsStruct html gnls html gnlsControl html gnlsObject html gnlsStruct html groupedData html gsummary html intervals html intervals.gls html intervals.lmList html intervals.lme html isBalanced html isInitialized html lmList html lmList.groupedData html lme html lme.groupedData html lme.lmList html lmeControl html lmeObject html lmeStruct html logDet html logDet.corStruct html logDet.pdMat html logDet.reStruct html logLik.corStruct html logLik.glsStruct html logLik.gnls html logLik.gnlsStruct html logLik.lmList html logLik.lme html logLik.lmeStruct html logLik.reStruct html logLik.varFunc html model.matrix.reStruct html needUpdate html needUpdate.modelStruct html nlme html nlme.nlsList html nlmeControl html nlmeObject html nlmeStruct html nlsList html nlsList.selfStart html pairs.compareFits html pairs.lmList html pairs.lme html pdBlocked html pdClasses html pdCompSymm html pdConstruct html pdConstruct.pdBlocked html pdDiag html pdFactor html pdFactor.reStruct html pdIdent html pdLogChol html pdMat html pdMatrix html pdMatrix.reStruct html pdNatural html pdSymm html phenoModel html plot.ACF html plot.Variogram html plot.augPred html plot.compareFits html plot.gls html plot.intervals.lmList html plot.lmList html plot.lme html plot.nffGroupedData html plot.nfnGroupedData html plot.nmGroupedData html plot.ranef.lmList html plot.ranef.lme html pooledSD html predict.gls html predict.gnls html predict.lmList html predict.lme html predict.nlme html print.summary.pdMat html print.varFunc html qqnorm.gls html qqnorm.lme html quinModel html random.effects html ranef.lmList html ranef.lme html reStruct html recalc html recalc.corStruct html recalc.modelStruct html recalc.reStruct html recalc.varFunc html residuals.gls html residuals.glsStruct html residuals.gnlsStruct html residuals.lmList html residuals.lme html residuals.lmeStruct html residuals.nlmeStruct html simulate.lme html solve.pdMat html solve.reStruct html splitFormula html summary.corStruct html summary.gls html summary.lmList html summary.lme html summary.modelStruct html summary.nlsList html summary.pdMat html summary.varFunc html update.modelStruct html update.varFunc html varClasses html varComb html varConstPower html varConstProp html varExp html varFixed html varFunc html varIdent html varPower html varWeights html varWeights.glsStruct html varWeights.lmeStruct html ** building package indices ** testing if installed package can be loaded * DONE (nlme) Making 'packages.html' ... done begin installing recommended package survival * installing *source* package 'survival' ... ** package 'survival' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpJE8yaF/R.INSTALL3c2535dfbf94/survival/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agexact.c -o agexact.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agfit4.c -o agfit4.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agfit5.c -o agfit5.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agmart.c -o agmart.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agmart3.c -o agmart3.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agscore2.c -o agscore2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agsurv3.c -o agsurv3.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agsurv4.c -o agsurv4.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c agsurv5.c -o agsurv5.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cdecomp.c -o cdecomp.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chinv2.c -o chinv2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chinv3.c -o chinv3.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cholesky2.c -o cholesky2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cholesky3.c -o cholesky3.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cholesky5.c -o cholesky5.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chsolve2.c -o chsolve2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chsolve3.c -o chsolve3.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chsolve5.c -o chsolve5.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c collapse.c -o collapse.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c concordance1.c -o concordance1.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c concordance3.c -o concordance3.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c concordance5.c -o concordance5.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cox_Rcallback.c -o cox_Rcallback.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxcount1.c -o coxcount1.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxdetail.c -o coxdetail.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxexact.c -o coxexact.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxfit5.c -o coxfit5.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxfit6.c -o coxfit6.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxmart.c -o coxmart.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxmart2.c -o coxmart2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxph_wtest.c -o coxph_wtest.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxsafe.c -o coxsafe.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxscho.c -o coxscho.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxscore2.c -o coxscore2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxsurv1.c -o coxsurv1.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxsurv2.c -o coxsurv2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dmatrix.c -o dmatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c doloop.c -o doloop.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c finegray.c -o finegray.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gchol.c -o gchol.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c multicheck.c -o multicheck.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c norisk.c -o norisk.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pyears1.c -o pyears1.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pyears2.c -o pyears2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pyears3b.c -o pyears3b.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pystep.c -o pystep.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survConcordance.c -o survConcordance.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survdiff2.c -o survdiff2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survfit4.c -o survfit4.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survfitci.c -o survfitci.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survfitkm.c -o survfitkm.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survfitresid.c -o survfitresid.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survpenal.c -o survpenal.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survreg6.c -o survreg6.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survreg7.c -o survreg7.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survregc1.c -o survregc1.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survregc2.c -o survregc2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c survsplit.c -o survsplit.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c tmerge.c -o tmerge.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c zph1.c -o zph1.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c zph2.c -o zph2.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart3.o agscore2.o agsurv3.o agsurv4.o agsurv5.o cdecomp.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o collapse.o concordance1.o concordance3.o concordance5.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore2.o coxsurv1.o coxsurv2.o dmatrix.o doloop.o finegray.o gchol.o init.o multicheck.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survfitkm.o survfitresid.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o zph1.o zph2.o -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpJE8yaF/R.INSTALL3c2535dfbf94/survival/src' installing to /builddir/build/BUILD/R-4.2.1/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'survival' finding HTML links ... done Surv html Surv2 html Surv2data html Survmethods html aareg html aeqSurv html aggregate.survfit html agreg.fit html aml html anova.coxph html attrassign html basehaz html bladder html blogit html cch html cgd html cgd0 html cipoisson html clogit html cluster html colon html concordance html concordancefit html cox.zph html coxph html coxph.control html coxph.detail html coxph.object html coxph.wtest html coxsurv.fit html diabetic html dsurvreg html finegray html flchain html frailty html gbsg html heart html is.ratetable html kidney html levels.Surv html lines.survfit html logLik.coxph html logan html lung html mgus html mgus2 html model.frame.coxph html model.matrix.coxph html myeloid html myeloma html nafld html neardate html nsk html nwtco html ovarian html pbc html pbcseq html plot.aareg html plot.cox.zph html plot.survfit html predict.coxph html predict.survreg html print.aareg html print.summary.coxph html print.summary.survexp html print.summary.survfit html print.survfit html pseudo html pspline html pyears html quantile.survfit html ratetable html ratetableDate html rats html rats2 html reliability html residuals.coxph html residuals.survfit html residuals.survreg html retinopathy html rhDNase html ridge html rotterdam html royston html rttright html solder html stanford2 html statefig html strata html summary.aareg html summary.coxph html summary.pyears html summary.survexp html summary.survfit html survSplit html survcheck html survdiff html survexp html survexp.fit html survexp.object html survexp.us html survfit html survfit.coxph html survfit.formula html survfit.matrix html survfit.object html survfit0 html survfitcoxph.fit html survival-deprecated html survival-internal html survobrien html survreg html survreg.control html survreg.distributions html survreg.object html survregDtest html tcut html tmerge html tobin html transplant html udca html untangle.specials html uspop2 html vcov.coxph html veteran html xtfrm.Surv html yates html yates_setup html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) Making 'packages.html' ... done begin installing recommended package boot * installing *source* package 'boot' ... ** package 'boot' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'boot' finding HTML links ... done EEF.profile html Imp.Estimates html abc.ci html acme html aids html aircondit html amis html aml html beaver html bigcity html boot-practicals html boot html boot.array html boot.ci html brambles html breslow html calcium html cane html capability html catsM html cav html cd4 html cd4.nested html censboot html channing html claridge html cloth html co.transfer html coal html control html corr html cum3 html cv.glm html darwin html dogs html downs.bc html ducks html empinf html envelope html exp.tilt html fir html freq.array html frets html glm.diag html glm.diag.plots html gravity html hirose html imp.weights html inv.logit html islay html jack.after.boot html k3.linear html linear.approx html lines.saddle.distn html logit html manaus html melanoma html motor html neuro html nitrofen html nodal html norm.ci html nuclear html paulsen html plot.boot html poisons html polar html print.boot html print.bootci html print.saddle.distn html print.simplex html remission html saddle html saddle.distn html saddle.distn.object html salinity html simplex html simplex.object html smooth.f html sunspot html survival html tau html tilt.boot html tsboot html tuna html urine html var.linear html wool html ** building package indices ** testing if installed package can be loaded * DONE (boot) Making 'packages.html' ... done begin installing recommended package cluster * installing *source* package 'cluster' ... ** package 'cluster' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpL7zp0w/R.INSTALL3d2615ea8f9b/cluster/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c clara.c -o clara.o gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c daisy.f -o daisy.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dysta.f -o dysta.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fanny.c -o fanny.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mona.c -o mona.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pam.c -o pam.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sildist.c -o sildist.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c spannel.c -o spannel.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c twins.c -o twins.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -lgfortran -lm -lquadmath -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpL7zp0w/R.INSTALL3d2615ea8f9b/cluster/src' installing to /builddir/build/BUILD/R-4.2.1/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'cluster' finding HTML links ... done agnes html agnes.object html agriculture html animals html bannerplot html chorSub html clara html clara.object html clusGap html clusplot.default html clusplot.partition html cluster-internal html coef.hclust html daisy html diana html dissimilarity.object html ellipsoidhull html fanny html fanny.object html flower html lower.to.upper.tri.inds html mona html mona.object html pam html pam.object html partition.object html plantTraits html plot.agnes html plot.diana html plot.mona html plot.partition html pltree html pluton html predict.ellipsoid html print.agnes html print.clara html print.diana html print.dissimilarity html print.fanny html print.mona html print.pam html ruspini html silhouette html sizeDiss html summary.agnes html summary.clara html summary.diana html summary.mona html summary.pam html twins.object html volume.ellipsoid html votes.repub html xclara html ** building package indices ** testing if installed package can be loaded * DONE (cluster) Making 'packages.html' ... done begin installing recommended package codetools * installing *source* package 'codetools' ... ** package 'codetools' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'codetools' finding HTML links ... done checkUsage html codetools html findGlobals html showTree html ** building package indices ** testing if installed package can be loaded * DONE (codetools) Making 'packages.html' ... done begin installing recommended package foreign * installing *source* package 'foreign' ... ** package 'foreign' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpMnsSSX/R.INSTALL3d8b6f2f0df4/foreign/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c R_systat.c -o R_systat.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Rdbfread.c -o Rdbfread.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c Rdbfwrite.c -o Rdbfwrite.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c SASxport.c -o SASxport.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c avl.c -o avl.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dbfopen.c -o dbfopen.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c file-handle.c -o file-handle.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c format.c -o format.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c minitab.c -o minitab.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pfm-read.c -o pfm-read.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sfm-read.c -o sfm-read.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c spss.c -o spss.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c stataread.c -o stataread.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpMnsSSX/R.INSTALL3d8b6f2f0df4/foreign/src' installing to /builddir/build/BUILD/R-4.2.1/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'foreign' finding HTML links ... done lookup.xport html read.S html read.arff html read.dbf html read.dta html read.epiinfo html read.mtp html read.octave html read.spss html read.ssd html read.systat html read.xport html write.arff html write.dbf html write.dta html write.foreign html ** building package indices ** testing if installed package can be loaded * DONE (foreign) Making 'packages.html' ... done begin installing recommended package KernSmooth * installing *source* package 'KernSmooth' ... ** package 'KernSmooth' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpohZGpT/R.INSTALL3ddb3ad0f267/KernSmooth/src' gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c blkest.f -o blkest.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c cp.f -o cp.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dgedi.f -o dgedi.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dgefa.f -o dgefa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c dgesl.f -o dgesl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c linbin.f -o linbin.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c linbin2D.f -o linbin2D.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c locpoly.f -o locpoly.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c rlbin.f -o rlbin.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c sdiag.f -o sdiag.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -m64 -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c sstdiag.f -o sstdiag.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -lflexiblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpohZGpT/R.INSTALL3ddb3ad0f267/KernSmooth/src' installing to /builddir/build/BUILD/R-4.2.1/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'KernSmooth' finding HTML links ... done bkde html bkde2D html bkfe html dpih html dpik html dpill html locpoly html ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) Making 'packages.html' ... done begin installing recommended package rpart * installing *source* package 'rpart' ... ** package 'rpart' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpMoQK7c/R.INSTALL3e2522b63204/rpart/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c anova.c -o anova.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c anovapred.c -o anovapred.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c branch.c -o branch.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bsplit.c -o bsplit.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c choose_surg.c -o choose_surg.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fix_cp.c -o fix_cp.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c free_tree.c -o free_tree.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gini.c -o gini.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c graycode.c -o graycode.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c insert_split.c -o insert_split.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c make_cp_list.c -o make_cp_list.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c make_cp_table.c -o make_cp_table.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mysort.c -o mysort.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c nodesplit.c -o nodesplit.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c partition.c -o partition.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c poisson.c -o poisson.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pred_rpart.c -o pred_rpart.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c print_tree.c -o print_tree.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpart.c -o rpart.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpart_callback.c -o rpart_callback.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpartexp.c -o rpartexp.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpartexp2.c -o rpartexp2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpcountup.c -o rpcountup.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpmatrix.c -o rpmatrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rundown.c -o rundown.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rundown2.c -o rundown2.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c surrogate.c -o surrogate.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c usersplit.c -o usersplit.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c xpred.c -o xpred.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c xval.c -o xval.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpMoQK7c/R.INSTALL3e2522b63204/rpart/src' installing to /builddir/build/BUILD/R-4.2.1/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'rpart' finding HTML links ... done car.test.frame html car90 html cu.summary html kyphosis html labels.rpart html meanvar.rpart html na.rpart html path.rpart html plot.rpart html plotcp html post.rpart html predict.rpart html print.rpart html printcp html prune.rpart html residuals.rpart html rpart-internal html rpart html rpart.control html rpart.exp html rpart.object html rsq.rpart html snip.rpart html solder.balance html stagec html summary.rpart html text.rpart html xpred.rpart html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) Making 'packages.html' ... done begin installing recommended package class * installing *source* package 'class' ... ** package 'class' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpBobvUj/R.INSTALL3ea82806d299/class/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c class.c -o class.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o class.so class.o -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpBobvUj/R.INSTALL3ea82806d299/class/src' installing to /builddir/build/BUILD/R-4.2.1/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'class' finding HTML links ... done SOM html batchSOM html condense html knn html knn.cv html knn1 html lvq1 html lvq2 html lvq3 html lvqinit html lvqtest html multiedit html olvq1 html reduce.nn html somgrid html ** building package indices ** testing if installed package can be loaded * DONE (class) Making 'packages.html' ... done begin installing recommended package nnet * installing *source* package 'nnet' ... ** package 'nnet' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/Rtmp4HnY7O/R.INSTALL3ed17f52010a/nnet/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c nnet.c -o nnet.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o nnet.so nnet.o -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/Rtmp4HnY7O/R.INSTALL3ed17f52010a/nnet/src' installing to /builddir/build/BUILD/R-4.2.1/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'nnet' finding HTML links ... done class.ind html multinom html nnet.Hess html nnet html predict.nnet html which.is.max html ** building package indices ** testing if installed package can be loaded * DONE (nnet) Making 'packages.html' ... done begin installing recommended package spatial * installing *source* package 'spatial' ... ** package 'spatial' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/Rtmp5m6k7B/R.INSTALL3efa37fd10ca/spatial/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c krc.c -o krc.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pps.c -o pps.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o spatial.so init.o krc.o pps.o -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/Rtmp5m6k7B/R.INSTALL3efa37fd10ca/spatial/src' installing to /builddir/build/BUILD/R-4.2.1/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'spatial' finding HTML links ... done Kaver html Kenvl html Kfn html Psim html SSI html Strauss html anova.trls html correlogram html expcov html ppgetregion html ppinit html pplik html ppregion html predict.trls html prmat html semat html surf.gls html surf.ls html trls.influence html trmat html variogram html ** building package indices ** testing if installed package can be loaded * DONE (spatial) Making 'packages.html' ... done begin installing recommended package mgcv * installing *source* package 'mgcv' ... ** package 'mgcv' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpVnoj15/R.INSTALL3f2978ef68c6/mgcv/src' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c coxph.c -o coxph.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c davies.c -o davies.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c discrete.c -o discrete.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gdi.c -o gdi.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c init.c -o init.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c magic.c -o magic.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mat.c -o mat.o mat.c: In function 'Rlanczos': mat.c:3624:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 3624 | for (i=0;i< *n+1;i++) if (q[i]) FREE(q[i]);FREE(q); | ^~~ In file included from mat.c:59: mgcv.h:62:14: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 62 | #define FREE R_chk_free | ^~~~~~~~~~ mat.c:3624:46: note: in expansion of macro 'FREE' 3624 | for (i=0;i< *n+1;i++) if (q[i]) FREE(q[i]);FREE(q); | ^~~~ gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c matrix.c -o matrix.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mgcv.c -o mgcv.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c misc.c -o misc.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mvn.c -o mvn.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qp.c -o qp.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c soap.c -o soap.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sparse-smooth.c -o sparse-smooth.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sparse.c -o sparse.o gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c tprs.c -o tprs.o gcc -m64 -shared -L/builddir/build/BUILD/R-4.2.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o mgcv.so coxph.o davies.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o qp.o soap.o sparse-smooth.o sparse.o tprs.o -lflexiblas -lgfortran -lm -lquadmath -fopenmp -L/builddir/build/BUILD/R-4.2.1/lib -lR make[3]: Leaving directory '/tmp/RtmpVnoj15/R.INSTALL3f2978ef68c6/mgcv/src' installing to /builddir/build/BUILD/R-4.2.1/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'mgcv' finding HTML links ... done Beta html FFdes html Predict.matrix html Predict.matrix.cr.smooth html Predict.matrix.soap.film html Rrank html Sl.initial.repara html Sl.repara html Sl.setup html Tweedie html XWXd html anova.gam html bam html bam.update html bandchol html blas.thread.test html bug.reports.mgcv html cSplineDes html chol.down html choose.k html columb html concurvity html coxph html coxpht html dDeta html exclude.too.far html extract.lme.cov html family.mgcv html fix.family.link html fixDependence html formXtViX html formula.gam html fs.test html full.score html gam html gam.check html gam.control html gam.convergence html gam.fit html gam.fit3 html gam.fit5.post.proc html gam.mh html gam.models html gam.outer html gam.reparam html gam.scale html gam.selection html gam.side html gam.vcomp html gam2objective html gamObject html gamSim html gamlss.etamu html gamlss.gH html gamm html gammals html gaulss html get.var html gevlss html ginla html gumbls html identifiability html in.out html inSide html influence.gam html initial.sp html interpret.gam html jagam html k.check html ldTweedie html ldetS html linear.functional.terms html logLik.gam html ls.size html magic html magic.post.proc html mgcv-FAQ html mgcv-package html mgcv-parallel html mini.roots html missing.data html model.matrix.gam html mono.con html mroot html multinom html mvn html negbin html new.name html notExp html notExp2 html null.space.dimension html ocat html one.se.rule html pcls html pdIdnot html pdTens html pen.edf html place.knots html plot.gam html polys.plot html predict.bam html predict.gam html print.gam html psum.chisq html qq.gam html rTweedie html random.effects html residuals.gam html rig html rmvn html s html scat html sdiag html shash html single.index html slanczos html smooth.construct html smooth.construct.ad.smooth.spec html smooth.construct.bs.smooth.spec html smooth.construct.cr.smooth.spec html smooth.construct.ds.smooth.spec html smooth.construct.fs.smooth.spec html smooth.construct.gp.smooth.spec html smooth.construct.mrf.smooth.spec html smooth.construct.ps.smooth.spec html smooth.construct.re.smooth.spec html smooth.construct.so.smooth.spec html smooth.construct.sos.smooth.spec html smooth.construct.t2.smooth.spec html smooth.construct.tensor.smooth.spec html smooth.construct.tp.smooth.spec html smooth.info html smooth.terms html smooth2random html smoothCon html sp.vcov html spasm.construct html step.gam html summary.gam html t2 html te html tensor.prod.model.matrix html totalPenaltySpace html trichol html trind.generator html twlss html uniquecombs html vcov.gam html vis.gam html ziP html ziplss html ** building package indices ** testing if installed package can be loaded * DONE (mgcv) Making 'packages.html' ... done make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/Recommended' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library/Recommended' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' building/updating vignettes for package 'grid' ... building/updating vignettes for package 'parallel' ... building/updating vignettes for package 'utils' ... building/updating vignettes for package 'stats' ... processing 'reshape.Rnw' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1' configuring Java ... Java interpreter : /usr/bin/java Java version : 17.0.4 Java home path : /usr/lib/jvm/java-17-openjdk-17.0.4.0.8-1.fc37.x86_64 Java compiler : not present Java headers gen.: Java archive tool: trying to compile and link a JNI program detected JNI cpp flags : detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm make[2]: Entering directory '/tmp/Rjavareconf.VM1TTY' gcc -m64 -I"/builddir/build/BUILD/R-4.2.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c conftest.c -o conftest.o conftest.c:1:10: fatal error: jni.h: No such file or directory 1 | #include | ^~~~~~~ compilation terminated. make[2]: *** [/builddir/build/BUILD/R-4.2.1/etc/Makeconf:168: conftest.o] Error 1 make[2]: Leaving directory '/tmp/Rjavareconf.VM1TTY' Unable to compile a JNI program JAVA_HOME : /usr/lib/jvm/java-17-openjdk-17.0.4.0.8-1.fc37.x86_64 Java library path: JNI cpp flags : JNI linker flags : Updating Java configuration in /builddir/build/BUILD/R-4.2.1 Done. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1' + cd src/nmath/standalone + make (cd ../../include; make Rmath.h) make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/include' make[1]: 'Rmath.h' is up to date. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/include' Copying source files make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/nmath/standalone' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/nmath/standalone' gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mlutils.c -o mlutils.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c d1mach.c -o d1mach.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c i1mach.c -o i1mach.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fmax2.c -o fmax2.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fmin2.c -o fmin2.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fprec.c -o fprec.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fround.c -o fround.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ftrunc.c -o ftrunc.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sign.c -o sign.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fsign.c -o fsign.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c imax2.c -o imax2.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c imin2.c -o imin2.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chebyshev.c -o chebyshev.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c log1p.c -o log1p.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lgammacor.c -o lgammacor.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gammalims.c -o gammalims.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c stirlerr.c -o stirlerr.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bd0.c -o bd0.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gamma.c -o gamma.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lgamma.c -o lgamma.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gamma_cody.c -o gamma_cody.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c beta.c -o beta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lbeta.c -o lbeta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c polygamma.c -o polygamma.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cospi.c -o cospi.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_i.c -o bessel_i.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_j.c -o bessel_j.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_k.c -o bessel_k.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_y.c -o bessel_y.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c choose.c -o choose.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c snorm.c -o snorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sexp.c -o sexp.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgamma.c -o dgamma.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pgamma.c -o pgamma.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qgamma.c -o qgamma.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rgamma.c -o rgamma.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dbeta.c -o dbeta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pbeta.c -o pbeta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qbeta.c -o qbeta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rbeta.c -o rbeta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dunif.c -o dunif.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c punif.c -o punif.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qunif.c -o qunif.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c runif.c -o runif.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnorm.c -o dnorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnorm.c -o pnorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnorm.c -o qnorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnorm.c -o rnorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dlnorm.c -o dlnorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plnorm.c -o plnorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qlnorm.c -o qlnorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rlnorm.c -o rlnorm.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c df.c -o df.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pf.c -o pf.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qf.c -o qf.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rf.c -o rf.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnf.c -o dnf.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dt.c -o dt.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pt.c -o pt.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qt.c -o qt.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rt.c -o rt.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnt.c -o dnt.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dchisq.c -o dchisq.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pchisq.c -o pchisq.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qchisq.c -o qchisq.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rchisq.c -o rchisq.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnchisq.c -o rnchisq.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dbinom.c -o dbinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pbinom.c -o pbinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qbinom.c -o qbinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rbinom.c -o rbinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rmultinom.c -o rmultinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dcauchy.c -o dcauchy.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pcauchy.c -o pcauchy.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qcauchy.c -o qcauchy.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rcauchy.c -o rcauchy.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dexp.c -o dexp.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pexp.c -o pexp.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qexp.c -o qexp.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rexp.c -o rexp.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgeom.c -o dgeom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pgeom.c -o pgeom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qgeom.c -o qgeom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rgeom.c -o rgeom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dhyper.c -o dhyper.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c phyper.c -o phyper.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qhyper.c -o qhyper.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rhyper.c -o rhyper.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnbinom.c -o dnbinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnbinom.c -o pnbinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbinom.c -o qnbinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbinom_mu.c -o qnbinom_mu.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnbinom.c -o rnbinom.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dpois.c -o dpois.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ppois.c -o ppois.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qpois.c -o qpois.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpois.c -o rpois.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dweibull.c -o dweibull.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pweibull.c -o pweibull.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qweibull.c -o qweibull.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rweibull.c -o rweibull.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dlogis.c -o dlogis.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plogis.c -o plogis.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qlogis.c -o qlogis.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rlogis.c -o rlogis.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnchisq.c -o dnchisq.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnchisq.c -o pnchisq.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnchisq.c -o qnchisq.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnbeta.c -o dnbeta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnbeta.c -o pnbeta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbeta.c -o qnbeta.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnf.c -o pnf.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnt.c -o pnt.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnf.c -o qnf.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnt.c -o qnt.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ptukey.c -o ptukey.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qtukey.c -o qtukey.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c toms708.c -o toms708.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c wilcox.c -o wilcox.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c signrank.c -o signrank.o gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c std_unif.c -o std_unif.o ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o ranlib libRmath.a make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/nmath/standalone' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/nmath/standalone' gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mlutils.c -o mlutils.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c d1mach.c -o d1mach.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c i1mach.c -o i1mach.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fmax2.c -o fmax2.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fmin2.c -o fmin2.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fprec.c -o fprec.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fround.c -o fround.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ftrunc.c -o ftrunc.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sign.c -o sign.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c fsign.c -o fsign.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c imax2.c -o imax2.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c imin2.c -o imin2.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chebyshev.c -o chebyshev.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c log1p.c -o log1p.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lgammacor.c -o lgammacor.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gammalims.c -o gammalims.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c stirlerr.c -o stirlerr.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bd0.c -o bd0.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gamma.c -o gamma.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lgamma.c -o lgamma.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c gamma_cody.c -o gamma_cody.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c beta.c -o beta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lbeta.c -o lbeta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c polygamma.c -o polygamma.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c cospi.c -o cospi.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_i.c -o bessel_i.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_j.c -o bessel_j.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_k.c -o bessel_k.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bessel_y.c -o bessel_y.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c choose.c -o choose.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c snorm.c -o snorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sexp.c -o sexp.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgamma.c -o dgamma.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pgamma.c -o pgamma.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qgamma.c -o qgamma.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rgamma.c -o rgamma.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dbeta.c -o dbeta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pbeta.c -o pbeta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qbeta.c -o qbeta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rbeta.c -o rbeta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dunif.c -o dunif.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c punif.c -o punif.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qunif.c -o qunif.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c runif.c -o runif.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnorm.c -o dnorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnorm.c -o pnorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnorm.c -o qnorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnorm.c -o rnorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dlnorm.c -o dlnorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plnorm.c -o plnorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qlnorm.c -o qlnorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rlnorm.c -o rlnorm.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c df.c -o df.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pf.c -o pf.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qf.c -o qf.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rf.c -o rf.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnf.c -o dnf.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dt.c -o dt.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pt.c -o pt.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qt.c -o qt.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rt.c -o rt.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnt.c -o dnt.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dchisq.c -o dchisq.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pchisq.c -o pchisq.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qchisq.c -o qchisq.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rchisq.c -o rchisq.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnchisq.c -o rnchisq.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dbinom.c -o dbinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pbinom.c -o pbinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qbinom.c -o qbinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rbinom.c -o rbinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rmultinom.c -o rmultinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dcauchy.c -o dcauchy.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pcauchy.c -o pcauchy.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qcauchy.c -o qcauchy.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rcauchy.c -o rcauchy.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dexp.c -o dexp.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pexp.c -o pexp.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qexp.c -o qexp.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rexp.c -o rexp.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dgeom.c -o dgeom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pgeom.c -o pgeom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qgeom.c -o qgeom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rgeom.c -o rgeom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dhyper.c -o dhyper.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c phyper.c -o phyper.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qhyper.c -o qhyper.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rhyper.c -o rhyper.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnbinom.c -o dnbinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnbinom.c -o pnbinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbinom.c -o qnbinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbinom_mu.c -o qnbinom_mu.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rnbinom.c -o rnbinom.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dpois.c -o dpois.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ppois.c -o ppois.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qpois.c -o qpois.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rpois.c -o rpois.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dweibull.c -o dweibull.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pweibull.c -o pweibull.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qweibull.c -o qweibull.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rweibull.c -o rweibull.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dlogis.c -o dlogis.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c plogis.c -o plogis.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qlogis.c -o qlogis.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c rlogis.c -o rlogis.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnchisq.c -o dnchisq.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnchisq.c -o pnchisq.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnchisq.c -o qnchisq.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c dnbeta.c -o dnbeta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnbeta.c -o pnbeta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnbeta.c -o qnbeta.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnf.c -o pnf.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pnt.c -o pnt.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnf.c -o qnf.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qnt.c -o qnt.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c ptukey.c -o ptukey.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c qtukey.c -o qtukey.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c toms708.c -o toms708.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c wilcox.c -o wilcox.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c signrank.c -o signrank.lo gcc -m64 -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c std_unif.c -o std_unif.lo gcc -m64 -shared -fopenmp -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libRmath.so mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo qnbinom_mu.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/nmath/standalone' + make pdf make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/manual' creating doc/manual/version.tex collecting LaTeX docs for package 'base' ... Converting parsed Rd's to LaTeX ........................................... collecting LaTeX docs for package 'tools' ... Converting parsed Rd's to LaTeX ...... collecting LaTeX docs for package 'utils' ... Converting parsed Rd's to LaTeX ............... collecting LaTeX docs for package 'grDevices' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'graphics' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'stats' ... Converting parsed Rd's to LaTeX ............................... collecting LaTeX docs for package 'datasets' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'methods' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'grid' ... Converting parsed Rd's to LaTeX .......... collecting LaTeX docs for package 'splines' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'stats4' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'tcltk' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'compiler' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'parallel' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'MASS' ... Converting parsed Rd's to LaTeX ............... collecting LaTeX docs for package 'lattice' ... Converting parsed Rd's to LaTeX ...... collecting LaTeX docs for package 'Matrix' ... Converting parsed Rd's to LaTeX ............ collecting LaTeX docs for package 'nlme' ... Converting parsed Rd's to LaTeX ............................ collecting LaTeX docs for package 'survival' ... Converting parsed Rd's to LaTeX ............ collecting LaTeX docs for package 'boot' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'cluster' ... Converting parsed Rd's to LaTeX ..... collecting LaTeX docs for package 'codetools' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'foreign' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'KernSmooth' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'rpart' ... Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'class' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'nnet' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'spatial' ... Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'mgcv' ... Converting parsed Rd's to LaTeX ............... PDF/LaTeX documentation: full reference index ... This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./fullrefman.tex LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-05-07> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2020/04/10 v1.4m Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (../../share/texmf/tex/latex/Rd.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/zi4.sty `inconsolata-zi4' v1.12, 2019/05/17 Text macros for Inconsolata (msharpe) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex))))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref-langpatches.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 388. 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(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/usr/share/texliv e/texmf-var/fonts/map/pdftex/updmap/pdftex.map}] [1] [2] (./base-pkg.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) [3] [4] Underfull \hbox (badness 6252) in paragraph at lines 143--151 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 143--151 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [5] [6] [7] Underfull \hbox (badness 1178) in paragraph at lines 328--331 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [8] [9] [10] Underfull \hbox (badness 2556) in paragraph at lines 567--573 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [11] [12] [13] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [14] [15] [16] [17] [18] [19] [20] [21] [22] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [23] [24] [25] Underfull \hbox (badness 10000) in paragraph at lines 1578--1584 [26] [27] [28] [29] [30] [31] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2056--2056 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] Underfull \hbox (badness 1721) in paragraph at lines 2720--2724 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] Underfull \vbox (badness 10000) has occurred while \output is active [52] [53] [54] [55] [56] [57] [58] Underfull \hbox (badness 10000) in paragraph at lines 3901--3903 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] Underfull \hbox (badness 2521) in paragraph at lines 5196--5198 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6387--6387 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] Underfull \hbox (badness 1303) in paragraph at lines 7281--7288 []\T1/zi4/m/n/10 file []\T1/ptm/m/n/10 can be used with []\T1/zi4/m/n/10 descri ption = "clipboard" []\T1/ptm/m/n/10 in mode []\T1/zi4/m/n/10 "r" []\T1/ptm/m/n /10 only. This reads the Underfull \hbox (badness 2111) in paragraph at lines 7292--7297 []\T1/ptm/m/n/10 Unix users wish-ing to \T1/ptm/m/it/10 write \T1/ptm/m/n/10 to one of the X11 se-lec-tions may be able to do so via [106] [107] Underfull \vbox (badness 10000) has occurred while \output is active [108] [109] [110] [111] [112] [113] [114] [115] Underfull \hbox (badness 2096) in paragraph at lines 7962--7966 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [116] Underfull \hbox (badness 2351) in paragraph at lines 8076--8079 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [117] [118] [119] [120] [121] Underfull \hbox (badness 4479) in paragraph at lines 8393--8404 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [122] [123] [124] [125] [126] [127] Underfull \hbox (badness 1629) in paragraph at lines 8845--8857 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 8845--8857 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] Underfull \hbox (badness 1178) in paragraph at lines 9596--9600 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] Underfull \hbox (badness 2744) in paragraph at lines 11903--11905 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] Underfull \hbox (badness 2253) in paragraph at lines 14099--14101 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [201] Underfull \hbox (badness 1565) in paragraph at lines 14175--14179 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [202] Underfull \hbox (badness 4927) in paragraph at lines 14219--14221 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [203] [204] Underfull \hbox (badness 3148) in paragraph at lines 14321--14326 [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.fi les[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 help[][][][]\T1/ptm/m/n/10 ; [ ][][]\T1/zi4/m/n/10 RShowDoc[][][] []\T1/ptm/m/n/10 call []\T1/zi4/m/n/10 file. show() []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 type = "text"[]\T1/ptm/m/n/10 . Co n-sider Underfull \hbox (badness 1466) in paragraph at lines 14368--14371 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [205] Underfull \vbox (badness 1418) has occurred while \output is active [206] Underfull \hbox (badness 10000) in paragraph at lines 14499--14503 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14510--14513 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [207] [208] [209] [210] Underfull \hbox (badness 3965) in paragraph at lines 14807--14811 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] Underfull \hbox (badness 4429) in paragraph at lines 15588--15591 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [223] Underfull \hbox (badness 10000) in paragraph at lines 15694--15696 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [224] Underfull \hbox (badness 2035) in paragraph at lines 15767--15771 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [225] [226] [227] [228] [229] [230] [231] [232] [233] Underfull \hbox (badness 2452) in paragraph at lines 16379--16383 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16379--16383 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [234] [235] [236] Underfull \hbox (badness 1092) in paragraph at lines 16552--16557 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [237] [238] [239] Underfull \hbox (badness 6741) in paragraph at lines 16805--16809 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [240] [241] [242] Underfull \vbox (badness 10000) has occurred while \output is active [243] [244] [245] [246] [247] [248] [249] Underfull \vbox (badness 10000) has occurred while \output is active [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] Underfull \hbox (badness 1478) in paragraph at lines 18257--18260 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [260] [261] [262] [263] Underfull \hbox (badness 10000) in paragraph at lines 18529--18531 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 18535--18544 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [264] [265] [266] [267] [268] [269] [270] [271] Underfull \hbox (badness 1442) in paragraph at lines 19143--19145 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [272] [273] [274] [275] [276] Underfull \hbox (badness 10000) in paragraph at lines 19474--19480 [277] [278] [279] Underfull \hbox (badness 1248) in paragraph at lines 19719--19722 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [280] [281] [282] [283] [284] Underfull \hbox (badness 4739) in paragraph at lines 19982--19984 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [285] [286] [287] Underfull \hbox (badness 1603) in paragraph at lines 20209--20212 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [288] [289] [290] [291] [292] [293] [294] [295] [296] [297] [298] [299] [300] Underfull \hbox (badness 2469) in paragraph at lines 21066--21071 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [301] Underfull \hbox (badness 1675) in paragraph at lines 21154--21163 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21164--21179 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [302] Underfull \hbox (badness 10000) in paragraph at lines 21214--21217 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21214--21217 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [303] [304] Underfull \hbox (badness 1014) in paragraph at lines 21348--21353 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [305] [306] [307] [308] [309] [310] [311] [312] [313] [314] [315] [316] Underfull \hbox (badness 1264) in paragraph at lines 22197--22205 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [317] Underfull \hbox (badness 4441) in paragraph at lines 22231--22234 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [318] [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] Underfull \hbox (badness 5231) in paragraph at lines 23028--23030 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] [341] [342] [343] [344] Underfull \hbox (badness 10000) in paragraph at lines 24121--24127 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24121--24127 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [345] [346] [347] [348] [349] [350] [351] Underfull \hbox (badness 2790) in paragraph at lines 24618--24621 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 24618--24621 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [352] [353] [354] [355] [356] Underfull \hbox (badness 1194) in paragraph at lines 24941--24944 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [357] [358] [359] Underfull \hbox (badness 2368) in paragraph at lines 25148--25154 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [360] [361] [362] [363] [364] Underfull \hbox (badness 10000) in paragraph at lines 25538--25541 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [365] [366] [367] [368] [369] [370] [371] [372] [373] Underfull \hbox (badness 10000) in paragraph at lines 26159--26161 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] Underfull \hbox (badness 1881) in paragraph at lines 27054--27057 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27078--27080 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [387] [388] Underfull \hbox (badness 2142) in paragraph at lines 27219--27223 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27276--27281 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [389] [390] [391] Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by [392] Underfull \hbox (badness 10000) in paragraph at lines 27583--27586 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 27609--27611 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 27651--27656 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 27657--27668 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 27657--27668 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 27669--27672 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [393] [394] [395] [396] [397] Underfull \vbox (badness 10000) has occurred while \output is active [398] Underfull \hbox (badness 10000) in paragraph at lines 28069--28073 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [399] [400] Underfull \hbox (badness 10000) in paragraph at lines 28216--28219 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [401] Underfull \hbox (badness 7925) in paragraph at lines 28297--28301 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28297--28301 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28302--28311 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [402] [403] [404] [405] [406] [407] [408] [409] [410] [411] [412] [413] [414] [415] Underfull \hbox (badness 2726) in paragraph at lines 29298--29301 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [416] [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] Underfull \hbox (badness 1603) in paragraph at lines 30048--30051 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [428] [429] [430] [431] [432] [433] Underfull \vbox (badness 10000) has occurred while \output is active [434] [435] [436] [437] [438] [439] [440] [441] Underfull \hbox (badness 1533) in paragraph at lines 31085--31088 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [442] [443] Underfull \hbox (badness 1163) in paragraph at lines 31248--31259 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [444] [445] [446] [447] [448] [449] [450] [451] [452] [453] [454] Underfull \vbox (badness 10000) has occurred while \output is active [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] Underfull \hbox (badness 10000) in paragraph at lines 32911--32915 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 32911--32915 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. [468] Underfull \hbox (badness 3557) in paragraph at lines 32932--32934 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 32935--32939 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [469] [470] [471] [472] [473] [474] [475] [476] Underfull \hbox (badness 1655) in paragraph at lines 33529--33531 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [477] [478] [479] [480] [481] [482] [483] [484] [485] [486] [487] [488] [489] [490] [491] [492] [493] [494] Underfull \hbox (badness 2261) in paragraph at lines 34735--34740 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] Underfull \hbox (badness 10000) in paragraph at lines 35855--35866 \T1/zi4/m/n/10 / / docs . microsoft . com / en-[]us / cpp / c-[]language / pars ing-[]c-[]command-[]line-[]arguments ? [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] Underfull \hbox (badness 10000) in paragraph at lines 37386--37388 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [532] [533] [534] [535] [536] [537] Underfull \hbox (badness 2913) in paragraph at lines 37806--37810 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [538] [539] [540] Underfull \hbox (badness 1072) in paragraph at lines 38052--38056 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38057--38061 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [541] Underfull \hbox (badness 10000) in paragraph at lines 38097--38103 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38097--38103 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38097--38103 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38112--38119 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [542] [543] [544] Underfull \hbox (badness 2644) in paragraph at lines 38347--38351 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [545] [546] Underfull \hbox (badness 1142) in paragraph at lines 38500--38506 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [547] [548] [549] [550] [551] [552] [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] Underfull \hbox (badness 1158) in paragraph at lines 39801--39803 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [566] [567] [568] [569] [570] [571] [572] [573] [574] Underfull \hbox (badness 1137) in paragraph at lines 40391--40397 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails [575] Underfull \hbox (badness 4967) in paragraph at lines 40410--40415 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [576] Underfull \hbox (badness 1616) in paragraph at lines 40530--40535 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [577] [578] [579] [580] [581] [582] [583] [584] [585] Underfull \hbox (badness 1472) in paragraph at lines 41077--41080 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [586] [587] [588] [589] [590] [591] [592] [593] [594] [595] [596] [597] [598] Underfull \hbox (badness 10000) in paragraph at lines 42003--42007 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [599] [600] [601] [602] Underfull \hbox (badness 10000) in paragraph at lines 42254--42257 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [603] [604] [605] Underfull \hbox (badness 10000) in paragraph at lines 42438--42442 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [606] [607] [608] [609] [610] [611] [612] [613] Underfull \hbox (badness 10000) in paragraph at lines 43064--43067 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [614] [615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626] Underfull \hbox (badness 1990) in paragraph at lines 43986--43994 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 43986--43994 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [627] [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638] [639] [640] Underfull \hbox (badness 2452) in paragraph at lines 44955--44961 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [641] [642] [643] [644] [645] [646] Underfull \hbox (badness 3668) in paragraph at lines 45353--45355 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [647] Underfull \hbox (badness 2401) in paragraph at lines 45483--45487 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [648] [649] [650] [651] Underfull \hbox (badness 2111) in paragraph at lines 45691--45696 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [652] [653] [654] Underfull \hbox (badness 4001) in paragraph at lines 45937--45939 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [655] [656] [657] [658] [659] Underfull \hbox (badness 5417) in paragraph at lines 46302--46306 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [660] Underfull \hbox (badness 10000) in paragraph at lines 46363--46367 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [661]) (./compiler-pkg.tex [662] Chapter 2. [663] [664] [665] [666]) (./datasets-pkg.tex Chapter 3. [667] [668] [669] [670] [671] [672] Underfull \vbox (badness 1472) has occurred while \output is active [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Overfull \vbox (4.26088pt too high) has occurred while \output is active [704] [705] [706] [707] [708] [709] Overfull \vbox (13.87083pt too high) has occurred while \output is active [710] Underfull \vbox (badness 2376) has occurred while \output is active [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] Overfull \vbox (10.49593pt too high) has occurred while \output is active [727] Overfull \vbox (15.49593pt too high) has occurred while \output is active [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742]) (./grDevices-pkg.tex Chapter 4. [743] [744] [745] [746] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [747] [748] [749] [750] [751] [752] [753] [754] [755] Underfull \hbox (badness 1424) in paragraph at lines 898--900 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [756] [757] [758] [759] [760] Underfull \hbox (badness 5175) in paragraph at lines 1192--1194 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [761] [762] Underfull \hbox (badness 2512) in paragraph at lines 1311--1313 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [763] [764] [765] [766] Underfull \hbox (badness 1490) in paragraph at lines 1611--1616 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1624--1628 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [767] [768] [769] [770] [771] [772] Underfull \hbox (badness 1325) in paragraph at lines 2038--2048 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [773] [774] Underfull \hbox (badness 10000) in paragraph at lines 2150--2152 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [775] [776] Underfull \hbox (badness 6758) in paragraph at lines 2329--2332 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [777] [778] [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] [782] [783] [784] [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2940--2941 Underfull \vbox (badness 10000) has occurred while \output is active [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] Underfull \vbox (badness 10000) has occurred while \output is active [802] Underfull \hbox (badness 10000) in paragraph at lines 4016--4019 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] Underfull \vbox (badness 10000) has occurred while \output is active [814] [815] Underfull \hbox (badness 1584) in paragraph at lines 4907--4909 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 4911--4918 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [816] [817] [818] [819] Underfull \hbox (badness 1377) in paragraph at lines 5217--5222 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [820] Underfull \hbox (badness 1418) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5311--5313 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [821] Underfull \hbox (badness 1377) in paragraph at lines 5422--5427 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [822] Underfull \hbox (badness 7344) in paragraph at lines 5491--5493 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [823] [824] Underfull \hbox (badness 2035) in paragraph at lines 5629--5638 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5629--5638 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5629--5638 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [825] Underfull \hbox (badness 10000) in paragraph at lines 5697--5699 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / Underfull \vbox (badness 10000) has occurred while \output is active [826] [827] [828] Underfull \hbox (badness 1546) in paragraph at lines 5841--5849 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] [836] Underfull \hbox (badness 10000) in paragraph at lines 6379--6382 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [837] [838] [839] [840] [841] [842] [843] [844] [845] [846] [847] [848] Underfull \hbox (badness 1189) in paragraph at lines 7208--7210 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [849] Underfull \hbox (badness 10000) in paragraph at lines 7313--7315 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [850] [851] [852] [853] [854] Underfull \hbox (badness 3780) in paragraph at lines 7627--7633 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [855] [856] [857] [858] [859]) (./graphics-pkg.tex [860] Chapter 5. [861] [862] [863] [864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875] Overfull \hbox (12.71341pt too wide) in paragraph at lines 983--983 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [876] [877] [878] [879] [880] [881] Underfull \hbox (badness 4634) in paragraph at lines 1357--1360 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [882] [883] [884] [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] Underfull \hbox (badness 1728) in paragraph at lines 2335--2337 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [897] Underfull \hbox (badness 1009) in paragraph at lines 2428--2435 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] Underfull \vbox (badness 10000) has occurred while \output is active [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] Underfull \hbox (badness 3229) in paragraph at lines 4652--4657 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [932] [933] [934] [935] [936] Underfull \hbox (badness 1107) in paragraph at lines 5081--5087 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [937] Underfull \hbox (badness 10000) in paragraph at lines 5210--5213 [938] Underfull \hbox (badness 10000) in paragraph at lines 5271--5273 [939 ] [940 ] [941] [942] [943] [944] [945] [946] [947] [948]pdfTeX warning (ext4): destinati on with the same identifier (name{Rfn.plot}) has been already used, duplicate i gnored \relax l.5943 \aliasA{plot}{plot.default}{plot} [949] [950] [951] [952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6848--6849 [][] [963 ] [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] Underfull \hbox (badness 4954) in paragraph at lines 8936--8938 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 8938--8940 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [995]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.unit s}) has been already used, duplicate ignored \relax l.9018 \HeaderA{units}{Graphical Units}{units} [996] [997] [998] [999]) (./grid-pkg.tex [1000] Chapter 6. [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1019] Underfull \vbox (badness 10000) has occurred while \output is active [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) in paragraph at lines 3041--3043 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] Underfull \vbox (badness 10000) has occurred while \output is active [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] Underfull \hbox (badness 1067) in paragraph at lines 4761--4764 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1075] [1076] [1077] [1078] [1079] [1080] Underfull \hbox (badness 7256) in paragraph at lines 5112--5114 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \hbox (badness 2142) in paragraph at lines 5561--5565 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1088] Underfull \hbox (badness 4699) in paragraph at lines 5632--5637 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118]) (./methods-pkg.tex Chapter 7. [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] Underfull \vbox (badness 10000) has occurred while \output is active [1127] Underfull \vbox (badness 10000) has occurred while \output is active [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1145] [1146] [1147] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1153] [1154] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1155] [1156] [1157] [1158] [1159] [1160] [1161] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1162] [1163] [1164] [1165] [1166] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1169] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1178] [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] Underfull \vbox (badness 10000) has occurred while \output is active [1187] Underfull \vbox (badness 10000) has occurred while \output is active [1188] [1189] [1190] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1191] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1192] [1193] [1194] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1203] [1204] [1205] [1206] Underfull \vbox (badness 10000) has occurred while \output is active [1207] [1208] [1209]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1210] [1211] [1212]pdfTeX warning (ext4): desti nation with the same identifier (name{Rfn.Complex}) has been already used, dupl icate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destinat ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) has been already used, duplicate igno red \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination wi th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor ed \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1213] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1214] [1215] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1256] [1257] [1258]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1259] [1260] [1261] [1262] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] Underfull \hbox (badness 3386) in paragraph at lines 1402--1405 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1279] [1280] [1281]) (./splines-pkg.tex [1282] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] [1295] [1296]) (./stats-pkg.tex Chapter 10. [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] Underfull \hbox (badness 1412) in paragraph at lines 887--889 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1310] [1311] [1312] [1313] [1314] [1315] [1316] Underfull \hbox (badness 2503) in paragraph at lines 1369--1372 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] Underfull \hbox (badness 2503) in paragraph at lines 3530--3533 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] Underfull \hbox (badness 3989) in paragraph at lines 4787--4794 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2556) in paragraph at lines 5424--5427 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1377] [1378] [1379] [1380] [1381] [1382] Underfull \hbox (badness 2503) in paragraph at lines 5838--5842 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] Underfull \hbox (badness 7081) in paragraph at lines 6632--6635 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6636--6638 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1395] Underfull \vbox (badness 10000) has occurred while \output is active [1396] [1397] [1398] [1399] Underfull \vbox (badness 10000) has occurred while \output is active [1400] [1401] [1402] [1403] [1404] [1405] [1406] Underfull \hbox (badness 10000) in paragraph at lines 7493--7496 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428] [1429] [1430] [1431] Underfull \hbox (badness 2626) in paragraph at lines 9172--9175 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1432] [1433] Underfull \hbox (badness 2503) in paragraph at lines 9279--9283 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1434] [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] Underfull \hbox (badness 4518) in paragraph at lines 10631--10636 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1453] [1454] [1455] [1456] [1457] Underfull \hbox (badness 2142) in paragraph at lines 10992--10995 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11011--11014 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1458] Underfull \hbox (badness 1708) in paragraph at lines 11073--11077 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1459] [1460] [1461] [1462] [1463] Underfull \hbox (badness 1694) in paragraph at lines 11469--11472 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471]pdfTeX warning (ext4): d estination with the same identifier (name{Rfn.hat}) has been already used, dupl icate ignored \relax l.11950 \aliasA{hat}{influence.measures}{hat} [1472] [1473] Underfull \hbox (badness 1484) in paragraph at lines 12092--12094 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] Underfull \hbox (badness 10000) in paragraph at lines 12694--12696 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1483] [1484] [1485] [1486] [1487] Underfull \hbox (badness 2894) in paragraph at lines 13030--13034 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1488] [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 1496) in paragraph at lines 13444--13450 []\T1/ptm/m/n/10 Gunar Schröer and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1494] [1495] [1496] [1497] [1498] [1499] Underfull \hbox (badness 4518) in paragraph at lines 13842--13847 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] Underfull \hbox (badness 4518) in paragraph at lines 14503--14508 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1510] [1511] Underfull \hbox (badness 6412) in paragraph at lines 14641--14645 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14648--14650 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1512] [1513] [1514] [1515] [1516] [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] Underfull \hbox (badness 2503) in paragraph at lines 15724--15728 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1528] [1529] [1530] [1531] [1532] [1533] [1534] [1535] Underfull \hbox (badness 10000) in paragraph at lines 16237--16243 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16237--16243 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] Underfull \hbox (badness 1158) in paragraph at lines 17888--17891 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1560] [1561] Underfull \vbox (badness 10000) has occurred while \output is active [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] Underfull \hbox (badness 1377) in paragraph at lines 18915--18920 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on [1575] Underfull \hbox (badness 1735) in paragraph at lines 18920--18923 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18933--18937 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18933--18937 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 18941--18945 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1576] [1577] [1578] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19166--19166 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19169--19169 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1579] [1580] [1581] [1582] [1583] [1584] [1585] Underfull \hbox (badness 1337) in paragraph at lines 19628--19631 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1586] [1587] [1588] [1589] [1590] [1591] [1592] [1593] Underfull \hbox (badness 10000) in paragraph at lines 20099--20105 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1594] [1595] [1596] [1597] [1598] Underfull \hbox (badness 1194) in paragraph at lines 20429--20432 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1599] [1600] [1601] [1602] [1603] [1604] Underfull \hbox (badness 2503) in paragraph at lines 20808--20811 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1605] Underfull \hbox (badness 3919) in paragraph at lines 20835--20837 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1606] [1607] [1608] [1609] [1610] [1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621] Underfull \hbox (badness 10000) in paragraph at lines 21913--21919 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1622] [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 1337) in paragraph at lines 23270--23276 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1643] [1644] [1645] [1646] [1647] [1648] [1649] Underfull \hbox (badness 1436) in paragraph at lines 23695--23698 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1650] [1651] Underfull \hbox (badness 10000) in paragraph at lines 23836--23837 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1652] [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] Underfull \hbox (badness 1824) in paragraph at lines 24808--24814 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24808--24814 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 24829--24832 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] Underfull \hbox (badness 2165) in paragraph at lines 25410--25415 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1675] [1676] [1677] [1678] Underfull \hbox (badness 1867) in paragraph at lines 25619--25621 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25634--25638 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] Underfull \vbox (badness 10000) has occurred while \output is active [1702] Underfull \hbox (badness 3514) in paragraph at lines 27282--27287 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1703] [1704] [1705] [1706] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27516--27516 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1707] Underfull \hbox (badness 3514) in paragraph at lines 27552--27558 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1708] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27609--27609 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27611--27611 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1709] [1710] Underfull \hbox (badness 3514) in paragraph at lines 27785--27790 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1711] [1712] Underfull \hbox (badness 3514) in paragraph at lines 27872--27877 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1713] Underfull \hbox (badness 3514) in paragraph at lines 27937--27942 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1714] Underfull \hbox (badness 3514) in paragraph at lines 28031--28036 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1715] [1716] Underfull \hbox (badness 6691) in paragraph at lines 28123--28128 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] Underfull \hbox (badness 4024) in paragraph at lines 28614--28617 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1725] [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] Underfull \hbox (badness 5431) in paragraph at lines 29220--29222 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1734] [1735] [1736] [1737] Underfull \hbox (badness 5431) in paragraph at lines 29430--29433 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1738] [1739] [1740] [1741] [1742] Underfull \hbox (badness 1337) in paragraph at lines 29745--29749 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1743] [1744] [1745] [1746] Underfull \hbox (badness 1616) in paragraph at lines 30057--30060 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1747] [1748] [1749] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 3557) in paragraph at lines 31192--31196 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1765] [1766] Underfull \vbox (badness 10000) has occurred while \output is active [1767] [1768] [1769] Underfull \hbox (badness 1337) in paragraph at lines 31556--31560 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1770] [1771] [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 1337) in paragraph at lines 32085--32089 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1778] [1779] [1780] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32292--32292 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1781] [1782] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32453--32453 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1783] [1784] [1785] [1786] [1787]) (./stats4-pkg.tex [1788] Chapter 11. [1789] [1790] [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] [1793] [1794] [1795] [1796]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.show.Rdash.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1797] [1798] [1799]) (./tcltk-pkg.tex [1800] Chapter 12. [1801] [1802] [1803] [1804] [1805] [1806] [1807] Underfull \vbox (badness 10000) has occurred while \output is active [1808] Underfull \hbox (badness 1546) in paragraph at lines 666--673 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820]) (./tools-pkg.tex Chapter 13. [1821] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1822] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1823] [1824] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1825] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1826] [1827] Underfull \hbox (badness 1142) in paragraph at lines 463--467 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1828] [1829] [1830] [1831] [1832] Overfull \vbox (7.18602pt too high) has occurred while \output is active [1833] [1834] [1835] [1836] [1837] [1838] Underfull \hbox (badness 1014) in paragraph at lines 1174--1176 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1180--1182 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous Underfull \hbox (badness 10000) in paragraph at lines 1217--1220 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1217--1220 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1839] [1840] [1841] [1842] [1843] Underfull \hbox (badness 2293) in paragraph at lines 1569--1571 []\T1/zi4/m/n/10 CRAN_memtest_notes() []\T1/ptm/m/n/10 is now dep-re-cated, wit h its func-tion-al-ity in-te-grated into that of [1844] Underfull \hbox (badness 10000) in paragraph at lines 1595--1598 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1845] [1846] Underfull \hbox (badness 4096) in paragraph at lines 1714--1722 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1724--1726 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1847] [1848] [1849]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1926 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ig nored \relax l.1927 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1850] [1851] [1852] [1853] Overfull \hbox (17.27782pt too wide) in paragraph at lines 2229--2229 []\T1/zi4/m/n/9 writeLines(paste0("\\newcommand{\\logo}{\\if{html}{\\figure{Rl ogo.svg}{options: width=100}",[] [1854] [1855] [1856] Underfull \hbox (badness 4096) in paragraph at lines 2398--2406 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1857] [1858] [1859] [1860] [1861] [1862] [1863] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2892. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. [1864] [1865] [1866] [1867] Underfull \hbox (badness 1424) in paragraph at lines 3195--3197 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] Underfull \hbox (badness 10000) in paragraph at lines 3897--3899 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 4036--4039 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1881] Underfull \hbox (badness 1137) in paragraph at lines 4138--4140 []\T1/ptm/m/n/10 a ma-trix spec-i-fy-ing all pack-ages in-stalled on the lo-cal sys-tem, as from [1882] [1883] [1884] [1885] [1886] Underfull \hbox (badness 1796) in paragraph at lines 4446--4451 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1887] Underfull \hbox (badness 4699) in paragraph at lines 4496--4500 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4496--4500 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from Underfull \hbox (badness 1838) in paragraph at lines 4524--4530 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4524--4530 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1888] [1889] [1890] [1891] Underfull \hbox (badness 2197) in paragraph at lines 4799--4809 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1892] Underfull \hbox (badness 1571) in paragraph at lines 4865--4869 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1893] [1894] [1895]) (./utils-pkg.tex [1896] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] Underfull \hbox (badness 10000) in paragraph at lines 726--732 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 726--732 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1907] [1908] [1909] Underfull \hbox (badness 3861) in paragraph at lines 931--936 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1910] [1911] [1912] Underfull \hbox (badness 3323) in paragraph at lines 1115--1123 []\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use []\T1/zi4/m/it /10 bibtex = T|F []\T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m $\T1/ptm/m/n/10 , in-di-cat- Underfull \hbox (badness 2961) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f or-mat- Underfull \hbox (badness 3919) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is Underfull \hbox (badness 2875) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 taken as [][][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex. max", 1) []\T1/ptm/m/n/10 which is []\T1/zi4/m/it/10 1 []\T1/ptm/m/n/10 typ-i-c ally. Underfull \hbox (badness 1817) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f ault by Underfull \hbox (badness 10000) in paragraph at lines 1127--1129 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 1371) in paragraph at lines 1637--1639 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1920] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1707. [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 2057) in paragraph at lines 2358--2360 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1930] [1931] [1932] [1933] [1934]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.clipboard}) has been already used, duplicate ignored \relax l.2710 ... the Clipboard in MS Windows}{clipboard} [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] Underfull \hbox (badness 6842) in paragraph at lines 4007--4012 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1954] Underfull \hbox (badness 1430) in paragraph at lines 4070--4078 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1955] [1956] Underfull \hbox (badness 10000) in paragraph at lines 4275--4277 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1957] [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.for mat}) has been already used, duplicate ignored \relax l.5044 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.format.1}) has been already used, dupl icate ignored \relax l.5044 ...mat Unordered and Ordered Lists}{format} [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 1622) in paragraph at lines 5567--5571 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [1977] [1978] [1979] [1980] [1981] [1982] Underfull \hbox (badness 1448) in paragraph at lines 5946--5951 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [1983] [1984] [1985] [1986] [1987] [1988] [1989] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6492. [1990] Underfull \hbox (badness 1371) in paragraph at lines 6496--6498 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1991] Underfull \hbox (badness 1502) in paragraph at lines 6585--6590 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6585--6590 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [1992] [1993] Underfull \hbox (badness 10000) in paragraph at lines 6758--6767 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [1994] Underfull \hbox (badness 2150) in paragraph at lines 6822--6825 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [1995] [1996] Underfull \hbox (badness 3118) in paragraph at lines 6961--6963 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [1997] [1998] Underfull \hbox (badness 1325) in paragraph at lines 7140--7144 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [1999] Underfull \hbox (badness 1424) in paragraph at lines 7232--7235 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2000] Underfull \hbox (badness 3219) in paragraph at lines 7303--7310 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7303--7310 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7303--7310 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7303--7310 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7311--7314 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2001] [2002] Underfull \hbox (badness 1024) in paragraph at lines 7438--7441 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7471--7476 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] [2013] Underfull \hbox (badness 10000) in paragraph at lines 8175--8177 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2014] [2015] [2016] [2017] [2018] [2019] [2020] [2021] [2022] [2023] [2024] [2025] Underfull \hbox (badness 2310) in paragraph at lines 8935--8940 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2026] [2027] [2028] [2029] [2030] [2031] [2032] Underfull \hbox (badness 1248) in paragraph at lines 9461--9465 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2033] Underfull \hbox (badness 1789) in paragraph at lines 9541--9543 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2034] [2035] [2036] [2037] [2038] [2039] [2040] [2041] [2042] Underfull \vbox (badness 5533) has occurred while \output is active [2043] [2044] [2045] Underfull \hbox (badness 1097) in paragraph at lines 10378--10381 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2046] [2047] Underfull \hbox (badness 3000) in paragraph at lines 10514--10519 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 2134) in paragraph at lines 11103--11108 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2056] Underfull \hbox (badness 10000) in paragraph at lines 11159--11164 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11159--11164 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \hbox (badness 2469) in paragraph at lines 11653--11657 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11653--11657 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 4060) in paragraph at lines 12077--12080 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2070] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12100--12100 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2071] [2072] [2073] Underfull \hbox (badness 2150) in paragraph at lines 12355--12357 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2074] [2075] [2076] [2077] Underfull \hbox (badness 10000) in paragraph at lines 12575--12579 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12608--12614 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12623--12631 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). 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If [2080] Underfull \hbox (badness 4779) in paragraph at lines 12842--12844 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 12872--12879 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2081] [2082] [2083] [2084] [2085] [2086] Underfull \hbox (badness 3780) in paragraph at lines 13280--13284 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13296--13299 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2087] [2088] [2089] Underfull \hbox (badness 2302) in paragraph at lines 13501--13503 []\T1/ptm/m/n/10 Convert file paths to the short form. 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Ob- [2102] [2103] Underfull \hbox (badness 1460) in paragraph at lines 14407--14415 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2104] [2105] Underfull \hbox (badness 6510) in paragraph at lines 14557--14561 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14564--14567 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14564--14567 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2106] [2107] [2108] [2109] [2110] [2111] [2112] [2113] [2114] Underfull \hbox (badness 10000) in paragraph at lines 15233--15238 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15233--15238 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15239--15241 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2115] Underfull \hbox (badness 10000) in paragraph at lines 15298--15301 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129] [2130]) [2131] [2132] (./KernSmooth-pkg.tex Chapter 15. [2133] [2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]) (./MASS-pkg.tex Chapter 16. [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] Underfull \hbox (badness 10000) in paragraph at lines 2879--2884 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2183] [2184] Underfull \hbox (badness 4686) in paragraph at lines 3047--3049 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] [2209] Underfull \hbox (badness 1117) in paragraph at lines 4808--4811 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2210] Underfull \hbox (badness 1117) in paragraph at lines 4886--4889 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6152 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.npk.1}) has been already used, duplica te ignored \relax l.6152 ...sical N, P, K Factorial Experiment}{npk} [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 1117) in paragraph at lines 7123--7130 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2241] Underfull \hbox (badness 3138) in paragraph at lines 7194--7200 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2242] [2243] [2244] Underfull \hbox (badness 1910) in paragraph at lines 7373--7376 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] Underfull \hbox (badness 4686) in paragraph at lines 8006--8008 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 41--44 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 41--44 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2291] Underfull \hbox (badness 1769) in paragraph at lines 95--98 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2292] [2293] [2294] [2295] Underfull \hbox (badness 5119) in paragraph at lines 514--518 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2296] [2297] Underfull \hbox (badness 2035) in paragraph at lines 610--613 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2298] [2299] Underfull \hbox (badness 1701) in paragraph at lines 763--767 []\T1/ptm/m/n/10 The orig-i-nal LA-PACK source code, in-clud-ing doc-u-men-ta-t ion; [][]$\T1/zi4/m/it/10 https : / / www . netlib . org / [2300] [2301] Underfull \hbox (badness 1521) in paragraph at lines 882--887 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 882--887 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 882--887 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2302] [2303] Underfull \hbox (badness 10000) in paragraph at lines 1061--1063 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2304] [2305]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.chol}) has been already used, duplicate ignored \relax l.1173 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.chol.1}) has been already used, duplic ate ignored \relax l.1173 ...- 'Matrix' S4 Generic and Methods}{chol} [2306] [2307] [2308] Underfull \hbox (badness 2277) in paragraph at lines 1428--1431 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2309] [2310] Underfull \hbox (badness 1097) in paragraph at lines 1600--1603 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1606--1610 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend [2311]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.col Sums}) has been already used, duplicate ignored \relax l.1663 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colSums.1}) has been already used, dup licate ignored \relax l.1663 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colMeans}) has been already used, dupl icate ignored \relax l.1664 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowMeans}) has been already used, duplicate i gnored \relax l.1685 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowSums}) has been already used, duplicate ig nored \relax l.1696 \aliasA{rowSums}{colSums}{rowSums} [2312] [2313] [2314] Underfull \hbox (badness 3547) in paragraph at lines 1915--1918 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2315] [2316] [2317] [2318] [2319] [2320] [2321] [2322] [2323] Underfull \hbox (badness 2717) in paragraph at lines 2654--2658 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2324] [2325] Underfull \hbox (badness 6842) in paragraph at lines 2744--2747 []\T1/zi4/m/it/10 Diagonal() []\T1/ptm/m/n/10 re-turns an ob-ject of class [][] []\T1/zi4/m/it/10 ddiMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 ldi Matrix[][][] []\T1/ptm/m/n/10 (with ``su-per-class'' [2326] Underfull \hbox (badness 8019) in paragraph at lines 3028--3030 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 3031--3035 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2327] [2328] [2329] Underfull \hbox (badness 1902) in paragraph at lines 3288--3290 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2330] Underfull \hbox (badness 2020) in paragraph at lines 3322--3325 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2331] [2332] [2333] Underfull \hbox (badness 1354) in paragraph at lines 3593--3596 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2334] [2335] [2336] [2337] [2338] Underfull \hbox (badness 4518) in paragraph at lines 4000--4003 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 4003--4006 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2339] [2340] Underfull \hbox (badness 2318) in paragraph at lines 4127--4131 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2341] Underfull \hbox (badness 3240) in paragraph at lines 4260--4264 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2342] [2343] [2344] [2345] [2346] [2347] [2348] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4693--4693 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4700--4700 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2349] [2350] [2351] Underfull \hbox (badness 1931) in paragraph at lines 4932--4934 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2352] [2353] [2354] [2355] Underfull \hbox (badness 1005) in paragraph at lines 5238--5243 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5238--5243 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 5257--5260 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2356] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5305--5305 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2357] Underfull \hbox (badness 3229) in paragraph at lines 5406--5415 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the [2358] Underfull \hbox (badness 10000) in paragraph at lines 5448--5450 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5453--5456 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low Underfull \hbox (badness 10000) in paragraph at lines 5463--5466 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2359] [2360] [2361] [2362] [2363] Underfull \hbox (badness 1014) in paragraph at lines 5842--5845 []\T1/zi4/m/it/10 isTriangular(M) []\T1/ptm/m/n/10 re-turns a [][][]\T1/zi4/m/i t/10 logical[][][] []\T1/ptm/m/n/10 in-di-cat-ing if []\T1/zi4/m/it/10 M []\T1/ ptm/m/n/10 is a tri-an-gu-lar ma-trix. Anal-o-gously, [2364] [2365] [2366] [2367] [2368] Underfull \hbox (badness 2478) in paragraph at lines 6269--6274 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class [2369] Underfull \hbox (badness 10000) in paragraph at lines 6277--6280 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2370] [2371] Underfull \hbox (badness 10000) in paragraph at lines 6564--6567 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2372] Underfull \hbox (badness 10000) in paragraph at lines 6636--6639 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2373] Underfull \hbox (badness 2050) in paragraph at lines 6712--6715 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2374] [2375] [2376] [2377] [2378] [2379]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7124 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7217--7219 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode [2380] Underfull \hbox (badness 4846) in paragraph at lines 7222--7225 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7227--7230 [2381]pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rp cent.*.Rpcent.}) has been already used, duplicate ignored \relax l.7300 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.crossprod}) has been already used, dup licate ignored \relax l.7410 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.tcrossprod}) has been already used, du plicate ignored \relax l.7513 ...tcrossprod}{matrix-products}{tcrossprod} [2382] Underfull \hbox (badness 10000) in paragraph at lines 7690--7695 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7690--7695 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7699--7701 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7701--7703 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2383] [2384] Underfull \hbox (badness 1430) in paragraph at lines 7849--7854 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2385] [2386] Underfull \hbox (badness 10000) in paragraph at lines 7975--7977 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2387] [2388] Underfull \vbox (badness 10000) has occurred while \output is active [2389] Underfull \hbox (badness 2478) in paragraph at lines 8183--8188 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8191--8194 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2390] [2391] Underfull \hbox (badness 5924) in paragraph at lines 8385--8387 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2392]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.nor m}) has been already used, duplicate ignored \relax l.8425 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignor ed \relax l.8425 \HeaderA{norm}{Matrix Norms}{norm} [2393] [2394] [2395] Underfull \hbox (badness 10000) in paragraph at lines 8787--8790 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2396] Underfull \hbox (badness 10000) in paragraph at lines 8862--8865 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2397] Underfull \hbox (badness 1014) in paragraph at lines 8947--8953 []\T1/ptm/m/n/10 It is used to de-fine com-mon meth-ods for ef-fi-cient sub-set -ting, trans-pos-ing etc for the \T1/ptm/m/it/10 ac- [2398] [2399] Underfull \hbox (badness 10000) in paragraph at lines 9111--9113 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2400] [2401] [2402] [2403]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9348 \aliasA{qr}{qr-methods}{qr} [2404] [2405] Underfull \hbox (badness 7186) in paragraph at lines 9517--9523 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2406] [2407] [2408]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) has been already used, duplicate ignored \relax l.9674 ... the Reciprocal Condition Number}{rcond} [2409] [2410] [2411] [2412] Underfull \hbox (badness 2351) in paragraph at lines 9978--9986 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 9978--9986 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2413] [2414] [2415] [2416]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.solve}) has been already used, duplicate ignored \relax l.10254 \aliasA{solve}{solve-methods}{solve} [2417] [2418] Underfull \hbox (badness 4403) in paragraph at lines 10480--10483 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2419] Underfull \hbox (badness 10000) in paragraph at lines 10550--10553 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10586--10589 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10597--10601 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2420] [2421] [2422] [2423] [2424] [2425] [2426] [2427] Underfull \hbox (badness 10000) in paragraph at lines 11174--11182 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11174--11182 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11199--11207 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11199--11207 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2428]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr. Q}) has been already used, duplicate ignored \relax l.11265 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2429] [2430] Underfull \hbox (badness 5036) in paragraph at lines 11451--11453 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2431] [2432] Underfull \hbox (badness 2828) in paragraph at lines 11636--11639 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11658--11661 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2433] Underfull \vbox (badness 10000) has occurred while \output is active [2434] [2435] [2436] [2437] Underfull \hbox (badness 2057) in paragraph at lines 12007--12009 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2438] [2439] Underfull \hbox (badness 10000) in paragraph at lines 12176--12181 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12182--12188 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2440] Underfull \hbox (badness 1902) in paragraph at lines 12217--12221 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2441] [2442] [2443] [2444] [2445] [2446] [2447] Underfull \hbox (badness 6910) in paragraph at lines 12816--12818 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2448] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12863. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12863. [2449] [2450]) (./boot-pkg.tex Chapter 18. [2451] [2452] [2453] [2454] [2455] [2456] [2457] [2458] [2459] [2460] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2461] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2462] Underfull \vbox (badness 10000) has occurred while \output is active [2463] [2464] [2465] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2466] [2467] [2468] [2469] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2470] [2471] [2472] [2473] [2474] [2475] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2476] [2477] Underfull \vbox (badness 10000) has occurred while \output is active [2478] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2479] [2480] [2481] [2482] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2483] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2484] [2485] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2486] [2487] [2488] [2489] [2490] [2491] [2492] [2493] [2494] [2495] [2496] [2497] [2498] [2499] [2500] [2501] [2502] [2503] [2504] [2505] [2506] [2507] [2508] [2509] [2510] [2511] [2512] [2513] [2514] [2515] [2516] [2517] [2518] [2519] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2520] [2521] [2522] [2523] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2524] [2525] [2526] [2527] [2528] [2529] [2530] [2531] [2532] [2533] [2534] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2535] [2536] [2537] [2538] [2539] [2540] [2541] [2542] [2543] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2544] [2545] [2546] [2547] [2548] [2549] [2550] [2551] [2552] [2553]) (./class-pkg.tex [2554] Chapter 19. [2555] [2556] [2557] [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570]) (./cluster-pkg.tex Chapter 20. [2571] [2572] [2573] [2574] [2575] Underfull \vbox (badness 7777) has occurred while \output is active [2576] [2577] [2578] [2579] [2580] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2581] [2582] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2583] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2584] [2585] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2586] [2587] [2588] [2589] [2590] [2591] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2592] [2593] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2594] [2595] [2596] [2597] [2598] [2599] [2600] [2601] Underfull \hbox (badness 10000) in paragraph at lines 2183--2186 Underfull \hbox (badness 10000) in paragraph at lines 2197--2203 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2602] [2603] [2604] [2605] Underfull \hbox (badness 6675) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2606] [2607] [2608] [2609] [2610] [2611] [2612] Underfull \hbox (badness 2980) in paragraph at lines 2962--2966 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2613] [2614] [2615] [2616] [2617] [2618] Underfull \hbox (badness 1142) in paragraph at lines 3303--3306 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2619] [2620] Underfull \hbox (badness 1142) in paragraph at lines 3422--3425 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2621] [2622] [2623] Underfull \hbox (badness 2582) in paragraph at lines 3645--3650 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2624] Underfull \hbox (badness 2698) in paragraph at lines 3707--3712 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3707--3712 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2625] [2626] [2627] [2628] [2629] Underfull \hbox (badness 10000) in paragraph at lines 3999--4001 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2630] [2631] [2632] [2633] Underfull \hbox (badness 2626) in paragraph at lines 4228--4233 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2634] Underfull \hbox (badness 1383) in paragraph at lines 4306--4311 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2635] [2636] [2637] [2638] [2639] [2640] [2641] Underfull \hbox (badness 10000) in paragraph at lines 4750--4752 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2642] [2643]) (./codetools-pkg.tex [2644] Chapter 21. [2645] [2646] [2647] [2648] [2649]) (./foreign-pkg.tex [2650] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2651] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2652] [2653] [2654] [2655] [2656] [2657] [2658] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, Underfull \hbox (badness 7133) in paragraph at lines 550--558 []\T1/ptm/m/n/10 URL [][]$\T1/zi4/m/it/10 https : / / docs . microsoft . com / en-[]us / windows / win32 / intl / code-[]page-[]identifiers$[][] [2659] Overfull \hbox (6.73795pt too wide) in paragraph at lines 624--624 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2660] [2661] [2662] Underfull \hbox (badness 10000) in paragraph at lines 812--813 [2663] Underfull \hbox (badness 10000) in paragraph at lines 869--873 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2664] [2665] Underfull \hbox (badness 10000) in paragraph at lines 990--992 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2666] [2667] [2668] [2669] Underfull \hbox (badness 10000) in paragraph at lines 1270--1276 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2670] [2671]) (./lattice-pkg.tex [2672] Chapter 23. [2673] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2674] [2675] [2676] [2677] [2678] [2679] [2680] [2681] [2682] [2683] [2684] [2685] [2686] [2687] [2688] Underfull \hbox (badness 1062) in paragraph at lines 1398--1402 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2689] Underfull \vbox (badness 4416) has occurred while \output is active [2690] Underfull \hbox (badness 1803) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2691] [2692] [2693] Underfull \hbox (badness 3009) in paragraph at lines 1725--1727 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1755--1759 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2694] [2695] [2696] [2697] [2698] Underfull \hbox (badness 10000) in paragraph at lines 2141--2144 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2699] [2700] [2701] [2702] [2703] [2704] [2705] [2706] [2707] [2708] Underfull \hbox (badness 2781) in paragraph at lines 2849--2851 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2709] [2710] Underfull \hbox (badness 2486) in paragraph at lines 3001--3005 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2711] [2712] [2713] [2714] [2715] [2716]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.parallel}) has been already used, duplicate ign ored \relax l.3475 \aliasA{parallel}{B\_08\_splom}{parallel} [2717] [2718] [2719] [2720] [2721] [2722] [2723] [2724] Underfull \hbox (badness 5696) in paragraph at lines 3970--3974 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2725] Underfull \hbox (badness 1173) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in [2726] Underfull \hbox (badness 3219) in paragraph at lines 4136--4138 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2727] [2728] Underfull \hbox (badness 3492) in paragraph at lines 4336--4346 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , [2729] Underfull \hbox (badness 10000) in paragraph at lines 4361--4364 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4364--4366 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2730] [2731] [2732] [2733] [2734] [2735] [2736] [2737] [2738] Underfull \hbox (badness 6157) in paragraph at lines 5087--5090 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2739] [2740] [2741] [2742] [2743] [2744] [2745] Underfull \hbox (badness 10000) in paragraph at lines 5545--5548 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5545--5548 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2746] [2747] [2748] [2749] [2750] Underfull \hbox (badness 4805) in paragraph at lines 5907--5911 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 5918--5925 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 5918--5925 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 5918--5925 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2751] [2752] [2753] [2754] Underfull \hbox (badness 4242) in paragraph at lines 6218--6223 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6218--6223 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2755] [2756] Underfull \hbox (badness 2310) in paragraph at lines 6334--6339 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2757] [2758] [2759] [2760] [2761] [2762] [2763] [2764] [2765] [2766] [2767] Underfull \hbox (badness 3168) in paragraph at lines 7116--7120 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2768] [2769] [2770] [2771] Underfull \hbox (badness 2012) in paragraph at lines 7387--7390 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2772] [2773] Underfull \hbox (badness 3333) in paragraph at lines 7559--7561 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing [2774] [2775] [2776] Underfull \vbox (badness 10000) has occurred while \output is active [2777] [2778] [2779] Underfull \hbox (badness 1436) in paragraph at lines 7973--7979 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2780] [2781] [2782] [2783] [2784] [2785] [2786] [2787] Underfull \hbox (badness 10000) in paragraph at lines 8531--8534 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2788] Underfull \hbox (badness 1092) in paragraph at lines 8577--8579 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2789] [2790] Underfull \hbox (badness 3895) in paragraph at lines 8738--8741 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2791] Underfull \hbox (badness 1515) in paragraph at lines 8814--8818 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2792] [2793] Underfull \hbox (badness 6316) in paragraph at lines 8920--8925 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 8937--8940 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2794] [2795] [2796] [2797] Underfull \hbox (badness 1728) in paragraph at lines 9228--9232 []\T1/ptm/m/n/10 Returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2798] [2799] [2800] [2801] [2802] [2803] [2804] Underfull \hbox (badness 2310) in paragraph at lines 9692--9696 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9697--9700 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2805] [2806] [2807]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma}) has been already used, duplicate ignored \relax l.9923 \aliasA{melanoma}{H\_melanoma}{melanoma} [2808] [2809] [2810] Underfull \hbox (badness 4144) in paragraph at lines 10147--10150 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10147--10150 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2811] [2812]) (./mgcv-pkg.tex Chapter 24. [2813] [2814] [2815] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2816] [2817] [2818] [2819] Underfull \hbox (badness 10000) in paragraph at lines 378--385 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 378--385 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2820] [2821] [2822] [2823] [2824] Underfull \hbox (badness 1406) in paragraph at lines 703--704 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2825] [2826] [2827] Underfull \hbox (badness 1158) in paragraph at lines 813--815 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion Underfull \hbox (badness 1259) in paragraph at lines 876--877 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2828] [2829] [2830] [2831] [2832] Underfull \hbox (badness 1281) in paragraph at lines 1160--1161 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2833] [2834] Underfull \vbox (badness 10000) has occurred while \output is active [2835] Underfull \vbox (badness 10000) has occurred while \output is active [2836] [2837] Underfull \vbox (badness 10000) has occurred while \output is active [2838] [2839] [2840] [2841] [2842] [2843] [2844] [2845] [2846] [2847] [2848] [2849] [2850] [2851] [2852] [2853] Underfull \hbox (badness 1142) in paragraph at lines 2361--2365 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 2387--2392 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2854] [2855] [2856] [2857] [2858] [2859] Underfull \vbox (badness 10000) has occurred while \output is active [2860] Underfull \vbox (badness 10000) has occurred while \output is active [2861] [2862] [2863] [2864] [2865] [2866] [2867] [2868] [2869] [2870] [2871] [2872] [2873] [2874] [2875] [2876] [2877] Underfull \hbox (badness 10000) in paragraph at lines 3822--3826 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2878] [2879] Underfull \vbox (badness 10000) has occurred while \output is active [2880] [2881] [2882] Underfull \hbox (badness 1184) in paragraph at lines 4108--4112 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2883] [2884] [2885] [2886] [2887] [2888] [2889] [2890] [2891] [2892] [2893] [2894] Underfull \hbox (badness 1142) in paragraph at lines 4829--4833 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2895] Underfull \hbox (badness 1231) in paragraph at lines 4933--4935 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2896] [2897] [2898] Underfull \vbox (badness 10000) has occurred while \output is active [2899] [2900] [2901] [2902] Underfull \hbox (badness 2181) in paragraph at lines 5377--5378 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2903] [2904] [2905] [2906] [2907] [2908] [2909] Underfull \hbox (badness 10000) in paragraph at lines 5766--5767 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2910] [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] Underfull \hbox (badness 1142) in paragraph at lines 6351--6355 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2921] [2922] [2923] Underfull \vbox (badness 10000) has occurred while \output is active [2924] [2925] [2926] [2927] Underfull \hbox (badness 1087) in paragraph at lines 6723--6724 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2928] [2929] Underfull \vbox (badness 10000) has occurred while \output is active [2930] Underfull \vbox (badness 10000) has occurred while \output is active [2931] [2932] [2933] [2934] [2935] [2936] [2937] [2938] [2939] [2940] [2941] [2942] [2943] Underfull \hbox (badness 1242) in paragraph at lines 7672--7673 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] [2953] [2954] Underfull \hbox (badness 6001) in paragraph at lines 8312--8314 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] [2964] Underfull \vbox (badness 10000) has occurred while \output is active [2965] [2966] Underfull \hbox (badness 1038) in paragraph at lines 9061--9064 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9061--9064 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [2967] Underfull \hbox (badness 10000) in paragraph at lines 9117--9120 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [2968] [2969] [2970] [2971] [2972] [2973] [2974] [2975] [2976] [2977] [2978] Underfull \hbox (badness 1852) in paragraph at lines 9790--9793 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2979] [2980] [2981] Underfull \hbox (badness 1852) in paragraph at lines 9959--9962 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2982] [2983] Underfull \vbox (badness 10000) has occurred while \output is active [2984] [2985] Underfull \hbox (badness 1205) in paragraph at lines 10191--10193 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10191--10193 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10197--10202 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [2986] Underfull \hbox (badness 1205) in paragraph at lines 10281--10283 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10281--10283 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [2987] [2988] [2989] Underfull \hbox (badness 1253) in paragraph at lines 10480--10482 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [2990] [2991] [2992] [2993] [2994] [2995] Underfull \hbox (badness 4792) in paragraph at lines 10741--10744 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10741--10744 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [2996] Underfull \hbox (badness 10000) in paragraph at lines 10848--10851 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [2997] [2998] [2999] [3000] [3001] [3002] [3003] [3004] [3005] [3006] [3007] [3008] [3009] Underfull \vbox (badness 10000) has occurred while \output is active [3010] Underfull \hbox (badness 3861) in paragraph at lines 11637--11640 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3011] [3012] Underfull \hbox (badness 1320) in paragraph at lines 11752--11757 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3013] Underfull \hbox (badness 1975) in paragraph at lines 11858--11863 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3014] [3015] Underfull \hbox (badness 1762) in paragraph at lines 11947--11959 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3016] [3017] [3018] Underfull \hbox (badness 7667) in paragraph at lines 12159--12165 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3019] Underfull \hbox (badness 10000) in paragraph at lines 12200--12201 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3020] [3021] [3022] [3023] Underfull \vbox (badness 10000) has occurred while \output is active [3024] Underfull \hbox (badness 10000) in paragraph at lines 12477--12479 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3025] [3026] Underfull \hbox (badness 10000) in paragraph at lines 12607--12608 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3027] [3028] [3029] Underfull \hbox (badness 1436) in paragraph at lines 12745--12752 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3030] [3031] Underfull \hbox (badness 10000) in paragraph at lines 12840--12841 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3032] [3033] [3034] [3035] [3036] [3037] [3038] [3039] [3040] [3041] Underfull \hbox (badness 10000) in paragraph at lines 13441--13447 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13441--13447 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3042] [3043] [3044] Underfull \vbox (badness 10000) has occurred while \output is active [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] [3047] Underfull \hbox (badness 10000) in paragraph at lines 13784--13785 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3048] [3049] [3050] [3051] Underfull \hbox (badness 3895) in paragraph at lines 14044--14047 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3052] Underfull \hbox (badness 10000) in paragraph at lines 14089--14091 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3053] [3054] [3055] [3056] [3057] Underfull \hbox (badness 1371) in paragraph at lines 14363--14369 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3058] [3059] [3060] [3061] Underfull \hbox (badness 2326) in paragraph at lines 14608--14615 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3062] Underfull \hbox (badness 2158) in paragraph at lines 14693--14693 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3063] [3064] [3065] [3066] [3067] [3068] [3069] [3070] [3071] [3072] [3073] [3074] [3075] [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] Underfull \hbox (badness 1796) in paragraph at lines 16342--16345 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3091] [3092] [3093] [3094] [3095] [3096] [3097] [3098] [3099]) (./nlme-pkg.tex [3100] Chapter 25. [3101] [3102] [3103] [3104] [3105] [3106] [3107] [3108] [3109] [3110] [3111] [3112] [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] Underfull \hbox (badness 10000) in paragraph at lines 2258--2264 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3135] [3136] [3137] [3138] [3139] [3140] [3141] [3142] [3143] [3144] [3145] [3146] [3147] [3148] [3149pdfTeX warning (ext4): destination with the same iden tifier (name{Rfn.corMatrix.corCompSymm}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.3194 ] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] Underfull \hbox (badness 1067) in paragraph at lines 4419--4424 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] Underfull \hbox (badness 10000) in paragraph at lines 5165--5169 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3180] [3181] [3182] [3183] [3184] [3185] [3186] Underfull \hbox (badness 10000) in paragraph at lines 5597--5600 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3187] [3188] [3189] [3190] [3191] [3192] [3193] Underfull \hbox (badness 10000) in paragraph at lines 5978--5983 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3194] [3195] [3196] [3197] Underfull \hbox (badness 1490) in paragraph at lines 6248--6259 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3198] Underfull \hbox (badness 10000) in paragraph at lines 6312--6314 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3199] [3200] [3201] [3202] [3203] [3204] Underfull \hbox (badness 10000) in paragraph at lines 6725--6727 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3205] [3206] [3207] [3208] Underfull \hbox (badness 10000) in paragraph at lines 6997--7004 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3209] [3210] [3211] [3212] Underfull \hbox (badness 10000) in paragraph at lines 7257--7262 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3213] [3214] [3215] [3216] [3217] [3218] [3219] [3220] [3221] [3222] [3223] [3224] [3225] [3226] [3227] [3228] [3229] [3230] [3231] Underfull \hbox (badness 10000) in paragraph at lines 8525--8527 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3232] [3233] [3234] [3235] [3236] Underfull \hbox (badness 10000) in paragraph at lines 8804--8811 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3237] [3238] [3239] [3240] [3241] [3242] [3243] [3244] Underfull \hbox (badness 10000) in paragraph at lines 9326--9333 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3245] [3246] [3247] [3248] [3249]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9688 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.Matrix.1}) has been already used, dupl icate ignored \relax l.9688 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3250] [3251] [3252] [3253] [3254] [3255] [3256] [3257] [3258] [3259] [3260] [3261] Underfull \hbox (badness 1596) in paragraph at lines 10461--10487 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3262] [3263] Underfull \hbox (badness 1490) in paragraph at lines 10599--10605 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3264] [3265] [3266] [3267] Underfull \hbox (badness 10000) in paragraph at lines 10840--10842 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3268] [3269] [3270] [3271] [3272] [3273] [3274] [3275] [3276] [3277] [3278] [3279] [3280] [3281] [3282] [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] [3291] [3292] [3293] [3294] [3295] [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] Underfull \hbox (badness 1286) in paragraph at lines 13737--13744 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3310] [3311] [3312] [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330]pdfTeX war ning (ext4): destination with the same identifier (name{Rfn.random.effects}) ha s been already used, duplicate ignored \relax l.15180 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.random.effects.1}) has been already us ed, duplicate ignored \relax l.15180 ...Extract Random Effects}{random.effects} [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] Underfull \hbox (badness 3884) in paragraph at lines 15820--15824 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15820--15824 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15820--15824 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3341] [3342] Underfull \hbox (badness 1067) in paragraph at lines 15932--15937 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). 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[3] [4] Underfull \hbox (badness 6252) in paragraph at lines 143--151 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 143--151 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [5] [6] [7] Underfull \hbox (badness 1178) in paragraph at lines 328--331 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [8] [9] [10] Underfull \hbox (badness 2556) in paragraph at lines 567--573 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [11] [12] [13] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [14] [15] [16] [17] [18] [19] [20] [21] [22] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [23] [24] [25] Underfull \hbox (badness 10000) in paragraph at lines 1578--1584 [26] [27] [28] [29] [30] [31] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2056--2056 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] Underfull \hbox (badness 1721) in paragraph at lines 2720--2724 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] Underfull \vbox (badness 10000) has occurred while \output is active [52] [53] [54] [55] [56] [57] [58] Underfull \hbox (badness 10000) in paragraph at lines 3901--3903 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] Underfull \hbox (badness 2521) in paragraph at lines 5196--5198 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6387--6387 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] Underfull \hbox (badness 1303) in paragraph at lines 7281--7288 []\T1/zi4/m/n/10 file []\T1/ptm/m/n/10 can be used with []\T1/zi4/m/n/10 descri ption = "clipboard" []\T1/ptm/m/n/10 in mode []\T1/zi4/m/n/10 "r" []\T1/ptm/m/n /10 only. This reads the Underfull \hbox (badness 2111) in paragraph at lines 7292--7297 []\T1/ptm/m/n/10 Unix users wish-ing to \T1/ptm/m/it/10 write \T1/ptm/m/n/10 to one of the X11 se-lec-tions may be able to do so via [106] [107] Underfull \vbox (badness 10000) has occurred while \output is active [108] [109] [110] [111] [112] [113] [114] [115] Underfull \hbox (badness 2096) in paragraph at lines 7962--7966 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [116] Underfull \hbox (badness 2351) in paragraph at lines 8076--8079 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [117] [118] [119] [120] [121] Underfull \hbox (badness 4479) in paragraph at lines 8393--8404 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [122] [123] [124] [125] [126] [127] Underfull \hbox (badness 1629) in paragraph at lines 8845--8857 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 8845--8857 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] Underfull \hbox (badness 1178) in paragraph at lines 9596--9600 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] Underfull \hbox (badness 2744) in paragraph at lines 11903--11905 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] Underfull \hbox (badness 2253) in paragraph at lines 14099--14101 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [201] Underfull \hbox (badness 1565) in paragraph at lines 14175--14179 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [202] Underfull \hbox (badness 4927) in paragraph at lines 14219--14221 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [203] [204] Underfull \hbox (badness 3148) in paragraph at lines 14321--14326 [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.fi les[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 help[][][][]\T1/ptm/m/n/10 ; [ ][][]\T1/zi4/m/n/10 RShowDoc[][][] []\T1/ptm/m/n/10 call []\T1/zi4/m/n/10 file. show() []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 type = "text"[]\T1/ptm/m/n/10 . Co n-sider Underfull \hbox (badness 1466) in paragraph at lines 14368--14371 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [205] Underfull \vbox (badness 1418) has occurred while \output is active [206] Underfull \hbox (badness 10000) in paragraph at lines 14499--14503 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14510--14513 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [207] [208] [209] [210] Underfull \hbox (badness 3965) in paragraph at lines 14807--14811 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] Underfull \hbox (badness 4429) in paragraph at lines 15588--15591 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [223] Underfull \hbox (badness 10000) in paragraph at lines 15694--15696 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [224] Underfull \hbox (badness 2035) in paragraph at lines 15767--15771 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [225] [226] [227] [228] [229] [230] [231] [232] [233] Underfull \hbox (badness 2452) in paragraph at lines 16379--16383 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16379--16383 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [234] [235] [236] Underfull \hbox (badness 1092) in paragraph at lines 16552--16557 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [237] [238] [239] Underfull \hbox (badness 6741) in paragraph at lines 16805--16809 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [240] [241] [242] Underfull \vbox (badness 10000) has occurred while \output is active [243] [244] [245] [246] [247] [248] [249] Underfull \vbox (badness 10000) has occurred while \output is active [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] Underfull \hbox (badness 1478) in paragraph at lines 18257--18260 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [260] [261] [262] [263] Underfull \hbox (badness 10000) in paragraph at lines 18529--18531 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 18535--18544 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [264] [265] [266] [267] [268] [269] [270] [271] Underfull \hbox (badness 1442) in paragraph at lines 19143--19145 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [272] [273] [274] [275] [276] Underfull \hbox (badness 10000) in paragraph at lines 19474--19480 [277] [278] [279] Underfull \hbox (badness 1248) in paragraph at lines 19719--19722 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [280] [281] [282] [283] [284] Underfull \hbox (badness 4739) in paragraph at lines 19982--19984 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [285] [286] [287] Underfull \hbox (badness 1603) in paragraph at lines 20209--20212 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [288] [289] [290] [291] [292] [293] [294] [295] [296] [297] [298] [299] [300] Underfull \hbox (badness 2469) in paragraph at lines 21066--21071 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [301] Underfull \hbox (badness 1675) in paragraph at lines 21154--21163 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21164--21179 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [302] Underfull \hbox (badness 10000) in paragraph at lines 21214--21217 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21214--21217 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [303] [304] Underfull \hbox (badness 1014) in paragraph at lines 21348--21353 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [305] [306] [307] [308] [309] [310] [311] [312] [313] [314] [315] [316] Underfull \hbox (badness 1264) in paragraph at lines 22197--22205 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [317] Underfull \hbox (badness 4441) in paragraph at lines 22231--22234 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [318] [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] Underfull \hbox (badness 5231) in paragraph at lines 23028--23030 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] [341] [342] [343] [344] Underfull \hbox (badness 10000) in paragraph at lines 24121--24127 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24121--24127 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [345] [346] [347] [348] [349] [350] [351] Underfull \hbox (badness 2790) in paragraph at lines 24618--24621 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 24618--24621 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [352] [353] [354] [355] [356] Underfull \hbox (badness 1194) in paragraph at lines 24941--24944 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [357] [358] [359] Underfull \hbox (badness 2368) in paragraph at lines 25148--25154 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [360] [361] [362] [363] [364] Underfull \hbox (badness 10000) in paragraph at lines 25538--25541 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [365] [366] [367] [368] [369] [370] [371] [372] [373] Underfull \hbox (badness 10000) in paragraph at lines 26159--26161 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] Underfull \hbox (badness 1881) in paragraph at lines 27054--27057 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27078--27080 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [387] [388] Underfull \hbox (badness 2142) in paragraph at lines 27219--27223 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27276--27281 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [389] [390] [391] Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by [392] Underfull \hbox (badness 10000) in paragraph at lines 27583--27586 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 27609--27611 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 27651--27656 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 27657--27668 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 27657--27668 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 27669--27672 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [393] [394] [395] [396] [397] Underfull \vbox (badness 10000) has occurred while \output is active [398] Underfull \hbox (badness 10000) in paragraph at lines 28069--28073 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [399] [400] Underfull \hbox (badness 10000) in paragraph at lines 28216--28219 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [401] Underfull \hbox (badness 7925) in paragraph at lines 28297--28301 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28297--28301 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28302--28311 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [402] [403] [404] [405] [406] [407] [408] [409] [410] [411] [412] [413] [414] [415] Underfull \hbox (badness 2726) in paragraph at lines 29298--29301 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [416] [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] Underfull \hbox (badness 1603) in paragraph at lines 30048--30051 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [428] [429] [430] [431] [432] [433] Underfull \vbox (badness 10000) has occurred while \output is active [434] [435] [436] [437] [438] [439] [440] [441] Underfull \hbox (badness 1533) in paragraph at lines 31085--31088 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [442] [443] Underfull \hbox (badness 1163) in paragraph at lines 31248--31259 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [444] [445] [446] [447] [448] [449] [450] [451] [452] [453] [454] Underfull \vbox (badness 10000) has occurred while \output is active [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] Underfull \hbox (badness 10000) in paragraph at lines 32911--32915 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 32911--32915 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. [468] Underfull \hbox (badness 3557) in paragraph at lines 32932--32934 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 32935--32939 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [469] [470] [471] [472] [473] [474] [475] [476] Underfull \hbox (badness 1655) in paragraph at lines 33529--33531 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [477] [478] [479] [480] [481] [482] [483] [484] [485] [486] [487] [488] [489] [490] [491] [492] [493] [494] Underfull \hbox (badness 2261) in paragraph at lines 34735--34740 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] Underfull \hbox (badness 10000) in paragraph at lines 35855--35866 \T1/zi4/m/n/10 / / docs . microsoft . com / en-[]us / cpp / c-[]language / pars ing-[]c-[]command-[]line-[]arguments ? [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] Underfull \hbox (badness 10000) in paragraph at lines 37386--37388 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [532] [533] [534] [535] [536] [537] Underfull \hbox (badness 2913) in paragraph at lines 37806--37810 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [538] [539] [540] Underfull \hbox (badness 1072) in paragraph at lines 38052--38056 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38057--38061 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [541] Underfull \hbox (badness 10000) in paragraph at lines 38097--38103 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38097--38103 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38097--38103 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38112--38119 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [542] [543] [544] Underfull \hbox (badness 2644) in paragraph at lines 38347--38351 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [545] [546] Underfull \hbox (badness 1142) in paragraph at lines 38500--38506 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [547] [548] [549] [550] [551] [552] [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] Underfull \hbox (badness 1158) in paragraph at lines 39801--39803 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [566] [567] [568] [569] [570] [571] [572] [573] [574] Underfull \hbox (badness 1137) in paragraph at lines 40391--40397 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails [575] Underfull \hbox (badness 4967) in paragraph at lines 40410--40415 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [576] Underfull \hbox (badness 1616) in paragraph at lines 40530--40535 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [577] [578] [579] [580] [581] [582] [583] [584] [585] Underfull \hbox (badness 1472) in paragraph at lines 41077--41080 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [586] [587] [588] [589] [590] [591] [592] [593] [594] [595] [596] [597] [598] Underfull \hbox (badness 10000) in paragraph at lines 42003--42007 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [599] [600] [601] [602] Underfull \hbox (badness 10000) in paragraph at lines 42254--42257 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [603] [604] [605] Underfull \hbox (badness 10000) in paragraph at lines 42438--42442 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [606] [607] [608] [609] [610] [611] [612] [613] Underfull \hbox (badness 10000) in paragraph at lines 43064--43067 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [614] [615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626] Underfull \hbox (badness 1990) in paragraph at lines 43986--43994 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 43986--43994 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [627] [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638] [639] [640] Underfull \hbox (badness 2452) in paragraph at lines 44955--44961 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [641] [642] [643] [644] [645] [646] Underfull \hbox (badness 3668) in paragraph at lines 45353--45355 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [647] Underfull \hbox (badness 2401) in paragraph at lines 45483--45487 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [648] [649] [650] [651] Underfull \hbox (badness 2111) in paragraph at lines 45691--45696 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [652] [653] [654] Underfull \hbox (badness 4001) in paragraph at lines 45937--45939 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [655] [656] [657] [658] [659] Underfull \hbox (badness 5417) in paragraph at lines 46302--46306 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [660] Underfull \hbox (badness 10000) in paragraph at lines 46363--46367 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [661]) (./compiler-pkg.tex [662] Chapter 2. [663] [664] [665] [666]) (./datasets-pkg.tex Chapter 3. [667] [668] [669] [670] [671] [672] Underfull \vbox (badness 1472) has occurred while \output is active [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Overfull \vbox (4.26088pt too high) has occurred while \output is active [704] [705] [706] [707] [708] [709] Overfull \vbox (13.87083pt too high) has occurred while \output is active [710] Underfull \vbox (badness 2376) has occurred while \output is active [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] Overfull \vbox (10.49593pt too high) has occurred while \output is active [727] Overfull \vbox (15.49593pt too high) has occurred while \output is active [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742]) (./grDevices-pkg.tex Chapter 4. [743] [744] [745] [746] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [747] [748] [749] [750] [751] [752] [753] [754] [755] Underfull \hbox (badness 1424) in paragraph at lines 898--900 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [756] [757] [758] [759] [760] Underfull \hbox (badness 5175) in paragraph at lines 1192--1194 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [761] [762] Underfull \hbox (badness 2512) in paragraph at lines 1311--1313 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [763] [764] [765] [766] Underfull \hbox (badness 1490) in paragraph at lines 1611--1616 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1624--1628 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [767] [768] [769] [770] [771] [772] Underfull \hbox (badness 1325) in paragraph at lines 2038--2048 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [773] [774] Underfull \hbox (badness 10000) in paragraph at lines 2150--2152 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [775] [776] Underfull \hbox (badness 6758) in paragraph at lines 2329--2332 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [777] [778] [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] [782] [783] [784] [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2940--2941 Underfull \vbox (badness 10000) has occurred while \output is active [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] Underfull \vbox (badness 10000) has occurred while \output is active [802] Underfull \hbox (badness 10000) in paragraph at lines 4016--4019 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] Underfull \vbox (badness 10000) has occurred while \output is active [814] [815] Underfull \hbox (badness 1584) in paragraph at lines 4907--4909 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 4911--4918 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [816] [817] [818] [819] Underfull \hbox (badness 1377) in paragraph at lines 5217--5222 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [820] Underfull \hbox (badness 1418) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5311--5313 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [821] Underfull \hbox (badness 1377) in paragraph at lines 5422--5427 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [822] Underfull \hbox (badness 7344) in paragraph at lines 5491--5493 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [823] [824] Underfull \hbox (badness 2035) in paragraph at lines 5629--5638 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5629--5638 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5629--5638 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [825] Underfull \hbox (badness 10000) in paragraph at lines 5697--5699 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / Underfull \vbox (badness 10000) has occurred while \output is active [826] [827] [828] Underfull \hbox (badness 1546) in paragraph at lines 5841--5849 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] [836] Underfull \hbox (badness 10000) in paragraph at lines 6379--6382 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [837] [838] [839] [840] [841] [842] [843] [844] [845] [846] [847] [848] Underfull \hbox (badness 1189) in paragraph at lines 7208--7210 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [849] Underfull \hbox (badness 10000) in paragraph at lines 7313--7315 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [850] [851] [852] [853] [854] Underfull \hbox (badness 3780) in paragraph at lines 7627--7633 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [855] [856] [857] [858] [859]) (./graphics-pkg.tex [860] Chapter 5. [861] [862] [863] [864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875] Overfull \hbox (12.71341pt too wide) in paragraph at lines 983--983 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [876] [877] [878] [879] [880] [881] Underfull \hbox (badness 4634) in paragraph at lines 1357--1360 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [882] [883] [884] [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] Underfull \hbox (badness 1728) in paragraph at lines 2335--2337 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [897] Underfull \hbox (badness 1009) in paragraph at lines 2428--2435 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] Underfull \vbox (badness 10000) has occurred while \output is active [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] Underfull \hbox (badness 3229) in paragraph at lines 4652--4657 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [932] [933] [934] [935] [936] Underfull \hbox (badness 1107) in paragraph at lines 5081--5087 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [937] Underfull \hbox (badness 10000) in paragraph at lines 5210--5213 [938] Underfull \hbox (badness 10000) in paragraph at lines 5271--5273 [939 ] [940 ] [941] [942] [943] [944] [945] [946] [947] [948]pdfTeX warning (ext4): destinati on with the same identifier (name{Rfn.plot}) has been already used, duplicate i gnored \relax l.5943 \aliasA{plot}{plot.default}{plot} [949] [950] [951] [952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6848--6849 [][] [963 ] [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] Underfull \hbox (badness 4954) in paragraph at lines 8936--8938 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 8938--8940 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [995]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.unit s}) has been already used, duplicate ignored \relax l.9018 \HeaderA{units}{Graphical Units}{units} [996] [997] [998] [999]) (./grid-pkg.tex [1000] Chapter 6. [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1019] Underfull \vbox (badness 10000) has occurred while \output is active [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) in paragraph at lines 3041--3043 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] Underfull \vbox (badness 10000) has occurred while \output is active [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] Underfull \hbox (badness 1067) in paragraph at lines 4761--4764 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1075] [1076] [1077] [1078] [1079] [1080] Underfull \hbox (badness 7256) in paragraph at lines 5112--5114 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \hbox (badness 2142) in paragraph at lines 5561--5565 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1088] Underfull \hbox (badness 4699) in paragraph at lines 5632--5637 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118]) (./methods-pkg.tex Chapter 7. [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] Underfull \vbox (badness 10000) has occurred while \output is active [1127] Underfull \vbox (badness 10000) has occurred while \output is active [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1145] [1146] [1147] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1153] [1154] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1155] [1156] [1157] [1158] [1159] [1160] [1161] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1162] [1163] [1164] [1165] [1166] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1169] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1178] [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] Underfull \vbox (badness 10000) has occurred while \output is active [1187] Underfull \vbox (badness 10000) has occurred while \output is active [1188] [1189] [1190] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1191] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1192] [1193] [1194] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1203] [1204] [1205] [1206] Underfull \vbox (badness 10000) has occurred while \output is active [1207] [1208] [1209]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1210] [1211] [1212]pdfTeX warning (ext4): desti nation with the same identifier (name{Rfn.Complex}) has been already used, dupl icate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destinat ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) has been already used, duplicate igno red \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination wi th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor ed \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1213] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1214] [1215] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1256] [1257] [1258]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1259] [1260] [1261] [1262] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] Underfull \hbox (badness 3386) in paragraph at lines 1402--1405 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1279] [1280] [1281]) (./splines-pkg.tex [1282] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] [1295] [1296]) (./stats-pkg.tex Chapter 10. [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] Underfull \hbox (badness 1412) in paragraph at lines 887--889 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1310] [1311] [1312] [1313] [1314] [1315] [1316] Underfull \hbox (badness 2503) in paragraph at lines 1369--1372 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] Underfull \hbox (badness 2503) in paragraph at lines 3530--3533 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] Underfull \hbox (badness 3989) in paragraph at lines 4787--4794 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2556) in paragraph at lines 5424--5427 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1377] [1378] [1379] [1380] [1381] [1382] Underfull \hbox (badness 2503) in paragraph at lines 5838--5842 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] Underfull \hbox (badness 7081) in paragraph at lines 6632--6635 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6636--6638 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1395] Underfull \vbox (badness 10000) has occurred while \output is active [1396] [1397] [1398] [1399] Underfull \vbox (badness 10000) has occurred while \output is active [1400] [1401] [1402] [1403] [1404] [1405] [1406] Underfull \hbox (badness 10000) in paragraph at lines 7493--7496 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428] [1429] [1430] [1431] Underfull \hbox (badness 2626) in paragraph at lines 9172--9175 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1432] [1433] Underfull \hbox (badness 2503) in paragraph at lines 9279--9283 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1434] [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] Underfull \hbox (badness 4518) in paragraph at lines 10631--10636 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1453] [1454] [1455] [1456] [1457] Underfull \hbox (badness 2142) in paragraph at lines 10992--10995 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11011--11014 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1458] Underfull \hbox (badness 1708) in paragraph at lines 11073--11077 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1459] [1460] [1461] [1462] [1463] Underfull \hbox (badness 1694) in paragraph at lines 11469--11472 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471]pdfTeX warning (ext4): d estination with the same identifier (name{Rfn.hat}) has been already used, dupl icate ignored \relax l.11950 \aliasA{hat}{influence.measures}{hat} [1472] [1473] Underfull \hbox (badness 1484) in paragraph at lines 12092--12094 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] Underfull \hbox (badness 10000) in paragraph at lines 12694--12696 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1483] [1484] [1485] [1486] [1487] Underfull \hbox (badness 2894) in paragraph at lines 13030--13034 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1488] [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 1496) in paragraph at lines 13444--13450 []\T1/ptm/m/n/10 Gunar Schröer and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1494] [1495] [1496] [1497] [1498] [1499] Underfull \hbox (badness 4518) in paragraph at lines 13842--13847 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] Underfull \hbox (badness 4518) in paragraph at lines 14503--14508 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1510] [1511] Underfull \hbox (badness 6412) in paragraph at lines 14641--14645 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14648--14650 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1512] [1513] [1514] [1515] [1516] [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] Underfull \hbox (badness 2503) in paragraph at lines 15724--15728 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1528] [1529] [1530] [1531] [1532] [1533] [1534] [1535] Underfull \hbox (badness 10000) in paragraph at lines 16237--16243 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16237--16243 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] Underfull \hbox (badness 1158) in paragraph at lines 17888--17891 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1560] [1561] Underfull \vbox (badness 10000) has occurred while \output is active [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] Underfull \hbox (badness 1377) in paragraph at lines 18915--18920 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on [1575] Underfull \hbox (badness 1735) in paragraph at lines 18920--18923 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18933--18937 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18933--18937 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 18941--18945 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1576] [1577] [1578] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19166--19166 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19169--19169 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1579] [1580] [1581] [1582] [1583] [1584] [1585] Underfull \hbox (badness 1337) in paragraph at lines 19628--19631 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1586] [1587] [1588] [1589] [1590] [1591] [1592] [1593] Underfull \hbox (badness 10000) in paragraph at lines 20099--20105 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1594] [1595] [1596] [1597] [1598] Underfull \hbox (badness 1194) in paragraph at lines 20429--20432 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1599] [1600] [1601] [1602] [1603] [1604] Underfull \hbox (badness 2503) in paragraph at lines 20808--20811 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1605] Underfull \hbox (badness 3919) in paragraph at lines 20835--20837 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1606] [1607] [1608] [1609] [1610] [1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621] Underfull \hbox (badness 10000) in paragraph at lines 21913--21919 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1622] [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 1337) in paragraph at lines 23270--23276 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1643] [1644] [1645] [1646] [1647] [1648] [1649] Underfull \hbox (badness 1436) in paragraph at lines 23695--23698 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1650] [1651] Underfull \hbox (badness 10000) in paragraph at lines 23836--23837 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1652] [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] Underfull \hbox (badness 1824) in paragraph at lines 24808--24814 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24808--24814 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 24829--24832 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] Underfull \hbox (badness 2165) in paragraph at lines 25410--25415 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1675] [1676] [1677] [1678] Underfull \hbox (badness 1867) in paragraph at lines 25619--25621 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25634--25638 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] Underfull \vbox (badness 10000) has occurred while \output is active [1702] Underfull \hbox (badness 3514) in paragraph at lines 27282--27287 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1703] [1704] [1705] [1706] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27516--27516 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1707] Underfull \hbox (badness 3514) in paragraph at lines 27552--27558 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1708] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27609--27609 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27611--27611 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1709] [1710] Underfull \hbox (badness 3514) in paragraph at lines 27785--27790 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1711] [1712] Underfull \hbox (badness 3514) in paragraph at lines 27872--27877 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1713] Underfull \hbox (badness 3514) in paragraph at lines 27937--27942 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1714] Underfull \hbox (badness 3514) in paragraph at lines 28031--28036 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1715] [1716] Underfull \hbox (badness 6691) in paragraph at lines 28123--28128 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] Underfull \hbox (badness 4024) in paragraph at lines 28614--28617 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1725] [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] Underfull \hbox (badness 5431) in paragraph at lines 29220--29222 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1734] [1735] [1736] [1737] Underfull \hbox (badness 5431) in paragraph at lines 29430--29433 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1738] [1739] [1740] [1741] [1742] Underfull \hbox (badness 1337) in paragraph at lines 29745--29749 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1743] [1744] [1745] [1746] Underfull \hbox (badness 1616) in paragraph at lines 30057--30060 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1747] [1748] [1749] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 3557) in paragraph at lines 31192--31196 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1765] [1766] Underfull \vbox (badness 10000) has occurred while \output is active [1767] [1768] [1769] Underfull \hbox (badness 1337) in paragraph at lines 31556--31560 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1770] [1771] [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 1337) in paragraph at lines 32085--32089 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1778] [1779] [1780] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32292--32292 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1781] [1782] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32453--32453 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1783] [1784] [1785] [1786] [1787]) (./stats4-pkg.tex [1788] Chapter 11. [1789] [1790] [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] [1793] [1794] [1795] [1796]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.show.Rdash.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1797] [1798] [1799]) (./tcltk-pkg.tex [1800] Chapter 12. [1801] [1802] [1803] [1804] [1805] [1806] [1807] Underfull \vbox (badness 10000) has occurred while \output is active [1808] Underfull \hbox (badness 1546) in paragraph at lines 666--673 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820]) (./tools-pkg.tex Chapter 13. [1821] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1822] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1823] [1824] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1825] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1826] [1827] Underfull \hbox (badness 1142) in paragraph at lines 463--467 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1828] [1829] [1830] [1831] [1832] Overfull \vbox (7.18602pt too high) has occurred while \output is active [1833] [1834] [1835] [1836] [1837] [1838] Underfull \hbox (badness 1014) in paragraph at lines 1174--1176 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1180--1182 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous Underfull \hbox (badness 10000) in paragraph at lines 1217--1220 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1217--1220 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1839] [1840] [1841] [1842] [1843] Underfull \hbox (badness 2293) in paragraph at lines 1569--1571 []\T1/zi4/m/n/10 CRAN_memtest_notes() []\T1/ptm/m/n/10 is now dep-re-cated, wit h its func-tion-al-ity in-te-grated into that of [1844] Underfull \hbox (badness 10000) in paragraph at lines 1595--1598 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1845] [1846] Underfull \hbox (badness 4096) in paragraph at lines 1714--1722 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1724--1726 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1847] [1848] [1849]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1926 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ig nored \relax l.1927 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1850] [1851] [1852] [1853] Overfull \hbox (17.27782pt too wide) in paragraph at lines 2229--2229 []\T1/zi4/m/n/9 writeLines(paste0("\\newcommand{\\logo}{\\if{html}{\\figure{Rl ogo.svg}{options: width=100}",[] [1854] [1855] [1856] Underfull \hbox (badness 4096) in paragraph at lines 2398--2406 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1857] [1858] [1859] [1860] [1861] [1862] [1863] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2892. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. [1864] [1865] [1866] [1867] Underfull \hbox (badness 1424) in paragraph at lines 3195--3197 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] Underfull \hbox (badness 10000) in paragraph at lines 3897--3899 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 4036--4039 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1881] Underfull \hbox (badness 1137) in paragraph at lines 4138--4140 []\T1/ptm/m/n/10 a ma-trix spec-i-fy-ing all pack-ages in-stalled on the lo-cal sys-tem, as from [1882] [1883] [1884] [1885] [1886] Underfull \hbox (badness 1796) in paragraph at lines 4446--4451 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1887] Underfull \hbox (badness 4699) in paragraph at lines 4496--4500 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4496--4500 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from Underfull \hbox (badness 1838) in paragraph at lines 4524--4530 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4524--4530 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1888] [1889] [1890] [1891] Underfull \hbox (badness 2197) in paragraph at lines 4799--4809 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1892] Underfull \hbox (badness 1571) in paragraph at lines 4865--4869 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1893] [1894] [1895]) (./utils-pkg.tex [1896] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] Underfull \hbox (badness 10000) in paragraph at lines 726--732 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 726--732 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1907] [1908] [1909] Underfull \hbox (badness 3861) in paragraph at lines 931--936 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1910] [1911] [1912] Underfull \hbox (badness 3323) in paragraph at lines 1115--1123 []\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use []\T1/zi4/m/it /10 bibtex = T|F []\T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m $\T1/ptm/m/n/10 , in-di-cat- Underfull \hbox (badness 2961) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f or-mat- Underfull \hbox (badness 3919) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is Underfull \hbox (badness 2875) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 taken as [][][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex. max", 1) []\T1/ptm/m/n/10 which is []\T1/zi4/m/it/10 1 []\T1/ptm/m/n/10 typ-i-c ally. Underfull \hbox (badness 1817) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f ault by Underfull \hbox (badness 10000) in paragraph at lines 1127--1129 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 1371) in paragraph at lines 1637--1639 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1920] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1707. [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 2057) in paragraph at lines 2358--2360 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1930] [1931] [1932] [1933] [1934]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.clipboard}) has been already used, duplicate ignored \relax l.2710 ... the Clipboard in MS Windows}{clipboard} [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] Underfull \hbox (badness 6842) in paragraph at lines 4007--4012 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1954] Underfull \hbox (badness 1430) in paragraph at lines 4070--4078 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1955] [1956] Underfull \hbox (badness 10000) in paragraph at lines 4275--4277 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1957] [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.for mat}) has been already used, duplicate ignored \relax l.5044 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.format.1}) has been already used, dupl icate ignored \relax l.5044 ...mat Unordered and Ordered Lists}{format} [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 1622) in paragraph at lines 5567--5571 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [1977] [1978] [1979] [1980] [1981] [1982] Underfull \hbox (badness 1448) in paragraph at lines 5946--5951 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [1983] [1984] [1985] [1986] [1987] [1988] [1989] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6492. [1990] Underfull \hbox (badness 1371) in paragraph at lines 6496--6498 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1991] Underfull \hbox (badness 1502) in paragraph at lines 6585--6590 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6585--6590 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [1992] [1993] Underfull \hbox (badness 10000) in paragraph at lines 6758--6767 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [1994] Underfull \hbox (badness 2150) in paragraph at lines 6822--6825 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [1995] [1996] Underfull \hbox (badness 3118) in paragraph at lines 6961--6963 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [1997] [1998] Underfull \hbox (badness 1325) in paragraph at lines 7140--7144 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [1999] Underfull \hbox (badness 1424) in paragraph at lines 7232--7235 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2000] Underfull \hbox (badness 3219) in paragraph at lines 7303--7310 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7303--7310 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7303--7310 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7303--7310 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7311--7314 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2001] [2002] Underfull \hbox (badness 1024) in paragraph at lines 7438--7441 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7471--7476 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] [2013] Underfull \hbox (badness 10000) in paragraph at lines 8175--8177 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2014] [2015] [2016] [2017] [2018] [2019] [2020] [2021] [2022] [2023] [2024] [2025] Underfull \hbox (badness 2310) in paragraph at lines 8935--8940 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2026] [2027] [2028] [2029] [2030] [2031] [2032] Underfull \hbox (badness 1248) in paragraph at lines 9461--9465 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2033] Underfull \hbox (badness 1789) in paragraph at lines 9541--9543 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2034] [2035] [2036] [2037] [2038] [2039] [2040] [2041] [2042] Underfull \vbox (badness 5533) has occurred while \output is active [2043] [2044] [2045] Underfull \hbox (badness 1097) in paragraph at lines 10378--10381 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2046] [2047] Underfull \hbox (badness 3000) in paragraph at lines 10514--10519 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 2134) in paragraph at lines 11103--11108 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2056] Underfull \hbox (badness 10000) in paragraph at lines 11159--11164 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11159--11164 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \hbox (badness 2469) in paragraph at lines 11653--11657 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11653--11657 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 4060) in paragraph at lines 12077--12080 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2070] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12100--12100 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2071] [2072] [2073] Underfull \hbox (badness 2150) in paragraph at lines 12355--12357 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2074] [2075] [2076] [2077] Underfull \hbox (badness 10000) in paragraph at lines 12575--12579 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12608--12614 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12623--12631 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). 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If [2080] Underfull \hbox (badness 4779) in paragraph at lines 12842--12844 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 12872--12879 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2081] [2082] [2083] [2084] [2085] [2086] Underfull \hbox (badness 3780) in paragraph at lines 13280--13284 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13296--13299 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2087] [2088] [2089] Underfull \hbox (badness 2302) in paragraph at lines 13501--13503 []\T1/ptm/m/n/10 Convert file paths to the short form. 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Ob- [2102] [2103] Underfull \hbox (badness 1460) in paragraph at lines 14407--14415 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2104] [2105] Underfull \hbox (badness 6510) in paragraph at lines 14557--14561 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14564--14567 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14564--14567 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2106] [2107] [2108] [2109] [2110] [2111] [2112] [2113] [2114] Underfull \hbox (badness 10000) in paragraph at lines 15233--15238 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15233--15238 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15239--15241 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2115] Underfull \hbox (badness 10000) in paragraph at lines 15298--15301 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129] [2130]) [2131] [2132] (./KernSmooth-pkg.tex Chapter 15. [2133] [2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]) (./MASS-pkg.tex Chapter 16. [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] Underfull \hbox (badness 10000) in paragraph at lines 2879--2884 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2183] [2184] Underfull \hbox (badness 4686) in paragraph at lines 3047--3049 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] [2209] Underfull \hbox (badness 1117) in paragraph at lines 4808--4811 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2210] Underfull \hbox (badness 1117) in paragraph at lines 4886--4889 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6152 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.npk.1}) has been already used, duplica te ignored \relax l.6152 ...sical N, P, K Factorial Experiment}{npk} [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 1117) in paragraph at lines 7123--7130 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2241] Underfull \hbox (badness 3138) in paragraph at lines 7194--7200 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2242] [2243] [2244] Underfull \hbox (badness 1910) in paragraph at lines 7373--7376 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] Underfull \hbox (badness 4686) in paragraph at lines 8006--8008 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 41--44 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 41--44 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2291] Underfull \hbox (badness 1769) in paragraph at lines 95--98 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2292] [2293] [2294] [2295] Underfull \hbox (badness 5119) in paragraph at lines 514--518 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2296] [2297] Underfull \hbox (badness 2035) in paragraph at lines 610--613 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2298] [2299] Underfull \hbox (badness 1701) in paragraph at lines 763--767 []\T1/ptm/m/n/10 The orig-i-nal LA-PACK source code, in-clud-ing doc-u-men-ta-t ion; [][]$\T1/zi4/m/it/10 https : / / www . netlib . org / [2300] [2301] Underfull \hbox (badness 1521) in paragraph at lines 882--887 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 882--887 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 882--887 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2302] [2303] Underfull \hbox (badness 10000) in paragraph at lines 1061--1063 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2304] [2305]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.chol}) has been already used, duplicate ignored \relax l.1173 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.chol.1}) has been already used, duplic ate ignored \relax l.1173 ...- 'Matrix' S4 Generic and Methods}{chol} [2306] [2307] [2308] Underfull \hbox (badness 2277) in paragraph at lines 1428--1431 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2309] [2310] Underfull \hbox (badness 1097) in paragraph at lines 1600--1603 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1606--1610 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend [2311]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.col Sums}) has been already used, duplicate ignored \relax l.1663 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colSums.1}) has been already used, dup licate ignored \relax l.1663 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colMeans}) has been already used, dupl icate ignored \relax l.1664 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowMeans}) has been already used, duplicate i gnored \relax l.1685 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowSums}) has been already used, duplicate ig nored \relax l.1696 \aliasA{rowSums}{colSums}{rowSums} [2312] [2313] [2314] Underfull \hbox (badness 3547) in paragraph at lines 1915--1918 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2315] [2316] [2317] [2318] [2319] [2320] [2321] [2322] [2323] Underfull \hbox (badness 2717) in paragraph at lines 2654--2658 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2324] [2325] Underfull \hbox (badness 6842) in paragraph at lines 2744--2747 []\T1/zi4/m/it/10 Diagonal() []\T1/ptm/m/n/10 re-turns an ob-ject of class [][] []\T1/zi4/m/it/10 ddiMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 ldi Matrix[][][] []\T1/ptm/m/n/10 (with ``su-per-class'' [2326] Underfull \hbox (badness 8019) in paragraph at lines 3028--3030 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 3031--3035 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2327] [2328] [2329] Underfull \hbox (badness 1902) in paragraph at lines 3288--3290 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2330] Underfull \hbox (badness 2020) in paragraph at lines 3322--3325 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2331] [2332] [2333] Underfull \hbox (badness 1354) in paragraph at lines 3593--3596 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2334] [2335] [2336] [2337] [2338] Underfull \hbox (badness 4518) in paragraph at lines 4000--4003 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 4003--4006 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2339] [2340] Underfull \hbox (badness 2318) in paragraph at lines 4127--4131 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2341] Underfull \hbox (badness 3240) in paragraph at lines 4260--4264 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2342] [2343] [2344] [2345] [2346] [2347] [2348] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4693--4693 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4700--4700 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2349] [2350] [2351] Underfull \hbox (badness 1931) in paragraph at lines 4932--4934 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2352] [2353] [2354] [2355] Underfull \hbox (badness 1005) in paragraph at lines 5238--5243 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5238--5243 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 5257--5260 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2356] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5305--5305 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2357] Underfull \hbox (badness 3229) in paragraph at lines 5406--5415 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the [2358] Underfull \hbox (badness 10000) in paragraph at lines 5448--5450 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5453--5456 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low Underfull \hbox (badness 10000) in paragraph at lines 5463--5466 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2359] [2360] [2361] [2362] [2363] Underfull \hbox (badness 1014) in paragraph at lines 5842--5845 []\T1/zi4/m/it/10 isTriangular(M) []\T1/ptm/m/n/10 re-turns a [][][]\T1/zi4/m/i t/10 logical[][][] []\T1/ptm/m/n/10 in-di-cat-ing if []\T1/zi4/m/it/10 M []\T1/ ptm/m/n/10 is a tri-an-gu-lar ma-trix. Anal-o-gously, [2364] [2365] [2366] [2367] [2368] Underfull \hbox (badness 2478) in paragraph at lines 6269--6274 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class [2369] Underfull \hbox (badness 10000) in paragraph at lines 6277--6280 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2370] [2371] Underfull \hbox (badness 10000) in paragraph at lines 6564--6567 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2372] Underfull \hbox (badness 10000) in paragraph at lines 6636--6639 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2373] Underfull \hbox (badness 2050) in paragraph at lines 6712--6715 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2374] [2375] [2376] [2377] [2378] [2379]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7124 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7217--7219 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode [2380] Underfull \hbox (badness 4846) in paragraph at lines 7222--7225 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7227--7230 [2381]pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rp cent.*.Rpcent.}) has been already used, duplicate ignored \relax l.7300 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.crossprod}) has been already used, dup licate ignored \relax l.7410 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.tcrossprod}) has been already used, du plicate ignored \relax l.7513 ...tcrossprod}{matrix-products}{tcrossprod} [2382] Underfull \hbox (badness 10000) in paragraph at lines 7690--7695 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7690--7695 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7699--7701 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7701--7703 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2383] [2384] Underfull \hbox (badness 1430) in paragraph at lines 7849--7854 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2385] [2386] Underfull \hbox (badness 10000) in paragraph at lines 7975--7977 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2387] [2388] Underfull \vbox (badness 10000) has occurred while \output is active [2389] Underfull \hbox (badness 2478) in paragraph at lines 8183--8188 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8191--8194 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2390] [2391] Underfull \hbox (badness 5924) in paragraph at lines 8385--8387 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2392]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.nor m}) has been already used, duplicate ignored \relax l.8425 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignor ed \relax l.8425 \HeaderA{norm}{Matrix Norms}{norm} [2393] [2394] [2395] Underfull \hbox (badness 10000) in paragraph at lines 8787--8790 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2396] Underfull \hbox (badness 10000) in paragraph at lines 8862--8865 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2397] Underfull \hbox (badness 1014) in paragraph at lines 8947--8953 []\T1/ptm/m/n/10 It is used to de-fine com-mon meth-ods for ef-fi-cient sub-set -ting, trans-pos-ing etc for the \T1/ptm/m/it/10 ac- [2398] [2399] Underfull \hbox (badness 10000) in paragraph at lines 9111--9113 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2400] [2401] [2402] [2403]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9348 \aliasA{qr}{qr-methods}{qr} [2404] [2405] Underfull \hbox (badness 7186) in paragraph at lines 9517--9523 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2406] [2407] [2408]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) has been already used, duplicate ignored \relax l.9674 ... the Reciprocal Condition Number}{rcond} [2409] [2410] [2411] [2412] Underfull \hbox (badness 2351) in paragraph at lines 9978--9986 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 9978--9986 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2413] [2414] [2415] [2416]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.solve}) has been already used, duplicate ignored \relax l.10254 \aliasA{solve}{solve-methods}{solve} [2417] [2418] Underfull \hbox (badness 4403) in paragraph at lines 10480--10483 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2419] Underfull \hbox (badness 10000) in paragraph at lines 10550--10553 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10586--10589 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10597--10601 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2420] [2421] [2422] [2423] [2424] [2425] [2426] [2427] Underfull \hbox (badness 10000) in paragraph at lines 11174--11182 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11174--11182 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11199--11207 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11199--11207 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2428]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr. Q}) has been already used, duplicate ignored \relax l.11265 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2429] [2430] Underfull \hbox (badness 5036) in paragraph at lines 11451--11453 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2431] [2432] Underfull \hbox (badness 2828) in paragraph at lines 11636--11639 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11658--11661 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2433] Underfull \vbox (badness 10000) has occurred while \output is active [2434] [2435] [2436] [2437] Underfull \hbox (badness 2057) in paragraph at lines 12007--12009 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2438] [2439] Underfull \hbox (badness 10000) in paragraph at lines 12176--12181 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12182--12188 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2440] Underfull \hbox (badness 1902) in paragraph at lines 12217--12221 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2441] [2442] [2443] [2444] [2445] [2446] [2447] Underfull \hbox (badness 6910) in paragraph at lines 12816--12818 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2448] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12863. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12863. [2449] [2450]) (./boot-pkg.tex Chapter 18. [2451] [2452] [2453] [2454] [2455] [2456] [2457] [2458] [2459] [2460] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2461] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2462] Underfull \vbox (badness 10000) has occurred while \output is active [2463] [2464] [2465] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2466] [2467] [2468] [2469] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2470] [2471] [2472] [2473] [2474] [2475] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2476] [2477] Underfull \vbox (badness 10000) has occurred while \output is active [2478] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2479] [2480] [2481] [2482] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2483] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2484] [2485] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2486] [2487] [2488] [2489] [2490] [2491] [2492] [2493] [2494] [2495] [2496] [2497] [2498] [2499] [2500] [2501] [2502] [2503] [2504] [2505] [2506] [2507] [2508] [2509] [2510] [2511] [2512] [2513] [2514] [2515] [2516] [2517] [2518] [2519] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2520] [2521] [2522] [2523] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2524] [2525] [2526] [2527] [2528] [2529] [2530] [2531] [2532] [2533] [2534] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2535] [2536] [2537] [2538] [2539] [2540] [2541] [2542] [2543] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2544] [2545] [2546] [2547] [2548] [2549] [2550] [2551] [2552] [2553]) (./class-pkg.tex [2554] Chapter 19. [2555] [2556] [2557] [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570]) (./cluster-pkg.tex Chapter 20. [2571] [2572] [2573] [2574] [2575] Underfull \vbox (badness 7777) has occurred while \output is active [2576] [2577] [2578] [2579] [2580] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2581] [2582] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2583] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2584] [2585] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2586] [2587] [2588] [2589] [2590] [2591] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2592] [2593] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2594] [2595] [2596] [2597] [2598] [2599] [2600] [2601] Underfull \hbox (badness 10000) in paragraph at lines 2183--2186 Underfull \hbox (badness 10000) in paragraph at lines 2197--2203 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2602] [2603] [2604] [2605] Underfull \hbox (badness 6675) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2606] [2607] [2608] [2609] [2610] [2611] [2612] Underfull \hbox (badness 2980) in paragraph at lines 2962--2966 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2613] [2614] [2615] [2616] [2617] [2618] Underfull \hbox (badness 1142) in paragraph at lines 3303--3306 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2619] [2620] Underfull \hbox (badness 1142) in paragraph at lines 3422--3425 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2621] [2622] [2623] Underfull \hbox (badness 2582) in paragraph at lines 3645--3650 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2624] Underfull \hbox (badness 2698) in paragraph at lines 3707--3712 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3707--3712 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2625] [2626] [2627] [2628] [2629] Underfull \hbox (badness 10000) in paragraph at lines 3999--4001 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2630] [2631] [2632] [2633] Underfull \hbox (badness 2626) in paragraph at lines 4228--4233 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2634] Underfull \hbox (badness 1383) in paragraph at lines 4306--4311 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2635] [2636] [2637] [2638] [2639] [2640] [2641] Underfull \hbox (badness 10000) in paragraph at lines 4750--4752 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2642] [2643]) (./codetools-pkg.tex [2644] Chapter 21. [2645] [2646] [2647] [2648] [2649]) (./foreign-pkg.tex [2650] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2651] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2652] [2653] [2654] [2655] [2656] [2657] [2658] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, Underfull \hbox (badness 7133) in paragraph at lines 550--558 []\T1/ptm/m/n/10 URL [][]$\T1/zi4/m/it/10 https : / / docs . microsoft . com / en-[]us / windows / win32 / intl / code-[]page-[]identifiers$[][] [2659] Overfull \hbox (6.73795pt too wide) in paragraph at lines 624--624 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2660] [2661] [2662] Underfull \hbox (badness 10000) in paragraph at lines 812--813 [2663] Underfull \hbox (badness 10000) in paragraph at lines 869--873 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2664] [2665] Underfull \hbox (badness 10000) in paragraph at lines 990--992 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2666] [2667] [2668] [2669] Underfull \hbox (badness 10000) in paragraph at lines 1270--1276 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2670] [2671]) (./lattice-pkg.tex [2672] Chapter 23. [2673] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2674] [2675] [2676] [2677] [2678] [2679] [2680] [2681] [2682] [2683] [2684] [2685] [2686] [2687] [2688] Underfull \hbox (badness 1062) in paragraph at lines 1398--1402 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2689] Underfull \vbox (badness 4416) has occurred while \output is active [2690] Underfull \hbox (badness 1803) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2691] [2692] [2693] Underfull \hbox (badness 3009) in paragraph at lines 1725--1727 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1755--1759 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2694] [2695] [2696] [2697] [2698] Underfull \hbox (badness 10000) in paragraph at lines 2141--2144 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2699] [2700] [2701] [2702] [2703] [2704] [2705] [2706] [2707] [2708] Underfull \hbox (badness 2781) in paragraph at lines 2849--2851 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2709] [2710] Underfull \hbox (badness 2486) in paragraph at lines 3001--3005 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2711] [2712] [2713] [2714] [2715] [2716]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.parallel}) has been already used, duplicate ign ored \relax l.3475 \aliasA{parallel}{B\_08\_splom}{parallel} [2717] [2718] [2719] [2720] [2721] [2722] [2723] [2724] Underfull \hbox (badness 5696) in paragraph at lines 3970--3974 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2725] Underfull \hbox (badness 1173) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in [2726] Underfull \hbox (badness 3219) in paragraph at lines 4136--4138 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2727] [2728] Underfull \hbox (badness 3492) in paragraph at lines 4336--4346 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , [2729] Underfull \hbox (badness 10000) in paragraph at lines 4361--4364 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4364--4366 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2730] [2731] [2732] [2733] [2734] [2735] [2736] [2737] [2738] Underfull \hbox (badness 6157) in paragraph at lines 5087--5090 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2739] [2740] [2741] [2742] [2743] [2744] [2745] Underfull \hbox (badness 10000) in paragraph at lines 5545--5548 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5545--5548 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2746] [2747] [2748] [2749] [2750] Underfull \hbox (badness 4805) in paragraph at lines 5907--5911 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 5918--5925 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 5918--5925 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 5918--5925 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2751] [2752] [2753] [2754] Underfull \hbox (badness 4242) in paragraph at lines 6218--6223 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6218--6223 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2755] [2756] Underfull \hbox (badness 2310) in paragraph at lines 6334--6339 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2757] [2758] [2759] [2760] [2761] [2762] [2763] [2764] [2765] [2766] [2767] Underfull \hbox (badness 3168) in paragraph at lines 7116--7120 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2768] [2769] [2770] [2771] Underfull \hbox (badness 2012) in paragraph at lines 7387--7390 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2772] [2773] Underfull \hbox (badness 3333) in paragraph at lines 7559--7561 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing [2774] [2775] [2776] Underfull \vbox (badness 10000) has occurred while \output is active [2777] [2778] [2779] Underfull \hbox (badness 1436) in paragraph at lines 7973--7979 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2780] [2781] [2782] [2783] [2784] [2785] [2786] [2787] Underfull \hbox (badness 10000) in paragraph at lines 8531--8534 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2788] Underfull \hbox (badness 1092) in paragraph at lines 8577--8579 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2789] [2790] Underfull \hbox (badness 3895) in paragraph at lines 8738--8741 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2791] Underfull \hbox (badness 1515) in paragraph at lines 8814--8818 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2792] [2793] Underfull \hbox (badness 6316) in paragraph at lines 8920--8925 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 8937--8940 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2794] [2795] [2796] [2797] Underfull \hbox (badness 1728) in paragraph at lines 9228--9232 []\T1/ptm/m/n/10 Returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2798] [2799] [2800] [2801] [2802] [2803] [2804] Underfull \hbox (badness 2310) in paragraph at lines 9692--9696 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9697--9700 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2805] [2806] [2807]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma}) has been already used, duplicate ignored \relax l.9923 \aliasA{melanoma}{H\_melanoma}{melanoma} [2808] [2809] [2810] Underfull \hbox (badness 4144) in paragraph at lines 10147--10150 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10147--10150 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2811] [2812]) (./mgcv-pkg.tex Chapter 24. [2813] [2814] [2815] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2816] [2817] [2818] [2819] Underfull \hbox (badness 10000) in paragraph at lines 378--385 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 378--385 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2820] [2821] [2822] [2823] [2824] Underfull \hbox (badness 1406) in paragraph at lines 703--704 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2825] [2826] [2827] Underfull \hbox (badness 1158) in paragraph at lines 813--815 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion Underfull \hbox (badness 1259) in paragraph at lines 876--877 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2828] [2829] [2830] [2831] [2832] Underfull \hbox (badness 1281) in paragraph at lines 1160--1161 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2833] [2834] Underfull \vbox (badness 10000) has occurred while \output is active [2835] Underfull \vbox (badness 10000) has occurred while \output is active [2836] [2837] Underfull \vbox (badness 10000) has occurred while \output is active [2838] [2839] [2840] [2841] [2842] [2843] [2844] [2845] [2846] [2847] [2848] [2849] [2850] [2851] [2852] [2853] Underfull \hbox (badness 1142) in paragraph at lines 2361--2365 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 2387--2392 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2854] [2855] [2856] [2857] [2858] [2859] Underfull \vbox (badness 10000) has occurred while \output is active [2860] Underfull \vbox (badness 10000) has occurred while \output is active [2861] [2862] [2863] [2864] [2865] [2866] [2867] [2868] [2869] [2870] [2871] [2872] [2873] [2874] [2875] [2876] [2877] Underfull \hbox (badness 10000) in paragraph at lines 3822--3826 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2878] [2879] Underfull \vbox (badness 10000) has occurred while \output is active [2880] [2881] [2882] Underfull \hbox (badness 1184) in paragraph at lines 4108--4112 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2883] [2884] [2885] [2886] [2887] [2888] [2889] [2890] [2891] [2892] [2893] [2894] Underfull \hbox (badness 1142) in paragraph at lines 4829--4833 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2895] Underfull \hbox (badness 1231) in paragraph at lines 4933--4935 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2896] [2897] [2898] Underfull \vbox (badness 10000) has occurred while \output is active [2899] [2900] [2901] [2902] Underfull \hbox (badness 2181) in paragraph at lines 5377--5378 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2903] [2904] [2905] [2906] [2907] [2908] [2909] Underfull \hbox (badness 10000) in paragraph at lines 5766--5767 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2910] [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] Underfull \hbox (badness 1142) in paragraph at lines 6351--6355 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2921] [2922] [2923] Underfull \vbox (badness 10000) has occurred while \output is active [2924] [2925] [2926] [2927] Underfull \hbox (badness 1087) in paragraph at lines 6723--6724 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2928] [2929] Underfull \vbox (badness 10000) has occurred while \output is active [2930] Underfull \vbox (badness 10000) has occurred while \output is active [2931] [2932] [2933] [2934] [2935] [2936] [2937] [2938] [2939] [2940] [2941] [2942] [2943] Underfull \hbox (badness 1242) in paragraph at lines 7672--7673 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] [2953] [2954] Underfull \hbox (badness 6001) in paragraph at lines 8312--8314 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] [2964] Underfull \vbox (badness 10000) has occurred while \output is active [2965] [2966] Underfull \hbox (badness 1038) in paragraph at lines 9061--9064 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9061--9064 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [2967] Underfull \hbox (badness 10000) in paragraph at lines 9117--9120 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [2968] [2969] [2970] [2971] [2972] [2973] [2974] [2975] [2976] [2977] [2978] Underfull \hbox (badness 1852) in paragraph at lines 9790--9793 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2979] [2980] [2981] Underfull \hbox (badness 1852) in paragraph at lines 9959--9962 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2982] [2983] Underfull \vbox (badness 10000) has occurred while \output is active [2984] [2985] Underfull \hbox (badness 1205) in paragraph at lines 10191--10193 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10191--10193 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10197--10202 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [2986] Underfull \hbox (badness 1205) in paragraph at lines 10281--10283 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10281--10283 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [2987] [2988] [2989] Underfull \hbox (badness 1253) in paragraph at lines 10480--10482 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [2990] [2991] [2992] [2993] [2994] [2995] Underfull \hbox (badness 4792) in paragraph at lines 10741--10744 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10741--10744 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [2996] Underfull \hbox (badness 10000) in paragraph at lines 10848--10851 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [2997] [2998] [2999] [3000] [3001] [3002] [3003] [3004] [3005] [3006] [3007] [3008] [3009] Underfull \vbox (badness 10000) has occurred while \output is active [3010] Underfull \hbox (badness 3861) in paragraph at lines 11637--11640 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3011] [3012] Underfull \hbox (badness 1320) in paragraph at lines 11752--11757 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3013] Underfull \hbox (badness 1975) in paragraph at lines 11858--11863 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3014] [3015] Underfull \hbox (badness 1762) in paragraph at lines 11947--11959 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3016] [3017] [3018] Underfull \hbox (badness 7667) in paragraph at lines 12159--12165 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3019] Underfull \hbox (badness 10000) in paragraph at lines 12200--12201 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3020] [3021] [3022] [3023] Underfull \vbox (badness 10000) has occurred while \output is active [3024] Underfull \hbox (badness 10000) in paragraph at lines 12477--12479 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3025] [3026] Underfull \hbox (badness 10000) in paragraph at lines 12607--12608 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3027] [3028] [3029] Underfull \hbox (badness 1436) in paragraph at lines 12745--12752 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3030] [3031] Underfull \hbox (badness 10000) in paragraph at lines 12840--12841 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3032] [3033] [3034] [3035] [3036] [3037] [3038] [3039] [3040] [3041] Underfull \hbox (badness 10000) in paragraph at lines 13441--13447 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13441--13447 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3042] [3043] [3044] Underfull \vbox (badness 10000) has occurred while \output is active [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] [3047] Underfull \hbox (badness 10000) in paragraph at lines 13784--13785 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3048] [3049] [3050] [3051] Underfull \hbox (badness 3895) in paragraph at lines 14044--14047 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3052] Underfull \hbox (badness 10000) in paragraph at lines 14089--14091 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3053] [3054] [3055] [3056] [3057] Underfull \hbox (badness 1371) in paragraph at lines 14363--14369 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3058] [3059] [3060] [3061] Underfull \hbox (badness 2326) in paragraph at lines 14608--14615 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3062] Underfull \hbox (badness 2158) in paragraph at lines 14693--14693 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3063] [3064] [3065] [3066] [3067] [3068] [3069] [3070] [3071] [3072] [3073] [3074] [3075] [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] Underfull \hbox (badness 1796) in paragraph at lines 16342--16345 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3091] [3092] [3093] [3094] [3095] [3096] [3097] [3098] [3099]) (./nlme-pkg.tex [3100] Chapter 25. [3101] [3102] [3103] [3104] [3105] [3106] [3107] [3108] [3109] [3110] [3111] [3112] [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] Underfull \hbox (badness 10000) in paragraph at lines 2258--2264 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3135] [3136] [3137] [3138] [3139] [3140] [3141] [3142] [3143] [3144] [3145] [3146] [3147] [3148] [3149pdfTeX warning (ext4): destination with the same iden tifier (name{Rfn.corMatrix.corCompSymm}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.3194 ] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] Underfull \hbox (badness 1067) in paragraph at lines 4419--4424 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] Underfull \hbox (badness 10000) in paragraph at lines 5165--5169 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3180] [3181] [3182] [3183] [3184] [3185] [3186] Underfull \hbox (badness 10000) in paragraph at lines 5597--5600 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3187] [3188] [3189] [3190] [3191] [3192] [3193] Underfull \hbox (badness 10000) in paragraph at lines 5978--5983 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3194] [3195] [3196] [3197] Underfull \hbox (badness 1490) in paragraph at lines 6248--6259 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3198] Underfull \hbox (badness 10000) in paragraph at lines 6312--6314 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3199] [3200] [3201] [3202] [3203] [3204] Underfull \hbox (badness 10000) in paragraph at lines 6725--6727 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3205] [3206] [3207] [3208] Underfull \hbox (badness 10000) in paragraph at lines 6997--7004 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3209] [3210] [3211] [3212] Underfull \hbox (badness 10000) in paragraph at lines 7257--7262 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3213] [3214] [3215] [3216] [3217] [3218] [3219] [3220] [3221] [3222] [3223] [3224] [3225] [3226] [3227] [3228] [3229] [3230] [3231] Underfull \hbox (badness 10000) in paragraph at lines 8525--8527 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3232] [3233] [3234] [3235] [3236] Underfull \hbox (badness 10000) in paragraph at lines 8804--8811 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3237] [3238] [3239] [3240] [3241] [3242] [3243] [3244] Underfull \hbox (badness 10000) in paragraph at lines 9326--9333 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3245] [3246] [3247] [3248] [3249]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9688 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.Matrix.1}) has been already used, dupl icate ignored \relax l.9688 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3250] [3251] [3252] [3253] [3254] [3255] [3256] [3257] [3258] [3259] [3260] [3261] Underfull \hbox (badness 1596) in paragraph at lines 10461--10487 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3262] [3263] Underfull \hbox (badness 1490) in paragraph at lines 10599--10605 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3264] [3265] [3266] [3267] Underfull \hbox (badness 10000) in paragraph at lines 10840--10842 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3268] [3269] [3270] [3271] [3272] [3273] [3274] [3275] [3276] [3277] [3278] [3279] [3280] [3281] [3282] [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] [3291] [3292] [3293] [3294] [3295] [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] Underfull \hbox (badness 1286) in paragraph at lines 13737--13744 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3310] [3311] [3312] [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330]pdfTeX war ning (ext4): destination with the same identifier (name{Rfn.random.effects}) ha s been already used, duplicate ignored \relax l.15180 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.random.effects.1}) has been already us ed, duplicate ignored \relax l.15180 ...Extract Random Effects}{random.effects} [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] Underfull \hbox (badness 3884) in paragraph at lines 15820--15824 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15820--15824 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15820--15824 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3341] [3342] Underfull \hbox (badness 1067) in paragraph at lines 15932--15937 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3343] [3344] [3345] [3346] Underfull \hbox (badness 1448) in paragraph at lines 16175--16184 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/it/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3347] [3348] [3349] [3350] [3351] [3352] [3353] [3354] [3355] [3356] Underfull \hbox (badness 1728) in paragraph at lines 16879--16882 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3357] [3358] [3359] [3360] [3361] Underfull \hbox (badness 8056) in paragraph at lines 17214--17223 \T1/zi4/m/it/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/it /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17214--17223 \T1/zi4/m/it/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17214--17223 \T1/zi4/m/it/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3362] [3363] [3364] [3365] [3366] Underfull \hbox (badness 10000) in paragraph at lines 17536--17544 [][][]\T1/zi4/m/it/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varPower[][][][]\T1/ptm/m/n/10 , [3367] [3368] [3369] [3370] [3371] [3372] [3373] [3374] [3375] [3376] Underfull \hbox (badness 10000) in paragraph at lines 18246--18256 [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18246--18256 [][][]\T1/zi4/m/it/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3377] [3378] [3379] [3380] [3381] Underfull \hbox (badness 5036) in paragraph at lines 18570--18579 [][][]\T1/zi4/m/it/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3382] [3383] [3384] [3385] [3386] [3387] [3388] [3389] [3390] [3391] [3392] [3393] [3394]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.multinom.1}) has been already used, du plicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3395] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [3396] [3397] [3398] [3399] [3400] [3401] [3402]) (./rpart-pkg.tex Chapter 27. [3403] [3404] [3405] [3406] [3407] [3408] [3409] [3410] [3411] [3412] [3413] [3414] [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] [3423] [3424] [3425] [3426] [3427] [3428] [3429] [3430] [3431]) (./spatial-pkg.tex [3432] Chapter 28. [3433] [3434] [3435] [3436] [3437] [3438] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3439] [3440] [3441] [3442] [3443] [3444] [3445] [3446] [3447] [3448] [3449] [3450] [3451]) (./survival-pkg.tex [3452] Chapter 29. [3453] [3454] [3455] [3456] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3457] [3458]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.aml.1}) has been already used, duplica te ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3459] [3460] [3461] [3462] Overfull \vbox (3.85637pt too high) has occurred while \output is active [3463] [3464] [3465] [3466] [3467] [3468] [3469] Underfull \hbox (badness 1097) in paragraph at lines 1108--1110 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3470] [3471] [3472]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) has been already used, duplicate ignored \relax l.1310 ...erapy for Stage B/C colon cancer}{colon} [3473] Underfull \hbox (badness 3679) in paragraph at lines 1358--1362 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/it/10 table(colon$nodes, [3474] [3475] [3476] [3477] [3478] [3479] [3480] Underfull \hbox (badness 3250) in paragraph at lines 1943--1958 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/it/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 1943--1958 []\T1/zi4/m/it/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3481] [3482] [3483] [3484] [3485] [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493] [3494] [3495] [3496] [3497] [3498] [3499] [3500] Underfull \hbox (badness 1389) in paragraph at lines 3305--3307 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3501] [3502] [3503] [3504] Overfull \hbox (467.89665pt too wide) in alignment at lines 3591--3591 [] [] [3505] [3506] [3507] [3508] [3509] [3510] [3511] [3512] [3513] [3514] [3515] [3516] Underfull \vbox (badness 1533) has occurred while \output is active [3517] [3518] [3519] [3520] [3521] [3522] [3523] [3524] [3525] [3526] [3527] [3528] [3529] [3530] Underfull \hbox (badness 5274) in paragraph at lines 5325--5327 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3531] [3532] [3533] [3534] [3535] [3536] [3537] [3538] [3539] [3540] [3541] [3542] Underfull \vbox (badness 3168) has occurred while \output is active [3543] [3544] [3545] [3546] [3547] [3548] Underfull \hbox (badness 1281) in paragraph at lines 6575--6578 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/it/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/it/10 "dfbeta"[]\T1/ptm/m/n/10 , [3549] [3550] [3551] [3552] [3553] [3554] [3555] [3556]pdfTeX warning (ext4): d estination with the same identifier (name{Rfn.solder}) has been already used, d uplicate ignored \relax l.7134 ...ata from a soldering experiment}{solder} [3557] Underfull \vbox (badness 1622) has occurred while \output is active [3558] [3559] [3560] [3561] [3562] [3563] [3564] [3565] [3566] [3567] [3568] [3569] [3570] [3571] [3572] [3573] [3574] [3575] [3576] [3577] Underfull \hbox (badness 1038) in paragraph at lines 8630--8636 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3578] [3579] [3580] [3581] [3582] Underfull \hbox (badness 10000) in paragraph at lines 8988--8993 [][][]\T1/zi4/m/it/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] [3591] [3592] [3593] [3594] Underfull \hbox (badness 1354) in paragraph at lines 9928--9932 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. 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at lines 6002--6004 []\T1/zi4/m/it/10 Arith,triangularMatrix,diagonalMatrix-method [3671] [3672] [3673] Overfull \hbox (15.01662pt too wide) in paragraph at lines 6666--6668 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3674] [3675] [3676] Overfull \hbox (0.8567pt too wide) in paragraph at lines 7334--7336 []\T1/zi4/m/it/10 cbind2,denseMatrix,sparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 7336--7338 []\T1/zi4/m/it/10 cbind2,diagonalMatrix,sparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 7366--7368 []\T1/zi4/m/it/10 cbind2,sparseMatrix,denseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 7368--7370 []\T1/zi4/m/it/10 cbind2,sparseMatrix,diagonalMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 7374--7376 []\T1/zi4/m/it/10 cbind2,sparseMatrix,sparseMatrix-method [3677] [3678] [3679] [3680] Overfull \hbox (10.8567pt too wide) in paragraph at lines 8135--8137 []\T1/zi4/m/it/10 coerce,atomicVector,dsparseVector-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8137--8139 []\T1/zi4/m/it/10 coerce,atomicVector,sparseVector-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8147--8149 []\T1/zi4/m/it/10 coerce,CHMfactor,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8151--8153 []\T1/zi4/m/it/10 coerce,CsparseMatrix,denseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8155--8157 []\T1/zi4/m/it/10 coerce,CsparseMatrix,lsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8157--8159 []\T1/zi4/m/it/10 coerce,CsparseMatrix,matrix.coo-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8159--8161 []\T1/zi4/m/it/10 coerce,CsparseMatrix,matrix.csc-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8161--8163 []\T1/zi4/m/it/10 coerce,CsparseMatrix,matrix.csr-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8165--8167 []\T1/zi4/m/it/10 coerce,CsparseMatrix,nsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8167--8169 []\T1/zi4/m/it/10 coerce,CsparseMatrix,RsparseMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8169--8171 []\T1/zi4/m/it/10 coerce,CsparseMatrix,sparseVector-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 8171--8173 []\T1/zi4/m/it/10 coerce,CsparseMatrix,symmetricMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8173--8175 []\T1/zi4/m/it/10 coerce,CsparseMatrix,TsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8193--8195 []\T1/zi4/m/it/10 coerce,ddiMatrix,symmetricMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8195--8197 []\T1/zi4/m/it/10 coerce,ddiMatrix,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8199--8201 []\T1/zi4/m/it/10 coerce,denseMatrix,CsparseMatrix-method 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at lines 8515--8517 []\T1/zi4/m/it/10 coerce,lgeMatrix,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8529--8531 []\T1/zi4/m/it/10 coerce,lgTMatrix,symmetricMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8531--8533 []\T1/zi4/m/it/10 coerce,lgTMatrix,triangularMatrix-method [3684] Overfull \hbox (15.8567pt too wide) in paragraph at lines 8557--8559 []\T1/zi4/m/it/10 coerce,lsparseMatrix,dsparseMatrix-method [3685] [3686] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8743--8745 []\T1/zi4/m/it/10 coerce,matrix.coo,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8751--8753 []\T1/zi4/m/it/10 coerce,matrix.coo,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8753--8755 []\T1/zi4/m/it/10 coerce,matrix.csc,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8759--8761 []\T1/zi4/m/it/10 coerce,matrix.csc,TsparseMatrix-method Overfull \hbox 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)\T1/ptm/m/n/10 , [3695] Overfull \hbox (15.01662pt too wide) in paragraph at lines 10092--10094 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.cr.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 10097--10099 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ps.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 10105--10107 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3696] Overfull \hbox (5.8567pt too wide) in paragraph at lines 10454--10456 []\T1/zi4/m/it/10 determinant,ddenseMatrix,logical-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10456--10458 []\T1/zi4/m/it/10 determinant,ddenseMatrix,missing-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 10464--10466 []\T1/zi4/m/it/10 determinant,diagonalMatrix,logical-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 10478--10480 []\T1/zi4/m/it/10 determinant,dsparseMatrix,logical-method [3697] Overfull \hbox (5.8567pt too wide) in paragraph at lines 10498--10500 []\T1/zi4/m/it/10 determinant,sparseMatrix,logical-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10500--10502 []\T1/zi4/m/it/10 determinant,sparseMatrix,missing-method [3698] [3699] [3700] Overfull \hbox (15.01662pt too wide) in paragraph at lines 11224--11226 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ds.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3701] [3702] Overfull \hbox (15.01662pt too wide) in paragraph at lines 11755--11757 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.fs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3703] [3704] Overfull \hbox (15.8567pt too wide) in paragraph at lines 12104--12106 []\T1/zi4/m/it/10 forceSymmetric,corMatrix,character-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 12106--12108 []\T1/zi4/m/it/10 forceSymmetric,corMatrix,missing-method Overfull \hbox (5.8567pt too 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wide) in paragraph at lines 13128--13130 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3709] [3710] [3711] [3712] [3713] [3714] [3715] [3716] Overfull \hbox (0.8567pt too wide) in paragraph at lines 14710--14712 []\T1/zi4/m/it/10 kronecker,diagonalMatrix,Matrix-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 14712--14714 []\T1/zi4/m/it/10 kronecker,dsparseMatrix,dsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 14722--14724 []\T1/zi4/m/it/10 kronecker,Matrix,diagonalMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 14726--14728 []\T1/zi4/m/it/10 kronecker,sparseMatrix,TsparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 14728--14730 []\T1/zi4/m/it/10 kronecker,TsparseMatrix,sparseMatrix-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 14730--14732 []\T1/zi4/m/it/10 kronecker,TsparseMatrix,TsparseMatrix-method [3717] [3718] 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This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./fullrefman.tex LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-05-07> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2020/04/10 v1.4m Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (../../share/texmf/tex/latex/Rd.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/zi4.sty `inconsolata-zi4' v1.12, 2019/05/17 Text macros for Inconsolata (msharpe) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex))))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref-langpatches.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on input line 388. 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[3] [4] Underfull \hbox (badness 6252) in paragraph at lines 143--151 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 143--151 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [5] [6] [7] Underfull \hbox (badness 1178) in paragraph at lines 328--331 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [8] [9] [10] Underfull \hbox (badness 2556) in paragraph at lines 567--573 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [11] [12] [13] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [14] [15] [16] [17] [18] [19] [20] [21] [22] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [23] [24] [25] Underfull \hbox (badness 10000) in paragraph at lines 1578--1584 [26] [27] [28] [29] [30] [31] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2056--2056 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] Underfull \hbox (badness 1721) in paragraph at lines 2720--2724 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] Underfull \vbox (badness 10000) has occurred while \output is active [52] [53] [54] [55] [56] [57] [58] Underfull \hbox (badness 10000) in paragraph at lines 3901--3903 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] Underfull \hbox (badness 2521) in paragraph at lines 5196--5198 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6387--6387 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] Underfull \hbox (badness 1303) in paragraph at lines 7281--7288 []\T1/zi4/m/n/10 file []\T1/ptm/m/n/10 can be used with []\T1/zi4/m/n/10 descri ption = "clipboard" []\T1/ptm/m/n/10 in mode []\T1/zi4/m/n/10 "r" []\T1/ptm/m/n /10 only. This reads the Underfull \hbox (badness 2111) in paragraph at lines 7292--7297 []\T1/ptm/m/n/10 Unix users wish-ing to \T1/ptm/m/it/10 write \T1/ptm/m/n/10 to one of the X11 se-lec-tions may be able to do so via [106] [107] Underfull \vbox (badness 10000) has occurred while \output is active [108] [109] [110] [111] [112] [113] [114] [115] Underfull \hbox (badness 2096) in paragraph at lines 7962--7966 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [116] Underfull \hbox (badness 2351) in paragraph at lines 8076--8079 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [117] [118] [119] [120] [121] Underfull \hbox (badness 4479) in paragraph at lines 8393--8404 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [122] [123] [124] [125] [126] [127] Underfull \hbox (badness 1629) in paragraph at lines 8845--8857 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 8845--8857 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] Underfull \hbox (badness 1178) in paragraph at lines 9596--9600 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] Underfull \hbox (badness 2744) in paragraph at lines 11903--11905 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] Underfull \hbox (badness 2253) in paragraph at lines 14099--14101 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [201] Underfull \hbox (badness 1565) in paragraph at lines 14175--14179 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [202] Underfull \hbox (badness 4927) in paragraph at lines 14219--14221 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [203] [204] Underfull \hbox (badness 3148) in paragraph at lines 14321--14326 [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.fi les[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 help[][][][]\T1/ptm/m/n/10 ; [ ][][]\T1/zi4/m/n/10 RShowDoc[][][] []\T1/ptm/m/n/10 call []\T1/zi4/m/n/10 file. show() []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 type = "text"[]\T1/ptm/m/n/10 . Co n-sider Underfull \hbox (badness 1466) in paragraph at lines 14368--14371 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [205] Underfull \vbox (badness 1418) has occurred while \output is active [206] Underfull \hbox (badness 10000) in paragraph at lines 14499--14503 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14510--14513 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [207] [208] [209] [210] Underfull \hbox (badness 3965) in paragraph at lines 14807--14811 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] Underfull \hbox (badness 4429) in paragraph at lines 15588--15591 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [223] Underfull \hbox (badness 10000) in paragraph at lines 15694--15696 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [224] Underfull \hbox (badness 2035) in paragraph at lines 15767--15771 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [225] [226] [227] [228] [229] [230] [231] [232] [233] Underfull \hbox (badness 2452) in paragraph at lines 16379--16383 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16379--16383 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [234] [235] [236] Underfull \hbox (badness 1092) in paragraph at lines 16552--16557 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [237] [238] [239] Underfull \hbox (badness 6741) in paragraph at lines 16805--16809 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [240] [241] [242] Underfull \vbox (badness 10000) has occurred while \output is active [243] [244] [245] [246] [247] [248] [249] Underfull \vbox (badness 10000) has occurred while \output is active [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] Underfull \hbox (badness 1478) in paragraph at lines 18257--18260 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [260] [261] [262] [263] Underfull \hbox (badness 10000) in paragraph at lines 18529--18531 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 18535--18544 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [264] [265] [266] [267] [268] [269] [270] [271] Underfull \hbox (badness 1442) in paragraph at lines 19143--19145 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [272] [273] [274] [275] [276] Underfull \hbox (badness 10000) in paragraph at lines 19474--19480 [277] [278] [279] Underfull \hbox (badness 1248) in paragraph at lines 19719--19722 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [280] [281] [282] [283] [284] Underfull \hbox (badness 4739) in paragraph at lines 19982--19984 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [285] [286] [287] Underfull \hbox (badness 1603) in paragraph at lines 20209--20212 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [288] [289] [290] [291] [292] [293] [294] [295] [296] [297] [298] [299] [300] Underfull \hbox (badness 2469) in paragraph at lines 21066--21071 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [301] Underfull \hbox (badness 1675) in paragraph at lines 21154--21163 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21164--21179 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [302] Underfull \hbox (badness 10000) in paragraph at lines 21214--21217 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21214--21217 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [303] [304] Underfull \hbox (badness 1014) in paragraph at lines 21348--21353 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [305] [306] [307] [308] [309] [310] [311] [312] [313] [314] [315] [316] Underfull \hbox (badness 1264) in paragraph at lines 22197--22205 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [317] Underfull \hbox (badness 4441) in paragraph at lines 22231--22234 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [318] [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] Underfull \hbox (badness 5231) in paragraph at lines 23028--23030 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] [341] [342] [343] [344] Underfull \hbox (badness 10000) in paragraph at lines 24121--24127 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24121--24127 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [345] [346] [347] [348] [349] [350] [351] Underfull \hbox (badness 2790) in paragraph at lines 24618--24621 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 24618--24621 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [352] [353] [354] [355] [356] Underfull \hbox (badness 1194) in paragraph at lines 24941--24944 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [357] [358] [359] Underfull \hbox (badness 2368) in paragraph at lines 25148--25154 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [360] [361] [362] [363] [364] Underfull \hbox (badness 10000) in paragraph at lines 25538--25541 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [365] [366] [367] [368] [369] [370] [371] [372] [373] Underfull \hbox (badness 10000) in paragraph at lines 26159--26161 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] Underfull \hbox (badness 1881) in paragraph at lines 27054--27057 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27078--27080 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [387] [388] Underfull \hbox (badness 2142) in paragraph at lines 27219--27223 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27276--27281 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [389] [390] [391] Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 27570--27576 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by [392] Underfull \hbox (badness 10000) in paragraph at lines 27583--27586 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 27609--27611 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 27651--27656 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 27657--27668 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 27657--27668 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 27669--27672 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [393] [394] [395] [396] [397] Underfull \vbox (badness 10000) has occurred while \output is active [398] Underfull \hbox (badness 10000) in paragraph at lines 28069--28073 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [399] [400] Underfull \hbox (badness 10000) in paragraph at lines 28216--28219 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [401] Underfull \hbox (badness 7925) in paragraph at lines 28297--28301 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28297--28301 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28302--28311 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [402] [403] [404] [405] [406] [407] [408] [409] [410] [411] [412] [413] [414] [415] Underfull \hbox (badness 2726) in paragraph at lines 29298--29301 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [416] [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] Underfull \hbox (badness 1603) in paragraph at lines 30048--30051 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [428] [429] [430] [431] [432] [433] Underfull \vbox (badness 10000) has occurred while \output is active [434] [435] [436] [437] [438] [439] [440] [441] Underfull \hbox (badness 1533) in paragraph at lines 31085--31088 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [442] [443] Underfull \hbox (badness 1163) in paragraph at lines 31248--31259 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [444] [445] [446] [447] [448] [449] [450] [451] [452] [453] [454] Underfull \vbox (badness 10000) has occurred while \output is active [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] Underfull \hbox (badness 10000) in paragraph at lines 32911--32915 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 32911--32915 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. [468] Underfull \hbox (badness 3557) in paragraph at lines 32932--32934 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 32935--32939 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [469] [470] [471] [472] [473] [474] [475] [476] Underfull \hbox (badness 1655) in paragraph at lines 33529--33531 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [477] [478] [479] [480] [481] [482] [483] [484] [485] [486] [487] [488] [489] [490] [491] [492] [493] [494] Underfull \hbox (badness 2261) in paragraph at lines 34735--34740 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] Underfull \hbox (badness 10000) in paragraph at lines 35855--35866 \T1/zi4/m/n/10 / / docs . microsoft . com / en-[]us / cpp / c-[]language / pars ing-[]c-[]command-[]line-[]arguments ? [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] Underfull \hbox (badness 10000) in paragraph at lines 37386--37388 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [532] [533] [534] [535] [536] [537] Underfull \hbox (badness 2913) in paragraph at lines 37806--37810 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [538] [539] [540] Underfull \hbox (badness 1072) in paragraph at lines 38052--38056 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38057--38061 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [541] Underfull \hbox (badness 10000) in paragraph at lines 38097--38103 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38097--38103 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38097--38103 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38112--38119 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38112--38119 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [542] [543] [544] Underfull \hbox (badness 2644) in paragraph at lines 38347--38351 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [545] [546] Underfull \hbox (badness 1142) in paragraph at lines 38500--38506 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [547] [548] [549] [550] [551] [552] [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] Underfull \hbox (badness 1158) in paragraph at lines 39801--39803 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [566] [567] [568] [569] [570] [571] [572] [573] [574] Underfull \hbox (badness 1137) in paragraph at lines 40391--40397 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails [575] Underfull \hbox (badness 4967) in paragraph at lines 40410--40415 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [576] Underfull \hbox (badness 1616) in paragraph at lines 40530--40535 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [577] [578] [579] [580] [581] [582] [583] [584] [585] Underfull \hbox (badness 1472) in paragraph at lines 41077--41080 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [586] [587] [588] [589] [590] [591] [592] [593] [594] [595] [596] [597] [598] Underfull \hbox (badness 10000) in paragraph at lines 42003--42007 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [599] [600] [601] [602] Underfull \hbox (badness 10000) in paragraph at lines 42254--42257 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [603] [604] [605] Underfull \hbox (badness 10000) in paragraph at lines 42438--42442 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [606] [607] [608] [609] [610] [611] [612] [613] Underfull \hbox (badness 10000) in paragraph at lines 43064--43067 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [614] [615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626] Underfull \hbox (badness 1990) in paragraph at lines 43986--43994 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 43986--43994 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [627] [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638] [639] [640] Underfull \hbox (badness 2452) in paragraph at lines 44955--44961 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [641] [642] [643] [644] [645] [646] Underfull \hbox (badness 3668) in paragraph at lines 45353--45355 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [647] Underfull \hbox (badness 2401) in paragraph at lines 45483--45487 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [648] [649] [650] [651] Underfull \hbox (badness 2111) in paragraph at lines 45691--45696 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [652] [653] [654] Underfull \hbox (badness 4001) in paragraph at lines 45937--45939 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [655] [656] [657] [658] [659] Underfull \hbox (badness 5417) in paragraph at lines 46302--46306 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [660] Underfull \hbox (badness 10000) in paragraph at lines 46363--46367 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [661]) (./compiler-pkg.tex [662] Chapter 2. [663] [664] [665] [666]) (./datasets-pkg.tex Chapter 3. [667] [668] [669] [670] [671] [672] Underfull \vbox (badness 1472) has occurred while \output is active [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Overfull \vbox (4.26088pt too high) has occurred while \output is active [704] [705] [706] [707] [708] [709] Overfull \vbox (13.87083pt too high) has occurred while \output is active [710] Underfull \vbox (badness 2376) has occurred while \output is active [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] Overfull \vbox (10.49593pt too high) has occurred while \output is active [727] Overfull \vbox (15.49593pt too high) has occurred while \output is active [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742]) (./grDevices-pkg.tex Chapter 4. [743] [744] [745] [746] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [747] [748] [749] [750] [751] [752] [753] [754] [755] Underfull \hbox (badness 1424) in paragraph at lines 898--900 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [756] [757] [758] [759] [760] Underfull \hbox (badness 5175) in paragraph at lines 1192--1194 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [761] [762] Underfull \hbox (badness 2512) in paragraph at lines 1311--1313 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [763] [764] [765] [766] Underfull \hbox (badness 1490) in paragraph at lines 1611--1616 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1624--1628 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [767] [768] [769] [770] [771] [772] Underfull \hbox (badness 1325) in paragraph at lines 2038--2048 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [773] [774] Underfull \hbox (badness 10000) in paragraph at lines 2150--2152 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [775] [776] Underfull \hbox (badness 6758) in paragraph at lines 2329--2332 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [777] [778] [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] [782] [783] [784] [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2940--2941 Underfull \vbox (badness 10000) has occurred while \output is active [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] Underfull \vbox (badness 10000) has occurred while \output is active [802] Underfull \hbox (badness 10000) in paragraph at lines 4016--4019 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] Underfull \vbox (badness 10000) has occurred while \output is active [814] [815] Underfull \hbox (badness 1584) in paragraph at lines 4907--4909 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 4911--4918 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [816] [817] [818] [819] Underfull \hbox (badness 1377) in paragraph at lines 5217--5222 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [820] Underfull \hbox (badness 1418) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5311--5313 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [821] Underfull \hbox (badness 1377) in paragraph at lines 5422--5427 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [822] Underfull \hbox (badness 7344) in paragraph at lines 5491--5493 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [823] [824] Underfull \hbox (badness 2035) in paragraph at lines 5629--5638 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5629--5638 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5629--5638 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [825] Underfull \hbox (badness 10000) in paragraph at lines 5697--5699 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / Underfull \vbox (badness 10000) has occurred while \output is active [826] [827] [828] Underfull \hbox (badness 1546) in paragraph at lines 5841--5849 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] [836] Underfull \hbox (badness 10000) in paragraph at lines 6379--6382 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [837] [838] [839] [840] [841] [842] [843] [844] [845] [846] [847] [848] Underfull \hbox (badness 1189) in paragraph at lines 7208--7210 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [849] Underfull \hbox (badness 10000) in paragraph at lines 7313--7315 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [850] [851] [852] [853] [854] Underfull \hbox (badness 3780) in paragraph at lines 7627--7633 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [855] [856] [857] [858] [859]) (./graphics-pkg.tex [860] Chapter 5. [861] [862] [863] [864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875] Overfull \hbox (12.71341pt too wide) in paragraph at lines 983--983 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [876] [877] [878] [879] [880] [881] Underfull \hbox (badness 4634) in paragraph at lines 1357--1360 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [882] [883] [884] [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] Underfull \hbox (badness 1728) in paragraph at lines 2335--2337 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [897] Underfull \hbox (badness 1009) in paragraph at lines 2428--2435 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] Underfull \vbox (badness 10000) has occurred while \output is active [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] Underfull \hbox (badness 3229) in paragraph at lines 4652--4657 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [932] [933] [934] [935] [936] Underfull \hbox (badness 1107) in paragraph at lines 5081--5087 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [937] Underfull \hbox (badness 10000) in paragraph at lines 5210--5213 [938] Underfull \hbox (badness 10000) in paragraph at lines 5271--5273 [939 ] [940 ] [941] [942] [943] [944] [945] [946] [947] [948]pdfTeX warning (ext4): destinati on with the same identifier (name{Rfn.plot}) has been already used, duplicate i gnored \relax l.5943 \aliasA{plot}{plot.default}{plot} [949] [950] [951] [952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6848--6849 [][] [963 ] [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] Underfull \hbox (badness 4954) in paragraph at lines 8936--8938 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 8938--8940 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [995]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.unit s}) has been already used, duplicate ignored \relax l.9018 \HeaderA{units}{Graphical Units}{units} [996] [997] [998] [999]) (./grid-pkg.tex [1000] Chapter 6. [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1019] Underfull \vbox (badness 10000) has occurred while \output is active [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) in paragraph at lines 3041--3043 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] Underfull \vbox (badness 10000) has occurred while \output is active [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] Underfull \hbox (badness 1067) in paragraph at lines 4761--4764 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1075] [1076] [1077] [1078] [1079] [1080] Underfull \hbox (badness 7256) in paragraph at lines 5112--5114 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \hbox (badness 2142) in paragraph at lines 5561--5565 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1088] Underfull \hbox (badness 4699) in paragraph at lines 5632--5637 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118]) (./methods-pkg.tex Chapter 7. [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] Underfull \vbox (badness 10000) has occurred while \output is active [1127] Underfull \vbox (badness 10000) has occurred while \output is active [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1145] [1146] [1147] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1153] [1154] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1155] [1156] [1157] [1158] [1159] [1160] [1161] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1162] [1163] [1164] [1165] [1166] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1169] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1178] [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] Underfull \vbox (badness 10000) has occurred while \output is active [1187] Underfull \vbox (badness 10000) has occurred while \output is active [1188] [1189] [1190] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1191] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1192] [1193] [1194] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1203] [1204] [1205] [1206] Underfull \vbox (badness 10000) has occurred while \output is active [1207] [1208] [1209]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1210] [1211] [1212]pdfTeX warning (ext4): desti nation with the same identifier (name{Rfn.Complex}) has been already used, dupl icate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destinat ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) has been already used, duplicate igno red \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination wi th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor ed \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1213] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1214] [1215] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1256] [1257] [1258]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1259] [1260] [1261] [1262] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] Underfull \hbox (badness 3386) in paragraph at lines 1402--1405 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1279] [1280] [1281]) (./splines-pkg.tex [1282] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] [1295] [1296]) (./stats-pkg.tex Chapter 10. [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] Underfull \hbox (badness 1412) in paragraph at lines 887--889 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1310] [1311] [1312] [1313] [1314] [1315] [1316] Underfull \hbox (badness 2503) in paragraph at lines 1369--1372 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] Underfull \hbox (badness 2503) in paragraph at lines 3530--3533 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] Underfull \hbox (badness 3989) in paragraph at lines 4787--4794 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2556) in paragraph at lines 5424--5427 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1377] [1378] [1379] [1380] [1381] [1382] Underfull \hbox (badness 2503) in paragraph at lines 5838--5842 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] Underfull \hbox (badness 7081) in paragraph at lines 6632--6635 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6636--6638 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1395] Underfull \vbox (badness 10000) has occurred while \output is active [1396] [1397] [1398] [1399] Underfull \vbox (badness 10000) has occurred while \output is active [1400] [1401] [1402] [1403] [1404] [1405] [1406] Underfull \hbox (badness 10000) in paragraph at lines 7493--7496 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428] [1429] [1430] [1431] Underfull \hbox (badness 2626) in paragraph at lines 9172--9175 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1432] [1433] Underfull \hbox (badness 2503) in paragraph at lines 9279--9283 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1434] [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] Underfull \hbox (badness 4518) in paragraph at lines 10631--10636 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1453] [1454] [1455] [1456] [1457] Underfull \hbox (badness 2142) in paragraph at lines 10992--10995 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11011--11014 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1458] Underfull \hbox (badness 1708) in paragraph at lines 11073--11077 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1459] [1460] [1461] [1462] [1463] Underfull \hbox (badness 1694) in paragraph at lines 11469--11472 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471]pdfTeX warning (ext4): d estination with the same identifier (name{Rfn.hat}) has been already used, dupl icate ignored \relax l.11950 \aliasA{hat}{influence.measures}{hat} [1472] [1473] Underfull \hbox (badness 1484) in paragraph at lines 12092--12094 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] Underfull \hbox (badness 10000) in paragraph at lines 12694--12696 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1483] [1484] [1485] [1486] [1487] Underfull \hbox (badness 2894) in paragraph at lines 13030--13034 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1488] [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 1496) in paragraph at lines 13444--13450 []\T1/ptm/m/n/10 Gunar Schröer and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1494] [1495] [1496] [1497] [1498] [1499] Underfull \hbox (badness 4518) in paragraph at lines 13842--13847 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] Underfull \hbox (badness 4518) in paragraph at lines 14503--14508 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1510] [1511] Underfull \hbox (badness 6412) in paragraph at lines 14641--14645 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14648--14650 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1512] [1513] [1514] [1515] [1516] [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] Underfull \hbox (badness 2503) in paragraph at lines 15724--15728 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1528] [1529] [1530] [1531] [1532] [1533] [1534] [1535] Underfull \hbox (badness 10000) in paragraph at lines 16237--16243 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16237--16243 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] Underfull \hbox (badness 1158) in paragraph at lines 17888--17891 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1560] [1561] Underfull \vbox (badness 10000) has occurred while \output is active [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] Underfull \hbox (badness 1377) in paragraph at lines 18915--18920 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on [1575] Underfull \hbox (badness 1735) in paragraph at lines 18920--18923 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18933--18937 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18933--18937 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 18941--18945 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1576] [1577] [1578] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19166--19166 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19169--19169 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1579] [1580] [1581] [1582] [1583] [1584] [1585] Underfull \hbox (badness 1337) in paragraph at lines 19628--19631 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1586] [1587] [1588] [1589] [1590] [1591] [1592] [1593] Underfull \hbox (badness 10000) in paragraph at lines 20099--20105 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1594] [1595] [1596] [1597] [1598] Underfull \hbox (badness 1194) in paragraph at lines 20429--20432 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1599] [1600] [1601] [1602] [1603] [1604] Underfull \hbox (badness 2503) in paragraph at lines 20808--20811 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1605] Underfull \hbox (badness 3919) in paragraph at lines 20835--20837 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1606] [1607] [1608] [1609] [1610] [1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621] Underfull \hbox (badness 10000) in paragraph at lines 21913--21919 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1622] [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 1337) in paragraph at lines 23270--23276 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1643] [1644] [1645] [1646] [1647] [1648] [1649] Underfull \hbox (badness 1436) in paragraph at lines 23695--23698 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1650] [1651] Underfull \hbox (badness 10000) in paragraph at lines 23836--23837 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1652] [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] Underfull \hbox (badness 1824) in paragraph at lines 24808--24814 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24808--24814 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 24829--24832 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] Underfull \hbox (badness 2165) in paragraph at lines 25410--25415 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1675] [1676] [1677] [1678] Underfull \hbox (badness 1867) in paragraph at lines 25619--25621 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25634--25638 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] Underfull \vbox (badness 10000) has occurred while \output is active [1702] Underfull \hbox (badness 3514) in paragraph at lines 27282--27287 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1703] [1704] [1705] [1706] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27516--27516 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1707] Underfull \hbox (badness 3514) in paragraph at lines 27552--27558 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1708] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27609--27609 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27611--27611 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1709] [1710] Underfull \hbox (badness 3514) in paragraph at lines 27785--27790 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1711] [1712] Underfull \hbox (badness 3514) in paragraph at lines 27872--27877 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1713] Underfull \hbox (badness 3514) in paragraph at lines 27937--27942 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1714] Underfull \hbox (badness 3514) in paragraph at lines 28031--28036 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1715] [1716] Underfull \hbox (badness 6691) in paragraph at lines 28123--28128 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] Underfull \hbox (badness 4024) in paragraph at lines 28614--28617 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1725] [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] Underfull \hbox (badness 5431) in paragraph at lines 29220--29222 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1734] [1735] [1736] [1737] Underfull \hbox (badness 5431) in paragraph at lines 29430--29433 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1738] [1739] [1740] [1741] [1742] Underfull \hbox (badness 1337) in paragraph at lines 29745--29749 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1743] [1744] [1745] [1746] Underfull \hbox (badness 1616) in paragraph at lines 30057--30060 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1747] [1748] [1749] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 3557) in paragraph at lines 31192--31196 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1765] [1766] Underfull \vbox (badness 10000) has occurred while \output is active [1767] [1768] [1769] Underfull \hbox (badness 1337) in paragraph at lines 31556--31560 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1770] [1771] [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 1337) in paragraph at lines 32085--32089 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1778] [1779] [1780] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32292--32292 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1781] [1782] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32453--32453 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1783] [1784] [1785] [1786] [1787]) (./stats4-pkg.tex [1788] Chapter 11. [1789] [1790] [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] [1793] [1794] [1795] [1796]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.show.Rdash.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1797] [1798] [1799]) (./tcltk-pkg.tex [1800] Chapter 12. [1801] [1802] [1803] [1804] [1805] [1806] [1807] Underfull \vbox (badness 10000) has occurred while \output is active [1808] Underfull \hbox (badness 1546) in paragraph at lines 666--673 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820]) (./tools-pkg.tex Chapter 13. [1821] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1822] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1823] [1824] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1825] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1826] [1827] Underfull \hbox (badness 1142) in paragraph at lines 463--467 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1828] [1829] [1830] [1831] [1832] Overfull \vbox (7.18602pt too high) has occurred while \output is active [1833] [1834] [1835] [1836] [1837] [1838] Underfull \hbox (badness 1014) in paragraph at lines 1174--1176 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1180--1182 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous Underfull \hbox (badness 10000) in paragraph at lines 1217--1220 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1217--1220 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1839] [1840] [1841] [1842] [1843] Underfull \hbox (badness 2293) in paragraph at lines 1569--1571 []\T1/zi4/m/n/10 CRAN_memtest_notes() []\T1/ptm/m/n/10 is now dep-re-cated, wit h its func-tion-al-ity in-te-grated into that of [1844] Underfull \hbox (badness 10000) in paragraph at lines 1595--1598 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1845] [1846] Underfull \hbox (badness 4096) in paragraph at lines 1714--1722 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1724--1726 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1847] [1848] [1849]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1926 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ig nored \relax l.1927 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1850] [1851] [1852] [1853] Overfull \hbox (17.27782pt too wide) in paragraph at lines 2229--2229 []\T1/zi4/m/n/9 writeLines(paste0("\\newcommand{\\logo}{\\if{html}{\\figure{Rl ogo.svg}{options: width=100}",[] [1854] [1855] [1856] Underfull \hbox (badness 4096) in paragraph at lines 2398--2406 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1857] [1858] [1859] [1860] [1861] [1862] [1863] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2892. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. [1864] [1865] [1866] [1867] Underfull \hbox (badness 1424) in paragraph at lines 3195--3197 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] Underfull \hbox (badness 10000) in paragraph at lines 3897--3899 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 4036--4039 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1881] Underfull \hbox (badness 1137) in paragraph at lines 4138--4140 []\T1/ptm/m/n/10 a ma-trix spec-i-fy-ing all pack-ages in-stalled on the lo-cal sys-tem, as from [1882] [1883] [1884] [1885] [1886] Underfull \hbox (badness 1796) in paragraph at lines 4446--4451 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1887] Underfull \hbox (badness 4699) in paragraph at lines 4496--4500 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4496--4500 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from Underfull \hbox (badness 1838) in paragraph at lines 4524--4530 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4524--4530 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1888] [1889] [1890] [1891] Underfull \hbox (badness 2197) in paragraph at lines 4799--4809 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1892] Underfull \hbox (badness 1571) in paragraph at lines 4865--4869 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1893] [1894] [1895]) (./utils-pkg.tex [1896] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] Underfull \hbox (badness 10000) in paragraph at lines 726--732 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 726--732 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1907] [1908] [1909] Underfull \hbox (badness 3861) in paragraph at lines 931--936 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1910] [1911] [1912] Underfull \hbox (badness 3323) in paragraph at lines 1115--1123 []\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use []\T1/zi4/m/it /10 bibtex = T|F []\T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m $\T1/ptm/m/n/10 , in-di-cat- Underfull \hbox (badness 2961) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f or-mat- Underfull \hbox (badness 3919) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is Underfull \hbox (badness 2875) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 taken as [][][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex. max", 1) []\T1/ptm/m/n/10 which is []\T1/zi4/m/it/10 1 []\T1/ptm/m/n/10 typ-i-c ally. Underfull \hbox (badness 1817) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f ault by Underfull \hbox (badness 10000) in paragraph at lines 1127--1129 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 1371) in paragraph at lines 1637--1639 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1920] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1707. [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 2057) in paragraph at lines 2358--2360 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1930] [1931] [1932] [1933] [1934]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.clipboard}) has been already used, duplicate ignored \relax l.2710 ... the Clipboard in MS Windows}{clipboard} [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] Underfull \hbox (badness 6842) in paragraph at lines 4007--4012 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1954] Underfull \hbox (badness 1430) in paragraph at lines 4070--4078 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1955] [1956] Underfull \hbox (badness 10000) in paragraph at lines 4275--4277 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1957] [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.for mat}) has been already used, duplicate ignored \relax l.5044 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.format.1}) has been already used, dupl icate ignored \relax l.5044 ...mat Unordered and Ordered Lists}{format} [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 1622) in paragraph at lines 5567--5571 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [1977] [1978] [1979] [1980] [1981] [1982] Underfull \hbox (badness 1448) in paragraph at lines 5946--5951 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [1983] [1984] [1985] [1986] [1987] [1988] [1989] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6492. [1990] Underfull \hbox (badness 1371) in paragraph at lines 6496--6498 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1991] Underfull \hbox (badness 1502) in paragraph at lines 6585--6590 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6585--6590 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [1992] [1993] Underfull \hbox (badness 10000) in paragraph at lines 6758--6767 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [1994] Underfull \hbox (badness 2150) in paragraph at lines 6822--6825 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [1995] [1996] Underfull \hbox (badness 3118) in paragraph at lines 6961--6963 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [1997] [1998] Underfull \hbox (badness 1325) in paragraph at lines 7140--7144 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [1999] Underfull \hbox (badness 1424) in paragraph at lines 7232--7235 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2000] Underfull \hbox (badness 3219) in paragraph at lines 7303--7310 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7303--7310 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7303--7310 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7303--7310 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7311--7314 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2001] [2002] Underfull \hbox (badness 1024) in paragraph at lines 7438--7441 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7471--7476 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] [2013] Underfull \hbox (badness 10000) in paragraph at lines 8175--8177 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2014] [2015] [2016] [2017] [2018] [2019] [2020] [2021] [2022] [2023] [2024] [2025] Underfull \hbox (badness 2310) in paragraph at lines 8935--8940 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2026] [2027] [2028] [2029] [2030] [2031] [2032] Underfull \hbox (badness 1248) in paragraph at lines 9461--9465 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2033] Underfull \hbox (badness 1789) in paragraph at lines 9541--9543 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2034] [2035] [2036] [2037] [2038] [2039] [2040] [2041] [2042] Underfull \vbox (badness 5533) has occurred while \output is active [2043] [2044] [2045] Underfull \hbox (badness 1097) in paragraph at lines 10378--10381 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2046] [2047] Underfull \hbox (badness 3000) in paragraph at lines 10514--10519 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 2134) in paragraph at lines 11103--11108 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2056] Underfull \hbox (badness 10000) in paragraph at lines 11159--11164 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11159--11164 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \hbox (badness 2469) in paragraph at lines 11653--11657 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11653--11657 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 4060) in paragraph at lines 12077--12080 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2070] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12100--12100 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2071] [2072] [2073] Underfull \hbox (badness 2150) in paragraph at lines 12355--12357 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2074] [2075] [2076] [2077] Underfull \hbox (badness 10000) in paragraph at lines 12575--12579 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12608--12614 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12623--12631 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). 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If [2080] Underfull \hbox (badness 4779) in paragraph at lines 12842--12844 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 12872--12879 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2081] [2082] [2083] [2084] [2085] [2086] Underfull \hbox (badness 3780) in paragraph at lines 13280--13284 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13296--13299 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2087] [2088] [2089] Underfull \hbox (badness 2302) in paragraph at lines 13501--13503 []\T1/ptm/m/n/10 Convert file paths to the short form. 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Ob- [2102] [2103] Underfull \hbox (badness 1460) in paragraph at lines 14407--14415 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2104] [2105] Underfull \hbox (badness 6510) in paragraph at lines 14557--14561 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14564--14567 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14564--14567 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2106] [2107] [2108] [2109] [2110] [2111] [2112] [2113] [2114] Underfull \hbox (badness 10000) in paragraph at lines 15233--15238 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15233--15238 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15239--15241 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2115] Underfull \hbox (badness 10000) in paragraph at lines 15298--15301 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129] [2130]) [2131] [2132] (./KernSmooth-pkg.tex Chapter 15. [2133] [2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]) (./MASS-pkg.tex Chapter 16. [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] Underfull \hbox (badness 10000) in paragraph at lines 2879--2884 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2183] [2184] Underfull \hbox (badness 4686) in paragraph at lines 3047--3049 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] [2209] Underfull \hbox (badness 1117) in paragraph at lines 4808--4811 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2210] Underfull \hbox (badness 1117) in paragraph at lines 4886--4889 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6152 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.npk.1}) has been already used, duplica te ignored \relax l.6152 ...sical N, P, K Factorial Experiment}{npk} [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 1117) in paragraph at lines 7123--7130 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2241] Underfull \hbox (badness 3138) in paragraph at lines 7194--7200 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2242] [2243] [2244] Underfull \hbox (badness 1910) in paragraph at lines 7373--7376 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] Underfull \hbox (badness 4686) in paragraph at lines 8006--8008 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 41--44 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 41--44 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2291] Underfull \hbox (badness 1769) in paragraph at lines 95--98 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2292] [2293] [2294] [2295] Underfull \hbox (badness 5119) in paragraph at lines 514--518 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2296] [2297] Underfull \hbox (badness 2035) in paragraph at lines 610--613 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2298] [2299] Underfull \hbox (badness 1701) in paragraph at lines 763--767 []\T1/ptm/m/n/10 The orig-i-nal LA-PACK source code, in-clud-ing doc-u-men-ta-t ion; [][]$\T1/zi4/m/it/10 https : / / www . netlib . org / [2300] [2301] Underfull \hbox (badness 1521) in paragraph at lines 882--887 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 882--887 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 882--887 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2302] [2303] Underfull \hbox (badness 10000) in paragraph at lines 1061--1063 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2304] [2305]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.chol}) has been already used, duplicate ignored \relax l.1173 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.chol.1}) has been already used, duplic ate ignored \relax l.1173 ...- 'Matrix' S4 Generic and Methods}{chol} [2306] [2307] [2308] Underfull \hbox (badness 2277) in paragraph at lines 1428--1431 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2309] [2310] Underfull \hbox (badness 1097) in paragraph at lines 1600--1603 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1606--1610 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend [2311]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.col Sums}) has been already used, duplicate ignored \relax l.1663 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colSums.1}) has been already used, dup licate ignored \relax l.1663 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colMeans}) has been already used, dupl icate ignored \relax l.1664 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowMeans}) has been already used, duplicate i gnored \relax l.1685 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowSums}) has been already used, duplicate ig nored \relax l.1696 \aliasA{rowSums}{colSums}{rowSums} [2312] [2313] [2314] Underfull \hbox (badness 3547) in paragraph at lines 1915--1918 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2315] [2316] [2317] [2318] [2319] [2320] [2321] [2322] [2323] Underfull \hbox (badness 2717) in paragraph at lines 2654--2658 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2324] [2325] Underfull \hbox (badness 6842) in paragraph at lines 2744--2747 []\T1/zi4/m/it/10 Diagonal() []\T1/ptm/m/n/10 re-turns an ob-ject of class [][] []\T1/zi4/m/it/10 ddiMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 ldi Matrix[][][] []\T1/ptm/m/n/10 (with ``su-per-class'' [2326] Underfull \hbox (badness 8019) in paragraph at lines 3028--3030 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 3031--3035 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2327] [2328] [2329] Underfull \hbox (badness 1902) in paragraph at lines 3288--3290 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2330] Underfull \hbox (badness 2020) in paragraph at lines 3322--3325 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2331] [2332] [2333] Underfull \hbox (badness 1354) in paragraph at lines 3593--3596 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2334] [2335] [2336] [2337] [2338] Underfull \hbox (badness 4518) in paragraph at lines 4000--4003 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 4003--4006 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2339] [2340] Underfull \hbox (badness 2318) in paragraph at lines 4127--4131 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2341] Underfull \hbox (badness 3240) in paragraph at lines 4260--4264 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2342] [2343] [2344] [2345] [2346] [2347] [2348] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4693--4693 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4700--4700 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2349] [2350] [2351] Underfull \hbox (badness 1931) in paragraph at lines 4932--4934 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2352] [2353] [2354] [2355] Underfull \hbox (badness 1005) in paragraph at lines 5238--5243 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5238--5243 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 5257--5260 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2356] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5305--5305 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2357] Underfull \hbox (badness 3229) in paragraph at lines 5406--5415 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the [2358] Underfull \hbox (badness 10000) in paragraph at lines 5448--5450 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5453--5456 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low Underfull \hbox (badness 10000) in paragraph at lines 5463--5466 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2359] [2360] [2361] [2362] [2363] Underfull \hbox (badness 1014) in paragraph at lines 5842--5845 []\T1/zi4/m/it/10 isTriangular(M) []\T1/ptm/m/n/10 re-turns a [][][]\T1/zi4/m/i t/10 logical[][][] []\T1/ptm/m/n/10 in-di-cat-ing if []\T1/zi4/m/it/10 M []\T1/ ptm/m/n/10 is a tri-an-gu-lar ma-trix. Anal-o-gously, [2364] [2365] [2366] [2367] [2368] Underfull \hbox (badness 2478) in paragraph at lines 6269--6274 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class [2369] Underfull \hbox (badness 10000) in paragraph at lines 6277--6280 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2370] [2371] Underfull \hbox (badness 10000) in paragraph at lines 6564--6567 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2372] Underfull \hbox (badness 10000) in paragraph at lines 6636--6639 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2373] Underfull \hbox (badness 2050) in paragraph at lines 6712--6715 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2374] [2375] [2376] [2377] [2378] [2379]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7124 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7217--7219 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode [2380] Underfull \hbox (badness 4846) in paragraph at lines 7222--7225 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7227--7230 [2381]pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rp cent.*.Rpcent.}) has been already used, duplicate ignored \relax l.7300 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.crossprod}) has been already used, dup licate ignored \relax l.7410 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.tcrossprod}) has been already used, du plicate ignored \relax l.7513 ...tcrossprod}{matrix-products}{tcrossprod} [2382] Underfull \hbox (badness 10000) in paragraph at lines 7690--7695 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7690--7695 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7699--7701 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7701--7703 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2383] [2384] Underfull \hbox (badness 1430) in paragraph at lines 7849--7854 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2385] [2386] Underfull \hbox (badness 10000) in paragraph at lines 7975--7977 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2387] [2388] Underfull \vbox (badness 10000) has occurred while \output is active [2389] Underfull \hbox (badness 2478) in paragraph at lines 8183--8188 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8191--8194 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2390] [2391] Underfull \hbox (badness 5924) in paragraph at lines 8385--8387 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2392]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.nor m}) has been already used, duplicate ignored \relax l.8425 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignor ed \relax l.8425 \HeaderA{norm}{Matrix Norms}{norm} [2393] [2394] [2395] Underfull \hbox (badness 10000) in paragraph at lines 8787--8790 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2396] Underfull \hbox (badness 10000) in paragraph at lines 8862--8865 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2397] Underfull \hbox (badness 1014) in paragraph at lines 8947--8953 []\T1/ptm/m/n/10 It is used to de-fine com-mon meth-ods for ef-fi-cient sub-set -ting, trans-pos-ing etc for the \T1/ptm/m/it/10 ac- [2398] [2399] Underfull \hbox (badness 10000) in paragraph at lines 9111--9113 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2400] [2401] [2402] [2403]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9348 \aliasA{qr}{qr-methods}{qr} [2404] [2405] Underfull \hbox (badness 7186) in paragraph at lines 9517--9523 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2406] [2407] [2408]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) has been already used, duplicate ignored \relax l.9674 ... the Reciprocal Condition Number}{rcond} [2409] [2410] [2411] [2412] Underfull \hbox (badness 2351) in paragraph at lines 9978--9986 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 9978--9986 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2413] [2414] [2415] [2416]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.solve}) has been already used, duplicate ignored \relax l.10254 \aliasA{solve}{solve-methods}{solve} [2417] [2418] Underfull \hbox (badness 4403) in paragraph at lines 10480--10483 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2419] Underfull \hbox (badness 10000) in paragraph at lines 10550--10553 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10586--10589 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10597--10601 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2420] [2421] [2422] [2423] [2424] [2425] [2426] [2427] Underfull \hbox (badness 10000) in paragraph at lines 11174--11182 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11174--11182 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11199--11207 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11199--11207 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2428]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr. Q}) has been already used, duplicate ignored \relax l.11265 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2429] [2430] Underfull \hbox (badness 5036) in paragraph at lines 11451--11453 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2431] [2432] Underfull \hbox (badness 2828) in paragraph at lines 11636--11639 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11658--11661 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2433] Underfull \vbox (badness 10000) has occurred while \output is active [2434] [2435] [2436] [2437] Underfull \hbox (badness 2057) in paragraph at lines 12007--12009 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2438] [2439] Underfull \hbox (badness 10000) in paragraph at lines 12176--12181 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12182--12188 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2440] Underfull \hbox (badness 1902) in paragraph at lines 12217--12221 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2441] [2442] [2443] [2444] [2445] [2446] [2447] Underfull \hbox (badness 6910) in paragraph at lines 12816--12818 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2448] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12863. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12863. [2449] [2450]) (./boot-pkg.tex Chapter 18. [2451] [2452] [2453] [2454] [2455] [2456] [2457] [2458] [2459] [2460] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2461] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2462] Underfull \vbox (badness 10000) has occurred while \output is active [2463] [2464] [2465] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2466] [2467] [2468] [2469] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2470] [2471] [2472] [2473] [2474] [2475] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2476] [2477] Underfull \vbox (badness 10000) has occurred while \output is active [2478] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2479] [2480] [2481] [2482] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2483] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2484] [2485] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2486] [2487] [2488] [2489] [2490] [2491] [2492] [2493] [2494] [2495] [2496] [2497] [2498] [2499] [2500] [2501] [2502] [2503] [2504] [2505] [2506] [2507] [2508] [2509] [2510] [2511] [2512] [2513] [2514] [2515] [2516] [2517] [2518] [2519] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2520] [2521] [2522] [2523] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2524] [2525] [2526] [2527] [2528] [2529] [2530] [2531] [2532] [2533] [2534] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2535] [2536] [2537] [2538] [2539] [2540] [2541] [2542] [2543] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2544] [2545] [2546] [2547] [2548] [2549] [2550] [2551] [2552] [2553]) (./class-pkg.tex [2554] Chapter 19. [2555] [2556] [2557] [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570]) (./cluster-pkg.tex Chapter 20. [2571] [2572] [2573] [2574] [2575] Underfull \vbox (badness 7777) has occurred while \output is active [2576] [2577] [2578] [2579] [2580] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2581] [2582] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2583] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2584] [2585] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2586] [2587] [2588] [2589] [2590] [2591] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2592] [2593] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2594] [2595] [2596] [2597] [2598] [2599] [2600] [2601] Underfull \hbox (badness 10000) in paragraph at lines 2183--2186 Underfull \hbox (badness 10000) in paragraph at lines 2197--2203 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2602] [2603] [2604] [2605] Underfull \hbox (badness 6675) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2606] [2607] [2608] [2609] [2610] [2611] [2612] Underfull \hbox (badness 2980) in paragraph at lines 2962--2966 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2613] [2614] [2615] [2616] [2617] [2618] Underfull \hbox (badness 1142) in paragraph at lines 3303--3306 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2619] [2620] Underfull \hbox (badness 1142) in paragraph at lines 3422--3425 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2621] [2622] [2623] Underfull \hbox (badness 2582) in paragraph at lines 3645--3650 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2624] Underfull \hbox (badness 2698) in paragraph at lines 3707--3712 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3707--3712 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2625] [2626] [2627] [2628] [2629] Underfull \hbox (badness 10000) in paragraph at lines 3999--4001 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2630] [2631] [2632] [2633] Underfull \hbox (badness 2626) in paragraph at lines 4228--4233 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2634] Underfull \hbox (badness 1383) in paragraph at lines 4306--4311 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2635] [2636] [2637] [2638] [2639] [2640] [2641] Underfull \hbox (badness 10000) in paragraph at lines 4750--4752 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2642] [2643]) (./codetools-pkg.tex [2644] Chapter 21. [2645] [2646] [2647] [2648] [2649]) (./foreign-pkg.tex [2650] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2651] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2652] [2653] [2654] [2655] [2656] [2657] [2658] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, Underfull \hbox (badness 7133) in paragraph at lines 550--558 []\T1/ptm/m/n/10 URL [][]$\T1/zi4/m/it/10 https : / / docs . microsoft . com / en-[]us / windows / win32 / intl / code-[]page-[]identifiers$[][] [2659] Overfull \hbox (6.73795pt too wide) in paragraph at lines 624--624 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2660] [2661] [2662] Underfull \hbox (badness 10000) in paragraph at lines 812--813 [2663] Underfull \hbox (badness 10000) in paragraph at lines 869--873 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2664] [2665] Underfull \hbox (badness 10000) in paragraph at lines 990--992 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2666] [2667] [2668] [2669] Underfull \hbox (badness 10000) in paragraph at lines 1270--1276 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2670] [2671]) (./lattice-pkg.tex [2672] Chapter 23. [2673] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2674] [2675] [2676] [2677] [2678] [2679] [2680] [2681] [2682] [2683] [2684] [2685] [2686] [2687] [2688] Underfull \hbox (badness 1062) in paragraph at lines 1398--1402 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2689] Underfull \vbox (badness 4416) has occurred while \output is active [2690] Underfull \hbox (badness 1803) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2691] [2692] [2693] Underfull \hbox (badness 3009) in paragraph at lines 1725--1727 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1755--1759 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2694] [2695] [2696] [2697] [2698] Underfull \hbox (badness 10000) in paragraph at lines 2141--2144 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2699] [2700] [2701] [2702] [2703] [2704] [2705] [2706] [2707] [2708] Underfull \hbox (badness 2781) in paragraph at lines 2849--2851 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2709] [2710] Underfull \hbox (badness 2486) in paragraph at lines 3001--3005 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2711] [2712] [2713] [2714] [2715] [2716]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.parallel}) has been already used, duplicate ign ored \relax l.3475 \aliasA{parallel}{B\_08\_splom}{parallel} [2717] [2718] [2719] [2720] [2721] [2722] [2723] [2724] Underfull \hbox (badness 5696) in paragraph at lines 3970--3974 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2725] Underfull \hbox (badness 1173) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in [2726] Underfull \hbox (badness 3219) in paragraph at lines 4136--4138 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2727] [2728] Underfull \hbox (badness 3492) in paragraph at lines 4336--4346 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , [2729] Underfull \hbox (badness 10000) in paragraph at lines 4361--4364 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4364--4366 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2730] [2731] [2732] [2733] [2734] [2735] [2736] [2737] [2738] Underfull \hbox (badness 6157) in paragraph at lines 5087--5090 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2739] [2740] [2741] [2742] [2743] [2744] [2745] Underfull \hbox (badness 10000) in paragraph at lines 5545--5548 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5545--5548 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2746] [2747] [2748] [2749] [2750] Underfull \hbox (badness 4805) in paragraph at lines 5907--5911 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 5918--5925 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 5918--5925 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 5918--5925 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2751] [2752] [2753] [2754] Underfull \hbox (badness 4242) in paragraph at lines 6218--6223 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6218--6223 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2755] [2756] Underfull \hbox (badness 2310) in paragraph at lines 6334--6339 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2757] [2758] [2759] [2760] [2761] [2762] [2763] [2764] [2765] [2766] [2767] Underfull \hbox (badness 3168) in paragraph at lines 7116--7120 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2768] [2769] [2770] [2771] Underfull \hbox (badness 2012) in paragraph at lines 7387--7390 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2772] [2773] Underfull \hbox (badness 3333) in paragraph at lines 7559--7561 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing [2774] [2775] [2776] Underfull \vbox (badness 10000) has occurred while \output is active [2777] [2778] [2779] Underfull \hbox (badness 1436) in paragraph at lines 7973--7979 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2780] [2781] [2782] [2783] [2784] [2785] [2786] [2787] Underfull \hbox (badness 10000) in paragraph at lines 8531--8534 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2788] Underfull \hbox (badness 1092) in paragraph at lines 8577--8579 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2789] [2790] Underfull \hbox (badness 3895) in paragraph at lines 8738--8741 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2791] Underfull \hbox (badness 1515) in paragraph at lines 8814--8818 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2792] [2793] Underfull \hbox (badness 6316) in paragraph at lines 8920--8925 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 8937--8940 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2794] [2795] [2796] [2797] Underfull \hbox (badness 1728) in paragraph at lines 9228--9232 []\T1/ptm/m/n/10 Returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2798] [2799] [2800] [2801] [2802] [2803] [2804] Underfull \hbox (badness 2310) in paragraph at lines 9692--9696 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9697--9700 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2805] [2806] [2807]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma}) has been already used, duplicate ignored \relax l.9923 \aliasA{melanoma}{H\_melanoma}{melanoma} [2808] [2809] [2810] Underfull \hbox (badness 4144) in paragraph at lines 10147--10150 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10147--10150 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2811] [2812]) (./mgcv-pkg.tex Chapter 24. [2813] [2814] [2815] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2816] [2817] [2818] [2819] Underfull \hbox (badness 10000) in paragraph at lines 378--385 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 378--385 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2820] [2821] [2822] [2823] [2824] Underfull \hbox (badness 1406) in paragraph at lines 703--704 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2825] [2826] [2827] Underfull \hbox (badness 1158) in paragraph at lines 813--815 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion Underfull \hbox (badness 1259) in paragraph at lines 876--877 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2828] [2829] [2830] [2831] [2832] Underfull \hbox (badness 1281) in paragraph at lines 1160--1161 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2833] [2834] Underfull \vbox (badness 10000) has occurred while \output is active [2835] Underfull \vbox (badness 10000) has occurred while \output is active [2836] [2837] Underfull \vbox (badness 10000) has occurred while \output is active [2838] [2839] [2840] [2841] [2842] [2843] [2844] [2845] [2846] [2847] [2848] [2849] [2850] [2851] [2852] [2853] Underfull \hbox (badness 1142) in paragraph at lines 2361--2365 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 2387--2392 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2854] [2855] [2856] [2857] [2858] [2859] Underfull \vbox (badness 10000) has occurred while \output is active [2860] Underfull \vbox (badness 10000) has occurred while \output is active [2861] [2862] [2863] [2864] [2865] [2866] [2867] [2868] [2869] [2870] [2871] [2872] [2873] [2874] [2875] [2876] [2877] Underfull \hbox (badness 10000) in paragraph at lines 3822--3826 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2878] [2879] Underfull \vbox (badness 10000) has occurred while \output is active [2880] [2881] [2882] Underfull \hbox (badness 1184) in paragraph at lines 4108--4112 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2883] [2884] [2885] [2886] [2887] [2888] [2889] [2890] [2891] [2892] [2893] [2894] Underfull \hbox (badness 1142) in paragraph at lines 4829--4833 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2895] Underfull \hbox (badness 1231) in paragraph at lines 4933--4935 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2896] [2897] [2898] Underfull \vbox (badness 10000) has occurred while \output is active [2899] [2900] [2901] [2902] Underfull \hbox (badness 2181) in paragraph at lines 5377--5378 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2903] [2904] [2905] [2906] [2907] [2908] [2909] Underfull \hbox (badness 10000) in paragraph at lines 5766--5767 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2910] [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] Underfull \hbox (badness 1142) in paragraph at lines 6351--6355 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2921] [2922] [2923] Underfull \vbox (badness 10000) has occurred while \output is active [2924] [2925] [2926] [2927] Underfull \hbox (badness 1087) in paragraph at lines 6723--6724 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2928] [2929] Underfull \vbox (badness 10000) has occurred while \output is active [2930] Underfull \vbox (badness 10000) has occurred while \output is active [2931] [2932] [2933] [2934] [2935] [2936] [2937] [2938] [2939] [2940] [2941] [2942] [2943] Underfull \hbox (badness 1242) in paragraph at lines 7672--7673 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] [2953] [2954] Underfull \hbox (badness 6001) in paragraph at lines 8312--8314 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] [2964] Underfull \vbox (badness 10000) has occurred while \output is active [2965] [2966] Underfull \hbox (badness 1038) in paragraph at lines 9061--9064 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9061--9064 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [2967] Underfull \hbox (badness 10000) in paragraph at lines 9117--9120 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [2968] [2969] [2970] [2971] [2972] [2973] [2974] [2975] [2976] [2977] [2978] Underfull \hbox (badness 1852) in paragraph at lines 9790--9793 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2979] [2980] [2981] Underfull \hbox (badness 1852) in paragraph at lines 9959--9962 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2982] [2983] Underfull \vbox (badness 10000) has occurred while \output is active [2984] [2985] Underfull \hbox (badness 1205) in paragraph at lines 10191--10193 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10191--10193 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10197--10202 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [2986] Underfull \hbox (badness 1205) in paragraph at lines 10281--10283 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10281--10283 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [2987] [2988] [2989] Underfull \hbox (badness 1253) in paragraph at lines 10480--10482 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [2990] [2991] [2992] [2993] [2994] [2995] Underfull \hbox (badness 4792) in paragraph at lines 10741--10744 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10741--10744 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [2996] Underfull \hbox (badness 10000) in paragraph at lines 10848--10851 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [2997] [2998] [2999] [3000] [3001] [3002] [3003] [3004] [3005] [3006] [3007] [3008] [3009] Underfull \vbox (badness 10000) has occurred while \output is active [3010] Underfull \hbox (badness 3861) in paragraph at lines 11637--11640 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3011] [3012] Underfull \hbox (badness 1320) in paragraph at lines 11752--11757 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3013] Underfull \hbox (badness 1975) in paragraph at lines 11858--11863 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3014] [3015] Underfull \hbox (badness 1762) in paragraph at lines 11947--11959 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3016] [3017] [3018] Underfull \hbox (badness 7667) in paragraph at lines 12159--12165 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3019] Underfull \hbox (badness 10000) in paragraph at lines 12200--12201 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3020] [3021] [3022] [3023] Underfull \vbox (badness 10000) has occurred while \output is active [3024] Underfull \hbox (badness 10000) in paragraph at lines 12477--12479 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3025] [3026] Underfull \hbox (badness 10000) in paragraph at lines 12607--12608 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3027] [3028] [3029] Underfull \hbox (badness 1436) in paragraph at lines 12745--12752 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3030] [3031] Underfull \hbox (badness 10000) in paragraph at lines 12840--12841 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3032] [3033] [3034] [3035] [3036] [3037] [3038] [3039] [3040] [3041] Underfull \hbox (badness 10000) in paragraph at lines 13441--13447 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13441--13447 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3042] [3043] [3044] Underfull \vbox (badness 10000) has occurred while \output is active [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] [3047] Underfull \hbox (badness 10000) in paragraph at lines 13784--13785 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3048] [3049] [3050] [3051] Underfull \hbox (badness 3895) in paragraph at lines 14044--14047 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3052] Underfull \hbox (badness 10000) in paragraph at lines 14089--14091 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3053] [3054] [3055] [3056] [3057] Underfull \hbox (badness 1371) in paragraph at lines 14363--14369 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14403--14407 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3058] [3059] [3060] [3061] Underfull \hbox (badness 2326) in paragraph at lines 14608--14615 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3062] Underfull \hbox (badness 2158) in paragraph at lines 14693--14693 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3063] [3064] [3065] [3066] [3067] [3068] [3069] [3070] [3071] [3072] [3073] [3074] [3075] [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] Underfull \hbox (badness 1796) in paragraph at lines 16342--16345 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3091] [3092] [3093] [3094] [3095] [3096] [3097] [3098] [3099]) (./nlme-pkg.tex [3100] Chapter 25. [3101] [3102] [3103] [3104] [3105] [3106] [3107] [3108] [3109] [3110] [3111] [3112] [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] Underfull \hbox (badness 10000) in paragraph at lines 2258--2264 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3135] [3136] [3137] [3138] [3139] [3140] [3141] [3142] [3143] [3144] [3145] [3146] [3147] [3148] [3149pdfTeX warning (ext4): destination with the same iden tifier (name{Rfn.corMatrix.corCompSymm}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.3194 ] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] Underfull \hbox (badness 1067) in paragraph at lines 4419--4424 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] Underfull \hbox (badness 10000) in paragraph at lines 5165--5169 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3180] [3181] [3182] [3183] [3184] [3185] [3186] Underfull \hbox (badness 10000) in paragraph at lines 5597--5600 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3187] [3188] [3189] [3190] [3191] [3192] [3193] Underfull \hbox (badness 10000) in paragraph at lines 5978--5983 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3194] [3195] [3196] [3197] Underfull \hbox (badness 1490) in paragraph at lines 6248--6259 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3198] Underfull \hbox (badness 10000) in paragraph at lines 6312--6314 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3199] [3200] [3201] [3202] [3203] [3204] Underfull \hbox (badness 10000) in paragraph at lines 6725--6727 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3205] [3206] [3207] [3208] Underfull \hbox (badness 10000) in paragraph at lines 6997--7004 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3209] [3210] [3211] [3212] Underfull \hbox (badness 10000) in paragraph at lines 7257--7262 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3213] [3214] [3215] [3216] [3217] [3218] [3219] [3220] [3221] [3222] [3223] [3224] [3225] [3226] [3227] [3228] [3229] [3230] [3231] Underfull \hbox (badness 10000) in paragraph at lines 8525--8527 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3232] [3233] [3234] [3235] [3236] Underfull \hbox (badness 10000) in paragraph at lines 8804--8811 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3237] [3238] [3239] [3240] [3241] [3242] [3243] [3244] Underfull \hbox (badness 10000) in paragraph at lines 9326--9333 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3245] [3246] [3247] [3248] [3249]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9688 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.Matrix.1}) has been already used, dupl icate ignored \relax l.9688 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3250] [3251] [3252] [3253] [3254] [3255] [3256] [3257] [3258] [3259] [3260] [3261] Underfull \hbox (badness 1596) in paragraph at lines 10461--10487 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3262] [3263] Underfull \hbox (badness 1490) in paragraph at lines 10599--10605 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3264] [3265] [3266] [3267] Underfull \hbox (badness 10000) in paragraph at lines 10840--10842 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3268] [3269] [3270] [3271] [3272] [3273] [3274] [3275] [3276] [3277] [3278] [3279] [3280] [3281] [3282] [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] [3291] [3292] [3293] [3294] [3295] [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] Underfull \hbox (badness 1286) in paragraph at lines 13737--13744 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3310] [3311] [3312] [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330]pdfTeX war ning (ext4): destination with the same identifier (name{Rfn.random.effects}) ha s been already used, duplicate ignored \relax l.15180 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.random.effects.1}) has been already us ed, duplicate ignored \relax l.15180 ...Extract Random Effects}{random.effects} [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] Underfull \hbox (badness 3884) in paragraph at lines 15820--15824 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15820--15824 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15820--15824 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3341] [3342] Underfull \hbox (badness 1067) in paragraph at lines 15932--15937 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3343] [3344] [3345] [3346] Underfull \hbox (badness 1448) in paragraph at lines 16175--16184 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/it/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3347] [3348] [3349] [3350] [3351] [3352] [3353] [3354] [3355] [3356] Underfull \hbox (badness 1728) in paragraph at lines 16879--16882 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3357] [3358] [3359] [3360] [3361] Underfull \hbox (badness 8056) in paragraph at lines 17214--17223 \T1/zi4/m/it/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/it /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17214--17223 \T1/zi4/m/it/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17214--17223 \T1/zi4/m/it/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3362] [3363] [3364] [3365] [3366] Underfull \hbox (badness 10000) in paragraph at lines 17536--17544 [][][]\T1/zi4/m/it/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varPower[][][][]\T1/ptm/m/n/10 , [3367] [3368] [3369] [3370] [3371] [3372] [3373] [3374] [3375] [3376] Underfull \hbox (badness 10000) in paragraph at lines 18246--18256 [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18246--18256 [][][]\T1/zi4/m/it/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3377] [3378] [3379] [3380] [3381] Underfull \hbox (badness 5036) in paragraph at lines 18570--18579 [][][]\T1/zi4/m/it/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3382] [3383] [3384] [3385] [3386] [3387] [3388] [3389] [3390] [3391] [3392] [3393] [3394]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.multinom.1}) has been already used, du plicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3395] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [3396] [3397] [3398] [3399] [3400] [3401] [3402]) (./rpart-pkg.tex Chapter 27. [3403] [3404] [3405] [3406] [3407] [3408] [3409] [3410] [3411] [3412] [3413] [3414] [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] [3423] [3424] [3425] [3426] [3427] [3428] [3429] [3430] [3431]) (./spatial-pkg.tex [3432] Chapter 28. [3433] [3434] [3435] [3436] [3437] [3438] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3439] [3440] [3441] [3442] [3443] [3444] [3445] [3446] [3447] [3448] [3449] [3450] [3451]) (./survival-pkg.tex [3452] Chapter 29. [3453] [3454] [3455] [3456] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3457] [3458]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.aml.1}) has been already used, duplica te ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3459] [3460] [3461] [3462] Overfull \vbox (3.85637pt too high) has occurred while \output is active [3463] [3464] [3465] [3466] [3467] [3468] [3469] Underfull \hbox (badness 1097) in paragraph at lines 1108--1110 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3470] [3471] [3472]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) has been already used, duplicate ignored \relax l.1310 ...erapy for Stage B/C colon cancer}{colon} [3473] Underfull \hbox (badness 3679) in paragraph at lines 1358--1362 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/it/10 table(colon$nodes, [3474] [3475] [3476] [3477] [3478] [3479] [3480] Underfull \hbox (badness 3250) in paragraph at lines 1943--1958 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/it/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 1943--1958 []\T1/zi4/m/it/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3481] [3482] [3483] [3484] [3485] [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493] [3494] [3495] [3496] [3497] [3498] [3499] [3500] Underfull \hbox (badness 1389) in paragraph at lines 3305--3307 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3501] [3502] [3503] [3504] Overfull \hbox (467.89665pt too wide) in alignment at lines 3591--3591 [] [] [3505] [3506] [3507] [3508] [3509] [3510] [3511] [3512] [3513] [3514] [3515] [3516] Underfull \vbox (badness 1533) has occurred while \output is active [3517] [3518] [3519] [3520] [3521] [3522] [3523] [3524] [3525] [3526] [3527] [3528] [3529] [3530] Underfull \hbox (badness 5274) in paragraph at lines 5325--5327 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3531] [3532] [3533] [3534] [3535] [3536] [3537] [3538] [3539] [3540] [3541] [3542] Underfull \vbox (badness 3168) has occurred while \output is active [3543] [3544] [3545] [3546] [3547] [3548] Underfull \hbox (badness 1281) in paragraph at lines 6575--6578 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/it/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/it/10 "dfbeta"[]\T1/ptm/m/n/10 , [3549] [3550] [3551] [3552] [3553] [3554] [3555] [3556]pdfTeX warning (ext4): d estination with the same identifier (name{Rfn.solder}) has been already used, d uplicate ignored \relax l.7134 ...ata from a soldering experiment}{solder} [3557] Underfull \vbox (badness 1622) has occurred while \output is active [3558] [3559] [3560] [3561] [3562] [3563] [3564] [3565] [3566] [3567] [3568] [3569] [3570] [3571] [3572] [3573] [3574] [3575] [3576] [3577] Underfull \hbox (badness 1038) in paragraph at lines 8630--8636 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3578] [3579] [3580] [3581] [3582] Underfull \hbox (badness 10000) in paragraph at lines 8988--8993 [][][]\T1/zi4/m/it/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] [3591] [3592] [3593] [3594] Underfull \hbox (badness 1354) in paragraph at lines 9928--9932 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. 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at lines 6002--6004 []\T1/zi4/m/it/10 Arith,triangularMatrix,diagonalMatrix-method [3671] [3672] [3673] Overfull \hbox (15.01662pt too wide) in paragraph at lines 6666--6668 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3674] [3675] [3676] Overfull \hbox (0.8567pt too wide) in paragraph at lines 7334--7336 []\T1/zi4/m/it/10 cbind2,denseMatrix,sparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 7336--7338 []\T1/zi4/m/it/10 cbind2,diagonalMatrix,sparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 7366--7368 []\T1/zi4/m/it/10 cbind2,sparseMatrix,denseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 7368--7370 []\T1/zi4/m/it/10 cbind2,sparseMatrix,diagonalMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 7374--7376 []\T1/zi4/m/it/10 cbind2,sparseMatrix,sparseMatrix-method [3677] [3678] [3679] [3680] Overfull \hbox (10.8567pt too wide) in paragraph at lines 8135--8137 []\T1/zi4/m/it/10 coerce,atomicVector,dsparseVector-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8137--8139 []\T1/zi4/m/it/10 coerce,atomicVector,sparseVector-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8147--8149 []\T1/zi4/m/it/10 coerce,CHMfactor,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8151--8153 []\T1/zi4/m/it/10 coerce,CsparseMatrix,denseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8155--8157 []\T1/zi4/m/it/10 coerce,CsparseMatrix,lsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8157--8159 []\T1/zi4/m/it/10 coerce,CsparseMatrix,matrix.coo-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8159--8161 []\T1/zi4/m/it/10 coerce,CsparseMatrix,matrix.csc-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8161--8163 []\T1/zi4/m/it/10 coerce,CsparseMatrix,matrix.csr-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8165--8167 []\T1/zi4/m/it/10 coerce,CsparseMatrix,nsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8167--8169 []\T1/zi4/m/it/10 coerce,CsparseMatrix,RsparseMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8169--8171 []\T1/zi4/m/it/10 coerce,CsparseMatrix,sparseVector-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 8171--8173 []\T1/zi4/m/it/10 coerce,CsparseMatrix,symmetricMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8173--8175 []\T1/zi4/m/it/10 coerce,CsparseMatrix,TsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8193--8195 []\T1/zi4/m/it/10 coerce,ddiMatrix,symmetricMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8195--8197 []\T1/zi4/m/it/10 coerce,ddiMatrix,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8199--8201 []\T1/zi4/m/it/10 coerce,denseMatrix,CsparseMatrix-method 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at lines 8515--8517 []\T1/zi4/m/it/10 coerce,lgeMatrix,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8529--8531 []\T1/zi4/m/it/10 coerce,lgTMatrix,symmetricMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8531--8533 []\T1/zi4/m/it/10 coerce,lgTMatrix,triangularMatrix-method [3684] Overfull \hbox (15.8567pt too wide) in paragraph at lines 8557--8559 []\T1/zi4/m/it/10 coerce,lsparseMatrix,dsparseMatrix-method [3685] [3686] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8743--8745 []\T1/zi4/m/it/10 coerce,matrix.coo,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8751--8753 []\T1/zi4/m/it/10 coerce,matrix.coo,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8753--8755 []\T1/zi4/m/it/10 coerce,matrix.csc,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8759--8761 []\T1/zi4/m/it/10 coerce,matrix.csc,TsparseMatrix-method Overfull \hbox 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)\T1/ptm/m/n/10 , [3695] Overfull \hbox (15.01662pt too wide) in paragraph at lines 10092--10094 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.cr.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 10097--10099 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ps.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 10105--10107 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3696] Overfull \hbox (5.8567pt too wide) in paragraph at lines 10454--10456 []\T1/zi4/m/it/10 determinant,ddenseMatrix,logical-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10456--10458 []\T1/zi4/m/it/10 determinant,ddenseMatrix,missing-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 10464--10466 []\T1/zi4/m/it/10 determinant,diagonalMatrix,logical-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 10478--10480 []\T1/zi4/m/it/10 determinant,dsparseMatrix,logical-method [3697] Overfull \hbox (5.8567pt too wide) in paragraph at lines 10498--10500 []\T1/zi4/m/it/10 determinant,sparseMatrix,logical-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10500--10502 []\T1/zi4/m/it/10 determinant,sparseMatrix,missing-method [3698] [3699] [3700] Overfull \hbox (15.01662pt too wide) in paragraph at lines 11224--11226 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ds.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3701] [3702] Overfull \hbox (15.01662pt too wide) in paragraph at lines 11755--11757 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.fs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3703] [3704] Overfull \hbox (15.8567pt too wide) in paragraph at lines 12104--12106 []\T1/zi4/m/it/10 forceSymmetric,corMatrix,character-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 12106--12108 []\T1/zi4/m/it/10 forceSymmetric,corMatrix,missing-method Overfull \hbox (5.8567pt too 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wide) in paragraph at lines 13128--13130 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3709] [3710] [3711] [3712] [3713] [3714] [3715] [3716] Overfull \hbox (0.8567pt too wide) in paragraph at lines 14710--14712 []\T1/zi4/m/it/10 kronecker,diagonalMatrix,Matrix-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 14712--14714 []\T1/zi4/m/it/10 kronecker,dsparseMatrix,dsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 14722--14724 []\T1/zi4/m/it/10 kronecker,Matrix,diagonalMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 14726--14728 []\T1/zi4/m/it/10 kronecker,sparseMatrix,TsparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 14728--14730 []\T1/zi4/m/it/10 kronecker,TsparseMatrix,sparseMatrix-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 14730--14732 []\T1/zi4/m/it/10 kronecker,TsparseMatrix,TsparseMatrix-method [3717] [3718] 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{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}{/usr/share/texlive/ texmf-dist/fonts/enc/dvips/cm-super/cm-super-ts1.enc}{/usr/share/texlive/texmf- dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}{/usr/share/texlive/texmf-dist/font s/enc/dvips/inconsolata/i4-t1-0.enc}< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr5.pfb> Output written on fullrefman.pdf (3825 pages, 10650089 bytes). Transcript written on fullrefman.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-FAQ.texi @setfilename R-FAQ.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texlive/te xmf-var/fonts/map/pdftex/updmap/pdftex.map}] [-1] Chapter 1 Cross reference values unknown; you must run TeX again. [1] Chapter 2 [2] Underfull \hbox (badness 10000) in paragraph at lines 290--312 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 642--645 []@textrm Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat-ics'' . Underfull \hbox (badness 7379) in paragraph at lines 642--645 @textrm Chap-man & Hall/CRC, Boca Ra-ton, FL, ISBN 978-1-420-06367-7, Underfull \hbox (badness 10000) in paragraph at lines 642--645 [][]@texttt https:// master. bioconductor. org/ help/ publications/ book s/ [7] Underfull \hbox (badness 10000) in paragraph at lines 669--674 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] [18] Underfull \hbox (badness 10000) in paragraph at lines 1536--1539 []@textrm See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_progra mming_language# Underfull \hbox (badness 10000) in paragraph at lines 1536--1539 @texttt Commercialized_versions_of_R[][][] @textrm for point-ers to com-mer-cia l-ized ver-sions of Chapter 4 [19] Chapter 5 [20] [21] [22] [23] [24] Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] Writing index file R-FAQ.fn [39] Underfull \hbox (badness 10000) in paragraph at lines 3133--3147 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [40] [41] [42] Chapter 8 [43] Chapter 9 [44] [45] Chapter 10 [46] [47] [48] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (50 pages, 353687 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texlive/te xmf-var/fonts/map/pdftex/updmap/pdftex.map}] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.aux) [1] Chapter 2 [2] Underfull \hbox (badness 10000) in paragraph at lines 290--312 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 642--645 []@textrm Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat-ics'' . Underfull \hbox (badness 7379) in paragraph at lines 642--645 @textrm Chap-man & Hall/CRC, Boca Ra-ton, FL, ISBN 978-1-420-06367-7, Underfull \hbox (badness 10000) in paragraph at lines 642--645 [][]@texttt https:// master. bioconductor. org/ help/ publications/ book s/ [7] Underfull \hbox (badness 10000) in paragraph at lines 669--674 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] [18] Underfull \hbox (badness 10000) in paragraph at lines 1536--1539 []@textrm See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_progra mming_language# Underfull \hbox (badness 10000) in paragraph at lines 1536--1539 @texttt Commercialized_versions_of_R[][][] @textrm for point-ers to com-mer-cia l-ized ver-sions of Chapter 4 [19] Chapter 5 [20] [21] [22] [23] [24] Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] Writing index file R-FAQ.fn [39] Underfull \hbox (badness 10000) in paragraph at lines 3133--3147 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [40] [41] [42] Chapter 8 [43] Chapter 9 [44] [45] Chapter 10 [46] [47] [48] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (52 pages, 369871 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texlive/te xmf-var/fonts/map/pdftex/updmap/pdftex.map}] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.1/doc/manual/R-FAQ.aux) [1] Chapter 2 [2] Underfull \hbox (badness 10000) in paragraph at lines 290--312 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 642--645 []@textrm Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat-ics'' . Underfull \hbox (badness 7379) in paragraph at lines 642--645 @textrm Chap-man & Hall/CRC, Boca Ra-ton, FL, ISBN 978-1-420-06367-7, Underfull \hbox (badness 10000) in paragraph at lines 642--645 [][]@texttt https:// master. bioconductor. org/ help/ publications/ book s/ [7] Underfull \hbox (badness 10000) in paragraph at lines 669--674 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] [18] Underfull \hbox (badness 10000) in paragraph at lines 1536--1539 []@textrm See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_progra mming_language# Underfull \hbox (badness 10000) in paragraph at lines 1536--1539 @texttt Commercialized_versions_of_R[][][] @textrm for point-ers to com-mer-cia l-ized ver-sions of Chapter 4 [19] Chapter 5 [20] [21] [22] [23] [24] Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] Writing index file R-FAQ.fn [39] Underfull \hbox (badness 10000) in paragraph at lines 3133--3147 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [40] [41] [42] Chapter 8 [43] Chapter 9 [44] [45] Chapter 10 [46] [47] [48] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (52 pages, 369870 bytes). Transcript written on R-FAQ.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-admin.texi @setfilename R-admin.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-admin.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-admin.cp Writing index file R-admin.en Underfull \hbox (badness 10000) in paragraph at lines 151--156 []@textrm The tar-balls are avail-able from [][]@texttt https:// stat. ethz. ch/ R/ daily/ [][][]@textrm . Down-load [1] Chapter 2 [2] Cross reference values unknown; you must run TeX again. [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1501--1505 []@textrm Parallel check-ing of pack-age sources (part of @texttt make check-de vel[] @textrm and @texttt make Chapter 4 [17] [18] [19] [20] Chapter 5 [21] Chapter 6 [22] [23] [24] [25] [26] Overfull \hbox (56.55324pt too wide) in paragraph at lines 2334--2334 []@texttt ./configure CC="clang -arch arm64" CFLAGS=-O2 CXX="clang++ -arch arm 64" CXXFLAGS=-O2[] [27] [28] [29] [30] Chapter 7 [31] [32] [33] Chapter 8 [34] Chapter 9 [35] [36] Appendix A [37] [38] [39] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3287--3287 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] Appendix B [50] [51] [52] [53] [54] Appendix C [55] [56] [57] [58] [59] [60] Overfull \hbox (112.72658pt too wide) in paragraph at lines 5126--5126 []@texttt curl -OL https://mac.r-project.org/bin/darwin17/x86_64/pcre2-10.39-d arwin.17-x86_64.tar.xz[] Overfull \hbox (95.48051pt too wide) in paragraph at lines 5128--5128 []@texttt curl -OL https://mac.r-project.org/bin/darwin17/x86_64/xz-5.2.5-darw in.17-x86_64.tar.xz[] [61] Overfull \hbox (17.16873pt too wide) in paragraph at lines 5274--5275 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][][]@smallrm .| [62] Underfull \hbox (badness 10000) in paragraph at lines 5302--5306 @textrm Mon-terey there is [][]@texttt https:// github. com/ fxcoudert/ gfo rtran-for-macOS/ releases/ Overfull \hbox (62.30193pt too wide) in paragraph at lines 5367--5367 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:$LOCAL/lib/pkgconfig:/ usr/lib/pkgconfig[] [63] Overfull \hbox (51.1502pt too wide) in paragraph at lines 5472--5472 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][][]| [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 5789--5795 @textrm in @texttt src/Makevars[]@textrm . It would also be pos-si-ble to stat ic link the For- Underfull \hbox (badness 10000) in paragraph at lines 5789--5795 @textrm tran run-time li-braries @texttt /usr/local/gfortran/lib/libgfortran.a [] @textrm and Underfull \hbox (badness 10000) in paragraph at lines 5789--5795 @texttt /usr/local/gfortran/lib/libquadmath.a[] @textrm should the For-tran co m-piler have [68] Overfull \hbox (22.06111pt too wide) in paragraph at lines 5975--5975 []@texttt FC="/usr/local/gfortran/bin/gfortran -mtune=native -mmacosx-version- min=10.13"[] [69] (Function and variable index) [70] No file R-admin.vrs. (Concept index) [71] No file R-admin.cps. (Environment variable index) [72] No file R-admin.ens. [73] ) (see the transcript file for additional information)pdfTeX warning (dest): name {\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not ex ist, replaced by a fixed one Output written on R-admin.pdf (76 pages, 469413 bytes). Transcript written on R-admin.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-admin.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.aux) Writing index file R-admin.cp Writing index file R-admin.en Underfull \hbox (badness 10000) in paragraph at lines 151--156 []@textrm The tar-balls are avail-able from [][]@texttt https:// stat. ethz. ch/ R/ daily/ [][][]@textrm . Down-load [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1501--1505 []@textrm Parallel check-ing of pack-age sources (part of @texttt make check-de vel[] @textrm and @texttt make Chapter 4 [17] [18] [19] [20] Chapter 5 [21] Chapter 6 [22] [23] [24] [25] [26] Overfull \hbox (56.55324pt too wide) in paragraph at lines 2334--2334 []@texttt ./configure CC="clang -arch arm64" CFLAGS=-O2 CXX="clang++ -arch arm 64" CXXFLAGS=-O2[] [27] [28] [29] [30] Chapter 7 [31] [32] [33] Chapter 8 [34] Chapter 9 [35] [36] Appendix A [37] [38] [39] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3287--3287 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] Appendix B [50] [51] [52] [53] [54] Appendix C [55] [56] [57] [58] [59] [60] Overfull \hbox (112.72658pt too wide) in paragraph at lines 5126--5126 []@texttt curl -OL https://mac.r-project.org/bin/darwin17/x86_64/pcre2-10.39-d arwin.17-x86_64.tar.xz[] Overfull \hbox (95.48051pt too wide) in paragraph at lines 5128--5128 []@texttt curl -OL https://mac.r-project.org/bin/darwin17/x86_64/xz-5.2.5-darw in.17-x86_64.tar.xz[] l.5175: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5175: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5175: Undefined cross reference ` Tcl/Tk headers and libraries-pg'. [61] Overfull \hbox (17.16873pt too wide) in paragraph at lines 5274--5275 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][][]@smallrm .| [62] Underfull \hbox (badness 10000) in paragraph at lines 5302--5306 @textrm Mon-terey there is [][]@texttt https:// github. com/ fxcoudert/ gfo rtran-for-macOS/ releases/ Overfull \hbox (62.30193pt too wide) in paragraph at lines 5367--5367 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:$LOCAL/lib/pkgconfig:/ usr/lib/pkgconfig[] [63] Overfull \hbox (51.1502pt too wide) in paragraph at lines 5472--5472 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][][]| [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 5789--5795 @textrm in @texttt src/Makevars[]@textrm . It would also be pos-si-ble to stat ic link the For- Underfull \hbox (badness 10000) in paragraph at lines 5789--5795 @textrm tran run-time li-braries @texttt /usr/local/gfortran/lib/libgfortran.a [] @textrm and Underfull \hbox (badness 10000) in paragraph at lines 5789--5795 @texttt /usr/local/gfortran/lib/libquadmath.a[] @textrm should the For-tran co m-piler have [68] Overfull \hbox (22.06111pt too wide) in paragraph at lines 5975--5975 []@texttt FC="/usr/local/gfortran/bin/gfortran -mtune=native -mmacosx-version- min=10.13"[] [69] (Function and variable index) [70] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.vrs) (Concept index) [71] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.cps) (Environment variable index) [72] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-admin.ens) [73] ) (see the transcript file for additional information)pdfTeX warning (dest): name {\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not ex ist, replaced by a fixed one Output written on R-admin.pdf (78 pages, 514250 bytes). Transcript written on R-admin.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-data.texi @setfilename R-data.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-data.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] No file R-data.vrs. (Concept index) [29] No file R-data.cps. [30] ) (see the transcript file for additional information) Output written on R-data.pdf (33 pages, 265836 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.toc [-1]) [-2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.aux) Chapter 1 [1] Writing index file R-data.cp [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.vrs [29]) (Concept index) [30] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.cps) [31] ) (see the transcript file for additional information) Output written on R-data.pdf (35 pages, 305716 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.toc [-1]) [-2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.aux) Chapter 1 [1] Writing index file R-data.cp [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.vrs [29]) (Concept index) [30] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-data.cps) [31] ) (see the transcript file for additional information) Output written on R-data.pdf (35 pages, 305723 bytes). Transcript written on R-data.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-exts.texi @setfilename R-exts.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-exts.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 500--503 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1538--1538 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1539--1539 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [18] Underfull \hbox (badness 10000) in paragraph at lines 1638--1648 @texttt sourceforge. net/ projects/ tktable/ files/ tktable/ 2. 10/ Tkt able2. 10. tar. gz[][][]@textrm , but [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2602--2602 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2604--2604 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [30] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2845--2848 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Overfull \hbox (39.30717pt too wide) in paragraph at lines 2917--2917 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2940--2946 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Underfull \hbox (badness 10000) in paragraph at lines 3019--3023 @textrm ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manual/ c make-env-variables. 7. html# [35] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3120--3120 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4744--4744 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4763--4763 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [54] [55] [56] [57] [58] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5205--5205 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5207--5207 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5208--5208 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5223--5223 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [59] Underfull \hbox (badness 7558) in paragraph at lines 5283--5287 @texttt /Applications/CMake.app/Contents/bin/cmake[] @textrm and that should b e looked for [60] [61] [62] [63] [64] Underfull \hbox (badness 10000) in paragraph at lines 5734--5737 @texttt gcc/ C-Extensions. html[][][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [65] [66] [67] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5958--5958 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [68] Underfull \hbox (badness 10000) in paragraph at lines 6057--6058 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [69] [70] [71] [72] [73] Underfull \hbox (badness 10000) in paragraph at lines 6508--6518 []@textrm R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-pro ject. org[]@textrm )[][]) and RForge Chapter 2 [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] Underfull \hbox (badness 10000) in paragraph at lines 7560--7567 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [87] Underfull \hbox (badness 10000) in paragraph at lines 7739--7745 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text[] @textrm part of [88] [89] [90] [91] Chapter 3 [92] [93] [94] [95] [96] [97] [98] Chapter 4 [99] [100] [101] [102] [103] [104] Underfull \hbox (badness 10000) in paragraph at lines 9024--9033 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9293--9305 @textrm See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual. htm l# controlling-code-generation[][][]@textrm , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9309--9310 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [108] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9447--9447 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [109] Underfull \hbox (badness 10000) in paragraph at lines 9480--9482 []@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [110] [111] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9626--9626 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [112] [113] [114] [115] Underfull \hbox (badness 10000) in paragraph at lines 9995--9997 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [116] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10052--10052 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10071--10071 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10082--10082 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10112--10112 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (30.03963pt too wide) in paragraph at lines 10959--10959 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11545--11545 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] Underfull \hbox (badness 10000) in paragraph at lines 12555--12559 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] Overfull \hbox (22.06111pt too wide) in paragraph at lines 13651--13651 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [157] Overfull \hbox (50.80455pt too wide) in paragraph at lines 13746--13746 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [158] Chapter 6 [159] [160] [161] [162] [163] [164] [165] Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 []@textrm Passing a variable-length string from C to For-tran is trick-ier, but Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 [][]@texttt https:// software. intel. com/ content/ www/ us/ en/ develo p/ documentation/ Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 @texttt fortran-compiler-oneapi-dev-guide-and-reference/ top/ compiler-refere nce/ Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 @texttt mixed-language-programming/ standard-tools-for-interoperability/ bind . html[][][] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] Warning: unbalanced parentheses in @def... [176] [177] [178] [179] [180] [181] Underfull \hbox (badness 10000) in paragraph at lines 15785--15791 []@textrm The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/Graphic sEngine.h[]@textrm , @texttt R_ Chapter 7 [182] [183] Chapter 8 [184] [185] [186] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16203--16203 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [187] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16261--16261 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [188] [189] [190] [191] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 16776--16783 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and [194] [195] Underfull \hbox (badness 10000) in paragraph at lines 16911--16915 []@textrm If the de-sired ar-chi-tec-ture is known, look in @texttt Software\R -core\R32[] @textrm or (Function and variable index) [196] No file R-exts.vrs. (Concept index) [197] No file R-exts.cps. [198] ) (see the transcript file for additional information) Output written on R-exts.pdf (201 pages, 954821 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 500--503 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1538--1538 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1539--1539 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [18] Underfull \hbox (badness 10000) in paragraph at lines 1638--1648 @texttt sourceforge. net/ projects/ tktable/ files/ tktable/ 2. 10/ Tkt able2. 10. tar. gz[][][]@textrm , but [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2602--2602 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2604--2604 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [30] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2845--2848 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Overfull \hbox (39.30717pt too wide) in paragraph at lines 2917--2917 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2940--2946 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Underfull \hbox (badness 10000) in paragraph at lines 3019--3023 @textrm ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manual/ c make-env-variables. 7. html# [35] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3120--3120 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4744--4744 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4763--4763 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [54] [55] [56] [57] [58] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5205--5205 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5207--5207 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5208--5208 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5223--5223 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [59] Underfull \hbox (badness 7558) in paragraph at lines 5283--5287 @texttt /Applications/CMake.app/Contents/bin/cmake[] @textrm and that should b e looked for [60] [61] [62] [63] [64] Underfull \hbox (badness 10000) in paragraph at lines 5734--5737 @texttt gcc/ C-Extensions. html[][][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [65] [66] [67] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5958--5958 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [68] Underfull \hbox (badness 10000) in paragraph at lines 6057--6058 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [69] [70] [71] [72] [73] Underfull \hbox (badness 10000) in paragraph at lines 6508--6518 []@textrm R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-pro ject. org[]@textrm )[][]) and RForge Chapter 2 [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] Underfull \hbox (badness 10000) in paragraph at lines 7560--7567 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [87] Underfull \hbox (badness 10000) in paragraph at lines 7739--7745 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text[] @textrm part of [88] [89] [90] [91] Chapter 3 [92] [93] [94] [95] [96] [97] [98] Chapter 4 [99] [100] [101] [102] [103] [104] Underfull \hbox (badness 10000) in paragraph at lines 9024--9033 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9293--9305 @textrm See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual. htm l# controlling-code-generation[][][]@textrm , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9309--9310 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [108] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9447--9447 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [109] Underfull \hbox (badness 10000) in paragraph at lines 9480--9482 []@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [110] [111] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9626--9626 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [112] [113] [114] [115] Underfull \hbox (badness 10000) in paragraph at lines 9995--9997 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [116] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10052--10052 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10071--10071 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10082--10082 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10112--10112 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (30.03963pt too wide) in paragraph at lines 10959--10959 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11545--11545 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] Underfull \hbox (badness 10000) in paragraph at lines 12555--12559 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] Overfull \hbox (22.06111pt too wide) in paragraph at lines 13651--13651 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [157] Overfull \hbox (50.80455pt too wide) in paragraph at lines 13746--13746 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [158] Chapter 6 [159] [160] [161] [162] [163] [164] [165] Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 []@textrm Passing a variable-length string from C to For-tran is trick-ier, but Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 [][]@texttt https:// software. intel. com/ content/ www/ us/ en/ develo p/ documentation/ Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 @texttt fortran-compiler-oneapi-dev-guide-and-reference/ top/ compiler-refere nce/ Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 @texttt mixed-language-programming/ standard-tools-for-interoperability/ bind . html[][][] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] Warning: unbalanced parentheses in @def... [176] [177] [178] [179] [180] [181] Underfull \hbox (badness 10000) in paragraph at lines 15785--15791 []@textrm The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/Graphic sEngine.h[]@textrm , @texttt R_ Chapter 7 [182] [183] Chapter 8 [184] [185] [186] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16203--16203 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [187] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16261--16261 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [188] [189] [190] [191] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 16776--16783 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and [194] [195] Underfull \hbox (badness 10000) in paragraph at lines 16911--16915 []@textrm If the de-sired ar-chi-tec-ture is known, look in @texttt Software\R -core\R32[] @textrm or (Function and variable index) [196] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.vrs [197] [198] [199] [200]) (Concept index) [201] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.cps [202]) [203] ) (see the transcript file for additional information) Output written on R-exts.pdf (209 pages, 1032317 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 500--503 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1538--1538 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1539--1539 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [18] Underfull \hbox (badness 10000) in paragraph at lines 1638--1648 @texttt sourceforge. net/ projects/ tktable/ files/ tktable/ 2. 10/ Tkt able2. 10. tar. gz[][][]@textrm , but [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2602--2602 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2604--2604 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [30] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2845--2848 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Overfull \hbox (39.30717pt too wide) in paragraph at lines 2917--2917 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2940--2946 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Underfull \hbox (badness 10000) in paragraph at lines 3019--3023 @textrm ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manual/ c make-env-variables. 7. html# [35] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3120--3120 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4744--4744 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4763--4763 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [54] [55] [56] [57] [58] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5205--5205 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5207--5207 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5208--5208 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5223--5223 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [59] Underfull \hbox (badness 7558) in paragraph at lines 5283--5287 @texttt /Applications/CMake.app/Contents/bin/cmake[] @textrm and that should b e looked for [60] [61] [62] [63] [64] Underfull \hbox (badness 10000) in paragraph at lines 5734--5737 @texttt gcc/ C-Extensions. html[][][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [65] [66] [67] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5958--5958 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [68] Underfull \hbox (badness 10000) in paragraph at lines 6057--6058 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [69] [70] [71] [72] [73] Underfull \hbox (badness 10000) in paragraph at lines 6508--6518 []@textrm R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-pro ject. org[]@textrm )[][]) and RForge Chapter 2 [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] Underfull \hbox (badness 10000) in paragraph at lines 7560--7567 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [87] Underfull \hbox (badness 10000) in paragraph at lines 7739--7745 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text[] @textrm part of [88] [89] [90] [91] Chapter 3 [92] [93] [94] [95] [96] [97] [98] Chapter 4 [99] [100] [101] [102] [103] [104] Underfull \hbox (badness 10000) in paragraph at lines 9024--9033 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9293--9305 @textrm See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual. htm l# controlling-code-generation[][][]@textrm , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9309--9310 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [108] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9447--9447 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [109] Underfull \hbox (badness 10000) in paragraph at lines 9480--9482 []@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [110] [111] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9626--9626 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [112] [113] [114] [115] Underfull \hbox (badness 10000) in paragraph at lines 9995--9997 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [116] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10052--10052 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10071--10071 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10082--10082 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10112--10112 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (30.03963pt too wide) in paragraph at lines 10959--10959 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11545--11545 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] Underfull \hbox (badness 10000) in paragraph at lines 12555--12559 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] Overfull \hbox (22.06111pt too wide) in paragraph at lines 13651--13651 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [157] Overfull \hbox (50.80455pt too wide) in paragraph at lines 13746--13746 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [158] Chapter 6 [159] [160] [161] [162] [163] [164] [165] Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 []@textrm Passing a variable-length string from C to For-tran is trick-ier, but Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 [][]@texttt https:// software. intel. com/ content/ www/ us/ en/ develo p/ documentation/ Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 @texttt fortran-compiler-oneapi-dev-guide-and-reference/ top/ compiler-refere nce/ Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 @texttt mixed-language-programming/ standard-tools-for-interoperability/ bind . html[][][] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] Warning: unbalanced parentheses in @def... [176] [177] [178] [179] [180] [181] Underfull \hbox (badness 10000) in paragraph at lines 15785--15791 []@textrm The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/Graphic sEngine.h[]@textrm , @texttt R_ Chapter 7 [182] [183] Chapter 8 [184] [185] [186] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16203--16203 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [187] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16261--16261 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [188] [189] [190] [191] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 16776--16783 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and [194] [195] Underfull \hbox (badness 10000) in paragraph at lines 16911--16915 []@textrm If the de-sired ar-chi-tec-ture is known, look in @texttt Software\R -core\R32[] @textrm or (Function and variable index) [196] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.vrs [197] [198] [199] [200]) (Concept index) [201] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.cps [202]) [203] ) (see the transcript file for additional information) Output written on R-exts.pdf (209 pages, 1032323 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-intro.texi @setfilename R-intro.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface) Cross reference values unknown; you must run TeX again. Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] [38] Chapter 9 [39] [40] Chapter 10 [41] [42] [43] [44] [45] [46] [47] [48] [49] Chapter 11 [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Chapter 12 [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] Chapter 13 [76] [77] Chapter 14 [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and Underfull \hbox (badness 7064) in paragraph at lines 6644--6649 @texttt \\?\UNC\server\dir1\dir2\file[]@textrm ) are not sup-ported, but they may work in [80] Appendix A [81] [82] [83] Appendix B [84] [85] [86] [87] [88] [89] [90] Appendix C [91] [92] Appendix D [93] No file R-intro.vrs. Appendix E [94] No file R-intro.cps. Appendix F [95] [96] ) (see the transcript file for additional information) Output written on R-intro.pdf (99 pages, 569621 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] [38] Chapter 9 [39] [40] Chapter 10 [41] [42] [43] [44] [45] [46] [47] [48] [49] Chapter 11 [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Chapter 12 [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] Chapter 13 [76] [77] Chapter 14 [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and Underfull \hbox (badness 7064) in paragraph at lines 6644--6649 @texttt \\?\UNC\server\dir1\dir2\file[]@textrm ) are not sup-ported, but they may work in [80] Appendix A [81] [82] [83] Appendix B [84] [85] [86] [87] [88] [89] [90] Appendix C [91] [92] Appendix D [93] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.vrs [94] [95]) Appendix E [96] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.cps [97]) Appendix F [98] [99] ) (see the transcript file for additional information) Output written on R-intro.pdf (105 pages, 626850 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] [38] Chapter 9 [39] [40] Chapter 10 [41] [42] [43] [44] [45] [46] [47] [48] [49] Chapter 11 [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Chapter 12 [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] Chapter 13 [76] [77] Chapter 14 [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and Underfull \hbox (badness 7064) in paragraph at lines 6644--6649 @texttt \\?\UNC\server\dir1\dir2\file[]@textrm ) are not sup-ported, but they may work in [80] Appendix A [81] [82] [83] Appendix B [84] [85] [86] [87] [88] [89] [90] Appendix C [91] [92] Appendix D [93] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.vrs [94] [95]) Appendix E [96] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.cps [97]) Appendix F [98] [99] ) (see the transcript file for additional information) Output written on R-intro.pdf (105 pages, 626846 bytes). Transcript written on R-intro.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-ints.texi @setfilename R-ints.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1501--1501 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1502--1502 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1503--1503 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1504--1504 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm ing been built and in-stalled as a Mac macOS `frame-work'. Specif-i-cal ly, Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, as Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm frame-works can con-tain mul-ti-ple ver-sions of R. It even-tu-ally re- solves to [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3955--3959 []@textrm If true, make use of the [][]@textbf codetools @textrm (@texttt http s:// CRAN. R-project. org/ [47] Underfull \hbox (badness 10000) in paragraph at lines 3989--3994 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] No file R-ints.vrs. (Concept index) [66] No file R-ints.cps. [67] ) (see the transcript file for additional information) Output written on R-ints.pdf (70 pages, 413073 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.toc [-1]) [-2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1501--1501 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1502--1502 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1503--1503 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1504--1504 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm ing been built and in-stalled as a Mac macOS `frame-work'. Specif-i-cal ly, Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, as Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm frame-works can con-tain mul-ti-ple ver-sions of R. It even-tu-ally re- solves to [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3955--3959 []@textrm If true, make use of the [][]@textbf codetools @textrm (@texttt http s:// CRAN. R-project. org/ [47] Underfull \hbox (badness 10000) in paragraph at lines 3989--3994 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.vrs [66]) (Concept index) [67] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.cps) [68] ) (see the transcript file for additional information) Output written on R-ints.pdf (72 pages, 464646 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.toc [-1]) [-2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1501--1501 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1502--1502 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1503--1503 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1504--1504 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm ing been built and in-stalled as a Mac macOS `frame-work'. Specif-i-cal ly, Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, as Underfull \hbox (badness 10000) in paragraph at lines 3768--3777 @textrm frame-works can con-tain mul-ti-ple ver-sions of R. It even-tu-ally re- solves to [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3955--3959 []@textrm If true, make use of the [][]@textbf codetools @textrm (@texttt http s:// CRAN. R-project. org/ [47] Underfull \hbox (badness 10000) in paragraph at lines 3989--3994 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.vrs [66]) (Concept index) [67] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-ints.cps) [68] ) (see the transcript file for additional information) Output written on R-ints.pdf (72 pages, 464627 bytes). Transcript written on R-ints.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-lang.texi @setfilename R-lang.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-lang.cp Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again. Overfull \hbox (8.41086pt too wide) in paragraph at lines 293--294 @textbf storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] [30] Chapter 6 [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 4353--4355 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] No file R-lang.vrs. (Concept Index) [52] No file R-lang.cps. Appendix A [53] [54] ) (see the transcript file for additional information) Output written on R-lang.pdf (57 pages, 326951 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 293--294 @textbf storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] [30] Chapter 6 [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 4353--4355 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.vrs [52]) (Concept Index) [53] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.cps) Appendix A [54] [55] ) (see the transcript file for additional information) Output written on R-lang.pdf (60 pages, 375642 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 293--294 @textbf storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] [30] Chapter 6 [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 4353--4355 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.vrs [52]) (Concept Index) [53] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-lang.cps) Appendix A [54] [55] ) (see the transcript file for additional information) Output written on R-lang.pdf (60 pages, 375634 bytes). Transcript written on R-lang.log. make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc' + cp doc/manual/R-exts.texi doc/manual/R-exts.texi.spot + cp doc/manual/R-intro.texi doc/manual/R-intro.texi.spot + sed -i 's|@eqn|@math|g' doc/manual/R-exts.texi + sed -i 's|@eqn|@math|g' doc/manual/R-intro.texi + make MAKEINFO=texi2any info make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/manual' /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-FAQ.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-admin.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-data.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-exts.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-intro.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-ints.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-lang.texi make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc' + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-intro.info.utf8 doc/manual/R-intro.info + mv doc/manual/R-intro.info.utf8 doc/manual/R-intro.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-FAQ.info.utf8 doc/manual/R-FAQ.info + mv doc/manual/R-FAQ.info.utf8 doc/manual/R-FAQ.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/FAQ.utf8 doc/FAQ + mv doc/FAQ.utf8 doc/FAQ + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-admin.info.utf8 doc/manual/R-admin.info + mv doc/manual/R-admin.info.utf8 doc/manual/R-admin.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-exts.info-1.utf8 doc/manual/R-exts.info-1 + mv doc/manual/R-exts.info-1.utf8 doc/manual/R-exts.info-1 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.yaBcuL + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64 ++ dirname /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64 + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.2.1 + make DESTDIR=/builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64 install install-info mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/m4' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/m4' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/tools' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/tools' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc' installing doc ... mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/doc/R mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/man/man1 make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/html' installing doc/html ... mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/doc/R/html make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/html' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/manual' installing doc/manual ... mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/doc/R/manual mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/doc/R/manual/images make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/etc' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/etc installing etc ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/etc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/share' installing share ... mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/R mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/dictionaries mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/encodings mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/java mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/licenses mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/make mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/Rd mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/Rd/macros mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/sh mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/texmf mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/texmf/bibtex/bib mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/texmf/bibtex/bst mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/texmf/tex/latex make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/share' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/src' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/scripts' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/bin mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/scripts' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/include' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/include/R make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/include/R_ext' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/include/R/R_ext make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/include/R_ext' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/include' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra/blas' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra/blas' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra/tre' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra/tre' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra/tzone' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra/tzone' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra/xdr' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra/xdr' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/extra/intl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra/intl' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/extra' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/appl' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/appl' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/nmath' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/nmath' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/unix' gcc -m64 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -DR_HOME='"/usr/lib64/R"' \ -o Rscript ./Rscript.c mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/pkgconfig make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/unix' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/main' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/exec make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/main' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/main' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/lib make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/main' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/main' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/internet' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/modules make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/internet' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/lapack' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/lapack' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/modules/X11' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules/X11' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/modules' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.1/src/library' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library installing packages ... building HTML index ... make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/src' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/tests' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/tests' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/manual' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/info /usr/bin/install -c -m 644 "./dir" "/builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/info" installing R info pages ... updating '/usr/share/info/dir' ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.1/doc/manual' + mv doc/manual/R-exts.texi.spot doc/manual/R-exts.texi + mv doc/manual/R-intro.texi.spot doc/manual/R-intro.texi + make DESTDIR=/builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64 install-pdf make[1]: Entering directory '/builddir/build/BUILD/R-4.2.1/doc/manual' TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-exts.texi @setfilename R-exts.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 500--503 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1538--1538 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1539--1539 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [18] Underfull \hbox (badness 10000) in paragraph at lines 1638--1648 @texttt sourceforge. net/ projects/ tktable/ files/ tktable/ 2. 10/ Tkt able2. 10. tar. gz[][][]@textrm , but [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2602--2602 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2604--2604 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [30] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2845--2848 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Overfull \hbox (39.30717pt too wide) in paragraph at lines 2917--2917 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2940--2946 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Underfull \hbox (badness 10000) in paragraph at lines 3019--3023 @textrm ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manual/ c make-env-variables. 7. html# [35] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3120--3120 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4744--4744 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4763--4763 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [54] [55] [56] [57] [58] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5205--5205 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5207--5207 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5208--5208 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5223--5223 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [59] Underfull \hbox (badness 7558) in paragraph at lines 5283--5287 @texttt /Applications/CMake.app/Contents/bin/cmake[] @textrm and that should b e looked for [60] [61] [62] [63] [64] Underfull \hbox (badness 10000) in paragraph at lines 5734--5737 @texttt gcc/ C-Extensions. html[][][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [65] [66] [67] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5958--5958 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [68] Underfull \hbox (badness 10000) in paragraph at lines 6057--6058 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [69] [70] [71] [72] [73] Underfull \hbox (badness 10000) in paragraph at lines 6508--6518 []@textrm R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-pro ject. org[]@textrm )[][]) and RForge Chapter 2 [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] Underfull \hbox (badness 10000) in paragraph at lines 7560--7567 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [87] Underfull \hbox (badness 10000) in paragraph at lines 7739--7745 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text[] @textrm part of [88] [89] [90] [91] Chapter 3 [92] [93] [94] [95] [96] [97] [98] Chapter 4 [99] [100] [101] [102] [103] [104] Underfull \hbox (badness 10000) in paragraph at lines 9024--9033 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9293--9305 @textrm See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual. htm l# controlling-code-generation[][][]@textrm , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9309--9310 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [108] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9447--9447 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [109] Underfull \hbox (badness 10000) in paragraph at lines 9480--9482 []@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [110] [111] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9626--9626 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [112] [113] [114] [115] Underfull \hbox (badness 10000) in paragraph at lines 9995--9997 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [116] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10052--10052 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10071--10071 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10082--10082 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10112--10112 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (30.03963pt too wide) in paragraph at lines 10959--10959 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11545--11545 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] Underfull \hbox (badness 10000) in paragraph at lines 12555--12559 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] Overfull \hbox (22.06111pt too wide) in paragraph at lines 13651--13651 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [157] Overfull \hbox (50.80455pt too wide) in paragraph at lines 13746--13746 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [158] Chapter 6 [159] [160] [161] [162] [163] [164] [165] Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 []@textrm Passing a variable-length string from C to For-tran is trick-ier, but Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 [][]@texttt https:// software. intel. com/ content/ www/ us/ en/ develo p/ documentation/ Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 @texttt fortran-compiler-oneapi-dev-guide-and-reference/ top/ compiler-refere nce/ Underfull \hbox (badness 10000) in paragraph at lines 14493--14498 @texttt mixed-language-programming/ standard-tools-for-interoperability/ bind . html[][][] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] Warning: unbalanced parentheses in @def... [176] [177] [178] [179] [180] [181] Underfull \hbox (badness 10000) in paragraph at lines 15785--15791 []@textrm The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/Graphic sEngine.h[]@textrm , @texttt R_ Chapter 7 [182] [183] Chapter 8 [184] [185] [186] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16203--16203 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [187] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16261--16261 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [188] [189] [190] [191] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 16776--16783 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and [194] [195] Underfull \hbox (badness 10000) in paragraph at lines 16911--16915 []@textrm If the de-sired ar-chi-tec-ture is known, look in @texttt Software\R -core\R32[] @textrm or (Function and variable index) [196] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.vrs [197] [198] [199] [200]) (Concept index) [201] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-exts.cps [202]) [203] ) (see the transcript file for additional information) Output written on R-exts.pdf (209 pages, 1032323 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-intro.texi @setfilename R-intro.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2021-04-25.21]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.2.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] [38] Chapter 9 [39] [40] Chapter 10 [41] [42] [43] [44] [45] [46] [47] [48] [49] Chapter 11 [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Chapter 12 [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] Chapter 13 [76] [77] Chapter 14 [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and Underfull \hbox (badness 7064) in paragraph at lines 6644--6649 @texttt \\?\UNC\server\dir1\dir2\file[]@textrm ) are not sup-ported, but they may work in [80] Appendix A [81] [82] [83] Appendix B [84] [85] [86] [87] [88] [89] [90] Appendix C [91] [92] Appendix D [93] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.vrs [94] [95]) Appendix E [96] (/builddir/build/BUILD/R-4.2.1/doc/manual/R-intro.cps [97]) Appendix F [98] [99] ) (see the transcript file for additional information) Output written on R-intro.pdf (105 pages, 626846 bytes). 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/KernSmooth/html/locpoly.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Aids2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Animals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Boston.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Cars93.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Cushings.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/DDT.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/GAGurine.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Insurance.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/MASS-internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Melanoma.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Null.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/OME.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Pima.tr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Rabbit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Rubber.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/SP500.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Sitka.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Sitka89.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Skye.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/Traffic.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/UScereal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/UScrime.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/VA.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/abbey.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/accdeaths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/addterm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/anorexia.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/anova.negbin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/area.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/bacteria.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/bandwidth.nrd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/bcv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/beav1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/beav2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/biopsy.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/birthwt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/boxcox.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/cabbages.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/caith.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/cats.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/cement.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/chem.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/con2tr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/confint.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/contr.sdif.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/coop.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/corresp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/cov.rob.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/cov.trob.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/cpus.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/crabs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/deaths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/denumerate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/dose.p.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/drivers.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/dropterm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/eagles.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/epil.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/eqscplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/farms.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/fgl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/fitdistr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/forbes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/fractions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/galaxies.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/gamma.dispersion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/gamma.shape.glm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/gehan.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/genotype.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/geyser.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/gilgais.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/ginv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/glm.convert.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/glm.nb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/glmmPQL.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/hills.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/hist.scott.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/housing.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/huber.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/hubers.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/immer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/isoMDS.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/kde2d.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/lda.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/ldahist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/leuk.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/lm.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/lm.ridge.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/loglm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/loglm1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/logtrans.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/lqs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/mammals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/mca.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/mcycle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/menarche.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/michelson.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/minn38.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/motors.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/muscle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/mvrnorm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/negative.binomial.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/newcomb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/nlschools.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/npk.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/npr1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/oats.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/painters.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/pairs.lda.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/parcoord.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/petrol.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/phones.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/plot.lda.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/plot.mca.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/plot.profile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/polr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/predict.glmmPQL.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/predict.lda.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/predict.lqs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/predict.mca.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/predict.qda.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/profile.glm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/qda.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/quine.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/rational.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/renumerate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/rlm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/rms.curv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/rnegbin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/road.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/rotifer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/sammon.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/ships.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/shoes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/shrimp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/shuttle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/snails.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/stdres.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/steam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/stepAIC.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/stormer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/html/studres.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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$RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/MatrixFactorization-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/RsparseMatrix-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/Schur-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/Schur.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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$RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/condest.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/dMatrix-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/ddenseMatrix-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/ddiMatrix-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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$RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/symmpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/triangularMatrix-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/uniqTsparse.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/html/unpack.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/AsIs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Bessel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/CallExternal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Colon.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Comparison.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Constants.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Control.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Cstack_info.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/DateTimeClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Extract.data.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Extract.factor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Extract.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Extremes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Foreign-internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Foreign.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Hyperbolic.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ISOdatetime.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Logic.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/LongVectors.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/MathFun.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Memory-limits.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Memory.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/NA.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/NULL.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/NumericConstants.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Ops.Date.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Paren.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Platform.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Primitive.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Quotes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Random-user.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Random.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/RdUtils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Recall.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Reserved.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Rhome.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Round.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/S3method.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Signals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Special.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/StackOverflows.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Startup.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Syntax.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.getenv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.getpid.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.glob.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.info.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.localeconv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.readlink.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.setFileTime.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.setenv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.sleep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.time.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Sys.which.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Trig.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/UTF8filepaths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/UseMethod.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Vectorize.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/Version.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/abbreviate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/agrep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/all.equal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/all.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/allnames.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/any.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/aperm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/append.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/apply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/args.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/array.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/as.Date.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/as.POSIXlt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/as.data.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/as.environment.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/as.function.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/asplit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/assign.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/assignOps.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/attach.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/attr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/attributes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/autoload.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/backsolve.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/base-defunct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/base-deprecated.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/base-internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/base-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/basename.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/bincode.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/bindenv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/bitwise.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/body.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/bquote.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/browser.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/browserText.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/builtins.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/by.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/c.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/call.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/callCC.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/capabilities.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/cat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/cbind.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/char.expand.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/character.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/charmatch.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/chartr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/chkDots.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/chol.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/chol2inv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/col.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/colSums.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/colnames.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/commandArgs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/comment.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/complex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/conditions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/conflicts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/connections.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/contributors.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/copyright.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/crossprod.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/cumsum.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/curlGetHeaders.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/cut.POSIXt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/cut.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/data.class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/data.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/data.matrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dataframeHelpers.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/date.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dcf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/debug.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/delayedAssign.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/deparse.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/deparseOpts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/det.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/detach.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dev.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/diag.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/diff.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/difftime.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dim.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dimnames.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/do.call.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dontCheck.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dots.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/double.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dput.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/drop.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/droplevels.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dump.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/duplicated.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/dynload.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/eapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/eigen.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/encodeString.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/environment.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/eval.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/exists.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/expand.grid.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/expression.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/extSoftVersion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/factor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/file.access.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/file.choose.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/file.info.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/file.path.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/file.show.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/files.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/files2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/find.package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/findInterval.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/force.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/forceAndCall.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/formals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/format.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/format.info.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/format.pval.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/formatDL.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/formatc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/function.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/funprog.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/gc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/gc.time.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/gctorture.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/get.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/getCallingDLL.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/getDLLRegisteredRoutines.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/getLoadedDLLs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/getNativeSymbolInfo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/gettext.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/getwd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/gl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/grep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/grepRaw.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/groupGeneric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/grouping.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/gzcon.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/hexmode.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/iconv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/icuSetCollate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/identical.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/identity.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ifelse.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/integer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/interaction.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/interactive.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/invisible.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/is.finite.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/is.function.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/is.language.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/is.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/is.recursive.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/is.single.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/is.unsorted.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/isR.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/isS4.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/isSymmetric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/jitter.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/kappa.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/kronecker.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/l10n_info.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/labels.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/lapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/lazyload.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/length.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/lengths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/levels.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/libPaths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/libcurlVersion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/library.dynam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/library.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/license.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/list.files.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/list.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/list2DF.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/list2env.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/load.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/locales.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/logical.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/lower.tri.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/make.names.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/make.unique.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/mapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/marginSums.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/mat.or.vec.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/match.arg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/match.call.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/match.fun.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/match.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/matmult.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/matrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/maxCol.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/mean.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/memCompress.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/memlimits.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/memory.profile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/merge.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/message.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/missing.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/mode.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/mtfrm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/name.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/names.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/nargs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/nchar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/nlevels.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/noquote.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/norm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/normalizePath.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/notyet.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/nrow.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ns-dblcolon.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ns-hooks.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ns-internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ns-load.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ns-reflect.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/ns-topenv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/numeric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/numeric_version.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/octmode.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/on.exit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/options.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/order.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/outer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/parse.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/paste.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/path.expand.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/pcre_config.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/pipeOp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/plot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/pmatch.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/polyroot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/pos.to.env.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/pretty.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/print.dataframe.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/print.default.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/print.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/prmatrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/proc.time.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/prod.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/proportions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/pushBack.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/qr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/qraux.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/quit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/range.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rank.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/raw.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rawConnection.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rawConversion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/readBin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/readChar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/readLines.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/readRDS.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/readRenviron.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/readline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/reg.finalizer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/regex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/regmatches.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/replace.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rev.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/round.POSIXt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/row.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/row.names.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/rowsum.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sQuote.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sample.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/save.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/scale.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/scan.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/search.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/seek.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/seq.Date.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/seq.POSIXt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/seq.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sequence.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/serialize.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/setTimeLimit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sets.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/shQuote.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/showConnections.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sign.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sink.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/slice.index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/slotOp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/socketSelect.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/solve.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sort.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/source.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/split.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sprintf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/srcfile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/standardGeneric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/startsWith.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/stop.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/stopifnot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/strptime.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/strrep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/strsplit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/strtoi.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/strtrim.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/structure.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/strwrap.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/subset.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/substitute.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/substr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sum.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/summary.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/svd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sweep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/switch.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sys.parent.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/sys.source.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/system.file.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/system.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/system.time.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/system2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/t.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/table.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/tabulate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/tapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/taskCallback.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/taskCallbackManager.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/taskCallbackNames.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/tempfile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/textconnections.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/tilde.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/timezones.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/toString.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/trace.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/traceback.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/tracemem.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/transform.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/trimws.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/try.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/typeof.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/unique.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/unlink.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/unlist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/unname.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/userhooks.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/utf8Conversion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/validUTF8.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/vector.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/warning.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/warnings.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/weekday.POSIXt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/which.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/which.min.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/with.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/withVisible.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/write.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/writeLines.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/xtfrm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/zMachine.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/zScript.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/zapsmall.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/zpackages.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/base/html/zutils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/EEF.profile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/Imp.Estimates.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/abc.ci.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/acme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/aids.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/aircondit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/amis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/aml.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/beaver.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/bigcity.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/boot-practicals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/boot.array.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/boot.ci.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/boot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/brambles.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/breslow.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/calcium.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/cane.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/capability.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/catsM.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/cav.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/cd4.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/cd4.nested.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/censboot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/channing.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/claridge.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/cloth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/co.transfer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/coal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/control.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/corr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/cum3.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/cv.glm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/darwin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/dogs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/downs.bc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/ducks.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/empinf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/envelope.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/exp.tilt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/fir.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/freq.array.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/frets.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/glm.diag.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/glm.diag.plots.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/gravity.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/hirose.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/imp.weights.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/inv.logit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/islay.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/jack.after.boot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/k3.linear.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/linear.approx.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/lines.saddle.distn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/logit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/manaus.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/melanoma.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/motor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/neuro.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/nitrofen.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/nodal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/norm.ci.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/nuclear.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/paulsen.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/plot.boot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/poisons.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/polar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/print.boot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/print.bootci.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/print.saddle.distn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/print.simplex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/remission.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/saddle.distn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/saddle.distn.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/saddle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/salinity.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/simplex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/simplex.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/smooth.f.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/sunspot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/survival.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/tau.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/tilt.boot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/tsboot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/tuna.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/urine.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/var.linear.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/boot/html/wool.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/SOM.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/batchSOM.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/condense.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/knn.cv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/knn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/knn1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/lvq1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/lvq2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/lvq3.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/lvqinit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/lvqtest.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/multiedit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/olvq1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/reduce.nn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/html/somgrid.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/agnes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/agnes.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/agriculture.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/animals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/bannerplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/chorSub.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/clara.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/clara.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/clusGap.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/clusplot.default.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/clusplot.partition.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/cluster-internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/coef.hclust.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/daisy.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/diana.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/dissimilarity.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/ellipsoidhull.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/fanny.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/fanny.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/flower.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/lower.to.upper.tri.inds.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/mona.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/mona.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/pam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/pam.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/partition.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/plantTraits.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/plot.agnes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/plot.diana.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/plot.mona.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/plot.partition.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/pltree.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/pluton.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/predict.ellipsoid.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/print.agnes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/print.clara.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/print.diana.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/print.dissimilarity.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/print.fanny.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/print.mona.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/print.pam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/ruspini.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/silhouette.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/sizeDiss.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/summary.agnes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/summary.clara.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/summary.diana.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/summary.mona.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/summary.pam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/twins.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/volume.ellipsoid.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/votes.repub.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/html/xclara.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/codetools/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/codetools/html/checkUsage.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/codetools/html/codetools.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/codetools/html/findGlobals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/codetools/html/showTree.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/compiler/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/compiler/html/compile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/AirPassengers.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/BJsales.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/BOD.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/ChickWeight.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/DNase.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/EuStockMarkets.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Formaldehyde.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/HairEyeColor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Harman23.cor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Harman74.cor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Indometh.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/InsectSprays.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/JohnsonJohnson.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/LakeHuron.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/LifeCycleSavings.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Loblolly.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Nile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Orange.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/OrchardSprays.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/PlantGrowth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Puromycin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Theoph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/Titanic.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/ToothGrowth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/UCBAdmissions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/UKDriverDeaths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/UKLungDeaths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/UKgas.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/USAccDeaths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/USArrests.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/USJudgeRatings.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/USPersonalExpenditure.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/VADeaths.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/WWWusage.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/WorldPhones.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/ability.cov.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/airmiles.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/airquality.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/anscombe.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/attenu.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/attitude.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/austres.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/beavers.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/cars.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/chickwts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/co2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/crimtab.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/datasets-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/discoveries.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/esoph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/euro.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/eurodist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/faithful.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/freeny.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/infert.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/iris.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/islands.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/lh.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/longley.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/lynx.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/morley.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/mtcars.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/nhtemp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/nottem.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/npk.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/occupationalStatus.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/precip.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/presidents.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/pressure.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/quakes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/randu.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/rivers.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/rock.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/sleep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/stackloss.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/state.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/sunspot.month.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/sunspot.year.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/sunspots.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/swiss.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/treering.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/trees.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/uspop.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/volcano.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/warpbreaks.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/women.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/datasets/html/zCO2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/lookup.xport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.S.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.arff.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.dbf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.dta.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.epiinfo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.mtp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.octave.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.spss.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.ssd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.systat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/read.xport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/write.arff.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/write.dbf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/write.dta.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/html/write.foreign.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/Devices.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/Hershey.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/Japanese.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/Type1Font.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/adjustcolor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/as.graphicsAnnot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/as.raster.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/axisTicks.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/boxplot.stats.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/bringToTop.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/cairo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/cairoSymbolFont.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/check.options.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/chull.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/cm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/col2rgb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/colorRamp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/colors.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/contourLines.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/convertColor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/densCols.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/dev.capabilities.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/dev.capture.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/dev.flush.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/dev.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/dev.interactive.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/dev.size.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/dev2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/dev2bitmap.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/devAskNewPage.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/embedFonts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/extendrange.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/getGraphicsEvent.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/grDevices-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/grSoftVersion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/gray.colors.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/gray.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/hcl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/hsv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/make.rgb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/msgWindow.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/n2mfrow.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/nclass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/palette.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/palettes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/pdf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/pdf.options.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/pictex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/plotmath.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/png.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/postscript.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/postscriptFonts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/pretty.Date.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/ps.options.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/quartz.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/quartzFonts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/recordGraphics.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/recordplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/rgb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/rgb2hsv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/savePlot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/trans3d.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/windows.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/windows.options.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/windowsFonts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/x11.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/x11Fonts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/xfig.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/xy.coords.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/xyTable.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/html/xyz.coords.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/abline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/arrows.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/assocplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/axTicks.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/axis.POSIXct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/axis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/barplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/box.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/boxplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/boxplot.matrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/bxp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/cdplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/clip.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/contour.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/convertXY.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/coplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/curve.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/dotchart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/filled.contour.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/fourfoldplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/graphics-defunct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/graphics-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/grid.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/hist.POSIXt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/hist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/identify.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/image.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/layout.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/legend.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/lines.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/locator.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/matplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/mosaicplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/mtext.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/pairs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/panel.smooth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/par.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/persp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/pie.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.dataframe.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.default.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.design.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.factor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.formula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.raster.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.table.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.window.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plot.xy.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/plothistogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/points.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/polygon.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/polypath.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/rasterImage.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/rect.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/rug.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/screen.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/segments.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/smoothScatter.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/spineplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/stars.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/stem.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/stripchart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/strwidth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/sunflowerplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/symbols.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/text.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/title.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/units.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/xspline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/html/zAxis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/Grid.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/absolute.size.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/arrow.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/as.mask.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/calcStringMetric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/current.viewport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/dataViewport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/depth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/deviceLoc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/drawDetails.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/editDetails.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/editViewport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/explode.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/gEdit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/gPath.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/getNames.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/gpar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid-defunct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid-internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.DLapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.add.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.bezier.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.cap.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.circle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.clip.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.convert.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.copy.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.curve.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.delay.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.display.list.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.draw.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.edit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.force.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.function.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.get.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.grab.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.grep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.grill.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.grob.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.group.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.layout.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.lines.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.locator.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.ls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.move.to.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.newpage.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.null.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.pack.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.path.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.place.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.plot.and.legend.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.points.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.polygon.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.pretty.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.raster.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.record.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.rect.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.refresh.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.remove.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.reorder.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.roundrect.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.segments.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.set.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.show.layout.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.show.viewport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.stroke.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.text.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.xaxis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.xspline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grid.yaxis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/gridCoords.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grobCoords.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grobName.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grobWidth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/grobX.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/legendGrob.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/makeContent.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/patterns.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/plotViewport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/resolveRasterSize.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/showGrob.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/showViewport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/stringWidth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/unit.c.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/unit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/unit.length.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/unit.pmin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/unit.rep.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/unitType.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/valid.just.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/validDetails.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/viewport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/viewportTransform.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/viewports.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/vpPath.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/widthDetails.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/xDetails.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/html/xsplinePoints.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/Lattice.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/Rows.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/USMortality.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/axis.default.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/banking.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/barchart.table.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/barley.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/cloud.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/draw.colorkey.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/draw.key.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/environmental.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/ethanol.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/histogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/interaction.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/lattice.options.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/latticeParseFormula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/level.colors.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/levelplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/llines.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/lset.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/make.groups.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/melanoma.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/oneway.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/packet.panel.default.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.axis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.barchart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.bwplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.cloud.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.densityplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.dotplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.functions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.histogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.levelplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.loess.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.number.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.pairs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.parallel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.qqmath.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.qqmathline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.smoothScatter.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.spline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.stripplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.superpose.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.violin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/panel.xyplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/prepanel.default.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/prepanel.functions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/print.trellis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/qq.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/qqmath.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/rfs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/shingles.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/simpleKey.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/simpleTheme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/singer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/splom.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/strip.default.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/tmd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/trellis.device.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/trellis.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/trellis.par.get.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/update.trellis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/utilities.3d.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/xyplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/html/xyplot.ts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/BasicClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/Classes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/Classes_Details.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/Documentation.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/EmptyMethodsList-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/EnvironmentClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/GenericFunctions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/Introduction.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/LanguageClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/LinearMethodsList-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/MethodDefinition-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/MethodSupport.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/MethodWithNext-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/Methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/MethodsList-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/MethodsList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/Methods_Details.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/Methods_for_Nongenerics.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/Methods_for_S3.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/NextMethod.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/ObjectsWithPackage-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/RClassUtils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/RMethodUtils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/S3Part.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/S4groupGeneric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/SClassExtension-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/StructureClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/TraceClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/as.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/callGeneric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/canCoerce.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/cbind2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/className.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/classRepresentation-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/classesToAM.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/dotsMethods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/evalSource.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/findClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/findMethods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/fixPrevious.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/genericFunction-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/getClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/getMethod.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/getPackageName.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/hasArg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/implicitGeneric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/inheritedSlotNames.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/initialize-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/is.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/isSealedMethod.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/languageEl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/localRefClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/method.skeleton.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/methodUtilities.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/methods-defunct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/methods-deprecated.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/methods-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/new.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/nonStructure-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/promptClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/promptMethods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/refClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/removeMethod.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/representation.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/selectSuperClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setAs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setClassUnion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setGeneric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setGroupGeneric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setIs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setLoadActions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setMethod.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setOldClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/setSClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/show.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/showMethods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/signature-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/slot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/stdRefClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/substituteDirect.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/testInheritedMethods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/validObject.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/html/zBasicFunsList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Beta.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/FFdes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Predict.matrix.cr.smooth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Predict.matrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Predict.matrix.soap.film.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Rrank.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Sl.initial.repara.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Sl.repara.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Sl.setup.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/Tweedie.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/XWXd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/anova.gam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/bam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/bam.update.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/bandchol.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/blas.thread.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/bug.reports.mgcv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/cSplineDes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/chol.down.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/choose.k.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/columb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 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$RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/extract.lme.cov.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/family.mgcv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/fix.family.link.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/fixDependence.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/formXtViX.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/formula.gam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/fs.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/full.score.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.check.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 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$RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.mh.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.models.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.outer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.reparam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.scale.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.selection.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.side.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gam.vcomp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 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$RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gamm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gammals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gaulss.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/get.var.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gevlss.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/ginla.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/gumbls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/identifiability.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/in.out.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/inSide.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/influence.gam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/initial.sp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/interpret.gam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/jagam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 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$RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/ls.size.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/magic.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/magic.post.proc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/mgcv-FAQ.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/mgcv-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/mgcv-parallel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/mini.roots.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/missing.data.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/model.matrix.gam.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/mono.con.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/mroot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/multinom.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/mvn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/negbin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/new.name.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/notExp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/notExp2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/null.space.dimension.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/html/ocat.html + for i in 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i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/ACF.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/ACF.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/ACF.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Alfalfa.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Assay.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/BodyWeight.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Cefamandole.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Coef.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Covariate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Covariate.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Dialyzer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Dim.corSpatial.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Dim.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Dim.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Dim.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Earthquake.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Extract.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Fatigue.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Gasoline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Glucose.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Glucose2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Gun.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/IGF.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Initialize.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Initialize.glsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Initialize.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Initialize.lmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Initialize.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Initialize.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/LDEsysMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Machines.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/MathAchSchool.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/MathAchieve.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Matrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Matrix.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Matrix.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Meat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Milk.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Muscle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Names.formula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Names.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Names.pdBlocked.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Names.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Names.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Nitrendipene.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Oats.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Orthodont.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Ovary.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Oxboys.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Oxide.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/PBG.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Phenobarb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Pixel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Quinidine.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Rail.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/RatPupWeight.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Relaxin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Remifentanil.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Soybean.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Spruce.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Tetracycline1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Tetracycline2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/VarCorr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.corExp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.corGaus.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.corLin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.corRatio.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.corSpatial.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.corSpher.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.default.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Variogram.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Wafer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Wheat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/Wheat2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/allCoef.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/anova.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/anova.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/as.matrix.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/as.matrix.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/as.matrix.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/asOneFormula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/asTable.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/augPred.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/balancedGrouped.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/bdf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/coef.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/coef.gnls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/coef.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/coef.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/coef.modelStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/coef.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/coef.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/coef.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/collapse.groupedData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/collapse.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/compareFits.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/comparePred.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corAR1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corARMA.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corCAR1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corCompSymm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corExp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corFactor.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corFactor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corGaus.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corLin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corMatrix.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corMatrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corMatrix.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corMatrix.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corNatural.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corRatio.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corSpatial.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corSpher.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/corSymm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/ergoStool.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fdHess.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fitted.glsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fitted.gnlsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fitted.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fitted.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fitted.lmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fitted.nlmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fixed.effects.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/fixef.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/formula.pdBlocked.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/formula.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/formula.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/gapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getCovariate.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getCovariate.data.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getCovariate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getCovariate.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getCovariateFormula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getData.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getData.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getData.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getGroups.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getGroups.data.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getGroups.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getGroups.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getGroups.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getGroups.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getGroups.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getGroupsFormula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getResponse.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getResponseFormula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/getVarCov.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/gls-internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/glsControl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/glsObject.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/glsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/gnls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/gnlsControl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/gnlsObject.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/gnlsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/groupedData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/gsummary.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/intervals.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/intervals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/intervals.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/intervals.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/isBalanced.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/isInitialized.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/lmList.groupedData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/lme.groupedData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/lme.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/lmeControl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/lmeObject.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/lmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logDet.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logDet.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logDet.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logDet.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.glsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.gnls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.gnlsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.lmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/logLik.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/model.matrix.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/needUpdate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/needUpdate.modelStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/nlme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/nlme.nlsList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/nlmeControl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/nlmeObject.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/nlmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/nlsList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/nlsList.selfStart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pairs.compareFits.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pairs.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pairs.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdBlocked.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdCompSymm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdConstruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdConstruct.pdBlocked.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdDiag.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdFactor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdFactor.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdIdent.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdLogChol.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdMatrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdMatrix.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdNatural.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pdSymm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/phenoModel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.ACF.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.Variogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.augPred.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.compareFits.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.intervals.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.nffGroupedData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.nfnGroupedData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.nmGroupedData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.ranef.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/plot.ranef.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/pooledSD.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/predict.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/predict.gnls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/predict.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/predict.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/predict.nlme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/print.summary.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/print.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/qqnorm.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/qqnorm.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/quinModel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/random.effects.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/ranef.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/ranef.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/recalc.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/recalc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/recalc.modelStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/recalc.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/recalc.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/residuals.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/residuals.glsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/residuals.gnlsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/residuals.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/residuals.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/residuals.lmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/residuals.nlmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/simulate.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/solve.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/solve.reStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/splitFormula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/summary.corStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/summary.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/summary.lmList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/summary.lme.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/summary.modelStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/summary.nlsList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/summary.pdMat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/summary.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/update.modelStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/update.varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varComb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varConstPower.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varConstProp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varExp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varFixed.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varFunc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varIdent.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varPower.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varWeights.glsStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varWeights.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/html/varWeights.lmeStruct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nnet/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nnet/html/class.ind.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nnet/html/multinom.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nnet/html/nnet.Hess.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nnet/html/nnet.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nnet/html/predict.nnet.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nnet/html/which.is.max.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/RngStream.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/children.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/clusterApply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/detectCores.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/makeCluster.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/mcaffinity.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/mcfork.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/mclapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/mcparallel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/parallel-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/pvec.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/html/splitIndices.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/car.test.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/car90.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/cu.summary.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/kyphosis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/labels.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/meanvar.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/na.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/path.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/plot.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/plotcp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/post.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/predict.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/print.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/printcp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/prune.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/residuals.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/rpart-internal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/rpart.control.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/rpart.exp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/rpart.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/rsq.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/snip.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/solder.balance.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/stagec.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/summary.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/text.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/html/xpred.rpart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/Kaver.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/Kenvl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/Kfn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/Psim.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/SSI.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/Strauss.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/anova.trls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/correlogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/expcov.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/ppgetregion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/ppinit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/pplik.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/ppregion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/predict.trls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/prmat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/semat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/surf.gls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/surf.ls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/trls.influence.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/trmat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/html/variogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/asVector.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/backSpline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/bs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/interpSpline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/ns.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/periodicSpline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/polySpline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/predict.bSpline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/predict.bs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/splineDesign.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/splineKnots.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/splineOrder.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/splines-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/html/xyVector.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/AIC.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ARMAacf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ARMAtoMA.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Beta.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Binomial.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Cauchy.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Chisquare.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Distributions.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Exponential.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Fdist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/GammaDist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Geometric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/HoltWinters.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Hypergeometric.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/IQR.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/KalmanLike.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Logistic.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Lognormal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Multinom.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/NLSstAsymptotic.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/NLSstClosestX.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/NLSstLfAsymptote.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/NLSstRtAsymptote.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/NegBinomial.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Normal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Pair.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Poisson.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSD.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSasymp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSasympOff.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSasympOrig.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSbiexp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSfol.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSfpl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSgompertz.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSlogis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSmicmen.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SSweibull.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/SignRank.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Smirnov.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/StructTS.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/TDist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Tukey.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/TukeyHSD.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Uniform.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Weibull.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/Wilcoxon.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/acf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/acf2AR.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/add1.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/addmargins.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/aggregate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/alias.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/anova.glm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/anova.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/anova.lm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/anova.mlm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ansari.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/aov.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/approxfun.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ar.ols.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/arima.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/arima.sim.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/arima0.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/as.hclust.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/asOneSidedFormula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ave.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/bandwidth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/bartlett.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/binom.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/biplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/biplot.princomp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/birthday.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/box.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/cancor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/case.names.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/checkMFClasses.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/chisq.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/cmdscale.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/coef.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/complete.cases.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/confint.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/constrOptim.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/contrast.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/contrasts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/convolve.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/cophenetic.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/cor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/cor.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/cov.wt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/cpgram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/cutree.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/decompose.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/delete.response.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/dendrapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/dendrogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/density.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/deriv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/deviance.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/df.residual.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/diffinv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/dist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/dummy.coef.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ecdf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/eff.aovlist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/effects.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/embed.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/expand.model.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/extractAIC.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/factanal.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/factor.scope.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/family.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/fft.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/filter.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/fisher.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/fitted.values.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/fivenum.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/fligner.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/formula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/formula.nls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/friedman.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ftable.formula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ftable.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/getInitial.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/glm.control.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/glm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/glm.summaries.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/hclust.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/heatmap.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/identify.hclust.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/influence.measures.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/integrate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/interaction.plot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/is.empty.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/isoreg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/kernapply.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/kernel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/kmeans.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/kruskal.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ks.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ksmooth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/lag.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/lag.plot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/line.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/listof.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/lm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/lm.influence.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/lm.summaries.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/lmfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/loadings.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/loess.control.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/loess.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/logLik.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/loglin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/lowess.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ls.diag.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ls.print.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/lsfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/mad.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/mahalanobis.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/make.link.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/makepredictcall.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/manova.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/mantelhaen.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/mauchly.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/mcnemar.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/median.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/medpolish.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/model.extract.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/model.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/model.matrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/model.tables.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/monthplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/mood.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/na.action.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/na.contiguous.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/na.fail.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/nafns.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/naprint.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/nextn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/nlm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/nlminb.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/nls.control.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/nls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/nobs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/numericDeriv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/offset.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/oneway.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/optim.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/optimize.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/order.dendrogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/p.adjust.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/pairwise.prop.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/pairwise.t.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/pairwise.table.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/pairwise.wilcox.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.HoltWinters.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.acf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.density.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.isoreg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.lm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.ppr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.profile.nls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.spec.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.stepfun.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/plot.ts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/poisson.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/poly.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/power.anova.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/power.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/power.prop.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/power.t.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/pp.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ppoints.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ppr.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/prcomp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/predict.HoltWinters.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/predict.arima.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/predict.glm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/predict.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/predict.lm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/predict.loess.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/predict.nls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/predict.smooth.spline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/preplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/princomp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/print.power.htest.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/print.ts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/printCoefmat.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/profile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/profile.nls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/proj.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/prop.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/prop.trend.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/qqnorm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/quade.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/quantile.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/r2dtable.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/rWishart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/read.ftable.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/rect.hclust.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/relevel.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/reorder.dendrogram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/reorder.factor.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/replications.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/reshape.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/residuals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/runmed.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/scatter.smooth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/screeplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/sd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/se.contrast.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/selfStart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/setNames.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/shapiro.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/sigma.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/simulate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/smooth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/smooth.spline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/smoothEnds.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/sortedXyData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/spec.ar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/spec.pgram.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/spec.taper.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/spectrum.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/splinefun.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/start.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/stat.anova.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/stats-defunct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/stats-deprecated.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/stats-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/summary.glm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/summary.lm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/summary.manova.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/summary.nls.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/summary.princomp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/supsmu.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/symnum.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/t.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/termplot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/terms.formula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/terms.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/terms.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/time.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/toeplitz.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ts-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ts.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ts.plot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/ts.union.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/tsSmooth.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/tsdiag.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/tsp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/uniroot.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/update.formula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/weighted.residuals.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/weights.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/wilcox.test.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/window.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/xtabs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/html/zC.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/coef-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/confint-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/logLik-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/mle-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/mle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/plot-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/profile-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/profile.mle-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/show-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/stats4-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/summary-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/summary.mle-class.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/update-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats4/html/vcov-methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/Surv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/aggregate.survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/agreg.fit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/aml.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/anova.coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/attrassign.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/basehaz.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/bladder.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/blogit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/cch.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/colon.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/concordance.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/concordancefit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/cox.zph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/coxph.control.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/coxph.detail.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/coxph.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/coxph.wtest.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/frailty.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/gbsg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/heart.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/is.ratetable.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/kidney.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/levels.Surv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/lines.survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/logLik.coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/logan.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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-i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/myeloid.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/myeloma.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/nafld.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/neardate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/nsk.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/nwtco.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/ovarian.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/pbc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/pbcseq.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/plot.aareg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/plot.cox.zph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/plot.survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/predict.coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/predict.survreg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/print.aareg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/print.summary.coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/print.summary.survexp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/print.summary.survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/print.survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/pseudo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/pspline.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/pyears.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/quantile.survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/ratetable.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/ratetableDate.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/rats.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/rats2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/reliability.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/residuals.coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/residuals.survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/residuals.survreg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/retinopathy.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/solder.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/stanford2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/statefig.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/strata.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/summary.aareg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/summary.coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/summary.pyears.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/summary.survexp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/summary.survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survexp.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survexp.us.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survfit.coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survfit.formula.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survfit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survfit.matrix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survfit.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survfit0.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survfitcoxph.fit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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$RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survreg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survreg.object.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/survregDtest.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/tcut.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/uspop2.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/vcov.coxph.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/veteran.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/xtfrm.Surv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/yates.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/html/yates_setup.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/TclInterface.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/TkCommands.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/tkProgressBar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/tkStartGUI.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/tk_choose.dir.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/tk_choose.files.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/tk_messageBox.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/tk_select.list.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/html/tkpager.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/CRANtools.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/HTMLheader.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/HTMLlinks.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/QC.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/Rcmd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/Rd2HTML.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/Rd2txt_options.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/RdTextFilter.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/Rdiff.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/Rdindex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/Rdutils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/SweaveTeXFilter.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/add_datalist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/assertCondition.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/bibstyle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/buildVignette.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/buildVignettes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/charsets.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/checkFF.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/checkMD5sums.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/checkPoFiles.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/checkRd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/checkRdaFiles.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/checkTnF.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/checkVignettes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/check_packages_in_dir.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/codoc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/compactPDF.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/delimMatch.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/dependsOnPkgs.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/encoded.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/fileutils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/find_gs_cmd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/getVignetteInfo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/loadRdMacros.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/makeLazyLoading.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/make_translations_pkg.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/makevars.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/md5sum.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/package_dependencies.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/package_native_routine_registration_skeleton.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/parseLatex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/parse_Rd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/print.via.format.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/pskill.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/psnice.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/read.00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/showNonASCII.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/startDynamicHelp.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/testInstalledPackage.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/texi2dvi.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/toHTML.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/toRd.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/toTitleCase.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/tools-defunct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/tools-deprecated.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/tools-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/vignetteInfo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/writePACKAGES.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/html/xgettext.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/00Index.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/BATCH.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/COMPILE.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/DLL.version.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/INSTALL.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/LINK.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/PkgUtils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/Question.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/REMOVE.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/RHOME.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/RShowDoc.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/RSiteSearch.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/Rconsole.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/Rprof.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/Rprofmem.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/Rscript.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/Rtangle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/RweaveLatex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/SHLIB.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/Sweave.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/alarm.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/apropos.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/aregexec.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/arrangeWindows.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/askYesNo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/aspell-utils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/aspell.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/available.packages.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/bibentry.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/browseEnv.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/browseURL.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/browseVignettes.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/bug.report.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/capture.output.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/changedFiles.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/charClass.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/choose.dir.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/choose.files.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/chooseBioCmirror.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/chooseCRANmirror.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/citEntry.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/citation.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/cite.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/clipboard.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/close.socket.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/combn.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/compareVersion.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/contrib.url.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/count.fields.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/create.post.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/data.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/dataentry.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/debugcall.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/debugger.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/demo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/download.file.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/download.packages.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/edit.data.frame.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/edit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/example.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/file.edit.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/filetest.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/findCRANmirror.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/findLineNum.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/fix.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/flush.console.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/format.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/getAnywhere.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/getFromNamespace.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/getParseData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/getS3method.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/getWindowsHandle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/getWindowsHandles.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/glob2rx.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/globalVariables.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/hasName.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/hashtab.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/head.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/help.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/help.request.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/help.search.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/help.start.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/hsearch-utils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/install.packages.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/installed.packages.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/isS3method.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/isS3stdGen.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/localeToCharset.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/ls_str.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/maintainer.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/make.packages.html.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/make.socket.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/memory.size.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/menu.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/methods.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/mirrorAdmin.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/modifyList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/news.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/nsl.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/object.size.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/package.skeleton.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/packageDescription.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/packageName.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/packageStatus.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/page.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/person.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/process.events.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/prompt.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/promptData.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/promptPackage.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/rcompgen.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/read.DIF.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/read.fortran.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/read.fwf.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/read.socket.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/read.table.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/readRegistry.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/recover.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/relist.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/remove.packages.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/removeSource.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/roman.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/rtags.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/savehistory.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/select.list.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/sessionInfo.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/setRepositories.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/setWindowTitle.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/shortPathName.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/sourceutils.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/stack.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/str.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/strcapture.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/summaryRprof.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/tar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/toLatex.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/txtProgressBar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/type.convert.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/untar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/unzip.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/update.packages.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/url.show.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/utils-defunct.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/utils-deprecated.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/utils-package.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/vignette.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/warnErrList.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/winDialog.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/winMenus.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/winProgressBar.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/winextras.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/write.table.html + for i in $RPM_BUILD_ROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/html/zip.html + chmod +x /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/R/sh/echo.sh + chmod +x /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/BATCH /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/COMPILE /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/INSTALL /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/LINK /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/R /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/REMOVE /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rcmd /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rd2pdf /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rdconv /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rdiff /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rprof /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rscript /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/SHLIB /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Stangle /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Sweave /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/build /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/check /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/config /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/exec /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/javareconf /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/libtool /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/mkinstalldirs /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/pager /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/rtags + chmod -x /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/CITATION /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/doc/R/CAPABILITIES + '[' '!' -d /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/include ']' + pushd /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R ~/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R ~/build/BUILD/R-4.2.1 + ln -s ../../include/R include + popd ~/build/BUILD/R-4.2.1 + '[' '!' -d /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/texmf/tex/latex/R ']' + mkdir -p /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/texmf/tex/latex + pushd /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/texmf/tex/latex ~/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/texmf/tex/latex ~/build/BUILD/R-4.2.1 + ln -s /usr/share/R/texmf/tex/latex R + popd ~/build/BUILD/R-4.2.1 + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 4.2.1-3.fc37 --unique-debug-suffix -4.2.1-3.fc37.x86_64 --unique-debug-src-base R-4.2.1-3.fc37.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/R-4.2.1 extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/bin/Rscript extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rscript extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/lib/libR.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/exec/R extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/KernSmooth/libs/KernSmooth.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/MASS/libs/MASS.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/Matrix/libs/Matrix.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/class/libs/class.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/cluster/libs/cluster.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/foreign/libs/foreign.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/libs/cairo.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grDevices/libs/grDevices.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/graphics/libs/graphics.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/grid/libs/grid.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/lattice/libs/lattice.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/methods/libs/methods.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/mgcv/libs/mgcv.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nlme/libs/nlme.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/nnet/libs/nnet.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/parallel/libs/parallel.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/rpart/libs/rpart.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/spatial/libs/spatial.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/splines/libs/splines.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/stats/libs/stats.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/survival/libs/survival.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tcltk/libs/tcltk.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/tools/libs/tools.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/library/utils/libs/utils.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/modules/R_X11.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/modules/R_de.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/modules/internet.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/modules/lapack.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/libRmath.so original debug info size: 21520kB, size after compression: 20108kB /usr/bin/sepdebugcrcfix: Updated 33 CRC32s, 0 CRC32s did match. 20112 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/bin/true + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.XgaUeT + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' -f /usr/lib/rpm/generate-rpm-note.sh ']' + /usr/lib/rpm/generate-rpm-note.sh R 4.2.1-3.fc37 x86_64 + cd R-4.2.1 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-4.2.1-3.fc37.x86_64 Processing files: R-core-4.2.1-3.fc37.x86_64 warning: Duplicate build-ids /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/bin/Rscript and /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rscript warning: absolute symlink: /usr/share/texmf/tex/latex/R -> /usr/share/R/texmf/tex/latex Provides: R(ABI) = 4.2 R(KernSmooth) = 2.23.20 R(MASS) = 7.3.57 R(Matrix) = 1.4.1 R(base) = 4.2.1 R(boot) = 1.3.28 R(class) = 7.3.20 R(cluster) = 2.1.3 R(codetools) = 0.2.18 R(compiler) = 4.2.1 R(datasets) = 4.2.1 R(foreign) = 0.8.82 R(grDevices) = 4.2.1 R(graphics) = 4.2.1 R(grid) = 4.2.1 R(lattice) = 0.20.45 R(methods) = 4.2.1 R(mgcv) = 1.8.40 R(nlme) = 3.1.157 R(nnet) = 7.3.17 R(parallel) = 4.2.1 R(rpart) = 4.1.16 R(spatial) = 7.3.15 R(splines) = 4.2.1 R(stats) = 4.2.1 R(stats4) = 4.2.1 R(survival) = 3.3.1 R(tcltk) = 4.2.1 R(tools) = 4.2.1 R(translations) = 4.2.1 R(utils) = 4.2.1 R-KernSmooth = 2.23.20 R-MASS = 7.3.57 R-Matrix = 1.4.1 R-base = 4.2.1 R-boot = 1.3.28 R-class = 7.3.20 R-cluster = 2.1.3 R-codetools = 0.2.18 R-compiler = 4.2.1 R-core = 4.2.1-3.fc37 R-core(x86-64) = 4.2.1-3.fc37 R-datasets = 4.2.1 R-foreign = 0.8.82 R-grDevices = 4.2.1 R-graphics = 4.2.1 R-grid = 4.2.1 R-lattice = 0.20.45 R-methods = 4.2.1 R-mgcv = 1.8.40 R-nlme = 3.1.157 R-nnet = 7.3.17 R-parallel = 4.2.1 R-rpart = 4.1.16 R-spatial = 7.3.15 R-splines = 4.2.1 R-stats = 4.2.1 R-stats4 = 4.2.1 R-survival = 3.3.1 R-tcltk = 4.2.1 R-tools = 4.2.1 R-translations = 4.2.1 R-utils = 4.2.1 config(R-core) = 4.2.1-3.fc37 libR.so()(64bit) Requires(interp): /bin/sh /bin/sh /bin/sh Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /bin/sh Requires(postun): /bin/sh Requires(posttrans): /bin/sh Requires: /bin/sh ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.2.5)(64bit) libR.so()(64bit) libX11.so.6()(64bit) libXmu.so.6()(64bit) libXt.so.6()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.15)(64bit) libc.so.6(GLIBC_2.16)(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.27)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.6)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_2.8)(64bit) libcairo.so.2()(64bit) libcurl.so.4()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgobject-2.0.so.0()(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libicui18n.so.71()(64bit) libicuuc.so.71()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) liblzma.so.5()(64bit) liblzma.so.5(XZ_5.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libpango-1.0.so.0()(64bit) libpangocairo-1.0.so.0()(64bit) libpcre2-8.so.0()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libreadline.so.8()(64bit) libtcl8.6.so()(64bit) libtiff.so.5()(64bit) libtiff.so.5(LIBTIFF_4.0)(64bit) libtk8.6.so()(64bit) libtre.so.5()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Obsoletes: R-Matrix < 0.999375-7 Recommends: cups Processing files: R-core-devel-4.2.1-3.fc37.x86_64 Provides: R-Matrix-devel = 1.4.1 R-core-devel = 4.2.1-3.fc37 R-core-devel(x86-64) = 4.2.1-3.fc37 pkgconfig(libR) = 4.2.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Obsoletes: R-Matrix-devel < 0.999375-7 Processing files: R-devel-4.2.1-3.fc37.x86_64 Processing files: R-java-4.2.1-3.fc37.x86_64 Processing files: R-java-devel-4.2.1-3.fc37.x86_64 Processing files: libRmath-4.2.1-3.fc37.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.O6LbHX + umask 022 + cd /builddir/build/BUILD + cd R-4.2.1 + DOCDIR=/builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/doc/libRmath + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/doc/libRmath + cp -pr doc/COPYING /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/share/doc/libRmath + RPM_EC=0 ++ jobs -p + exit 0 Provides: libRmath = 4.2.1-3.fc37 libRmath(x86-64) = 4.2.1-3.fc37 libRmath.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) rtld(GNU_HASH) Processing files: libRmath-devel-4.2.1-3.fc37.x86_64 Provides: libRmath-devel = 4.2.1-3.fc37 libRmath-devel(x86-64) = 4.2.1-3.fc37 pkgconfig(libRmath) = 4.2.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Processing files: libRmath-static-4.2.1-3.fc37.x86_64 Provides: libRmath-static = 4.2.1-3.fc37 libRmath-static(x86-64) = 4.2.1-3.fc37 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-debugsource-4.2.1-3.fc37.x86_64 Provides: R-debugsource = 4.2.1-3.fc37 R-debugsource(x86-64) = 4.2.1-3.fc37 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-debuginfo-4.2.1-3.fc37.x86_64 Provides: R-debuginfo = 4.2.1-3.fc37 R-debuginfo(x86-64) = 4.2.1-3.fc37 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(x86-64) = 4.2.1-3.fc37 Processing files: R-core-debuginfo-4.2.1-3.fc37.x86_64 warning: Duplicate build-ids /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib/debug/usr/bin/Rscript-4.2.1-3.fc37.x86_64.debug and /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib/debug/usr/lib64/R/bin/Rscript-4.2.1-3.fc37.x86_64.debug Provides: R-core-debuginfo = 4.2.1-3.fc37 R-core-debuginfo(x86-64) = 4.2.1-3.fc37 debuginfo(build-id) = 03e26f8bd9e656516fc39a6555a1e1c9f2b8a7db debuginfo(build-id) = 0521e635db3a27cd49d7ce04977aa8e6a5b7ff20 debuginfo(build-id) = 05f6af98cd4f0bb57cba7a801a22ec8bdb1c229d debuginfo(build-id) = 0e4956028032675f81b3858dbdf8e5684c118952 debuginfo(build-id) = 1522d1aa82b97755085617044b0afd72a5da4ab4 debuginfo(build-id) = 18c1e617862cd4d4a55f422c93038ed475c8ff23 debuginfo(build-id) = 18de3c7538a202c54f584c8558c39a677716c7f1 debuginfo(build-id) = 273166134ac55591416f79ff4a6e25d725969da8 debuginfo(build-id) = 3ec97bdc4e8a3854535dc2875df3036b3d6c5b23 debuginfo(build-id) = 54aaccdb835e6796755fe3416bfd4ce61e293933 debuginfo(build-id) = 55a2cbf6c778f1e439810f69e9ae3bb147a500a4 debuginfo(build-id) = 5708f8dfe1022d03c747354e1f8c6dd463d5ff09 debuginfo(build-id) = 579c861e8eca0c21d8898125d7b7bf59f0ed1f5a debuginfo(build-id) = 6bcb29c4b0842a23cb644b7f8c0085baf7910c2f debuginfo(build-id) = 6c2f1fc2e759c9f8103f6bcfa32130076708f781 debuginfo(build-id) = 704d8fb3a793e3ad498b85a4dbb00d5eb881805b debuginfo(build-id) = 755da6dad6659b7714c9ff213b3c5a0c6e7cc5b6 debuginfo(build-id) = 7c798b165c4fd5cc8fcddfde14b0c4e08c978bbd debuginfo(build-id) = 96ceb459b23d88365de5eae97a152e101675e77b debuginfo(build-id) = 9a3a77b9095f744dad8bc4e799ff7e18d601824a debuginfo(build-id) = a027a6aa104cc20ffa56354354aa54c9e8c6aaaa debuginfo(build-id) = a436fdd277ccfafd8fb808bf068097b366ddc4ac debuginfo(build-id) = a4a686355c2710fea12ed416b6feaad8f3a5e903 debuginfo(build-id) = a576ad2d40270eb819c0805619d9788d20997fe4 debuginfo(build-id) = b03de9b4d6a430119e03fa7c0eb7b57de48803f1 debuginfo(build-id) = c740ddeb99a80e4591ee8df09695a49c3333dfba debuginfo(build-id) = cc7f6c6b11b3390691c67840bb6bcd7ab313537e debuginfo(build-id) = cee59c9c5a1d223ac1107d71c420f6ed34ae6bfb debuginfo(build-id) = d9624d1cb61f2eb346d0e10839f5c494f29b9737 debuginfo(build-id) = e5afbec1172d5982409d97c99b613bf3f9dbad1e debuginfo(build-id) = ed616ba291341ef0bea80842003d8bff3f065bb1 debuginfo(build-id) = nilnil libR.so-4.2.1-3.fc37.x86_64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(x86-64) = 4.2.1-3.fc37 Processing files: libRmath-debuginfo-4.2.1-3.fc37.x86_64 Provides: debuginfo(build-id) = 204b1a6da5007fdb16a33ecace3428cd6d63745b libRmath-debuginfo = 4.2.1-3.fc37 libRmath-debuginfo(x86-64) = 4.2.1-3.fc37 libRmath.so-4.2.1-3.fc37.x86_64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(x86-64) = 4.2.1-3.fc37 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64 Wrote: /builddir/build/RPMS/R-core-debuginfo-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/R-debugsource-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/libRmath-static-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/libRmath-debuginfo-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/R-core-devel-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/libRmath-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/R-debuginfo-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/libRmath-devel-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/R-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/R-devel-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/R-java-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/R-java-devel-4.2.1-3.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/R-core-4.2.1-3.fc37.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.5VZBB5 + umask 022 + cd /builddir/build/BUILD + cd R-4.2.1 + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.TIv9K5 + umask 022 + cd /builddir/build/BUILD + rm -rf R-4.2.1 R-4.2.1.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: Duplicate build-ids /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/bin/Rscript and /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib64/R/bin/Rscript absolute symlink: /usr/share/texmf/tex/latex/R -> /usr/share/R/texmf/tex/latex Duplicate build-ids /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib/debug/usr/bin/Rscript-4.2.1-3.fc37.x86_64.debug and /builddir/build/BUILDROOT/R-4.2.1-3.fc37.x86_64/usr/lib/debug/usr/lib64/R/bin/Rscript-4.2.1-3.fc37.x86_64.debug Finish: rpmbuild R-4.2.1-3.fc37.src.rpm Finish: build phase for R-4.2.1-3.fc37.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1660163346.326884/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1660163346.326884/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1660163346.326884/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/R-4.2.1-3.fc37.src.rpm) Config(child) 14 minutes 59 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool