# BUNDLING NOTES # Macaulay2's memory management scheme requires close cooperation with libgc, # and some of the supporting libraries must be compiled with special options to # accomplish this. In particular, Macaulay2 needs: # - mathicgb configured --without-tbb # - mpfr configured with --disable-thread-safe # - flint linked with the GC-enabled mpfr # - factory (from Singular) configured with --disable-omalloc --enable-streamio # and linked with the flint that is linked with the GC-enabled mpfr # Since the main Fedora packages are not built in this way, we are forced to # bundle these packages to avoid random GC-related crashes. The packages # memtailor and mathic, which sit underneath mathicgb, must also be bundled or # we get random GC-related crashes for an as yet undiagnosed reason. # # We have to use the static versions of the libfplll and givaro libraries. # They have global objects whose constructors run before GC is initialized. # If we allow the shared libraries to be unloaded, which happens as a normal # part of Macaulay2's functioning, then GC tries to free objects it did not # allocate, which leads to a segfault. # # We have to bundle the linbox package. It has global constructors that cause # the same problem as libfplll. %global m2url https://github.com/Macaulay2/M2 %global emacscommit 01af405c5c92f90e4009ff580a1b1dcefe43a714 %global emacsurl https://github.com/Macaulay2/M2-emacs %global emacsshort %(cut -b -7 <<< %{emacscommit}) # Address randomization interferes with Macaulay2's memory management scheme, # and linking with -z now breaks configure. %undefine _hardened_build ## define to create -common subpkg #global common 1 #if 0%%{?fedora} # use system normaliz %global system_normaliz 1 #endif # standardize on gmp instead of mpir (mostly for pari/sagemath) %global gmp 1 %global ISSUE %{?fedora:Fedora-%{fedora}}%{?rhel:RedHatEnterprise-%{rhel}} %global M2_machine %{_target_cpu}-Linux-%{ISSUE} # The examples contain some python files which should not be byte compiled %global _python_bytecompile_extra 0 # Starting with GCC 12, Macaulay2 segfaults during the build on all # architectures when LTO is enabled. (With GCC 11, s390x did this, but the # other architectures did not.) Until somebody can figure out what is going # on, disable LTO universally. %define _lto_cflags %{nil} Summary: System for algebraic geometry and commutative algebra Name: Macaulay2 Version: 1.20 Release: 1%{?dist} License: GPLv2 or GPLv3 URL: https://macaulay2.com/ %if 0%{?snap:1} Source0: %{name}-%{version}-%{snap}.tar.xz %else Source0: %{m2url}/archive/release-%{version}/%{name}-%{version}.tar.gz %endif Source1: %{emacsurl}/tarball/%{emacscommit}/M2-emacs-%{emacsshort}.tar.gz # Various sizes of the planets icon from macaulay2.com. See README.icons in # the tar file for details on how these icons were created. Source10: Macaulay2-icons.tar.xz Source11: Macaulay2.desktop Source12: Macaulay2.metainfo.xml Source20: etags.sh ## BUNDLED code # Normaliz must sometimes be bundled due to version differences %if ! %system_normaliz %global normalizver 3.9.2 Source100: http://www.math.uiuc.edu/Macaulay2/Downloads/OtherSourceCode/normaliz-%{normalizver}.tar.gz Provides: bundled(normaliz) = %{normalizver} %endif # MPFR is bundled because it must be built with different threading options %global mpfrver 4.1.0 Source101: http://www.mpfr.org/mpfr-%{mpfrver}/mpfr-%{mpfrver}.tar.xz Provides: bundled(mpfr) = %{mpfrver} # FLINT is bundled because it must be linked with the specially-built MPFR %global flintver 2.8.4 Source102: http://www.flintlib.org/flint-%{flintver}.tar.gz Provides: bundled(flint) = %{flintver} # FACTORY is bundled because it must be built with special options %global factoryver 4.2.1 Source103: http://faculty.math.illinois.edu/Macaulay2/Downloads/OtherSourceCode/factory-%{factoryver}.tar.gz Provides: bundled(factory) = %{factoryver} # MATHICGB is bundled because it must be built with different threading options %global mathicgbver 1.0 %global mathicgbcommit 7c2bea4b6c7bd72a1b732663a9b01fa36dd9bf4f Source104: https://github.com/Macaulay2/mathicgb/tarball/%{mathicgbcommit}/mathicgb-%{mathicgbver}.tar.gz Provides: bundled(mathicgb) = %{mathicgbver} # GTEST is bundled because MATHICGB refuses to build otherwise %global gtestver 1.10.0 Source105: https://faculty.math.illinois.edu/Macaulay2/Downloads/OtherSourceCode/gtest-%{gtestver}.tar.gz # MEMTAILOR is bundled because it causes garbage collector crashes otherwise %global memtailorver 1.0 %global memtailorcommit 95dbac776c475f4b1c2b08a8e8c6def14c8aaf9a Source106: https://github.com/Macaulay2/memtailor/tarball/%{memtailorcommit}/memtailor-%{memtailorver}.tar.gz Provides: bundled(memtailor) = %{memtailorver} # MATHIC is bundled because it causes garbage collector crashes otherwise %global mathicver 1.0 %global mathiccommit 18ff8de1f5b5102ef291e450522c4930cf9eb7f2 Source107: https://github.com/Macaulay2/mathic/tarball/%{mathiccommit}/mathic-%{mathicver}.tar.gz Provides: bundled(mathic) = %{mathicver} # LINBOX is bundled because it introduces static global objects %global linboxver 1.6.3 Source108: https://github.com/linbox-team/linbox/releases/download/v%{linboxver}/linbox-%{linboxver}.tar.gz Provides: bundled(linbox) = %{linboxver} ## PATCHES FOR BUNDLED code # Work around an ambiguous overload on 32-bit platforms Source200: linbox-1.6.3.patch # MPFR bug fixes from mpfr upstream. Source201: mpfr-4.1.0.patch # Fix mathicgb build on big endian machines and with gcc 11 Source202: mathicgb-1.0.patch ## FAKE library tarballs that convince Macaulay2 to use the system versions Source300: frobby_v0.9.0.tar.gz Source301: cddlib-094m.tar.gz Source302: lapack-3.9.0.tgz Source303: 4ti2-1.6.9.tar.gz Source304: libfplll-5.2.0.tar.gz Source305: gfan0.6.2.tar.gz Source306: givaro-4.1.1.tar.gz Source307: lrslib-071a.tar.gz Source308: TOPCOM-0.17.8.tar.gz Source309: cohomCalg-0.32.tar.gz Source310: glpk-4.59.tar.gz Source311: Csdp-6.2.0.tgz Source312: mpsolve-3.2.1.tar.gz # let Fedora optflags override the defaults Patch0: %{name}-1.15-optflags.patch # give the build a little more time and space than upstream permits Patch1: %{name}-1.16-ulimit.patch # drop 'tests' from default make target Patch2: %{name}-1.17-default_make_targets.patch # disable check for gftables Patch3: %{name}-1.18-no_gftables.patch # adapt to libfplll 5.2.1 Patch4: %{name}-1.15-fplll.patch # do not override the debug level Patch5: %{name}-1.17-configure.patch # Fix "error: in conversion to html, unknown TeX control sequence(s): \rightarrow" Patch6: %{name}-1.16-rightarrow.patch # Fix LTO warnings about mismatched declarations and definitions Patch7: %{name}-1.18-lto.patch # Fix a crash when building documentation Patch8: https://github.com/Macaulay2/M2/pull/2536.patch BuildRequires: 4ti2 BuildRequires: autoconf BuildRequires: autoconf-archive BuildRequires: bison BuildRequires: boost-devel BuildRequires: cddlib-devel BuildRequires: chrpath BuildRequires: cohomCalg BuildRequires: csdp-tools BuildRequires: desktop-file-utils %if 0%{?fedora} BuildRequires: doxygen-latex %else BuildRequires: doxygen %endif BuildRequires: eigen3-static # etags BuildRequires: emacs BuildRequires: expat-devel BuildRequires: factory-gftables BuildRequires: fflas-ffpack-devel BuildRequires: flex BuildRequires: flexiblas-devel BuildRequires: gawk BuildRequires: gcc-c++ BuildRequires: gcc-gfortran BuildRequires: gdb BuildRequires: gdbm-devel BuildRequires: gettext-devel BuildRequires: gfan BuildRequires: git-core BuildRequires: givaro-static BuildRequires: glpk-devel %if 0%{?gmp} BuildRequires: gmp-devel %else BuildRequires: mpir-devel %endif BuildRequires: gtest-devel BuildRequires: iml-devel BuildRequires: info BuildRequires: libappstream-glib BuildRequires: libgfan-devel BuildRequires: libtool BuildRequires: libatomic_ops-devel BuildRequires: libfplll-static BuildRequires: libfrobby-devel BuildRequires: libnauty-devel BuildRequires: libnormaliz-devel >= 3.9.2 BuildRequires: libtool BuildRequires: lrslib-devel BuildRequires: lrslib-utils BuildRequires: m4ri-devel BuildRequires: m4rie-devel BuildRequires: make BuildRequires: mariadb-devel BuildRequires: mpfi-devel BuildRequires: mpsolve-devel BuildRequires: nauty BuildRequires: normaliz BuildRequires: ntl-devel BuildRequires: pkgconfig(bdw-gc) >= 7.6.2 BuildRequires: pkgconfig(libxml-2.0) BuildRequires: pkgconfig(ncurses) BuildRequires: polymake BuildRequires: python3-devel BuildRequires: qd-devel BuildRequires: readline-devel BuildRequires: tbb-devel BuildRequires: texinfo BuildRequires: time BuildRequires: tinyxml2-devel BuildRequires: TOPCOM BuildRequires: transfig BuildRequires: valgrind Requires: 4ti2 Requires: cohomCalg Requires: csdp-tools Requires: emacs-filesystem Requires: factory-gftables Requires: gfan Requires: hicolor-icon-theme Requires: lrslib-utils Requires: nauty Requires: normaliz Requires: TOPCOM # M2-help Requires: xdg-utils Recommends: mathicgb %if 0%{?common} Requires: %{name}-common = %{version}-%{release} %else Obsoletes: Macaulay2-common < %{version}-%{release} Provides: Macaulay2-common = %{version}-%{release} %endif Obsoletes: Macaulay2-doc < %{version}-%{release} Provides: Macaulay2-doc = %{version}-%{release} Obsoletes: Macaulay2-emacs < %{version}-%{release} Provides: Macaulay2-emacs = %{version}-%{release} Provides: macaulay2 = %{version}-%{release} # Macaulay2 no longer builds successfully on 32-bit platforms # https://bugzilla.redhat.com/show_bug.cgi?id=1874318 ExcludeArch: %{ix86} %{arm} # Do not advertise the bundled mpfr %global __provides_exclude libmpfr.so* %description Macaulay 2 is a new software system devoted to supporting research in algebraic geometry and commutative algebra written by Daniel R. Grayson and Michael E. Stillman %package common Summary: Common files for %{name} Requires: %{name} = %{version}-%{release} BuildArch: noarch %description common %{summary}. %prep %setup -q -n M2-release-%{version}/M2 %setup -q -n M2-release-%{version}/M2 -T -D -a 10 tar -C Macaulay2/editors/emacs --strip-components=1 -xzf %{SOURCE1} install -p -m755 %{SOURCE20} ./etags ## bundled code %if ! %system_normaliz install -p -m644 %{SOURCE100} BUILD/tarfiles/ %endif install -p -m644 %{SOURCE101} %{SOURCE102} %{SOURCE103} %{SOURCE105} \ %{SOURCE108} BUILD/tarfiles/ sed -i 's/\(VERSION = \).*/\1%{mpfrver}/' libraries/mpfr/Makefile.in sed -e 's/\(VERSION = \).*/\1%{linboxver}/' \ -e 's/^#\(PATCHFILE\)/\1/' \ -e 's,--with-gmp.*,GIVARO_CFLAGS=-I$(LIBRARIESDIR) GIVARO_LIBS="%{_libdir}/libgivaro.a",' \ -i libraries/linbox/Makefile.in tar -C submodules/mathicgb -xf %{SOURCE104} --strip-components=1 patch -d submodules/mathicgb -p0 < %{SOURCE202} tar -C submodules/memtailor -xf %{SOURCE106} --strip-components=1 tar -C submodules/mathic -xf %{SOURCE107} --strip-components=1 ## patches for bundled code sed -e 's,--with-blas,&=%{_includedir}/flexiblas --with-ntl,' \ -e 's,2\.6\.0,%{flintver},' \ -i libraries/flint/Makefile.in cp -p %{SOURCE200} libraries/linbox/patch-%{linboxver} sed -e '/^TARFILE =/iPATCHFILE = @abs_srcdir@/patch-$(VERSION)' \ -i libraries/mpfr/Makefile.in cp -p %{SOURCE201} libraries/mpfr/patch-%{mpfrver} ## fake library tarballs install -p -m644 %{SOURCE300} %{SOURCE301} %{SOURCE302} %{SOURCE303} \ %{SOURCE304} %{SOURCE305} %{SOURCE306} %{SOURCE307} %{SOURCE308} \ %{SOURCE309} %{SOURCE310} %{SOURCE311} %{SOURCE312} BUILD/tarfiles/ sed -i '/PRECONFIGURE/d' libraries/{4ti2,cddlib,givaro,normaliz,topcom}/Makefile.in sed -i 's/VERSION = 4\.0\.4/VERSION = 5.2.0/;/PATCHFILE/d' libraries/fplll/Makefile.in sed -i '/PATCHFILE/d' libraries/{csdp,frobby,gfan,givaro,mpsolve,normaliz,topcom}/Makefile.in sed -i '/INSTALLCMD/,/stdinc/d' libraries/frobby/Makefile.in sed -i 's,install \(lib.*\.a\),ln -s %{_libdir}/\1,' libraries/lapack/Makefile.in ## fake givaro submodule tar -C submodules/givaro --strip-components=1 -xzf %{SOURCE306} %patch0 -p1 -b .optflags %patch1 -p1 -b .ulimit %patch2 -p1 -b .default_make_targets %patch3 -p1 -b .no_gftables # factory-gftables symlink mkdir -p BUILD/%{_target_platform}/usr-dist/common/share/Macaulay2/Core ln -s %{_datadir}/factory \ BUILD/%{_target_platform}/usr-dist/common/share/Macaulay2/Core/factory %patch4 -p1 -b .fplll %patch5 -p1 -b .configure %patch6 -p1 -b .rightarrow %patch7 -p1 -b .lto %patch8 -p2 -b .crash2536 # repeatable builds: inject a node name sed -i 's,`uname -n`,build.fedoraproject.org,' configure.ac # gdb is used during the build; let it autoload some files if [ "$HOME" = "/builddir" ]; then echo "set auto-load safe-path /" > /builddir/.gdbinit fi # Use, but don't build, cddlib, fflas-ffpack, and gc. Use the static versions # of libfplll and givaro. Link with flexiblas instead of the reference blas # and lapack. Fix typos. sed -e 's/BUILD_cddlib=yes/BUILD_cddlib=no/' \ -e 's/BUILD_gc=yes/BUILD_gc=no/' \ -e 's/BUILD_fflas_ffpack=yes/BUILD_fflas_ffpack=no/' \ -e 's,-lfplll,%{_libdir}/libfplll.a -lqd,' \ -e 's,`\$PKG_CONFIG --libs givaro`,%{_libdir}/libgivaro.a,' \ -e 's,-lgivaro,%{_libdir}/libgivaro.a,' \ -e 's,-llapack -lrefblas,-lflexiblas,' \ -e 's,\$added_fclibs != yes,"$added_fclibs" != yes,' \ -i configure.ac # We call it flint. Upstream calls it flint2. sed -i 's/\(LIBNAME = flint\)2/\1/' libraries/flint/Makefile.in # Cannot do git submodule operations on a koji builder sed -i 's/git-checkout-in-\$1, git-checkout-warning-for-\$1//' GNUmakefile.in # (re)generate configure autoreconf -fi . %build %ifarch s390x # For as yet unknown reasons, when this package is built with optimization # level -O2 on s390x, the mathicgb code accesses out-of-bounds array elements. # In addition, valgrind shows accesses to uninitialized elements of arrays # that should not have any uninitialized elements. The code eventually # segfaults. When built with -O1 and LTO, the linker segfaults. Until we can # diagnose and fix these issues, we build with -O1 and without LTO on s390x. %define _lto_cflags %{nil} optflags=$(sed 's/-O2/-O/g' <<< "%{build_cflags}") %else optflags="%{build_cflags}" %endif # Possible bug in Macaulay2 1.19: the memtailor, mathic, and mathicgb headers # cannot be found. We work around this here. See if the problem has been fixed # in later versions. CPPFLAGS="-I$PWD/submodules/memtailor/src -I$PWD/submodules/mathic/src -I$PWD/submodules/mathicgb/src" ## configure macro currently broken, due to some odd prefix-checks. probably fixable -- Rex mkdir -p BUILD/%{_target_platform} pushd BUILD/%{_target_platform} CPPFLAGS="$CPPFLAGS -I%{_includedir}/cddlib -I%{_includedir}/frobby" \ CFLAGS="$optflags -fsigned-char" \ CXXFLAGS="$optflags -fsigned-char" \ LIBS="-lflexiblas" \ ../../configure \ --build=%{_build} \ --host=%{_host} \ --with-issue=%{ISSUE} \ --prefix=%{_prefix} \ --disable-dumpdata \ --enable-shared \ --disable-fc-lib-ldflags \ --disable-strip \ --enable-fplll \ --enable-linbox \ %if 0%{?gmp} --with-integer-package=gmp \ %else --with-integer-package=mpir \ %endif --with-unbuilt-programs="cddplus nauty" \ --enable-build-libraries="mpfr flint factory lapack fplll givaro linbox gtest" # The list of libraries and submodules above should include only those that: # 1. We bundle (mpfr, flint, factory, and linbox) # 2. We sneakily substitute one library for another (lapack -> flexiblas) # 3. Have to be linked with the static library (fplll and givaro) popd # link with static libraries when global constructors run prior to GC # initialization. Otherwise, unloading the shared object causes a crash. # We have to do this because we pick up references to -lgivaro from other # packages during the configure script execution. for fil in $(grep -Erl -e '-lfplll|-lgivaro' .); do sed -e 's,-lfplll,%{_libdir}/libfplll.a,' \ -e 's,-lgivaro,%{_libdir}/libgivaro.a,' \ -i.orig $fil touch -r $fil.orig $fil rm -f $fil.orig done make -C BUILD/%{_target_platform} VERBOSE=true Verbose=true IgnoreExampleErrors=true # log errors find BUILD/%{_target_platform}/ -name *.errors -execdir echo {} \; -execdir cat {} \; %install %make_install -C BUILD/%{_target_platform} IgnoreExampleErrors=true # link, don't copy, the binaries mbindir=%{buildroot}%{_libexecdir}/Macaulay2/bin for fil in checkregularity chiro2circuits chiro2cocircuits cohomcalg csdp lrs \ normaliz points2allfinetriangs points2alltriangs points2chiro \ points2finetriang points2finetriangs points2flips points2nallfinetriangs \ points2nalltriangs points2nfinetriangs points2nflips points2ntriangs \ points2triangs points2volume; do rm -f $mbindir/$fil ln -s %{_bindir}/$fil $mbindir/$fil done # app img for sz in 64 72 96 128 192 256 512; do sz2=${sz}x${sz} mkdir -p %{buildroot}%{_datadir}/icons/hicolor/$sz2/apps install -p -m644 icons/NinePlanets-${sz2}.png \ %{buildroot}%{_datadir}/icons/hicolor/$sz2/apps/%{name}.png done desktop-file-install --vendor="" \ --dir=%{buildroot}%{_datadir}/applications \ %{SOURCE11} mkdir -p %{buildroot}%{_metainfodir} install -pm 644 %{SOURCE12} %{buildroot}%{_metainfodir}/%{name}.metainfo.xml appstream-util validate-relax --nonet \ %{buildroot}%{_metainfodir}/%{name}.metainfo.xml # Byte compile the Emacs files, and move the documentation pushd %{buildroot}%{_emacs_sitelispdir}/macaulay2 mv M2-emacs* %{buildroot}%{_pkgdocdir} mv README.md %{buildroot}%{_pkgdocdir}/README-emacs.md %{_emacs_bytecompile} *.el popd ## unpackaged files # info dir rm -fv %{buildroot}%{_infodir}/dir # Delete misinstalled memtailor, mathic, and mathicgb libraries rm -fr %{buildroot}/builddir %check # The test suite has grown to the point where it takes many hours to run. # Just run the most basic tests. make check -C BUILD/%{_target_platform}/Macaulay2/e make check -C BUILD/%{_target_platform}/Macaulay2/bin %files %{_bindir}/M2 %{_bindir}/M2-binary %{_prefix}/lib/Macaulay2/ %{_libexecdir}/Macaulay2/ %if 0%{?common} %files common %endif %{_datadir}/Macaulay2/ %{_datadir}/applications/*Macaulay2.desktop %{_datadir}/icons/hicolor/*/*/* %{_metainfodir}/%{name}.metainfo.xml %{_docdir}/Macaulay2/ %{_infodir}/*.info* %{_mandir}/man1/* %{_emacs_sitelispdir}/macaulay2/ %changelog * Thu Aug 4 2022 Jerry James - 1.20-1 - Version 1.20 * Wed Jul 20 2022 Fedora Release Engineering - 1.19.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Wed May 04 2022 Thomas Rodgers - 1.19.1-2 - Rebuilt for Boost 1.78 * Mon Feb 21 2022 Jerry James - 1.19.1-1 - Version 1.19.1 - Disable LTO to work around segfaults * Wed Jan 19 2022 Fedora Release Engineering - 1.19-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild * Wed Nov 24 2021 Jerry James - 1.19-1 - Version 1.19 * Fri Aug 06 2021 Jonathan Wakely - 1.18-4 - Rebuilt for Boost 1.76 * Wed Jul 21 2021 Fedora Release Engineering - 1.18-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild * Tue Jun 29 2021 Jerry James - 1.18-2 - Rebuild for ntl 11.5.1 * Thu Jun 17 2021 Jerry James - 1.18-1 - Version 1.18 * Thu Feb 18 2021 Jerry James - 1.17-2 - Reduce optimization level on s390x to work around FTBFS - Install metainfo - Add -mathic patch to silence GCC warnings - Add -lto patch to silence LTO warnings * Mon Jan 25 2021 Fedora Release Engineering - 1.17-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild * Sat Jan 16 2021 Jerry James - 1.17-1 - Version 1.17 - Drop upstreamed patches: -nauty-paths, -format - Merge -gcc11 patch into mathicgb-1.0.patch * Thu Oct 15 2020 Jeff Law - 1.16-2 - Add missing #includes for gcc-11 * Mon Aug 31 2020 Jerry James - 1.16-1 - Version 1.16 - Drop upstreamed patch: -xdg_open - Add -ulimit patch for the slower builders - Add -format and -rightarrow patches - Bundle packages due to garbage collector crashes: linbox, memtailor, mathic - Drop the XEmacs subpackage; XEmacs support no longer works * Sun Aug 16 2020 Iñaki Úcar - 1.15.1.0-5 - https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager * Sat Aug 01 2020 Fedora Release Engineering - 1.15.1.0-4 - Second attempt - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Mon Jul 27 2020 Fedora Release Engineering - 1.15.1.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Wed Jul 1 2020 Jeff Law - 1.15.1.0-2 - Disable LTO * Wed Jun 3 2020 Jerry James - 1.15.1.0-1 - Version 1.15.1.0 - Drop upstreamed patches: -no_Werror, -mpir, -pthreads, -fflas-ffpack, -fno-common, -gtest, -pthreads * Tue Feb 11 2020 Jerry James - 1.14.0.1-4 - Add -fno-common patch to fix FTBFS with GCC 10 * Tue Jan 28 2020 Fedora Release Engineering - 1.14.0.1-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild * Fri Jan 10 2020 Jerry James - 1.14.0.1-3 - Rebuild for ntl 11.4.3 * Fri Nov 1 2019 Jerry James - 1.14.0.1-2 - Rebuild for givaro 4.1.1, fflas-ffpack 2.4.3, and linbox 1.6.3 * Thu Sep 26 2019 Jerry James - 1.14.0.1-1 - Macaulay2-1.14.0.1 - Drop upstreamed -format and -exception patches - Also bundle libmpc since it is linked with mpfr - Drop fix for F26 symlink-file snafu - Build with python 3 instead of python 2 * Wed Jul 24 2019 Fedora Release Engineering - 1.12.0.1-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Sun Feb 17 2019 Igor Gnatenko - 1.12.0.1-5 - Rebuild for readline 8.0 * Thu Jan 31 2019 Fedora Release Engineering - 1.12.0.1-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Tue Nov 20 2018 Jerry James - 1.12.0.1-3 - Rebuild for lrslib 070 * Wed Oct 10 2018 Jerry James - 1.12.0.1-2 - Rebuild for ntl 11.3.0 - Build with openblas instead of atlas (bz 1618938) * Fri Aug 10 2018 Jerry James - 1.12.0.1-1 - Macaulay2-1.12.0.1 - Replace tiny icon of unknown origin with various sizes of upstream's icon - Remove deprecated entries from the desktop file - Add upstream mpfr 3.1.6 patches * Thu Jul 12 2018 Fedora Release Engineering - 1.11-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jul 3 2018 Jerry James - 1.11-2 - Rebuild for ntl 11.1.0 - Remove scriptlets that call install-info - Do not byte compile python files in the examples * Sat Jun 2 2018 Jerry James - 1.11-1 - Macaulay2-1.11 - Drop upstreamed patches: -verbose_build, -givaro, -pari, -endian - New patches: -fflas-ffpack, -format, -exception, -fplll, -configure - Update bundled software - Refresh INFO_FILES list * Fri Feb 09 2018 Igor Gnatenko - 1.9.2-8 - Escape macros in %%changelog * Wed Feb 07 2018 Fedora Release Engineering - 1.9.2-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Thu Jan 18 2018 Igor Gnatenko - 1.9.2-6 - Remove obsolete scriptlets * Wed Oct 11 2017 Jerry James - 1.9.2-5 - Link rather than copy the normaliz binary - Fix accidental replacement of factory symlink with a directory * Sat Sep 30 2017 Jerry James - 1.9.2-4 - Rebuild for ntl 10.5.0 * Wed Aug 02 2017 Fedora Release Engineering - 1.9.2-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering - 1.9.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Wed Apr 5 2017 Jerry James - 1.9.2-1 - Macaulay2-1.9.2 - Drop upstreamed patches: -disable_broken_debug_functions, -gc, -rpath, -rh_configure_hack - Add patches: -givaro, -gtest, -pari - Create fake library and submodule tarballs to fool the build system into building in support for system libraries - Bundle mpfr, flint, and factory to avoid garbage collector crashes - Replace the (X)Emacs triggers with (x)emacs-filesystem dependencies - New URLs * Fri Feb 10 2017 Fedora Release Engineering - 1.6-34 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild * Thu Jan 12 2017 Igor Gnatenko - 1.6-33 - Rebuild for readline 7.x * Thu Oct 20 2016 Jerry James - 1.6-32 - Rebuild for ntl 10.1.0 * Mon Sep 5 2016 Jerry James - 1.6-31 - Rebuild for ntl 9.11.0 * Fri Aug 12 2016 Jerry James - 1.6-30 - Rebuild for fflas-ffpack 2.2.2, givaro 4.0.2, and linbox 1.4.2 * Mon Jul 25 2016 Jerry James - 1.6-29 - Rebuild for ntl 9.10.0 * Thu Jun 2 2016 Jerry James - 1.6-28 - Rebuild for ntl 9.9.1 * Fri Apr 29 2016 Jerry James - 1.6-27 - Rebuild for ntl 9.8.0 - Nauty is now available - Drop -gcc-template-bug patch; gcc bug has been fixed * Sat Mar 19 2016 Jerry James - 1.6-26 - Rebuild for ntl 9.7.0 * Sat Feb 20 2016 Jerry James - 1.6-25 - Rebuild for ntl 9.6.4 - Add -gcc-template-bug patch to work around gcc bug (bz 1307282) * Wed Feb 03 2016 Fedora Release Engineering - 1.6-24 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild * Thu Jan 14 2016 Jonathan Wakely - 1.6-23 - Rebuilt for Boost 1.60 * Fri Dec 4 2015 Jerry James - 1.6-22 - Rebuild for ntl 9.6.2 - Add python2 BR for the tests * Sat Oct 17 2015 Kalev Lember - 1.6-21 - Rebuilt for libntl soname bump * Fri Oct 16 2015 Jerry James - 1.6-20 - Rebuild for ntl 9.4.0 * Tue Sep 29 2015 Rex Dieter 1.6-19 - refresh config.guess/config.sub hack, fix FTBFS on aarch64 * Sat Sep 19 2015 Jerry James - 1.6-18 - Rebuild for flint 2.5.2 and ntl 9.3.0 * Thu Aug 27 2015 Jonathan Wakely - 1.6-17 - Rebuilt for Boost 1.59 * Wed Jul 29 2015 Fedora Release Engineering - 1.6-16 - Rebuilt for https://fedoraproject.org/wiki/Changes/F23Boost159 * Wed Jul 22 2015 David Tardon - 1.6-15 - rebuild for Boost 1.58 * Tue Jun 16 2015 Fedora Release Engineering - 1.6-14 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild * Mon May 18 2015 Jerry James - 1.6-13 - Rebuild for ntl 9.1.1 and cddlib-094h * Fri May 15 2015 Jerry James - 1.6-12 - Bump and rebuild * Sat May 9 2015 Jerry James - 1.6-11 - Rebuild for ntl 9.1.0 * Mon Feb 2 2015 Jerry James - 1.6-10 - Rebuild for ntl 8.1.2 * Mon Jan 26 2015 Petr Machata - 1.6-9 - Rebuild for boost 1.57.0 * Thu Jan 15 2015 Jerry James - 1.6-8 - Rebuild for ntl 8.1.0 - Fix the desktop file name * Wed Oct 29 2014 Jerry James - 1.6-7 - Rebuild for ntl 6.2.1 - Revert Apr 8 HTML creation timeout, now handled upstream - Revert use of -common subpkg; various arches timeout differently * Wed Sep 24 2014 Rex Dieter 1.6-6 - enable -common subpkg (to be more compatible with upstream packaging) * Fri Aug 15 2014 Fedora Release Engineering - 1.6-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild * Wed Jun 25 2014 Rex Dieter 1.6-4 - restore --build/--host configure options lost in 1.6 update, should help arm * Fri Jun 06 2014 Fedora Release Engineering - 1.6-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild * Fri May 23 2014 Petr Machata - 1.6-2 - Rebuild for boost 1.55.0 * Mon May 19 2014 Rex Dieter 1.6-1 - Macaulay2-1.6 (#1074594) - ExcludeArch: %%arm (#1099598) * Wed May 14 2014 Rex Dieter 1.5-8 - rebuild (gc) * Tue Apr 8 2014 Jerry James - 1.5-7 - Build for all arches - Increase HTML creation timeouts for slower processors, such as ARM - Add --build and --host invocations to configure to fix mismatched ARM names * Wed Apr 2 2014 Jerry James - 1.5-6 - Rebuild for ntl 6.1.0 * Fri Mar 21 2014 Jerry James - 1.5-5 - The normaliz patch was used; bring it back - Complete the removal of the system_normaliz variable - Link with RPM_LD_FLAGS - Due to use of a static library, explicitly link with -lflint * Fri Jan 24 2014 Rex Dieter - 1.5-5 - drop unused patches (4ti2, normalize) * Tue Jan 21 2014 Rex Dieter - 1.5-4 - utilize %%_libexecdir/Macaulay2/... for helper/system binaries - libdir: %%_libdir => %%_prefix/lib - -common subpkg option (not used yet) * Tue Jan 14 2014 Jerry James - 1.5-3 - Update normaliz interface for normaliz 2.8 and later * Tue Jul 30 2013 Petr Machata - 1.5-2 - Rebuild for boost 1.54.0 * Thu May 23 2013 Rex Dieter 1.5-1 - Release: 1 (using non-snapshot release tarball now) * Tue May 21 2013 Rex Dieter - 1.5-0.7.20130401 - update to 20130401 r15955 snapshot release - (Build)Requires: factory-gftables (see bug #965655) - refresh INFO_FILES content * Mon May 6 2013 Jerry James - 1.5-0.6.20130214 - Rebuild for m4ri 20130416 * Fri Feb 15 2013 Rex Dieter 1.5-0.5.20130214 - r15838 (20130214 snapshot) * Wed Feb 13 2013 Rex Dieter 1.5-0.4.20120807 - BR: doxygen-latex * Wed Feb 13 2013 Fedora Release Engineering - 1.5-0.3.20120807 - Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild * Tue Aug 07 2012 Rex Dieter 1.5-0.2.20120807 - 1.5 20120807 r15022 snapshot * Thu Jul 19 2012 Rex Dieter 1.4-9 - rebuild against (Singular's) libfac/factory 3.1.3 * Wed Jul 18 2012 Fedora Release Engineering - 1.4-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild * Tue Jul 03 2012 Rex Dieter 1.4-7 - rebuild (pari) * Sun Jul 1 2012 pcpa - 1.4-6 - Link to gmp not mpir. - Rebuild with pari 2.5. * Wed May 30 2012 Rex Dieter - 1.4-5 - License: GPLv2 or GPLv3 (#821036) - pkgconfig-style deps * Tue Feb 28 2012 Fedora Release Engineering - 1.4-4 - Rebuilt for c++ ABI breakage * Thu Jan 12 2012 Fedora Release Engineering - 1.4-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild * Fri Sep 30 2011 Rex Dieter 1.4-2 - rebuild (gdbm) * Thu May 26 2011 Rex Dieter 1.4-1 - 1.4 * Thu May 26 2011 Rex Dieter 1.3.1-9 - Typo in INFO_FILES (#708086) * Mon Feb 07 2011 Fedora Release Engineering - 1.3.1-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild * Wed Jun 30 2010 Rex Dieter - 1.3.1-7 - BR: cddlib-static (#609698) * Tue Mar 16 2010 Rex Dieter - 1.3.1-6 - rebuild (factory/libfac) * Tue Mar 16 2010 Mark Chappell - 1.3.1-5 - Run install-info on all of the .info files we installed - Re-enable the now functional ppc64 build * Wed Mar 10 2010 Mark Chappell - 1.3.1-4 - Add in missing Requires runtime dependancies * Wed Mar 10 2010 Mark Chappell - 1.3.1-3 - GPLv3/GPLv2 conflict, use compat-readline5 - bz#511299 * Tue Mar 09 2010 Mark Chappell - 1.3.1-2 - Replace DSO patch with one accepted upstream - Completely disable static linking * Wed Feb 24 2010 Mark Chappell - 1.3.1-1 - Upstream version increment - Remove unused patch - Remove patch applied upstream - Ensure consistent use of buildroot macro instead of RPM_BUILD_ROOT - Fix implicit linking DSO failure - Don't package empty .okay files which simply indicate test passes * Tue Dec 8 2009 Michael Schwendt - 1.2-7 - Explicitly BR factory-static and libfac-static in accordance with the Packaging Guidelines (factory-devel/libfac-devel are still static-only). * Tue Sep 22 2009 Rex Dieter - 1.2-6 - fixup/optimize scriplets * Fri Jul 24 2009 Fedora Release Engineering - 1.2-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild * Fri Apr 17 2009 Rex Dieter - 1.2-4 - rebuild for ntl-devel (shared) * Wed Feb 25 2009 Rex Dieter - 1.2-3 - BR: libfac-devel,factory-devel >= 3.1 - restore ExcludeArch: ppc64 (#253847) * Mon Feb 23 2009 Fedora Release Engineering - 1.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild * Fri Feb 13 2009 Rex Dieter 1.2-1 - Macaulay-1.2 * Thu Oct 02 2008 Rex Dieter 1.1-2 - respin (factory/libfac) * Tue Mar 11 2008 Rex Dieter 1.1-1 - Macaulay2-1.1 - Obsoletes/Provides: Macaulay2-common (upstream compatibility) - re-enable ppc64 (#253847) - IgnoreExampleErrors=true * Tue Feb 19 2008 Fedora Release Engineering - 0.9.95-10 - Autorebuild for GCC 4.3 * Tue Dec 18 2007 Rex Dieter 0.9.95-9 - Provides: macaulay2 - respin against new(er) factory,libfac,ntl * Wed Aug 22 2007 Rex Dieter 0.9.95-8 - ExcludeArch: ppc64 (#253847) * Tue Aug 21 2007 Rex Dieter 0.9.95-7 - BR: gawk * Tue Aug 21 2007 Rex Dieter 0.9.95-6 - gc-7.0 patches * Sat Aug 11 2007 Rex Dieter 0.9.95-5 - License: GPLv2 * Mon Jan 15 2007 Rex Dieter 0.9.95-4 - Ob/Pr: Macaulay2-doc, not -docs (#222609) * Sat Jan 06 2007 Rex Dieter 0.9.95-3 - re-enable ppc build (#201739) * Tue Jan 02 2007 Rex Dieter 0.9.95-2 - ./configure --disable-strip, for usable -debuginfo (#220893) * Mon Dec 18 2006 Rex Dieter 0.9.95-1 - Macaulay2-0.9.95 * Wed Nov 22 2006 Rex Dieter 0.9.20-0.5.20060808svn - .desktop Categories: -Application,Scientific,X-Fedora +ConsoleOnly * Tue Aug 29 2006 Rex Dieter 0.9.20-0.4.20060808svn - fc6 respin * Tue Aug 08 2006 Rex Dieter 0.9.20-0.3.20060808svn - ExcludeArch: ppc (bug #201739) - %%ghost (x)emacs site-lisp bits (using hints from fedora-rpmdevtools) * Tue Aug 08 2006 Rex Dieter 0.9.20-0.2.20060808svn - 20060808 snapshot * Mon Jul 24 2006 Rex Dieter 0.9.20-0.1.20060724svn - 2006-07-15-0.9.20 * Wed Jul 12 2006 Rex Dieter 0.9.10-0.6.20060710svn - 0.9.10 -* Mon Jul 10 2006 Rex Dieter 0.9.8-0.6.cvs20060327 - BR: ncurses-devel * Fri May 05 2006 Rex Dieter 0.9.8-0.4.cvs20060327 - 64bit patch (#188709) * Wed Apr 12 2006 Rex Dieter 0.9.8-0.3.cvs20060327 - omit x86_64, for now (#188709) * Tue Apr 11 2006 Rex Dieter 0.9.8-0.2.cvs20060327 - 0.9.8 (cvs, no tarball yet) - drop -doc subpkg (in main now) * Mon Apr 10 2006 Rex Dieter 0.9.2-22 - fix icon location (#188384) * Thu Mar 30 2006 Rex Dieter 0.9.2-21 - really disable %%check (fails on fc5+ anyway) * Fri Jan 20 2006 Rex Dieter 0.9.2-20 - .desktop: drop Category=Development - app icon: follow icon spec - drop -emacs subpkg (in main now) * Fri Sep 16 2005 Rex Dieter - 0.9.2-19 - disable 'make check' (fc5/buildsystem error), besides, we get a good consistency check when M2 builds all the doc examples. * Wed Sep 14 2005 Rex Dieter - 0.9.2-18 - rebuild against gc-6.6 * Thu May 26 2005 Michael Schwendt - 0.9.2-17 - rebuild (build system x86_64 repository access failed for 0.9.2-16) - fix build for GCC 4 (#156223) * Thu Apr 7 2005 Michael Schwendt - 0.9.2-15 - rebuilt * Mon Feb 21 2005 Rex Dieter 0:0.9.2-14 - x86_64 issues (%%_libdir -> %%_prefix/lib ) - remove desktop_file macro usage * Sat Oct 23 2004 Rex Dieter 0:0.9.2-0.fdr.13 - BR: time (again) - omit m2_dir/setup (not needed/wanted) * Mon Oct 18 2004 Rex Dieter 0:0.9.2-0.fdr.12 - actually *apply* gcc34 patch this time. * Mon Oct 18 2004 Rex Dieter 0:0.9.2-0.fdr.11 - gcc34 patch * Fri Oct 1 2004 Rex Dieter 0:0.9.2-0.fdr.10 - explicit BR versions for gc-devel, libfac-devel, factory-devel * Tue Aug 10 2004 Rex Dieter 0:0.9.2-0.fdr.9 - BR: time * Thu Jun 03 2004 Rex Dieter 0:0.9.2-0.fdr.8 - .desktop: remove Terminaloptions to be desktop agnostic - .desktop: Categories += Education;Math;Development (Devel only added so it shows *somewhere* in gnome menus) * Tue Jun 01 2004 Rex Dieter 0:0.9.2-0.fdr.7 - disable default 'make check' (util/screen fails on fc2) * Tue Mar 30 2004 Rex Dieter 0:0.9.2-0.fdr.6 - desktop-file is now on by default - use separate (not inline) .desktop file * Mon Jan 05 2004 Rex Dieter 0:0.9.2-0.fdr.5 - fix BuildRequires: desktop-file-utils to satisfy rpmlint. - put emacs files in emacs subdir too (to follow supplied docs) - *really* nuke .cvsignore files - fix desktop-file-install --add-cateagories usage * Tue Dec 23 2003 Rex Dieter 0:0.9.2-0.fdr.4 - -emacs: use %%defattr - -emacs: fix M2-init.el * Mon Nov 17 2003 Rex Dieter 0:0.9.2-0.fdr.3 - update/simplify macros - desktop_file support. - emacs subpkg. - relax Req's on subpkgs to just: Requires: %%name = %%epoch:%%version - use non-versioned BuildRequires - remove redundant BuildRequires: gmp-devel - remove gc patch, no longer needed. - delete/not-package a bunch of unuseful files. - use --disable-strip when debug_package is in use. * Thu Nov 13 2003 Rex Dieter 0:0.9.2-0.fdr.2 - no longer explictly Requires: emacs * Wed Nov 05 2003 Rex Dieter 0:0.9.2-0.fdr.1 - missing Epoch: 0 * Fri Sep 12 2003 Rex Dieter 0.9.2-0.fdr.0 - fedora'ize