Warning: Permanently added '54.221.160.241' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8133125-fedora-41-x86_64 --chroot fedora-41-x86_64 Version: 1.0 PID: 7612 Logging PID: 7613 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8133125, 'buildroot_pkgs': [], 'chroot': 'fedora-41-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '13607f28da99dba6569a2494ed6acff4dec23a8a', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/pytest-8.2.2/snakemake', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'snakemake', 'package_version': '8.18.2-4', 'project_dirname': 'pytest-8.2.2', 'project_name': 'pytest-8.2.2', 'project_owner': 'thrnciar', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/thrnciar/pytest-8.2.2/fedora-41-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'thrnciar/pytest-8.2.2--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '8133125-fedora-41-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/thrnciar/pytest-8.2.2/snakemake /var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/pytest-8.2.2/snakemake', '/var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake'... Running: git checkout 13607f28da99dba6569a2494ed6acff4dec23a8a -- cmd: ['git', 'checkout', '13607f28da99dba6569a2494ed6acff4dec23a8a', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake rc: 0 stdout: stderr: Note: switching to '13607f28da99dba6569a2494ed6acff4dec23a8a'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 13607f2 automatic import of snakemake Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading snakemake-8.18.2.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o snakemake-8.18.2.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/thrnciar/pytest-8.2.2/snakemake/snakemake-8.18.2.tar.gz/md5/3d16041877d242096026870afc84978e/snakemake-8.18.2.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 8464k 100 8464k 0 0 25.0M 0 --:--:-- --:--:-- --:--:-- 25.0M INFO: Reading stdout from command: md5sum snakemake-8.18.2.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728851908.372295 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728851908.372295 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake/snakemake.spec) Config(fedora-41-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1728851908.372295/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Copy content of container registry.fedoraproject.org/fedora:41 to /var/lib/mock/fedora-41-x86_64-bootstrap-1728851908.372295/root INFO: Checking that registry.fedoraproject.org/fedora:41 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:41 with podman image mount INFO: image registry.fedoraproject.org/fedora:41 as /var/lib/containers/storage/overlay/d23cc7422023e69d73434f3f4e31ddb77e4eb85832953b01904f7d75f6d8fcb5/merged INFO: umounting image registry.fedoraproject.org/fedora:41 (/var/lib/containers/storage/overlay/d23cc7422023e69d73434f3f4e31ddb77e4eb85832953b01904f7d75f6d8fcb5/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1728851908.372295/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc41.x86_64 dnf5-plugins-5.2.6.2-1.fc41.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 392.1 KiB/s | 31.8 KiB | 00m00s fedora 100% | 54.1 MiB/s | 35.4 MiB | 00m01s Copr repository 100% | 41.7 MiB/s | 1.6 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.32-1.fc41 fedora 8.2 MiB bzip2 x86_64 1.0.8-19.fc41 fedora 95.7 KiB coreutils x86_64 9.5-10.fc41 fedora 5.6 MiB cpio x86_64 2.15-2.fc41 fedora 1.1 MiB diffutils x86_64 3.10-8.fc41 fedora 1.6 MiB fedora-release-common noarch 41-0.21 fedora 19.4 KiB findutils x86_64 1:4.10.0-4.fc41 fedora 1.8 MiB gawk x86_64 5.3.0-4.fc41 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.40-3.fc41 fedora 0.0 B grep x86_64 3.11-9.fc41 fedora 1.0 MiB gzip x86_64 1.13-2.fc41 fedora 389.0 KiB info x86_64 7.1-3.fc41 fedora 361.8 KiB patch x86_64 2.7.6-25.fc41 fedora 266.7 KiB redhat-rpm-config noarch 293-1.fc41 fedora 183.5 KiB rpm-build x86_64 4.19.94-1.fc41 fedora 194.3 KiB sed x86_64 4.9-3.fc41 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-12.fc41 fedora 4.1 MiB tar x86_64 2:1.35-4.fc41 fedora 2.9 MiB unzip x86_64 6.0-64.fc41 fedora 386.8 KiB util-linux x86_64 2.40.2-4.fc41 fedora 3.7 MiB which x86_64 2.21-42.fc41 fedora 80.2 KiB xz x86_64 1:5.6.2-2.fc41 fedora 1.2 MiB Installing dependencies: add-determinism x86_64 0.3.6-1.fc41 fedora 2.2 MiB alternatives x86_64 1.30-1.fc41 fedora 66.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs x86_64 4.0.2-1.fc41 fedora 331.3 KiB authselect x86_64 1.5.0-8.fc41 fedora 157.6 KiB authselect-libs x86_64 1.5.0-8.fc41 fedora 822.2 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils x86_64 2.43.1-2.fc41 fedora 27.5 MiB build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B bzip2-libs x86_64 1.0.8-19.fc41 fedora 80.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc41 fedora 2.4 MiB coreutils-common x86_64 9.5-10.fc41 fedora 11.2 MiB cracklib x86_64 2.9.11-6.fc41 fedora 238.9 KiB crypto-policies noarch 20240828-1.git5f66e81.fc41 copr_base 136.9 KiB curl x86_64 8.9.1-2.fc41 fedora 796.2 KiB cyrus-sasl-lib x86_64 2.1.28-27.fc41 fedora 2.3 MiB debugedit x86_64 5.0-17.fc41 fedora 199.3 KiB dwz x86_64 0.15-8.fc41 fedora 298.9 KiB ed x86_64 1.20.2-2.fc41 fedora 146.9 KiB efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB elfutils x86_64 0.191-8.fc41 fedora 2.6 MiB elfutils-debuginfod-client x86_64 0.191-8.fc41 fedora 64.9 KiB elfutils-default-yama-scope noarch 0.191-8.fc41 fedora 1.8 KiB elfutils-libelf x86_64 0.191-8.fc41 fedora 1.2 MiB elfutils-libs x86_64 0.191-8.fc41 fedora 646.2 KiB fedora-gpg-keys noarch 41-0.5 fedora 126.4 KiB fedora-release noarch 41-0.21 fedora 0.0 B fedora-release-identity-basic noarch 41-0.21 fedora 684.0 B fedora-repos noarch 41-0.5 fedora 4.9 KiB file x86_64 5.45-7.fc41 fedora 103.5 KiB file-libs x86_64 5.45-7.fc41 fedora 9.9 MiB filesystem x86_64 3.18-23.fc41 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc41 copr_base 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal x86_64 15.1-1.fc41 fedora 13.0 MiB gdbm x86_64 1:1.23-7.fc41 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-7.fc41 fedora 121.9 KiB ghc-srpm-macros noarch 1.9.1-2.fc41 fedora 747.0 B glibc x86_64 2.40-3.fc41 fedora 6.7 MiB glibc-common x86_64 2.40-3.fc41 fedora 1.0 MiB glibc-gconv-extra x86_64 2.40-3.fc41 fedora 8.0 MiB gmp x86_64 1:6.3.0-2.fc41 fedora 811.4 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson x86_64 2.13.1-10.fc41 fedora 88.3 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-4.fc41 fedora 54.4 KiB krb5-libs x86_64 1.21.3-2.fc41 fedora 2.3 MiB libacl x86_64 2.3.2-2.fc41 fedora 40.0 KiB libarchive x86_64 3.7.4-3.fc41 fedora 922.6 KiB libattr x86_64 2.5.2-4.fc41 fedora 28.5 KiB libblkid x86_64 2.40.2-4.fc41 fedora 258.5 KiB libbrotli x86_64 1.1.0-5.fc41 fedora 837.6 KiB libcap x86_64 2.70-4.fc41 fedora 220.2 KiB libcap-ng x86_64 0.8.5-3.fc41 fedora 69.2 KiB libcom_err x86_64 1.47.1-3.fc41 fedora 67.2 KiB libcurl x86_64 8.9.1-2.fc41 fedora 818.1 KiB libeconf x86_64 0.6.2-3.fc41 fedora 58.0 KiB libevent x86_64 2.1.12-14.fc41 fedora 895.7 KiB libfdisk x86_64 2.40.2-4.fc41 fedora 362.9 KiB libffi x86_64 3.4.6-3.fc41 fedora 86.4 KiB libgcc x86_64 14.2.1-3.fc41 fedora 274.6 KiB libgomp x86_64 14.2.1-3.fc41 fedora 523.5 KiB libidn2 x86_64 2.3.7-2.fc41 fedora 329.1 KiB libmount x86_64 2.40.2-4.fc41 fedora 351.8 KiB libnghttp2 x86_64 1.62.1-2.fc41 fedora 166.1 KiB libnsl2 x86_64 2.0.1-2.fc41 fedora 57.9 KiB libpkgconf x86_64 2.3.0-1.fc41 fedora 78.2 KiB libpsl x86_64 0.21.5-4.fc41 fedora 80.5 KiB libpwquality x86_64 1.4.5-11.fc41 fedora 417.8 KiB libselinux x86_64 3.7-5.fc41 fedora 181.0 KiB libsemanage x86_64 3.7-2.fc41 fedora 293.5 KiB libsepol x86_64 3.7-2.fc41 fedora 817.8 KiB libsmartcols x86_64 2.40.2-4.fc41 fedora 180.4 KiB libssh x86_64 0.10.6-8.fc41 fedora 513.3 KiB libssh-config noarch 0.10.6-8.fc41 fedora 277.0 B libstdc++ x86_64 14.2.1-3.fc41 fedora 2.8 MiB libtasn1 x86_64 4.19.0-9.fc41 fedora 175.7 KiB libtirpc x86_64 1.3.5-0.fc41 fedora 202.7 KiB libtool-ltdl x86_64 2.4.7-12.fc41 fedora 66.2 KiB libunistring x86_64 1.1-8.fc41 fedora 1.7 MiB libutempter x86_64 1.2.1-15.fc41 fedora 57.7 KiB libuuid x86_64 2.40.2-4.fc41 fedora 37.5 KiB libverto x86_64 0.3.2-9.fc41 fedora 29.5 KiB libxcrypt x86_64 4.4.36-7.fc41 fedora 266.8 KiB libxml2 x86_64 2.12.8-2.fc41 fedora 1.7 MiB libzstd x86_64 1.5.6-2.fc41 fedora 795.9 KiB lua-libs x86_64 5.4.6-6.fc41 fedora 285.0 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs x86_64 1.10.0-1.fc41 fedora 145.5 KiB mpfr x86_64 4.2.1-5.fc41 fedora 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 fedora 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap x86_64 2.6.8-5.fc41 fedora 644.2 KiB openssl-libs x86_64 1:3.2.2-9.fc41 fedora 7.8 MiB p11-kit x86_64 0.25.5-3.fc41 fedora 2.2 MiB p11-kit-trust x86_64 0.25.5-3.fc41 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam x86_64 1.6.1-5.fc41 fedora 1.8 MiB pam-libs x86_64 1.6.1-5.fc41 fedora 139.0 KiB pcre2 x86_64 10.44-1.fc41.1 fedora 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf x86_64 2.3.0-1.fc41 fedora 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc41 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc41 fedora 989.0 B popt x86_64 1.19-7.fc41 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc41 copr_base 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc41 fedora 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 fedora 456.0 B readline x86_64 8.2-10.fc41 fedora 493.2 KiB rpm x86_64 4.19.94-1.fc41 fedora 3.1 MiB rpm-build-libs x86_64 4.19.94-1.fc41 fedora 206.7 KiB rpm-libs x86_64 4.19.94-1.fc41 fedora 721.9 KiB rpm-sequoia x86_64 1.7.0-2.fc41 fedora 2.4 MiB rust-srpm-macros noarch 26.3-3.fc41 copr_base 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc41 fedora 1.4 MiB systemd-libs x86_64 256.7-1.fc41 copr_base 2.0 MiB util-linux-core x86_64 2.40.2-4.fc41 fedora 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc41 fedora 88.4 KiB xz-libs x86_64 1:5.6.2-2.fc41 fedora 214.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip x86_64 3.0-41.fc41 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc41 fedora 134.0 KiB zstd x86_64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation, 180 MiB extra will be used (install 180 MiB, remove 0 B). [ 1/153] bzip2-0:1.0.8-19.fc41.x86_64 100% | 5.1 MiB/s | 52.5 KiB | 00m00s [ 2/153] coreutils-0:9.5-10.fc41.x86_6 100% | 52.4 MiB/s | 1.1 MiB | 00m00s [ 3/153] cpio-0:2.15-2.fc41.x86_64 100% | 25.9 MiB/s | 291.8 KiB | 00m00s [ 4/153] bash-0:5.2.32-1.fc41.x86_64 100% | 64.5 MiB/s | 1.8 MiB | 00m00s [ 5/153] fedora-release-common-0:41-0. 100% | 3.7 MiB/s | 22.8 KiB | 00m00s [ 6/153] glibc-minimal-langpack-0:2.40 100% | 40.4 MiB/s | 124.0 KiB | 00m00s [ 7/153] findutils-1:4.10.0-4.fc41.x86 100% | 107.1 MiB/s | 548.5 KiB | 00m00s [ 8/153] diffutils-0:3.10-8.fc41.x86_6 100% | 28.3 MiB/s | 405.4 KiB | 00m00s [ 9/153] gzip-0:1.13-2.fc41.x86_64 100% | 55.4 MiB/s | 170.2 KiB | 00m00s [ 10/153] grep-0:3.11-9.fc41.x86_64 100% | 58.5 MiB/s | 299.7 KiB | 00m00s [ 11/153] patch-0:2.7.6-25.fc41.x86_64 100% | 63.9 MiB/s | 131.0 KiB | 00m00s [ 12/153] info-0:7.1-3.fc41.x86_64 100% | 35.6 MiB/s | 182.5 KiB | 00m00s [ 13/153] redhat-rpm-config-0:293-1.fc4 100% | 26.7 MiB/s | 82.0 KiB | 00m00s [ 14/153] rpm-build-0:4.19.94-1.fc41.x8 100% | 20.2 MiB/s | 82.9 KiB | 00m00s [ 15/153] sed-0:4.9-3.fc41.x86_64 100% | 62.1 MiB/s | 317.7 KiB | 00m00s [ 16/153] unzip-0:6.0-64.fc41.x86_64 100% | 60.2 MiB/s | 184.9 KiB | 00m00s [ 17/153] shadow-utils-2:4.15.1-12.fc41 100% | 132.0 MiB/s | 1.3 MiB | 00m00s [ 18/153] tar-2:1.35-4.fc41.x86_64 100% | 84.1 MiB/s | 860.7 KiB | 00m00s [ 19/153] which-0:2.21-42.fc41.x86_64 100% | 6.8 MiB/s | 41.6 KiB | 00m00s [ 20/153] xz-1:5.6.2-2.fc41.x86_64 100% | 92.1 MiB/s | 471.5 KiB | 00m00s [ 21/153] gawk-0:5.3.0-4.fc41.x86_64 100% | 133.9 MiB/s | 1.1 MiB | 00m00s [ 22/153] util-linux-0:2.40.2-4.fc41.x8 100% | 150.6 MiB/s | 1.2 MiB | 00m00s [ 23/153] filesystem-0:3.18-23.fc41.x86 100% | 120.8 MiB/s | 1.1 MiB | 00m00s [ 24/153] ncurses-libs-0:6.5-2.20240629 100% | 108.7 MiB/s | 334.0 KiB | 00m00s [ 25/153] bzip2-libs-0:1.0.8-19.fc41.x8 100% | 8.0 MiB/s | 41.1 KiB | 00m00s [ 26/153] glibc-0:2.40-3.fc41.x86_64 100% | 172.1 MiB/s | 2.2 MiB | 00m00s [ 27/153] gmp-1:6.3.0-2.fc41.x86_64 100% | 51.8 MiB/s | 318.0 KiB | 00m00s [ 28/153] libacl-0:2.3.2-2.fc41.x86_64 100% | 4.8 MiB/s | 24.5 KiB | 00m00s [ 29/153] libattr-0:2.5.2-4.fc41.x86_64 100% | 5.9 MiB/s | 18.2 KiB | 00m00s [ 30/153] libcap-0:2.70-4.fc41.x86_64 100% | 28.2 MiB/s | 86.7 KiB | 00m00s [ 31/153] libselinux-0:3.7-5.fc41.x86_6 100% | 28.6 MiB/s | 87.8 KiB | 00m00s [ 32/153] coreutils-common-0:9.5-10.fc4 100% | 106.1 MiB/s | 2.1 MiB | 00m00s [ 33/153] fedora-repos-0:41-0.5.noarch 100% | 3.0 MiB/s | 9.2 KiB | 00m00s [ 34/153] glibc-common-0:2.40-3.fc41.x8 100% | 57.5 MiB/s | 412.3 KiB | 00m00s [ 35/153] pcre2-0:10.44-1.fc41.1.x86_64 100% | 33.9 MiB/s | 243.1 KiB | 00m00s [ 36/153] openssl-libs-1:3.2.2-9.fc41.x 100% | 165.1 MiB/s | 2.3 MiB | 00m00s [ 37/153] ansible-srpm-macros-0:1-16.fc 100% | 6.8 MiB/s | 20.8 KiB | 00m00s [ 38/153] ed-0:1.20.2-2.fc41.x86_64 100% | 20.0 MiB/s | 81.8 KiB | 00m00s [ 39/153] build-reproducibility-srpm-ma 100% | 5.2 MiB/s | 10.6 KiB | 00m00s [ 40/153] efi-srpm-macros-0:5-12.fc41.n 100% | 10.9 MiB/s | 22.4 KiB | 00m00s [ 41/153] dwz-0:0.15-8.fc41.x86_64 100% | 45.2 MiB/s | 138.9 KiB | 00m00s [ 42/153] file-0:5.45-7.fc41.x86_64 100% | 16.0 MiB/s | 49.1 KiB | 00m00s [ 43/153] fonts-srpm-macros-1:2.0.5-17. 100% | 8.8 MiB/s | 27.0 KiB | 00m00s [ 44/153] fpc-srpm-macros-0:1.3-13.fc41 100% | 2.6 MiB/s | 8.0 KiB | 00m00s [ 45/153] ghc-srpm-macros-0:1.9.1-2.fc4 100% | 2.2 MiB/s | 9.1 KiB | 00m00s [ 46/153] gnat-srpm-macros-0:6-6.fc41.n 100% | 2.2 MiB/s | 9.0 KiB | 00m00s [ 47/153] go-srpm-macros-0:3.6.0-3.fc41 100% | 6.8 MiB/s | 28.0 KiB | 00m00s [ 48/153] kernel-srpm-macros-0:1.0-24.f 100% | 4.8 MiB/s | 9.9 KiB | 00m00s [ 49/153] lua-srpm-macros-0:1-14.fc41.n 100% | 8.7 MiB/s | 8.9 KiB | 00m00s [ 50/153] ocaml-srpm-macros-0:10-3.fc41 100% | 4.5 MiB/s | 9.2 KiB | 00m00s [ 51/153] openblas-srpm-macros-0:2-18.f 100% | 3.8 MiB/s | 7.7 KiB | 00m00s [ 52/153] package-notes-srpm-macros-0:0 100% | 4.8 MiB/s | 9.8 KiB | 00m00s [ 53/153] perl-srpm-macros-0:1-56.fc41. 100% | 2.8 MiB/s | 8.5 KiB | 00m00s [ 54/153] python-srpm-macros-0:3.13-3.f 100% | 7.7 MiB/s | 23.7 KiB | 00m00s [ 55/153] qt5-srpm-macros-0:5.15.15-1.f 100% | 4.3 MiB/s | 8.9 KiB | 00m00s [ 56/153] qt6-srpm-macros-0:6.7.2-3.fc4 100% | 4.5 MiB/s | 9.1 KiB | 00m00s [ 57/153] zig-srpm-macros-0:1-3.fc41.no 100% | 4.0 MiB/s | 8.1 KiB | 00m00s [ 58/153] rpm-0:4.19.94-1.fc41.x86_64 100% | 89.1 MiB/s | 547.6 KiB | 00m00s [ 59/153] zip-0:3.0-41.fc41.x86_64 100% | 51.7 MiB/s | 264.8 KiB | 00m00s [ 60/153] debugedit-0:5.0-17.fc41.x86_6 100% | 19.6 MiB/s | 80.1 KiB | 00m00s [ 61/153] elfutils-libelf-0:0.191-8.fc4 100% | 40.5 MiB/s | 207.6 KiB | 00m00s [ 62/153] elfutils-0:0.191-8.fc41.x86_6 100% | 86.2 MiB/s | 529.4 KiB | 00m00s [ 63/153] libarchive-0:3.7.4-3.fc41.x86 100% | 66.6 MiB/s | 409.2 KiB | 00m00s [ 64/153] popt-0:1.19-7.fc41.x86_64 100% | 21.5 MiB/s | 65.9 KiB | 00m00s [ 65/153] readline-0:8.2-10.fc41.x86_64 100% | 69.4 MiB/s | 213.2 KiB | 00m00s [ 66/153] rpm-build-libs-0:4.19.94-1.fc 100% | 32.3 MiB/s | 99.1 KiB | 00m00s [ 67/153] rpm-libs-0:4.19.94-1.fc41.x86 100% | 75.6 MiB/s | 309.5 KiB | 00m00s [ 68/153] zstd-0:1.5.6-2.fc41.x86_64 100% | 94.0 MiB/s | 481.5 KiB | 00m00s [ 69/153] audit-libs-0:4.0.2-1.fc41.x86 100% | 30.8 MiB/s | 126.2 KiB | 00m00s [ 70/153] libsemanage-0:3.7-2.fc41.x86_ 100% | 56.8 MiB/s | 116.3 KiB | 00m00s [ 71/153] libeconf-0:0.6.2-3.fc41.x86_6 100% | 7.9 MiB/s | 32.2 KiB | 00m00s [ 72/153] libxcrypt-0:4.4.36-7.fc41.x86 100% | 57.9 MiB/s | 118.5 KiB | 00m00s [ 73/153] setup-0:2.15.0-5.fc41.noarch 100% | 75.4 MiB/s | 154.4 KiB | 00m00s [ 74/153] xz-libs-1:5.6.2-2.fc41.x86_64 100% | 27.3 MiB/s | 111.8 KiB | 00m00s [ 75/153] pam-libs-0:1.6.1-5.fc41.x86_6 100% | 9.3 MiB/s | 57.3 KiB | 00m00s [ 76/153] mpfr-0:4.2.1-5.fc41.x86_64 100% | 67.6 MiB/s | 346.3 KiB | 00m00s [ 77/153] libcap-ng-0:0.8.5-3.fc41.x86_ 100% | 10.6 MiB/s | 32.6 KiB | 00m00s [ 78/153] libblkid-0:2.40.2-4.fc41.x86_ 100% | 20.3 MiB/s | 124.7 KiB | 00m00s [ 79/153] libfdisk-0:2.40.2-4.fc41.x86_ 100% | 52.0 MiB/s | 159.8 KiB | 00m00s [ 80/153] libsmartcols-0:2.40.2-4.fc41. 100% | 27.3 MiB/s | 83.7 KiB | 00m00s [ 81/153] libmount-0:2.40.2-4.fc41.x86_ 100% | 38.0 MiB/s | 155.5 KiB | 00m00s [ 82/153] libutempter-0:1.2.1-15.fc41.x 100% | 6.5 MiB/s | 26.6 KiB | 00m00s [ 83/153] libuuid-0:2.40.2-4.fc41.x86_6 100% | 14.2 MiB/s | 29.1 KiB | 00m00s [ 84/153] zlib-ng-compat-0:2.1.7-3.fc41 100% | 19.0 MiB/s | 77.7 KiB | 00m00s [ 85/153] util-linux-core-0:2.40.2-4.fc 100% | 87.4 MiB/s | 537.2 KiB | 00m00s [ 86/153] basesystem-0:11-21.fc41.noarc 100% | 1.8 MiB/s | 7.4 KiB | 00m00s [ 87/153] glibc-gconv-extra-0:2.40-3.fc 100% | 153.9 MiB/s | 1.7 MiB | 00m00s [ 88/153] libgcc-0:14.2.1-3.fc41.x86_64 100% | 18.6 MiB/s | 133.3 KiB | 00m00s [ 89/153] ncurses-base-0:6.5-2.20240629 100% | 21.6 MiB/s | 88.3 KiB | 00m00s [ 90/153] fedora-gpg-keys-0:41-0.5.noar 100% | 43.5 MiB/s | 133.6 KiB | 00m00s [ 91/153] libsepol-0:3.7-2.fc41.x86_64 100% | 66.8 MiB/s | 342.2 KiB | 00m00s [ 92/153] pcre2-syntax-0:10.44-1.fc41.1 100% | 29.3 MiB/s | 149.9 KiB | 00m00s [ 93/153] ca-certificates-0:2024.2.69_v 100% | 77.3 MiB/s | 871.2 KiB | 00m00s [ 94/153] file-libs-0:5.45-7.fc41.x86_6 100% | 148.8 MiB/s | 762.0 KiB | 00m00s [ 95/153] add-determinism-0:0.3.6-1.fc4 100% | 75.6 MiB/s | 851.8 KiB | 00m00s [ 96/153] curl-0:8.9.1-2.fc41.x86_64 100% | 61.6 MiB/s | 315.1 KiB | 00m00s [ 97/153] elfutils-debuginfod-client-0: 100% | 12.1 MiB/s | 37.2 KiB | 00m00s [ 98/153] elfutils-libs-0:0.191-8.fc41. 100% | 50.3 MiB/s | 257.5 KiB | 00m00s [ 99/153] libstdc++-0:14.2.1-3.fc41.x86 100% | 108.4 MiB/s | 887.8 KiB | 00m00s [100/153] libzstd-0:1.5.6-2.fc41.x86_64 100% | 50.5 MiB/s | 310.3 KiB | 00m00s [101/153] libxml2-0:2.12.8-2.fc41.x86_6 100% | 83.9 MiB/s | 687.3 KiB | 00m00s [102/153] lz4-libs-0:1.10.0-1.fc41.x86_ 100% | 17.3 MiB/s | 70.7 KiB | 00m00s [103/153] libgomp-0:14.2.1-3.fc41.x86_6 100% | 57.6 MiB/s | 354.1 KiB | 00m00s [104/153] lua-libs-0:5.4.6-6.fc41.x86_6 100% | 32.2 MiB/s | 132.0 KiB | 00m00s [105/153] rpm-sequoia-0:1.7.0-2.fc41.x8 100% | 108.9 MiB/s | 892.5 KiB | 00m00s [106/153] elfutils-default-yama-scope-0 100% | 3.0 MiB/s | 12.3 KiB | 00m00s [107/153] sqlite-libs-0:3.46.1-1.fc41.x 100% | 116.0 MiB/s | 712.7 KiB | 00m00s [108/153] authselect-libs-0:1.5.0-8.fc4 100% | 71.0 MiB/s | 218.0 KiB | 00m00s [109/153] pam-0:1.6.1-5.fc41.x86_64 100% | 108.2 MiB/s | 554.0 KiB | 00m00s [110/153] authselect-0:1.5.0-8.fc41.x86 100% | 35.6 MiB/s | 145.8 KiB | 00m00s [111/153] gdbm-libs-1:1.23-7.fc41.x86_6 100% | 18.3 MiB/s | 56.3 KiB | 00m00s [112/153] libnsl2-0:2.0.1-2.fc41.x86_64 100% | 14.5 MiB/s | 29.6 KiB | 00m00s [113/153] libtirpc-0:1.3.5-0.fc41.x86_6 100% | 46.0 MiB/s | 94.2 KiB | 00m00s [114/153] libpwquality-0:1.4.5-11.fc41. 100% | 38.8 MiB/s | 119.0 KiB | 00m00s [115/153] systemd-libs-0:256.7-1.fc41.x 100% | 42.0 MiB/s | 731.9 KiB | 00m00s [116/153] cracklib-0:2.9.11-6.fc41.x86_ 100% | 30.0 MiB/s | 92.1 KiB | 00m00s [117/153] keyutils-libs-0:1.6.3-4.fc41. 100% | 15.5 MiB/s | 31.6 KiB | 00m00s [118/153] krb5-libs-0:1.21.3-2.fc41.x86 100% | 123.3 MiB/s | 757.4 KiB | 00m00s [119/153] libcom_err-0:1.47.1-3.fc41.x8 100% | 5.2 MiB/s | 26.4 KiB | 00m00s [120/153] libverto-0:0.3.2-9.fc41.x86_6 100% | 6.7 MiB/s | 20.7 KiB | 00m00s [121/153] alternatives-0:1.30-1.fc41.x8 100% | 10.4 MiB/s | 42.5 KiB | 00m00s [122/153] jansson-0:2.13.1-10.fc41.x86_ 100% | 7.2 MiB/s | 44.4 KiB | 00m00s [123/153] pkgconf-0:2.3.0-1.fc41.x86_64 100% | 14.7 MiB/s | 45.2 KiB | 00m00s [124/153] pkgconf-m4-0:2.3.0-1.fc41.noa 100% | 4.7 MiB/s | 14.3 KiB | 00m00s [125/153] binutils-0:2.43.1-2.fc41.x86_ 100% | 307.2 MiB/s | 6.5 MiB | 00m00s [126/153] libpkgconf-0:2.3.0-1.fc41.x86 100% | 6.3 MiB/s | 38.5 KiB | 00m00s [127/153] pyproject-srpm-macros-0:1.15. 100% | 4.5 MiB/s | 13.9 KiB | 00m00s [128/153] pkgconf-pkg-config-0:2.3.0-1. 100% | 500.5 KiB/s | 10.0 KiB | 00m00s [129/153] forge-srpm-macros-0:0.4.0-1.f 100% | 4.0 MiB/s | 20.3 KiB | 00m00s [130/153] rust-srpm-macros-0:26.3-3.fc4 100% | 6.2 MiB/s | 12.7 KiB | 00m00s [131/153] gdbm-1:1.23-7.fc41.x86_64 100% | 37.1 MiB/s | 151.8 KiB | 00m00s [132/153] crypto-policies-0:20240828-1. 100% | 35.6 MiB/s | 72.9 KiB | 00m00s [133/153] libffi-0:3.4.6-3.fc41.x86_64 100% | 19.5 MiB/s | 39.9 KiB | 00m00s [134/153] libtasn1-0:4.19.0-9.fc41.x86_ 100% | 24.2 MiB/s | 74.2 KiB | 00m00s [135/153] p11-kit-0:0.25.5-3.fc41.x86_6 100% | 119.9 MiB/s | 490.9 KiB | 00m00s [136/153] p11-kit-trust-0:0.25.5-3.fc41 100% | 32.3 MiB/s | 132.1 KiB | 00m00s [137/153] fedora-release-0:41-0.21.noar 100% | 2.9 MiB/s | 12.1 KiB | 00m00s [138/153] xxhash-libs-0:0.8.2-4.fc41.x8 100% | 9.0 MiB/s | 36.8 KiB | 00m00s [139/153] fedora-release-identity-basic 100% | 3.1 MiB/s | 12.8 KiB | 00m00s [140/153] libcurl-0:8.9.1-2.fc41.x86_64 100% | 88.3 MiB/s | 361.9 KiB | 00m00s [141/153] libbrotli-0:1.1.0-5.fc41.x86_ 100% | 55.4 MiB/s | 340.5 KiB | 00m00s [142/153] libidn2-0:2.3.7-2.fc41.x86_64 100% | 23.1 MiB/s | 118.4 KiB | 00m00s [143/153] libnghttp2-0:1.62.1-2.fc41.x8 100% | 18.7 MiB/s | 76.6 KiB | 00m00s [144/153] libpsl-0:0.21.5-4.fc41.x86_64 100% | 20.9 MiB/s | 64.1 KiB | 00m00s [145/153] libssh-0:0.10.6-8.fc41.x86_64 100% | 68.9 MiB/s | 211.8 KiB | 00m00s [146/153] libunistring-0:1.1-8.fc41.x86 100% | 177.4 MiB/s | 544.8 KiB | 00m00s [147/153] openldap-0:2.6.8-5.fc41.x86_6 100% | 35.7 MiB/s | 255.6 KiB | 00m00s [148/153] gdb-minimal-0:15.1-1.fc41.x86 100% | 139.1 MiB/s | 4.3 MiB | 00m00s [149/153] libssh-config-0:0.10.6-8.fc41 100% | 1.8 MiB/s | 9.2 KiB | 00m00s [150/153] publicsuffix-list-dafsa-0:202 100% | 6.3 MiB/s | 58.3 KiB | 00m00s [151/153] libevent-0:2.1.12-14.fc41.x86 100% | 62.9 MiB/s | 257.5 KiB | 00m00s [152/153] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 129.4 MiB/s | 794.9 KiB | 00m00s [153/153] libtool-ltdl-0:2.4.7-12.fc41. 100% | 11.6 MiB/s | 35.6 KiB | 00m00s -------------------------------------------------------------------------------- [153/153] Total 100% | 154.2 MiB/s | 53.2 MiB | 00m00s Running transaction Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/155] Verify package files 100% | 938.0 B/s | 153.0 B | 00m00s [ 2/155] Prepare transaction 100% | 4.7 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-3. 100% | 269.8 MiB/s | 276.3 KiB | 00m00s [ 4/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/155] Installing publicsuffix-list- 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 6/155] Installing fedora-release-ide 100% | 0.0 B/s | 940.0 B | 00m00s [ 7/155] Installing fedora-gpg-keys-0: 100% | 56.1 MiB/s | 172.2 KiB | 00m00s [ 8/155] Installing fedora-repos-0:41- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 9/155] Installing fedora-release-com 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [ 10/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 11/155] Installing setup-0:2.15.0-5.f 100% | 64.5 MiB/s | 726.1 KiB | 00m00s [ 12/155] Installing filesystem-0:3.18- 100% | 3.8 MiB/s | 212.5 KiB | 00m00s [ 13/155] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 14/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 15/155] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 16/155] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB | 00m00s [ 17/155] Installing ncurses-base-0:6.5 100% | 114.5 MiB/s | 351.7 KiB | 00m00s [ 18/155] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 19/155] Installing ncurses-libs-0:6.5 100% | 239.7 MiB/s | 981.8 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 20/155] Installing glibc-0:2.40-3.fc4 100% | 267.1 MiB/s | 6.7 MiB | 00m00s [ 21/155] Installing bash-0:5.2.32-1.fc 100% | 453.8 MiB/s | 8.2 MiB | 00m00s [ 22/155] Installing glibc-common-0:2.4 100% | 209.4 MiB/s | 1.0 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 23/155] Installing glibc-gconv-extra- 100% | 289.3 MiB/s | 8.1 MiB | 00m00s [ 24/155] Installing zlib-ng-compat-0:2 100% | 131.6 MiB/s | 134.8 KiB | 00m00s [ 25/155] Installing bzip2-libs-0:1.0.8 100% | 0.0 B/s | 81.8 KiB | 00m00s [ 26/155] Installing xz-libs-1:5.6.2-2. 100% | 210.4 MiB/s | 215.5 KiB | 00m00s [ 27/155] Installing popt-0:1.19-7.fc41 100% | 70.1 MiB/s | 143.5 KiB | 00m00s [ 28/155] Installing readline-0:8.2-10. 100% | 483.7 MiB/s | 495.3 KiB | 00m00s [ 29/155] Installing libuuid-0:2.40.2-4 100% | 0.0 B/s | 38.6 KiB | 00m00s [ 30/155] Installing libblkid-0:2.40.2- 100% | 253.4 MiB/s | 259.5 KiB | 00m00s [ 31/155] Installing gmp-1:6.3.0-2.fc41 100% | 397.3 MiB/s | 813.7 KiB | 00m00s [ 32/155] Installing libattr-0:2.5.2-4. 100% | 0.0 B/s | 29.5 KiB | 00m00s [ 33/155] Installing libacl-0:2.3.2-2.f 100% | 0.0 B/s | 40.7 KiB | 00m00s [ 34/155] Installing libxcrypt-0:4.4.36 100% | 263.2 MiB/s | 269.5 KiB | 00m00s [ 35/155] Installing libstdc++-0:14.2.1 100% | 395.2 MiB/s | 2.8 MiB | 00m00s [ 36/155] Installing libzstd-0:1.5.6-2. 100% | 389.3 MiB/s | 797.2 KiB | 00m00s [ 37/155] Installing elfutils-libelf-0: 100% | 584.6 MiB/s | 1.2 MiB | 00m00s [ 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KiB | 00m00s [ 51/155] Installing audit-libs-0:4.0.2 100% | 325.6 MiB/s | 333.4 KiB | 00m00s [ 52/155] Installing pam-libs-0:1.6.1-5 100% | 138.1 MiB/s | 141.4 KiB | 00m00s [ 53/155] Installing libcap-0:2.70-4.fc 100% | 110.0 MiB/s | 225.2 KiB | 00m00s [ 54/155] Installing systemd-libs-0:256 100% | 406.7 MiB/s | 2.0 MiB | 00m00s [ 55/155] Installing libsmartcols-0:2.4 100% | 177.1 MiB/s | 181.4 KiB | 00m00s [ 56/155] Installing libsepol-0:3.7-2.f 100% | 399.8 MiB/s | 818.8 KiB | 00m00s [ 57/155] Installing libselinux-0:3.7-5 100% | 178.0 MiB/s | 182.3 KiB | 00m00s [ 58/155] Installing sed-0:4.9-3.fc41.x 100% | 283.1 MiB/s | 869.7 KiB | 00m00s [ 59/155] Installing findutils-1:4.10.0 100% | 371.6 MiB/s | 1.9 MiB | 00m00s [ 60/155] Installing libmount-0:2.40.2- 100% | 344.7 MiB/s | 352.9 KiB | 00m00s [ 61/155] Installing lz4-libs-0:1.10.0- 100% | 143.1 MiB/s | 146.6 KiB | 00m00s [ 62/155] Installing lua-libs-0:5.4.6-6 100% | 279.5 MiB/s | 286.2 KiB | 00m00s [ 63/155] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 64/155] Installing alternatives-0:1.3 100% | 0.0 B/s | 67.9 KiB | 00m00s [ 65/155] Installing libffi-0:3.4.6-3.f 100% | 0.0 B/s | 87.8 KiB | 00m00s [ 66/155] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB | 00m00s [ 67/155] Installing p11-kit-0:0.25.5-3 100% | 315.3 MiB/s | 2.2 MiB | 00m00s [ 68/155] Installing libunistring-0:1.1 100% | 432.7 MiB/s | 1.7 MiB | 00m00s [ 69/155] Installing libidn2-0:2.3.7-2. 100% | 163.6 MiB/s | 335.1 KiB | 00m00s [ 70/155] Installing libpsl-0:0.21.5-4. 100% | 0.0 B/s | 81.7 KiB | 00m00s [ 71/155] Installing p11-kit-trust-0:0. 100% | 64.0 MiB/s | 393.1 KiB | 00m00s [ 72/155] Installing zstd-0:1.5.6-2.fc4 100% | 422.9 MiB/s | 1.7 MiB | 00m00s [ 73/155] Installing util-linux-core-0: 100% | 297.1 MiB/s | 1.5 MiB | 00m00s [ 74/155] Installing tar-2:1.35-4.fc41. 100% | 422.6 MiB/s | 3.0 MiB | 00m00s [ 75/155] Installing libsemanage-0:3.7- 100% | 144.2 MiB/s | 295.2 KiB | 00m00s [ 76/155] Installing shadow-utils-2:4.1 100% | 198.4 MiB/s | 4.2 MiB | 00m00s [ 77/155] Installing libutempter-0:1.2. 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [ 78/155] Installing zip-0:3.0-41.fc41. 100% | 345.2 MiB/s | 707.1 KiB | 00m00s [ 79/155] Installing gdbm-1:1.23-7.fc41 100% | 227.4 MiB/s | 465.8 KiB | 00m00s [ 80/155] Installing cyrus-sasl-lib-0:2 100% | 384.3 MiB/s | 2.3 MiB | 00m00s [ 81/155] Installing libfdisk-0:2.40.2- 100% | 355.5 MiB/s | 364.1 KiB | 00m00s [ 82/155] Installing libxml2-0:2.12.8-2 100% | 428.0 MiB/s | 1.7 MiB | 00m00s [ 83/155] Installing bzip2-0:1.0.8-19.f 100% | 97.8 MiB/s | 100.2 KiB | 00m00s [ 84/155] Installing add-determinism-0: 100% | 449.2 MiB/s | 2.2 MiB | 00m00s [ 85/155] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 86/155] Installing sqlite-libs-0:3.46 100% | 357.3 MiB/s | 1.4 MiB | 00m00s [ 87/155] Installing ed-0:1.20.2-2.fc41 100% | 145.7 MiB/s | 149.2 KiB | 00m00s [ 88/155] Installing patch-0:2.7.6-25.f 100% | 261.9 MiB/s | 268.2 KiB | 00m00s [ 89/155] Installing elfutils-default-y 100% | 510.7 KiB/s | 2.0 KiB | 00m00s [ 90/155] Installing elfutils-libs-0:0. 100% | 316.4 MiB/s | 648.0 KiB | 00m00s [ 91/155] Installing cpio-0:2.15-2.fc41 100% | 274.9 MiB/s | 1.1 MiB | 00m00s [ 92/155] Installing diffutils-0:3.10-8 100% | 318.1 MiB/s | 1.6 MiB | 00m00s [ 93/155] Installing libgomp-0:14.2.1-3 100% | 512.5 MiB/s | 524.8 KiB | 00m00s [ 94/155] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 55.8 KiB | 00m00s [ 95/155] Installing libverto-0:0.3.2-9 100% | 0.0 B/s | 31.3 KiB | 00m00s [ 96/155] Installing jansson-0:2.13.1-1 100% | 0.0 B/s | 89.7 KiB | 00m00s [ 97/155] Installing libpkgconf-0:2.3.0 100% | 0.0 B/s | 79.3 KiB | 00m00s [ 98/155] Installing pkgconf-0:2.3.0-1. 100% | 89.0 MiB/s | 91.1 KiB | 00m00s [ 99/155] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [100/155] Installing xxhash-libs-0:0.8. 100% | 0.0 B/s | 89.8 KiB | 00m00s [101/155] Installing libbrotli-0:1.1.0- 100% | 273.4 MiB/s | 839.9 KiB | 00m00s [102/155] Installing libnghttp2-0:1.62. 100% | 163.2 MiB/s | 167.1 KiB | 00m00s [103/155] Installing libtool-ltdl-0:2.4 100% | 0.0 B/s | 67.3 KiB | 00m00s [104/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [105/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [106/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [107/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [108/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [109/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [110/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [111/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [112/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [113/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [114/155] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [115/155] Installing coreutils-common-0 100% | 447.6 MiB/s | 11.2 MiB | 00m00s [116/155] Installing openssl-libs-1:3.2 100% | 460.5 MiB/s | 7.8 MiB | 00m00s [117/155] Installing coreutils-0:9.5-10 100% | 333.0 MiB/s | 5.7 MiB | 00m00s [118/155] Installing ca-certificates-0: 100% | 4.4 MiB/s | 2.4 MiB | 00m01s [119/155] Installing krb5-libs-0:1.21.3 100% | 328.5 MiB/s | 2.3 MiB | 00m00s [120/155] Installing libarchive-0:3.7.4 100% | 301.0 MiB/s | 924.6 KiB | 00m00s [121/155] Installing libtirpc-0:1.3.5-0 100% | 199.7 MiB/s | 204.5 KiB | 00m00s [122/155] Installing gzip-0:1.13-2.fc41 100% | 192.7 MiB/s | 394.6 KiB | 00m00s [123/155] Installing authselect-libs-0: 100% | 204.4 MiB/s | 837.2 KiB | 00m00s [124/155] Installing cracklib-0:2.9.11- 100% | 81.5 MiB/s | 250.3 KiB | 00m00s [125/155] Installing libpwquality-0:1.4 100% | 140.0 MiB/s | 430.1 KiB | 00m00s [126/155] Installing libnsl2-0:2.0.1-2. 100% | 57.7 MiB/s | 59.1 KiB | 00m00s [127/155] Installing pam-0:1.6.1-5.fc41 100% | 187.7 MiB/s | 1.9 MiB | 00m00s [128/155] Installing libssh-0:0.10.6-8. 100% | 251.7 MiB/s | 515.4 KiB | 00m00s [129/155] Installing rpm-sequoia-0:1.7. 100% | 394.5 MiB/s | 2.4 MiB | 00m00s [130/155] Installing rpm-libs-0:4.19.94 100% | 353.2 MiB/s | 723.4 KiB | 00m00s [131/155] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.5 KiB | 00m00s [132/155] Installing libevent-0:2.1.12- 100% | 439.2 MiB/s | 899.5 KiB | 00m00s [133/155] Installing openldap-0:2.6.8-5 100% | 316.4 MiB/s | 648.0 KiB | 00m00s [134/155] Installing libcurl-0:8.9.1-2. 100% | 400.0 MiB/s | 819.2 KiB | 00m00s [135/155] Installing elfutils-debuginfo 100% | 65.3 MiB/s | 66.9 KiB | 00m00s [136/155] Installing elfutils-0:0.191-8 100% | 426.7 MiB/s | 2.6 MiB | 00m00s [137/155] Installing binutils-0:2.43.1- 100% | 423.5 MiB/s | 27.5 MiB | 00m00s [138/155] Installing gdb-minimal-0:15.1 100% | 433.0 MiB/s | 13.0 MiB | 00m00s [139/155] Installing debugedit-0:5.0-17 100% | 197.3 MiB/s | 202.0 KiB | 00m00s [140/155] Installing curl-0:8.9.1-2.fc4 100% | 86.7 MiB/s | 798.6 KiB | 00m00s [141/155] Installing rpm-0:4.19.94-1.fc 100% | 192.5 MiB/s | 2.5 MiB | 00m00s [142/155] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [143/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [144/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [145/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [146/155] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.0 KiB | 00m00s [148/155] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 92.8 MiB/s | 190.1 KiB | 00m00s [150/155] Installing rpm-build-0:4.19.9 100% | 198.0 MiB/s | 202.8 KiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 197.3 MiB/s | 3.7 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 158.1 MiB/s | 161.9 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [155/155] Installing info-0:7.1-3.fc41. 100% | 494.8 KiB/s | 362.2 KiB | 00m01s Warning: skipped PGP checks for 5 packages from repository: copr_base Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc41.x86_64 authselect-libs-1.5.0-8.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-1.fc41.x86_64 binutils-2.43.1-2.fc41.x86_64 build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch coreutils-9.5-10.fc41.x86_64 coreutils-common-9.5-10.fc41.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20240828-1.git5f66e81.fc41.noarch curl-8.9.1-2.fc41.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.0-17.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.x86_64 elfutils-debuginfod-client-0.191-8.fc41.x86_64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.x86_64 elfutils-libs-0.191-8.fc41.x86_64 fedora-gpg-keys-41-0.5.noarch fedora-release-41-0.21.noarch fedora-release-common-41-0.21.noarch fedora-release-identity-basic-41-0.21.noarch fedora-repos-41-0.5.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-23.fc41.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.1-1.fc41.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-3.fc41.x86_64 glibc-common-2.40-3.fc41.x86_64 glibc-gconv-extra-2.40-3.fc41.x86_64 glibc-minimal-langpack-2.40-3.fc41.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1-3.fc41.x86_64 jansson-2.13.1-10.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-2.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.4-3.fc41.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-4.fc41.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-3.fc41.x86_64 libcurl-8.9.1-2.fc41.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-4.fc41.x86_64 libffi-3.4.6-3.fc41.x86_64 libgcc-14.2.1-3.fc41.x86_64 libgomp-14.2.1-3.fc41.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-4.fc41.x86_64 libnghttp2-1.62.1-2.fc41.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc41.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-5.fc41.x86_64 libsemanage-3.7-2.fc41.x86_64 libsepol-3.7-2.fc41.x86_64 libsmartcols-2.40.2-4.fc41.x86_64 libssh-0.10.6-8.fc41.x86_64 libssh-config-0.10.6-8.fc41.noarch libstdc++-14.2.1-3.fc41.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.5-0.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libutempter-1.2.1-15.fc41.x86_64 libuuid-2.40.2-4.fc41.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-7.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-9.fc41.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-5.fc41.x86_64 pam-libs-1.6.1-5.fc41.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc41.x86_64 pkgconf-m4-2.3.0-1.fc41.noarch pkgconf-pkg-config-2.3.0-1.fc41.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc41.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc41.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-10.fc41.x86_64 redhat-rpm-config-293-1.fc41.noarch rpm-4.19.94-1.fc41.x86_64 rpm-build-4.19.94-1.fc41.x86_64 rpm-build-libs-4.19.94-1.fc41.x86_64 rpm-libs-4.19.94-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc41.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.15.1-12.fc41.x86_64 sqlite-libs-3.46.1-1.fc41.x86_64 systemd-libs-256.7-1.fc41.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-4.fc41.x86_64 util-linux-core-2.40.2-4.fc41.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc41.x86_64 xz-5.6.2-2.fc41.x86_64 xz-libs-5.6.2-2.fc41.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc41.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1728851908.372295/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-tcl_nnnu/snakemake/snakemake.spec) Config(child) 0 minutes 16 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-8.18.2-4.fc41.src.rpm) Config(fedora-41-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1728851908.372295/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1728851908.372295/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1728851908.372295/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc41.x86_64 dnf5-plugins-5.2.6.2-1.fc41.x86_64 Finish: chroot init Start: build phase for snakemake-8.18.2-4.fc41.src.rpm Start: build setup for snakemake-8.18.2-4.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.src.rpm Updating and loading repositories: fedora 100% | 454.9 KiB/s | 25.9 KiB | 00m00s updates 100% | 280.7 KiB/s | 28.6 KiB | 00m00s Copr repository 100% | 34.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: environment-modules x86_64 5.4.0-2.fc41 fedora 1.7 MiB graphviz x86_64 12.1.0-1.fc41 fedora 20.8 MiB help2man noarch 1.49.3-6.fc41 fedora 415.6 KiB python-unversioned-command noarch 3.13.0-1.fc41 fedora 23.0 B python3-boto3 noarch 1.35.37-1.fc41 fedora 2.0 MiB python3-devel x86_64 3.13.0-1.fc41 fedora 1.8 MiB python3-flask noarch 1:3.0.3-8.fc41 copr_base 862.7 KiB python3-google-cloud-storage noarch 2.14.0-6.fc41 fedora 1.2 MiB python3-pandas x86_64 2.2.1-7.fc41 fedora 42.0 MiB python3-pytest noarch 8.3.1-2.fc41 copr_base 20.9 MiB python3-pytest-mock noarch 3.14.0-2.fc41 copr_base 117.0 KiB python3-snakemake-executor-plugin-cluster-generic noarch 1.0.9-3.fc41 fedora 39.7 KiB python3-snakemake-storage-plugin-fs noarch 1.0.6-1.fc41 copr_base 30.7 KiB python3-snakemake-storage-plugin-http noarch 0.2.3-6.fc41 fedora 28.3 KiB python3-snakemake-storage-plugin-s3 noarch 0.2.12-1.fc41 fedora 37.3 KiB singularity-ce x86_64 4.2.1-1.fc41 fedora 180.6 MiB strace x86_64 6.10-1.fc41 fedora 2.5 MiB stress x86_64 1.0.7-5.fc41 fedora 67.9 KiB vim-filesystem noarch 2:9.1.737-1.fc41 fedora 40.0 B Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-13.fc41 fedora 192.7 KiB abseil-cpp x86_64 20240722.0-1.fc41 fedora 2.6 MiB adobe-mappings-cmap noarch 20230622-4.fc41 fedora 14.4 MiB adobe-mappings-cmap-deprecated noarch 20230622-4.fc41 fedora 582.1 KiB adobe-mappings-pdf noarch 20190401-8.fc41 fedora 4.4 MiB avahi-libs x86_64 0.8-29.fc41 fedora 166.3 KiB c-ares x86_64 1.33.0-1.fc41 fedora 240.3 KiB cairo x86_64 1.18.0-4.fc41 fedora 1.7 MiB cairo-gobject x86_64 1.18.0-4.fc41 fedora 35.2 KiB conmon x86_64 2:2.1.12-3.fc41 fedora 166.4 KiB crun x86_64 1.17-1.fc41 fedora 519.7 KiB cryptsetup x86_64 2.7.5-1.fc41 fedora 715.8 KiB cryptsetup-libs x86_64 2.7.5-1.fc41 fedora 2.3 MiB cups-libs x86_64 1:2.4.11-1.fc41 fedora 622.9 KiB dbus x86_64 1:1.14.10-4.fc41 fedora 0.0 B dbus-broker x86_64 36-4.fc41 fedora 382.8 KiB dbus-common noarch 1:1.14.10-4.fc41 fedora 11.2 KiB dbus-libs x86_64 1:1.14.10-4.fc41 fedora 368.9 KiB default-fonts-core-sans noarch 4.1-2.fc41 fedora 11.9 KiB device-mapper x86_64 1.02.199-4.fc41 fedora 348.2 KiB device-mapper-libs x86_64 1.02.199-4.fc41 fedora 414.7 KiB expat x86_64 2.6.3-1.fc41 fedora 291.5 KiB flexiblas x86_64 3.4.4-3.fc41 fedora 48.5 KiB flexiblas-netlib x86_64 3.4.4-3.fc41 fedora 10.7 MiB flexiblas-openblas-openmp x86_64 3.4.4-3.fc41 fedora 43.3 KiB fontconfig x86_64 2.15.0-8.fc41 fedora 791.9 KiB fonts-filesystem noarch 1:2.0.5-17.fc41 fedora 0.0 B freetype x86_64 2.13.3-1.fc41 fedora 850.5 KiB fribidi x86_64 1.0.15-2.fc41 fedora 368.4 KiB fuse x86_64 2.9.9-22.fc41 fedora 219.0 KiB fuse-common x86_64 3.16.2-4.fc41 fedora 38.0 B fuse3 x86_64 3.16.2-4.fc41 fedora 126.0 KiB fuse3-libs x86_64 3.16.2-4.fc41 fedora 281.5 KiB gd x86_64 2.3.3-17.fc41 fedora 403.7 KiB gdk-pixbuf2 x86_64 2.42.12-6.fc41 fedora 2.5 MiB glib2 x86_64 2.82.1-1.fc41 fedora 14.7 MiB gnupg2 x86_64 2.4.5-3.fc41 fedora 9.5 MiB gnutls x86_64 3.8.6-7.fc41 fedora 3.2 MiB google-crc32c x86_64 1.1.2-10.fc41 fedora 24.1 KiB google-droid-sans-fonts noarch 20200215-21.fc41 fedora 6.3 MiB google-noto-fonts-common noarch 20240701-2.fc41 fedora 17.5 KiB google-noto-sans-vf-fonts noarch 20240701-2.fc41 fedora 1.2 MiB gpgme x86_64 1.23.2-5.fc41 fedora 579.3 KiB gpgmepp x86_64 1.23.2-5.fc41 fedora 424.2 KiB graphite2 x86_64 1.3.14-16.fc41 fedora 192.0 KiB graphviz-libs x86_64 12.1.0-1.fc41 fedora 1.2 MiB groff-base x86_64 1.23.0-7.fc41 fedora 3.8 MiB grpc-data noarch 1.48.4-41.fc41 fedora 29.6 KiB gts x86_64 0.7.6-49.20121130.fc41 fedora 650.2 KiB harfbuzz x86_64 9.0.0-3.fc41 fedora 2.6 MiB jbig2dec-libs x86_64 0.20-5.fc41 fedora 169.0 KiB jbigkit-libs x86_64 2.1-30.fc41 fedora 117.6 KiB json-c x86_64 0.17-4.fc41 fedora 82.4 KiB lasi x86_64 1.1.3-14.fc41 fedora 130.8 KiB lcms2 x86_64 2.16-4.fc41 fedora 424.9 KiB less x86_64 661-2.fc41 fedora 405.3 KiB libICE x86_64 1.1.1-4.fc41 fedora 181.2 KiB libSM x86_64 1.2.4-4.fc41 fedora 97.3 KiB libX11 x86_64 1.8.10-2.fc41 fedora 1.3 MiB libX11-common noarch 1.8.10-2.fc41 fedora 1.1 MiB libXau x86_64 1.0.11-7.fc41 fedora 66.9 KiB libXext x86_64 1.3.6-2.fc41 fedora 90.1 KiB libXft x86_64 2.3.8-7.fc41 fedora 164.5 KiB libXpm x86_64 3.5.17-4.fc41 fedora 148.4 KiB libXrender x86_64 0.9.11-7.fc41 fedora 50.1 KiB libXt x86_64 1.3.0-4.fc41 fedora 429.9 KiB libaom x86_64 3.9.0-3.fc41 fedora 5.1 MiB libassuan x86_64 2.5.7-2.fc41 fedora 163.8 KiB libavif x86_64 1.0.4-7.fc41 fedora 183.8 KiB libb2 x86_64 0.98.1-12.fc41 fedora 42.2 KiB libdatrie x86_64 0.2.13-10.fc41 fedora 57.9 KiB libdav1d x86_64 1.4.3-2.fc41 fedora 1.7 MiB libgcrypt x86_64 1.11.0-3.fc41 fedora 1.5 MiB libgfortran x86_64 14.2.1-3.fc41 fedora 3.0 MiB libgpg-error x86_64 1.50-2.fc41 fedora 889.5 KiB libgs x86_64 10.03.1-3.fc41 fedora 23.2 MiB libicu x86_64 74.2-2.fc41 fedora 34.9 MiB libijs x86_64 0.35-23.fc41 fedora 61.6 KiB libimagequant x86_64 4.0.3-5.fc41 fedora 666.7 KiB libjpeg-turbo x86_64 3.0.2-3.fc41 fedora 776.9 KiB libksba x86_64 1.6.7-2.fc41 fedora 398.4 KiB liblerc x86_64 4.0.0-7.fc41 fedora 607.5 KiB libpaper x86_64 1:2.1.1-7.fc41 fedora 48.9 KiB libpipeline x86_64 1.5.7-6.fc41 fedora 124.3 KiB libpng x86_64 2:1.6.40-4.fc41 fedora 245.8 KiB libquadmath x86_64 14.2.1-3.fc41 fedora 325.9 KiB librsvg2 x86_64 2.59.1-1.fc41 fedora 4.6 MiB libseccomp x86_64 2.5.5-2.fc41 fedora 173.3 KiB libthai x86_64 0.1.29-9.fc41 fedora 783.5 KiB libtiff x86_64 4.6.0-6.fc41 fedora 606.0 KiB libvmaf x86_64 3.0.0-2.fc41 fedora 823.0 KiB libwebp x86_64 1.4.0-4.fc41 fedora 822.6 KiB libxcb x86_64 1.17.0-3.fc41 fedora 1.2 MiB lzo x86_64 2.10-13.fc41 fedora 166.9 KiB man-db x86_64 2.12.1-2.fc41 fedora 2.8 MiB mpdecimal x86_64 2.5.1-16.fc41 fedora 204.9 KiB ncurses x86_64 6.5-2.20240629.fc41 fedora 627.3 KiB netpbm x86_64 11.02.00-7.fc41 fedora 577.1 KiB nettle x86_64 3.10-3.fc41 fedora 793.0 KiB npth x86_64 1.7-2.fc41 fedora 49.6 KiB nspr x86_64 4.35.0-29.fc41 fedora 320.4 KiB nss x86_64 3.104.0-1.fc41 fedora 1.9 MiB nss-softokn x86_64 3.104.0-1.fc41 fedora 1.9 MiB nss-softokn-freebl x86_64 3.104.0-1.fc41 fedora 783.6 KiB nss-sysinit x86_64 3.104.0-1.fc41 fedora 22.2 KiB nss-util x86_64 3.104.0-1.fc41 fedora 205.1 KiB openblas x86_64 0.3.26-5.fc41 fedora 96.0 KiB openblas-openmp x86_64 0.3.26-5.fc41 fedora 39.4 MiB openjpeg x86_64 2.5.2-4.fc41 fedora 445.7 KiB pango x86_64 1.54.0-2.fc41 fedora 996.2 KiB perl-AutoLoader noarch 5.74-511.fc41 fedora 20.5 KiB perl-B x86_64 1.89-511.fc41 fedora 498.0 KiB perl-Carp noarch 1.54-511.fc41 fedora 46.6 KiB perl-Class-Struct noarch 0.68-511.fc41 fedora 25.4 KiB perl-Data-Dumper x86_64 2.189-512.fc41 fedora 111.7 KiB perl-Digest noarch 1.20-511.fc41 fedora 35.3 KiB perl-Digest-MD5 x86_64 2.59-5.fc41 fedora 59.8 KiB perl-DynaLoader x86_64 1.56-511.fc41 fedora 32.1 KiB perl-Encode x86_64 4:3.21-511.fc41 fedora 4.7 MiB perl-Errno x86_64 1.38-511.fc41 fedora 8.4 KiB perl-Exporter noarch 5.78-511.fc41 fedora 54.3 KiB perl-Fcntl x86_64 1.18-511.fc41 fedora 49.0 KiB perl-File-Basename noarch 2.86-511.fc41 fedora 14.0 KiB perl-File-Path noarch 2.18-511.fc41 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.100-511.fc41 fedora 162.3 KiB perl-File-stat noarch 1.14-511.fc41 fedora 12.5 KiB perl-FileHandle noarch 2.05-511.fc41 fedora 9.3 KiB perl-Getopt-Long noarch 1:2.58-2.fc41 fedora 144.5 KiB perl-Getopt-Std noarch 1.14-511.fc41 fedora 11.2 KiB perl-HTTP-Tiny noarch 0.088-512.fc41 fedora 152.2 KiB perl-IO x86_64 1.55-511.fc41 fedora 151.1 KiB perl-IO-Socket-IP noarch 0.42-512.fc41 fedora 98.7 KiB perl-IO-Socket-SSL noarch 2.089-1.fc41 fedora 703.3 KiB perl-IPC-Open3 noarch 1.22-511.fc41 fedora 22.5 KiB perl-MIME-Base32 noarch 1.303-21.fc41 fedora 30.7 KiB perl-MIME-Base64 x86_64 3.16-511.fc41 fedora 46.1 KiB perl-Mozilla-CA noarch 20240730-1.fc41 fedora 9.8 KiB perl-Net-SSLeay x86_64 1.94-7.fc41 fedora 1.3 MiB perl-POSIX x86_64 2.20-511.fc41 fedora 235.1 KiB perl-PathTools x86_64 3.91-511.fc41 fedora 180.0 KiB perl-Pod-Escapes noarch 1:1.07-511.fc41 fedora 24.9 KiB perl-Pod-Perldoc noarch 3.28.01-512.fc41 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.45-511.fc41 fedora 560.9 KiB perl-Pod-Usage noarch 4:2.03-511.fc41 fedora 84.8 KiB perl-Scalar-List-Utils x86_64 5:1.66-1.fc41 fedora 146.7 KiB perl-SelectSaver noarch 1.02-511.fc41 fedora 2.2 KiB perl-Socket x86_64 4:2.038-511.fc41 fedora 124.0 KiB perl-Storable x86_64 1:3.32-511.fc41 fedora 232.4 KiB perl-Symbol noarch 1.09-511.fc41 fedora 6.8 KiB perl-Term-ANSIColor noarch 5.01-512.fc41 fedora 97.5 KiB perl-Term-Cap noarch 1.18-511.fc41 fedora 29.3 KiB perl-Text-ParseWords noarch 3.31-511.fc41 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 2024.001-511.fc41 fedora 22.6 KiB perl-Time-Local noarch 2:1.350-511.fc41 fedora 69.0 KiB perl-URI noarch 5.30-1.fc41 fedora 256.9 KiB perl-base noarch 2.27-511.fc41 fedora 12.5 KiB perl-constant noarch 1.33-512.fc41 fedora 26.2 KiB perl-if noarch 0.61.000-511.fc41 fedora 5.8 KiB perl-interpreter x86_64 4:5.40.0-511.fc41 fedora 122.3 KiB perl-libnet noarch 3.15-512.fc41 fedora 289.4 KiB perl-libs x86_64 4:5.40.0-511.fc41 fedora 9.9 MiB perl-locale noarch 1.12-511.fc41 fedora 6.5 KiB perl-mro x86_64 1.29-511.fc41 fedora 45.6 KiB perl-overload noarch 1.37-511.fc41 fedora 71.5 KiB perl-overloading noarch 0.02-511.fc41 fedora 4.8 KiB perl-parent noarch 1:0.242-1.fc41 fedora 10.0 KiB perl-podlators noarch 1:6.0.2-2.fc41 fedora 317.5 KiB perl-vars noarch 1.05-511.fc41 fedora 3.9 KiB pixman x86_64 0.43.4-2.fc41 fedora 718.1 KiB poppler x86_64 24.08.0-1.fc41 fedora 3.6 MiB poppler-data noarch 0.4.11-8.fc41 fedora 12.3 MiB poppler-glib x86_64 24.08.0-1.fc41 fedora 586.9 KiB procps-ng x86_64 4.0.4-4.fc41 fedora 1.0 MiB protobuf x86_64 3.19.6-10.fc41 fedora 3.3 MiB pyproject-rpm-macros noarch 1.15.1-1.fc41 copr_base 109.2 KiB python-pip-wheel noarch 24.2-2.fc41 copr_base 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB python3 x86_64 3.13.0-1.fc41 fedora 31.8 KiB python3-Bottleneck x86_64 1.3.7-8.fc41 copr_base 635.3 KiB python3-argparse-dataclass noarch 2.0.0-8.fc41 fedora 50.1 KiB python3-blinker noarch 1.7.0-3.fc41 copr_base 107.5 KiB python3-botocore noarch 1.35.39-1.fc41 copr_base 94.5 MiB python3-cachetools noarch 5.4.0-2.fc41 fedora 144.4 KiB python3-charset-normalizer noarch 3.3.2-6.fc41 copr_base 314.8 KiB python3-click noarch 8.1.7-6.fc41 copr_base 1.1 MiB python3-configargparse noarch 1.7-5.fc41 copr_base 240.6 KiB python3-dateutil noarch 1:2.8.2-16.fc41 copr_base 879.2 KiB python3-google-api-core noarch 1:2.11.1-10.fc41 fedora 801.1 KiB python3-google-auth noarch 1:2.35.0-1.fc41 fedora 1.4 MiB python3-google-cloud-core noarch 2.3.3-6.fc41 fedora 179.4 KiB python3-google-crc32c x86_64 1.6.0-1.fc41 copr_base 62.6 KiB python3-google-resumable-media noarch 2.7.2-1.fc41 copr_base 653.8 KiB python3-googleapis-common-protos noarch 1.63.0-7.fc41 copr_base 778.1 KiB python3-grpcio x86_64 1.48.4-41.fc41 fedora 7.4 MiB python3-grpcio-status noarch 1.48.4-41.fc41 fedora 14.0 KiB python3-idna noarch 3.9-1.fc41 copr_base 639.8 KiB python3-iniconfig noarch 1.1.1-24.fc41 copr_base 20.6 KiB python3-itsdangerous noarch 2.1.2-9.fc41 copr_base 95.5 KiB python3-jinja2 noarch 3.1.4-5.fc41 copr_base 2.9 MiB python3-jmespath noarch 1.0.1-8.fc41 copr_base 149.8 KiB python3-libs x86_64 3.13.0-1.fc41 fedora 40.3 MiB python3-markupsafe x86_64 2.1.5-4.fc41 copr_base 61.5 KiB python3-numexpr x86_64 2.8.5-7.fc41 fedora 574.8 KiB python3-numpy x86_64 1:1.26.4-8.fc41 copr_base 43.8 MiB python3-numpy-f2py x86_64 1:1.26.4-8.fc41 copr_base 2.8 MiB python3-oauthlib noarch 3.2.2-5.fc41 copr_base 993.9 KiB python3-packaging noarch 24.1-2.fc41 copr_base 422.3 KiB python3-platformdirs noarch 4.2.2-3.fc41 copr_base 168.4 KiB python3-pluggy noarch 1.5.0-1.fc41 copr_base 193.4 KiB python3-pooch noarch 1.8.2-4.fc41 copr_base 625.5 KiB python3-protobuf x86_64 3.19.6-10.fc41 fedora 1.9 MiB python3-pyasn1 noarch 0.6.0-3.fc41 fedora 903.6 KiB python3-pyasn1-modules noarch 0.6.0-3.fc41 fedora 1.7 MiB python3-pytz noarch 2024.2-1.fc41 copr_base 223.7 KiB python3-requests noarch 2.32.3-3.fc41 copr_base 485.9 KiB python3-requests-oauthlib noarch 1.3.1-10.fc41 copr_base 133.4 KiB python3-reretry noarch 0.11.8-11.fc41 fedora 32.1 KiB python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB python3-rsa noarch 4.9-7.fc41 fedora 239.0 KiB python3-s3transfer noarch 0.10.3-1.fc41 copr_base 619.1 KiB python3-scipy x86_64 1.11.3-15.fc41 fedora 62.5 MiB python3-setuptools noarch 69.2.0-9.fc41 copr_base 7.2 MiB python3-six noarch 1.16.0-24.fc41 copr_base 118.3 KiB python3-snakemake-interface-common noarch 1.17.4-1.fc41 copr_base 98.4 KiB python3-snakemake-interface-executor-plugins noarch 9.3.2-1.fc41 copr_base 149.2 KiB python3-snakemake-interface-storage-plugins noarch 3.3.0-1.fc41 copr_base 117.2 KiB python3-sysrsync noarch 1.1.1-5.fc41 fedora 28.4 KiB python3-throttler noarch 1.2.2-11.fc41 fedora 33.9 KiB python3-urllib3 noarch 2.2.3-5.fc41 copr_base 1.0 MiB python3-werkzeug noarch 3.0.4-3.fc41 copr_base 1.8 MiB python3-wrapt x86_64 1.16.0-6.fc41 fedora 197.4 KiB rav1e-libs x86_64 0.7.1-4.fc41 fedora 3.0 MiB re2 x86_64 1:20240702-19.fc41 fedora 557.0 KiB rsvg-pixbuf-loader x86_64 2.59.1-1.fc41 fedora 335.9 KiB rsync x86_64 3.3.0-3.fc41 fedora 776.4 KiB shared-mime-info x86_64 2.3-6.fc41 fedora 5.2 MiB squashfs-tools x86_64 4.6.1-5.fc41 fedora 657.9 KiB svt-av1-libs x86_64 2.1.0-2.fc41 fedora 7.1 MiB systemd x86_64 256.7-1.fc41 copr_base 17.0 MiB systemd-pam x86_64 256.7-1.fc41 copr_base 1.1 MiB systemd-rpm-macros noarch 256.7-1.fc41 copr_base 10.7 KiB tcl x86_64 1:8.6.14-2.fc41 fedora 4.2 MiB tpm2-tss x86_64 4.1.3-3.fc41 fedora 1.6 MiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB urw-base35-bookman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-c059-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 20200910-23.fc41 fedora 84.3 KiB urw-base35-fonts noarch 20200910-23.fc41 fedora 5.3 KiB urw-base35-fonts-common noarch 20200910-23.fc41 fedora 37.4 KiB urw-base35-gothic-fonts noarch 20200910-23.fc41 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 20200910-23.fc41 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 20200910-23.fc41 fedora 2.4 MiB urw-base35-p052-fonts noarch 20200910-23.fc41 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 20200910-23.fc41 fedora 64.9 KiB urw-base35-z003-fonts noarch 20200910-23.fc41 fedora 390.8 KiB xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB yajl x86_64 2.1.0-24.fc41 fedora 90.6 KiB Transaction Summary: Installing: 278 packages Total size of inbound packages is 204 MiB. Need to download 204 MiB. After this operation, 886 MiB extra will be used (install 886 MiB, remove 0 B). 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python3-six-0:1.16.0-24.fc41. 100% | 2.7 MiB/s | 41.8 KiB | 00m00s [270/278] systemd-0:256.7-1.fc41.x86_64 100% | 52.7 MiB/s | 5.6 MiB | 00m00s [271/278] python3-pooch-0:1.8.2-4.fc41. 100% | 17.7 MiB/s | 126.9 KiB | 00m00s [272/278] python-rpm-macros-0:3.13-3.fc 100% | 17.3 MiB/s | 17.7 KiB | 00m00s [273/278] python3-platformdirs-0:4.2.2- 100% | 13.5 MiB/s | 41.5 KiB | 00m00s [274/278] python3-rpm-macros-0:3.13-3.f 100% | 12.2 MiB/s | 12.4 KiB | 00m00s [275/278] python3-rpm-generators-0:14-1 100% | 14.3 MiB/s | 29.3 KiB | 00m00s [276/278] pyproject-rpm-macros-0:1.15.1 100% | 21.4 MiB/s | 43.8 KiB | 00m00s [277/278] systemd-rpm-macros-0:256.7-1. 100% | 2.6 MiB/s | 34.1 KiB | 00m00s [278/278] python3-numpy-f2py-1:1.26.4-8 100% | 3.8 MiB/s | 501.7 KiB | 00m00s -------------------------------------------------------------------------------- [278/278] Total 100% | 143.8 MiB/s | 203.6 MiB | 00m01s Running transaction [ 1/280] Verify package files 100% | 476.0 B/s | 278.0 B | 00m01s [ 2/280] 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Finish: build setup for snakemake-8.18.2-4.fc41.src.rpm Start: rpmbuild snakemake-8.18.2-4.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.NwbXeK + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + test -d /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/rm -rf /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.SbS3RO + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd /builddir/build/BUILD/snakemake-8.18.2-build + rm -rf snakemake-8.18.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-8.18.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd 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recursedown('./tests/test_set_resources_complex/test-profile') recursedown('./tests/test_set_threads') recursedown('./tests/test_set_threads/expected-results') recursedown('./tests/test_shadow') recursedown('./tests/test_shadow/expected-results') recursedown('./tests/test_shadow_copy') recursedown('./tests/test_shadow_copy/expected-results') recursedown('./tests/test_shadow_prefix') recursedown('./tests/test_shadow_prefix/expected-results') recursedown('./tests/test_shadowed_log') recursedown('./tests/test_shadowed_log/expected-results') recursedown('./tests/test_shell') recursedown('./tests/test_shell/expected-results') recursedown('./tests/test_shell_exec') recursedown('./tests/test_shell_exec/expected-results') recursedown('./tests/test_singularity') recursedown('./tests/test_singularity/expected-results') recursedown('./tests/test_singularity_conda') recursedown('./tests/test_singularity_conda/expected-results') recursedown('./tests/test_singularity_global') recursedown('./tests/test_singularity_global/expected-results') recursedown('./tests/test_singularity_module') recursedown('./tests/test_singularity_module/expected-results') recursedown('./tests/test_singularity_none') recursedown('./tests/test_singularity_none/expected-results') recursedown('./tests/test_slurm_mpi') recursedown('./tests/test_slurm_mpi/envs') recursedown('./tests/test_slurm_mpi/expected-results') recursedown('./tests/test_solver') recursedown('./tests/test_solver/expected-results') recursedown('./tests/test_source_path') recursedown('./tests/test_source_path/expected-results') recursedown('./tests/test_source_path/workflow') recursedown('./tests/test_source_path/workflow/resources') recursedown('./tests/test_spaces_in_fnames') recursedown('./tests/test_spaces_in_fnames/expected-results') recursedown('./tests/test_speed') recursedown('./tests/test_storage') recursedown('./tests/test_storage/expected-results') recursedown('./tests/test_storage_cleanup_local') recursedown('./tests/test_storage_cleanup_local/expected-results') recursedown('./tests/test_storage_cleanup_local/expected-results/fs-storage') recursedown('./tests/test_storage_localrule') recursedown('./tests/test_storage_localrule/expected-results') recursedown('./tests/test_storage_localrule/expected-results/fs-storage') recursedown('./tests/test_strict_mode') recursedown('./tests/test_strict_mode/expected-results') recursedown('./tests/test_string_resources') recursedown('./tests/test_string_resources/expected-results') recursedown('./tests/test_subworkflow_config') recursedown('./tests/test_subworkflow_config/expected-results') recursedown('./tests/test_subworkflows') recursedown('./tests/test_subworkflows/expected-results') recursedown('./tests/test_symlink_temp') recursedown('./tests/test_symlink_temp/expected-results') recursedown('./tests/test_symlink_time_handling') recursedown('./tests/test_symlink_time_handling/expected-results') recursedown('./tests/test_temp') recursedown('./tests/test_temp/expected-results') recursedown('./tests/test_temp_expand') recursedown('./tests/test_temp_expand/expected-results') recursedown('./tests/test_template_engine') recursedown('./tests/test_template_engine/expected-results') recursedown('./tests/test_tes') recursedown('./tests/test_tes/expected-results') recursedown('./tests/test_threads') recursedown('./tests/test_threads/expected-results') recursedown('./tests/test_threads0') recursedown('./tests/test_threads0/expected-results') recursedown('./tests/test_tibanna') recursedown('./tests/test_tibanna/expected-results') recursedown('./tests/test_tibanna/scripts') recursedown('./tests/test_tmpdir') recursedown('./tests/test_tmpdir/expected-results') recursedown('./tests/test_touch') recursedown('./tests/test_touch/expected-results') recursedown('./tests/test_touch_pipeline_with_temp_dir') recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results') recursedown('./tests/test_touch_remote_prefix') recursedown('./tests/test_touch_remote_prefix/expected-results') recursedown('./tests/test_touch_with_directories') recursedown('./tests/test_touch_with_directories/expected-results') recursedown('./tests/test_unpack_dict') recursedown('./tests/test_unpack_dict/expected-results') recursedown('./tests/test_unpack_list') recursedown('./tests/test_unpack_list/expected-results') recursedown('./tests/test_until') recursedown('./tests/test_until/expected-results') recursedown('./tests/test_update_config') recursedown('./tests/test_update_config/expected-results') recursedown('./tests/test_update_flag') recursedown('./tests/test_update_flag/expected-results') recursedown('./tests/test_url_include') recursedown('./tests/test_url_include/expected-results') recursedown('./tests/test_use_rule_same_module') recursedown('./tests/test_use_rule_same_module/expected-results') recursedown('./tests/test_validate') recursedown('./tests/test_validate/expected-results') recursedown('./tests/test_wildcard_count_ambiguity') recursedown('./tests/test_wildcard_count_ambiguity/expected-results') recursedown('./tests/test_wildcard_keyword') ./setup.py: no change ./versioneer.py: no change ./.github/workflows/scripts/sacct-proxy.py: updating ./apidocs/conf.py: updating ./docs/conf.py: updating ./examples/hello-world/scripts/plot-hist.py: no change ./snakemake/__init__.py: no change ./snakemake/__main__.py: no change ./snakemake/_version.py: no change ./snakemake/api.py: no change ./snakemake/benchmark.py: no change ./snakemake/checkpoints.py: no change ./snakemake/cli.py: no change ./snakemake/cwl.py: no change ./snakemake/dag.py: no change ./snakemake/decorators.py: no change ./snakemake/exceptions.py: no change ./snakemake/gui.py: no change ./snakemake/io.py: no change ./snakemake/ioflags.py: no change ./snakemake/ioutils.py: no change ./snakemake/jobs.py: no change ./snakemake/logging.py: no change ./snakemake/modules.py: no change 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no change ./snakemake/common/typing.py: no change ./snakemake/common/workdir_handler.py: no change ./snakemake/common/tests/__init__.py: no change ./snakemake/common/tests/testcases/__init__.py: no change ./snakemake/common/tests/testcases/groups/__init__.py: no change ./snakemake/common/tests/testcases/simple/__init__.py: no change ./snakemake/deployment/__init__.py: no change ./snakemake/deployment/conda.py: no change ./snakemake/deployment/containerize.py: no change ./snakemake/deployment/env_modules.py: no change ./snakemake/deployment/singularity.py: no change ./snakemake/executors/__init__.py: no change ./snakemake/executors/dryrun.py: no change ./snakemake/executors/google_lifesciences_helper.py: updating ./snakemake/executors/local.py: no change ./snakemake/executors/touch.py: no change ./snakemake/linting/__init__.py: no change ./snakemake/linting/links.py: no change ./snakemake/linting/rules.py: no change ./snakemake/linting/snakefiles.py: no change ./snakemake/remote/AzBlob.py: no change ./snakemake/remote/EGA.py: no change ./snakemake/remote/FTP.py: no change ./snakemake/remote/GS.py: no change ./snakemake/remote/HTTP.py: no change ./snakemake/remote/NCBI.py: no change ./snakemake/remote/S3.py: no change ./snakemake/remote/S3Mocked.py: no change ./snakemake/remote/SFTP.py: no change ./snakemake/remote/XRootD.py: no change ./snakemake/remote/__init__.py: no change ./snakemake/remote/dropbox.py: no change ./snakemake/remote/gfal.py: no change ./snakemake/remote/gridftp.py: no change ./snakemake/remote/iRODS.py: no change ./snakemake/remote/webdav.py: no change ./snakemake/remote/zenodo.py: no change ./snakemake/report/__init__.py: no change ./snakemake/report/common.py: no change ./snakemake/report/rulegraph_spec.py: no change ./snakemake/report/html_reporter/__init__.py: no change ./snakemake/report/html_reporter/common.py: no change ./snakemake/report/html_reporter/data/__init__.py: no change 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./snakemake/template_rendering/yte.py: no change ./snakemake/unit_tests/__init__.py: no change ./snakemake/unit_tests/templates/__init__.py: no change ./tests/__init__.py: no change ./tests/common.py: no change ./tests/conftest.py: no change ./tests/test_api.py: no change ./tests/test_args.py: no change ./tests/test_executor_test_suite.py: no change ./tests/test_expand.py: no change ./tests/test_io.py: no change ./tests/test_linting.py: no change ./tests/test_persistence.py: no change ./tests/test_schema.py: no change ./tests/test_script.py: no change ./tests/testapi.py: no change ./tests/tests.py: no change ./tests/test_benchmark/script.py: updating ./tests/test_benchmark_jsonl/script.py: updating ./tests/test_conda_python_3_7_script/test_script.py: no change ./tests/test_conda_python_script/test_script.py: no change ./tests/test_deploy_sources/scripts/test.py: no change ./tests/test_filegraph/scripts/vis.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_a.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_all.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_b.py: no change ./tests/test_get_log_both/wrapper.py: no change ./tests/test_get_log_complex/wrapper.py: no change ./tests/test_get_log_none/wrapper.py: no change ./tests/test_get_log_stderr/wrapper.py: no change ./tests/test_get_log_stdout/wrapper.py: no change ./tests/test_github_issue1158/qsub.py: updating ./tests/test_github_issue627/job.py: updating ./tests/test_github_issue_14/local_script.py: no change ./tests/test_github_issue_14/pythonTest.py: updating ./tests/test_handover/script.py: no change ./tests/test_issue1046/my_wrapper/wrapper.py: no change ./tests/test_issue916/local_script.py: no change ./tests/test_issue916/pythonTest.py: updating ./tests/test_job_properties/qsub.py: updating ./tests/test_local_import/bar.py: no change ./tests/test_local_import/foo/__init__.py: no change ./tests/test_paramspace/scripts/simulate.py: no change ./tests/test_paramspace_single_wildcard/scripts/simulate.py: no change ./tests/test_pipes/producer.py: no change ./tests/test_prebuilt_conda_script/test.py: no change ./tests/test_prebuilt_conda_script/dummy_package/src/dummy/__init__.py: no change ./tests/test_prebuilt_conda_script/dummy_package/src/dummy/dummy.py: no change ./tests/test_report_display_code/test.py: no change ./tests/test_restartable_job_cmd_exit_1/qsub.py: updating ./tests/test_restartable_job_qsub_exit_1/qsub.py: updating ./tests/test_script/scripts/test.py: no change ./tests/test_script_pre_py39/script.py: no change ./tests/test_script_py/scripts/test.py: no change ./tests/test_script_py/scripts/test_explicit_import.py: no change ./tests/test_singularity/script.py: no change ./tests/test_singularity_module/script.py: no change ./tests/test_string_resources/qsub.py: updating ./tests/test_tibanna/cleanup.py: no change ./tests/test_tibanna/scripts/step2.py: no change recursedown('./tests/test_wildcard_keyword/expected-results') recursedown('./tests/test_workflow_profile') recursedown('./tests/test_workflow_profile/dummy-general-profile') recursedown('./tests/test_workflow_profile/expected-results') recursedown('./tests/test_workflow_profile/workflow') recursedown('./tests/test_workflow_profile/workflow/profiles') recursedown('./tests/test_workflow_profile/workflow/profiles/default') recursedown('./tests/test_wrapper') recursedown('./tests/test_wrapper/expected-results') recursedown('./tests/test_xrootd') recursedown('./tests/test_yaml_config') recursedown('./tests/test_yaml_config/expected-results') + sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py + for editor in nano vim + cp -vp misc/nano/README.md README-nano.md 'misc/nano/README.md' -> 'README-nano.md' + for editor in nano vim + cp -vp misc/vim/README.md README-vim.md 'misc/vim/README.md' -> 'README-vim.md' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.D2LdYN + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement not satisfied: wheel Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 836.3 KiB/s | 25.9 KiB | 00m00s Copr repository 100% | 80.7 KiB/s | 1.5 KiB | 00m00s updates 100% | 520.6 KiB/s | 28.6 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed. Package "graphviz-12.1.0-1.fc41.x86_64" is already installed. Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc41.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc41.noarch" is already installed. Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed. Package "python3-boto3-1.35.37-1.fc41.noarch" is already installed. Package "python3-flask-1:3.0.3-8.fc41.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pytest-8.3.1-2.fc41.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-9.fc41.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc41.noarch" is already installed. Package "strace-6.10-1.fc41.x86_64" is already installed. Package "stress-1.0.7-5.fc41.x86_64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc41.noarch" is already installed. Total size of inbound packages is 3 MiB. Need to download 3 MiB. Package Arch Version Repository Size Installing: python3-pip noarch 24.2-2.fc41 copr_base 11.4 MiB python3-wheel noarch 1:0.43.0-4.fc41 fedora 516.1 KiB Transaction Summary: Installing: 2 packages After this operation, 12 MiB extra will be used (install 12 MiB, remove 0 B). [1/2] python3-wheel-1:0.43.0-4.fc41.noa 100% | 10.8 MiB/s | 165.8 KiB | 00m00s [2/2] python3-pip-0:24.2-2.fc41.noarch 100% | 125.3 MiB/s | 2.5 MiB | 00m00s -------------------------------------------------------------------------------- [2/2] Total 100% | 21.3 MiB/s | 2.7 MiB | 00m00s Running transaction [1/4] Verify package files 100% | 222.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 76.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.43.0 100% | 104.5 MiB/s | 535.1 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [4/4] Installing python3-pip-0:24.2-2.f 100% | 145.7 MiB/s | 11.7 MiB | 00m00s Warning: skipped PGP checks for 1 package from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.WxNhCd + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: appdirs Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: immutables Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: connection-pool >=0.0.3 Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: datrie Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: docutils Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: gitpython Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: humanfriendly Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: jsonschema Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: nbformat Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: psutil Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pulp <2.10,>=2.3.1 Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pyyaml Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: smart-open <8.0,>=4.0 Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: stopit Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: tabulate Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: toposort <2.0,>=1.10 Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: yte <2.0,>=1.5.1 Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: dpath <3.0.0,>=2.1.6 Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: conda-inject <2.0,>=1.3.1 Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: slack-sdk ; extra == 'messaging' Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pygments ; extra == 'reports' + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: updates 100% | 180.1 KiB/s | 28.6 KiB | 00m00s Copr repository 100% | 109.5 KiB/s | 1.5 KiB | 00m00s fedora 100% | 172.8 KiB/s | 25.9 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed. Package "graphviz-12.1.0-1.fc41.x86_64" is already installed. Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc41.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc41.noarch" is already installed. Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed. Package "python3-boto3-1.35.37-1.fc41.noarch" is already installed. Package "python3-configargparse-1.7-5.fc41.noarch" is already installed. Package "python3-flask-1:3.0.3-8.fc41.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pip-24.2-2.fc41.noarch" is already installed. Package "python3-pytest-8.3.1-2.fc41.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-reretry-0.11.8-11.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-9.fc41.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc41.noarch" is already installed. Package "python3-throttler-1.2.2-11.fc41.noarch" is already installed. Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed. Package "python3-wrapt-1.16.0-6.fc41.x86_64" is already installed. Package "strace-6.10-1.fc41.x86_64" is already installed. Package "stress-1.0.7-5.fc41.x86_64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc41.noarch" is already installed. Package Arch Version Repository Size Installing: python3-GitPython noarch 3.1.40-6.fc41 fedora 1.7 MiB python3-appdirs noarch 1.4.4-23.fc41 fedora 68.7 KiB python3-conda-inject noarch 1.3.2-3.fc41 fedora 23.6 KiB python3-connection_pool noarch 0.0.3-13.fc41 fedora 21.2 KiB python3-datrie x86_64 0.8.2-27.fc41 fedora 444.7 KiB python3-docutils noarch 0.20.1-6.fc41 fedora 4.8 MiB python3-dpath noarch 2.2.0-2.fc41 fedora 93.3 KiB python3-humanfriendly noarch 10.0-13.fc41 copr_base 544.8 KiB python3-immutables x86_64 0.20-7.fc41 fedora 185.9 KiB python3-jsonschema noarch 4.19.1-6.fc41 fedora 850.0 KiB python3-nbformat noarch 5.9.2-6.fc41 copr_base 541.7 KiB python3-psutil x86_64 5.9.8-4.fc41 fedora 1.4 MiB python3-pulp noarch 2.8.0-6.fc41 fedora 1.0 MiB python3-pygments noarch 2.18.0-3.fc41 copr_base 10.6 MiB python3-pyyaml x86_64 6.0.1-18.fc41 fedora 791.1 KiB python3-slackclient noarch 3.33.1-1.fc41 copr_base 2.9 MiB python3-smart_open noarch 7.0.5-1.fc41 copr_base 494.1 KiB python3-snakemake-interface-report-plugins noarch 1.0.0-5.fc41 fedora 31.1 KiB python3-stopit noarch 1.1.2-12.fc41 fedora 65.2 KiB python3-tabulate noarch 0.9.0-10.fc41 fedora 342.0 KiB python3-toposort noarch 1.10-12.fc41 fedora 28.5 KiB python3-yte noarch 1.5.4-6.fc41 fedora 61.0 KiB Installing dependencies: git-core x86_64 2.47.0-1.fc41 fedora 22.5 MiB libcbor x86_64 0.11.0-2.fc41 fedora 73.9 KiB libedit x86_64 3.1-53.20240808cvs.fc41 fedora 244.1 KiB libfido2 x86_64 1.15.0-2.fc41 fedora 238.2 KiB libyaml x86_64 0.2.5-15.fc41 fedora 134.4 KiB openssh x86_64 9.8p1-3.fc41.1 fedora 1.8 MiB openssh-clients x86_64 9.8p1-3.fc41.1 fedora 2.6 MiB python3-attrs noarch 24.2.0-1.fc41 copr_base 396.1 KiB python3-boto noarch 2.49.0-23.fc41 fedora 9.6 MiB python3-fastjsonschema noarch 2.20.0-1.fc41 copr_base 190.8 KiB python3-gitdb noarch 4.0.11-1.fc41 copr_base 504.2 KiB python3-jsonschema-specifications noarch 2023.11.2-6.fc41 copr_base 45.8 KiB python3-jupyter-core noarch 5.7.2-4.fc41 copr_base 198.7 KiB python3-plac noarch 1.4.3-4.fc41 fedora 230.2 KiB python3-referencing noarch 0.35.1-3.fc41 fedora 326.0 KiB python3-rpds-py x86_64 0.20.0-2.fc41 copr_base 696.6 KiB python3-smmap noarch 5.0.1-1.fc41 copr_base 200.0 KiB python3-traitlets noarch 5.14.3-3.fc41 fedora 966.9 KiB python3-zombie-imp noarch 0.0.2-7.fc41 fedora 58.4 KiB Transaction Summary: Installing: 41 packages Total size of inbound packages is 15 MiB. Need to download 15 MiB. After this operation, 68 MiB extra will be used (install 68 MiB, remove 0 B). [ 1/41] python3-conda-inject-0:1.3.2-3. 100% | 781.7 KiB/s | 18.8 KiB | 00m00s [ 2/41] python3-pulp-0:2.8.0-6.fc41.noa 100% | 8.4 MiB/s | 248.1 KiB | 00m00s [ 3/41] python3-dpath-0:2.2.0-2.fc41.no 100% | 1.4 MiB/s | 42.9 KiB | 00m00s [ 4/41] python3-appdirs-0:1.4.4-23.fc41 100% | 7.7 MiB/s | 23.5 KiB | 00m00s [ 5/41] python3-toposort-0:1.10-12.fc41 100% | 1.2 MiB/s | 20.3 KiB | 00m00s [ 6/41] python3-connection_pool-0:0.0.3 100% | 1.3 MiB/s | 17.1 KiB | 00m00s [ 7/41] python3-docutils-0:0.20.1-6.fc4 100% | 88.2 MiB/s | 1.1 MiB | 00m00s [ 8/41] python3-jsonschema-0:4.19.1-6.f 100% | 49.9 MiB/s | 204.2 KiB | 00m00s [ 9/41] python3-psutil-0:5.9.8-4.fc41.x 100% | 66.4 MiB/s | 271.9 KiB | 00m00s [10/41] python3-pyyaml-0:6.0.1-18.fc41. 100% | 56.5 MiB/s | 231.6 KiB | 00m00s [11/41] python3-GitPython-0:3.1.40-6.fc 100% | 25.4 MiB/s | 389.8 KiB | 00m00s [12/41] python3-stopit-0:1.1.2-12.fc41. 100% | 2.1 MiB/s | 25.6 KiB | 00m00s [13/41] python3-snakemake-interface-rep 100% | 2.3 MiB/s | 26.2 KiB | 00m00s [14/41] python3-yte-0:1.5.4-6.fc41.noar 100% | 2.3 MiB/s | 36.0 KiB | 00m00s [15/41] python3-smart_open-0:7.0.5-1.fc 100% | 4.3 MiB/s | 119.1 KiB | 00m00s [16/41] python3-datrie-0:0.8.2-27.fc41. 100% | 14.0 MiB/s | 158.1 KiB | 00m00s [17/41] python3-immutables-0:0.20-7.fc4 100% | 5.7 MiB/s | 64.1 KiB | 00m00s [18/41] python3-pygments-0:2.18.0-3.fc4 100% | 157.9 MiB/s | 2.4 MiB | 00m00s [19/41] python3-nbformat-0:5.9.2-6.fc41 100% | 1.1 MiB/s | 123.4 KiB | 00m00s [20/41] python3-humanfriendly-0:10.0-13 100% | 1.2 MiB/s | 138.2 KiB | 00m00s [21/41] git-core-0:2.47.0-1.fc41.x86_64 100% | 240.8 MiB/s | 4.8 MiB | 00m00s [22/41] python3-tabulate-0:0.9.0-10.fc4 100% | 3.2 MiB/s | 71.8 KiB | 00m00s [23/41] libyaml-0:0.2.5-15.fc41.x86_64 100% | 19.3 MiB/s | 59.4 KiB | 00m00s [24/41] python3-plac-0:1.4.3-4.fc41.noa 100% | 2.7 MiB/s | 62.6 KiB | 00m00s [25/41] python3-slackclient-0:3.33.1-1. 100% | 3.6 MiB/s | 504.8 KiB | 00m00s [26/41] openssh-clients-0:9.8p1-3.fc41. 100% | 181.1 MiB/s | 741.7 KiB | 00m00s [27/41] libedit-0:3.1-53.20240808cvs.fc 100% | 25.8 MiB/s | 105.6 KiB | 00m00s [28/41] libfido2-0:1.15.0-2.fc41.x86_64 100% | 24.0 MiB/s | 98.1 KiB | 00m00s [29/41] openssh-0:9.8p1-3.fc41.1.x86_64 100% | 134.9 MiB/s | 414.3 KiB | 00m00s [30/41] libcbor-0:0.11.0-2.fc41.x86_64 100% | 10.8 MiB/s | 33.1 KiB | 00m00s [31/41] python3-attrs-0:24.2.0-1.fc41.n 100% | 57.9 MiB/s | 118.6 KiB | 00m00s [32/41] python3-jsonschema-specificatio 100% | 5.3 MiB/s | 21.8 KiB | 00m00s [33/41] python3-referencing-0:0.35.1-3. 100% | 27.6 MiB/s | 84.9 KiB | 00m00s [34/41] python3-rpds-py-0:0.20.0-2.fc41 100% | 47.6 MiB/s | 292.4 KiB | 00m00s [35/41] python3-boto-0:2.49.0-23.fc41.n 100% | 21.3 MiB/s | 1.9 MiB | 00m00s [36/41] python3-gitdb-0:4.0.11-1.fc41.n 100% | 1.1 MiB/s | 130.9 KiB | 00m00s [37/41] python3-traitlets-0:5.14.3-3.fc 100% | 34.8 MiB/s | 214.0 KiB | 00m00s [38/41] python3-fastjsonschema-0:2.20.0 100% | 504.7 KiB/s | 59.0 KiB | 00m00s [39/41] python3-zombie-imp-0:0.0.2-7.fc 100% | 2.4 MiB/s | 29.5 KiB | 00m00s [40/41] python3-smmap-0:5.0.1-1.fc41.no 100% | 622.1 KiB/s | 56.6 KiB | 00m00s [41/41] python3-jupyter-core-0:5.7.2-4. 100% | 411.0 KiB/s | 71.9 KiB | 00m00s -------------------------------------------------------------------------------- [41/41] Total 100% | 24.5 MiB/s | 15.3 MiB | 00m01s Running transaction [ 1/43] Verify package files 100% | 891.0 B/s | 41.0 B | 00m00s [ 2/43] Prepare transaction 100% | 706.0 B/s | 41.0 B | 00m00s [ 3/43] Installing python3-traitlets-0: 100% | 240.2 MiB/s | 984.0 KiB | 00m00s [ 4/43] Installing python3-rpds-py-0:0. 100% | 342.1 MiB/s | 700.6 KiB | 00m00s [ 5/43] Installing python3-attrs-0:24.2 100% | 200.5 MiB/s | 410.7 KiB | 00m00s [ 6/43] Installing python3-referencing- 100% | 327.8 MiB/s | 335.6 KiB | 00m00s [ 7/43] Installing python3-jsonschema-s 100% | 53.9 MiB/s | 55.1 KiB | 00m00s [ 8/43] Installing python3-jsonschema-0 100% | 283.3 MiB/s | 870.3 KiB | 00m00s [ 9/43] Installing python3-jupyter-core 100% | 202.6 MiB/s | 207.5 KiB | 00m00s [10/43] Installing python3-zombie-imp-0 100% | 20.3 MiB/s | 62.4 KiB | 00m00s [11/43] Installing python3-boto-0:2.49. 100% | 259.8 MiB/s | 9.9 MiB | 00m00s [12/43] Installing python3-smmap-0:5.0. 100% | 202.8 MiB/s | 207.7 KiB | 00m00s [13/43] Installing python3-gitdb-0:4.0. 100% | 169.5 MiB/s | 520.6 KiB | 00m00s [14/43] Installing python3-fastjsonsche 100% | 194.1 MiB/s | 198.8 KiB | 00m00s [15/43] Installing libcbor-0:0.11.0-2.f 100% | 73.5 MiB/s | 75.3 KiB | 00m00s [16/43] Installing libfido2-0:1.15.0-2. 100% | 234.1 MiB/s | 239.7 KiB | 00m00s [17/43] Installing openssh-0:9.8p1-3.fc 100% | 444.6 MiB/s | 1.8 MiB | 00m00s [18/43] Installing libedit-0:3.1-53.202 100% | 240.0 MiB/s | 245.8 KiB | 00m00s [19/43] Installing openssh-clients-0:9. 100% | 136.6 MiB/s | 2.6 MiB | 00m00s [20/43] Installing git-core-0:2.47.0-1. 100% | 490.2 MiB/s | 22.6 MiB | 00m00s [21/43] Installing python3-plac-0:1.4.3 100% | 228.2 MiB/s | 233.7 KiB | 00m00s [22/43] Installing libyaml-0:0.2.5-15.f 100% | 132.6 MiB/s | 135.8 KiB | 00m00s [23/43] Installing python3-pyyaml-0:6.0 100% | 262.0 MiB/s | 804.9 KiB | 00m00s [24/43] Installing python3-dpath-0:2.2. 100% | 96.7 MiB/s | 99.0 KiB | 00m00s [25/43] Installing python3-yte-0:1.5.4- 100% | 64.8 MiB/s | 66.3 KiB | 00m00s [26/43] Installing python3-conda-inject 100% | 25.7 MiB/s | 26.3 KiB | 00m00s [27/43] Installing python3-GitPython-0: 100% | 288.4 MiB/s | 1.7 MiB | 00m00s [28/43] Installing python3-nbformat-0:5 100% | 139.1 MiB/s | 569.9 KiB | 00m00s [29/43] Installing python3-smart_open-0 100% | 247.2 MiB/s | 506.4 KiB | 00m00s [30/43] Installing python3-tabulate-0:0 100% | 168.7 MiB/s | 345.5 KiB | 00m00s [31/43] Installing python3-slackclient- 100% | 190.3 MiB/s | 3.0 MiB | 00m00s [32/43] Installing python3-pygments-0:2 100% | 338.8 MiB/s | 10.8 MiB | 00m00s [33/43] Installing python3-immutables-0 100% | 187.4 MiB/s | 191.9 KiB | 00m00s [34/43] Installing python3-humanfriendl 100% | 271.6 MiB/s | 556.3 KiB | 00m00s [35/43] Installing python3-datrie-0:0.8 100% | 436.3 MiB/s | 446.8 KiB | 00m00s [36/43] Installing python3-snakemake-in 100% | 37.4 MiB/s | 38.3 KiB | 00m00s [37/43] Installing python3-stopit-0:1.1 100% | 67.9 MiB/s | 69.5 KiB | 00m00s [38/43] Installing python3-psutil-0:5.9 100% | 360.9 MiB/s | 1.4 MiB | 00m00s [39/43] Installing python3-docutils-0:0 100% | 288.8 MiB/s | 4.9 MiB | 00m00s [40/43] Installing python3-connection_p 100% | 0.0 B/s | 23.8 KiB | 00m00s [41/43] Installing python3-appdirs-0:1. 100% | 0.0 B/s | 70.9 KiB | 00m00s [42/43] Installing python3-toposort-0:1 100% | 0.0 B/s | 30.9 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [43/43] Installing python3-pulp-0:2.8.0 100% | 20.4 MiB/s | 1.1 MiB | 00m00s Warning: skipped PGP checks for 12 packages from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.zv6kfd + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.20) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.2) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.8) Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.10,>=2.3.1 (installed: pulp 2.8.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open <8.0,>=4.0 (installed: smart-open 7.0.5) Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 (installed: snakemake-interface-report-plugins 1.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort <2.0,>=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.2.0) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.2) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.33.1) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.18.0) + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: updates 100% | 107.2 KiB/s | 28.6 KiB | 00m00s Copr repository 100% | 127.8 KiB/s | 1.5 KiB | 00m00s fedora 100% | 454.9 KiB/s | 25.9 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed. Package "graphviz-12.1.0-1.fc41.x86_64" is already installed. Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc41.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc41.noarch" is already installed. Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed. Package "python3-appdirs-1.4.4-23.fc41.noarch" is already installed. Package "python3-boto3-1.35.37-1.fc41.noarch" is already installed. Package "python3-configargparse-1.7-5.fc41.noarch" is already installed. Package "python3-connection_pool-0.0.3-13.fc41.noarch" is already installed. Package "python3-datrie-0.8.2-27.fc41.x86_64" is already installed. Package "python3-docutils-0.20.1-6.fc41.noarch" is already installed. Package "python3-flask-1:3.0.3-8.fc41.noarch" is already installed. Package "python3-GitPython-3.1.40-6.fc41.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-humanfriendly-10.0-13.fc41.noarch" is already installed. Package "python3-immutables-0.20-7.fc41.x86_64" is already installed. Package "python3-jsonschema-4.19.1-6.fc41.noarch" is already installed. Package "python3-nbformat-5.9.2-6.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pip-24.2-2.fc41.noarch" is already installed. Package "python3-psutil-5.9.8-4.fc41.x86_64" is already installed. Package "python3-pygments-2.18.0-3.fc41.noarch" is already installed. Package "python3-pytest-8.3.1-2.fc41.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-pyyaml-6.0.1-18.fc41.x86_64" is already installed. Package "python3-reretry-0.11.8-11.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-9.fc41.noarch" is already installed. Package "python3-slackclient-3.33.1-1.fc41.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc41.noarch" is already installed. Package "python3-stopit-1.1.2-12.fc41.noarch" is already installed. Package "python3-tabulate-0.9.0-10.fc41.noarch" is already installed. Package "python3-throttler-1.2.2-11.fc41.noarch" is already installed. Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed. Package "python3-wrapt-1.16.0-6.fc41.x86_64" is already installed. Package "strace-6.10-1.fc41.x86_64" is already installed. Package "stress-1.0.7-5.fc41.x86_64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc41.noarch" is already installed. Nothing to do. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.5kJBkR + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.20) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.2) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.8) Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.10,>=2.3.1 (installed: pulp 2.8.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open <8.0,>=4.0 (installed: smart-open 7.0.5) Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 (installed: snakemake-interface-report-plugins 1.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort <2.0,>=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.2.0) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.2) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.33.1) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.18.0) + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.iIbvbV + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir Processing /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info writing /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-wflivjos/snakemake-8.18.2.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: snakemake Building wheel for snakemake (pyproject.toml): started Running command Building wheel for snakemake (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/storage.py -> build/lib/snakemake copying snakemake/spawn_jobs.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/profiles.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/ioutils.py -> build/lib/snakemake copying snakemake/ioflags.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/cli.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/api.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/settings copying snakemake/settings/types.py -> build/lib/snakemake/settings copying snakemake/settings/enums.py -> build/lib/snakemake/settings copying snakemake/settings/__init__.py -> build/lib/snakemake/settings creating build/lib/snakemake/script copying snakemake/script/__init__.py -> build/lib/snakemake/script creating build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report copying snakemake/report/common.py -> build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report creating build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote creating build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting creating build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors copying snakemake/executors/touch.py -> build/lib/snakemake/executors copying snakemake/executors/local.py -> build/lib/snakemake/executors copying snakemake/executors/dryrun.py -> build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors creating build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment creating build/lib/snakemake/common copying snakemake/common/workdir_handler.py -> build/lib/snakemake/common copying snakemake/common/typing.py -> build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/git.py -> build/lib/snakemake/common copying snakemake/common/configfile.py -> build/lib/snakemake/common copying snakemake/common/argparse.py -> build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common creating build/lib/snakemake/caching copying snakemake/caching/storage.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates creating build/lib/snakemake/report/html_reporter copying snakemake/report/html_reporter/common.py -> build/lib/snakemake/report/html_reporter copying snakemake/report/html_reporter/__init__.py -> build/lib/snakemake/report/html_reporter creating build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/__init__.py -> build/lib/snakemake/report/html_reporter/template creating build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/timeline.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/runtimes.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/rules.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/rulegraph.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/results.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/packages.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/configfiles.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/common.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/categories.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/__init__.py -> build/lib/snakemake/report/html_reporter/data creating build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/__init__.py -> build/lib/snakemake/report/html_reporter/template/components creating build/lib/snakemake/common/tests copying snakemake/common/tests/__init__.py -> build/lib/snakemake/common/tests creating build/lib/snakemake/common/tests/testcases copying snakemake/common/tests/testcases/__init__.py -> build/lib/snakemake/common/tests/testcases creating build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/simple/__init__.py -> build/lib/snakemake/common/tests/testcases/simple creating build/lib/snakemake/common/tests/testcases/groups copying snakemake/common/tests/testcases/groups/__init__.py -> build/lib/snakemake/common/tests/testcases/groups copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/report/html_reporter/template/style.css -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/index.html.jinja2 -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/logo.svg -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/components/subcategory.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/stats.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/search_results.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/rule_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/rule_graph.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/result_view_button.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/result_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/report_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/navbar.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/menu.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/list_item.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/list_heading.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/icon.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/content.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/common.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/category.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/button.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/app.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/abstract_results.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/abstract_menu.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/common/tests/testcases/simple/Snakefile -> build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/groups/Snakefile -> build/lib/snakemake/common/tests/testcases/groups UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '8.18.2' installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/_version.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/gui.html -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/report.css -> build/bdist.linux-x86_64/wheel/snakemake creating build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/storage.py -> build/bdist.linux-x86_64/wheel/snakemake/caching creating build/bdist.linux-x86_64/wheel/snakemake/common creating build/bdist.linux-x86_64/wheel/snakemake/common/tests creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/Snakefile -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/Snakefile -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases copying build/lib/snakemake/common/tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/argparse.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/configfile.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/git.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/typing.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/workdir_handler.py -> build/bdist.linux-x86_64/wheel/snakemake/common creating build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment creating build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/dryrun.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/local.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/touch.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-x86_64/wheel/snakemake/executors creating build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-x86_64/wheel/snakemake/linting creating build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-x86_64/wheel/snakemake/remote creating build/bdist.linux-x86_64/wheel/snakemake/report creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/categories.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/configfiles.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/packages.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/results.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/rulegraph.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/runtimes.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/timeline.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/logo.svg -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/index.html.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/style.css -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/app.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/category.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/common.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/content.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/icon.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/list_heading.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/list_item.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/navbar.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/report_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/result_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/result_view_button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/rule_graph.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/rule_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/search_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/stats.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/subcategory.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter copying build/lib/snakemake/report/html_reporter/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report copying build/lib/snakemake/report/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-x86_64/wheel/snakemake/report creating build/bdist.linux-x86_64/wheel/snakemake/script copying build/lib/snakemake/script/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/script creating build/bdist.linux-x86_64/wheel/snakemake/settings copying build/lib/snakemake/settings/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/settings copying build/lib/snakemake/settings/enums.py -> build/bdist.linux-x86_64/wheel/snakemake/settings copying build/lib/snakemake/settings/types.py -> build/bdist.linux-x86_64/wheel/snakemake/settings creating build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests copying build/lib/snakemake/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/__main__.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/api.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/cli.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/exceptions.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/io.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ioflags.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ioutils.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/profiles.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/spawn_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/storage.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/wrapper.py -> build/bdist.linux-x86_64/wheel/snakemake running install_egg_info running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to build/bdist.linux-x86_64/wheel/snakemake-8.18.2-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/snakemake-8.18.2.dist-info/WHEEL creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-wheel-m967zsbs/.tmp-97buspi9/snakemake-8.18.2-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/api.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cli.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.html' adding 'snakemake/gui.py' adding 'snakemake/io.py' adding 'snakemake/ioflags.py' adding 'snakemake/ioutils.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/profiles.py' adding 'snakemake/report.css' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/spawn_jobs.py' adding 'snakemake/storage.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/storage.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/argparse.py' adding 'snakemake/common/configfile.py' adding 'snakemake/common/git.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/common/typing.py' adding 'snakemake/common/workdir_handler.py' adding 'snakemake/common/tests/__init__.py' adding 'snakemake/common/tests/testcases/__init__.py' adding 'snakemake/common/tests/testcases/groups/Snakefile' adding 'snakemake/common/tests/testcases/groups/__init__.py' adding 'snakemake/common/tests/testcases/simple/Snakefile' adding 'snakemake/common/tests/testcases/simple/__init__.py' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/dryrun.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/jobscript.sh' adding 'snakemake/executors/local.py' adding 'snakemake/executors/touch.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/common.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/html_reporter/__init__.py' adding 'snakemake/report/html_reporter/common.py' adding 'snakemake/report/html_reporter/data/__init__.py' adding 'snakemake/report/html_reporter/data/categories.py' adding 'snakemake/report/html_reporter/data/common.py' adding 'snakemake/report/html_reporter/data/configfiles.py' adding 'snakemake/report/html_reporter/data/packages.py' adding 'snakemake/report/html_reporter/data/results.py' adding 'snakemake/report/html_reporter/data/rulegraph.py' adding 'snakemake/report/html_reporter/data/rules.py' adding 'snakemake/report/html_reporter/data/runtimes.py' adding 'snakemake/report/html_reporter/data/timeline.py' adding 'snakemake/report/html_reporter/template/__init__.py' adding 'snakemake/report/html_reporter/template/index.html.jinja2' adding 'snakemake/report/html_reporter/template/logo.svg' adding 'snakemake/report/html_reporter/template/style.css' adding 'snakemake/report/html_reporter/template/components/__init__.py' adding 'snakemake/report/html_reporter/template/components/abstract_menu.js' adding 'snakemake/report/html_reporter/template/components/abstract_results.js' adding 'snakemake/report/html_reporter/template/components/app.js' adding 'snakemake/report/html_reporter/template/components/breadcrumbs.js' adding 'snakemake/report/html_reporter/template/components/button.js' adding 'snakemake/report/html_reporter/template/components/category.js' adding 'snakemake/report/html_reporter/template/components/common.js' adding 'snakemake/report/html_reporter/template/components/content.js' adding 'snakemake/report/html_reporter/template/components/icon.js' adding 'snakemake/report/html_reporter/template/components/list_heading.js' adding 'snakemake/report/html_reporter/template/components/list_item.js' adding 'snakemake/report/html_reporter/template/components/menu.js' adding 'snakemake/report/html_reporter/template/components/navbar.js' adding 'snakemake/report/html_reporter/template/components/report_info.js' adding 'snakemake/report/html_reporter/template/components/result_info.js' adding 'snakemake/report/html_reporter/template/components/result_view_button.js' adding 'snakemake/report/html_reporter/template/components/rule_graph.js' adding 'snakemake/report/html_reporter/template/components/rule_info.js' adding 'snakemake/report/html_reporter/template/components/search_results.js' adding 'snakemake/report/html_reporter/template/components/stats.js' adding 'snakemake/report/html_reporter/template/components/subcategory.js' adding 'snakemake/script/__init__.py' adding 'snakemake/settings/__init__.py' adding 'snakemake/settings/enums.py' adding 'snakemake/settings/types.py' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-8.18.2.dist-info/LICENSE.md' adding 'snakemake-8.18.2.dist-info/METADATA' adding 'snakemake-8.18.2.dist-info/WHEEL' adding 'snakemake-8.18.2.dist-info/entry_points.txt' adding 'snakemake-8.18.2.dist-info/top_level.txt' adding 'snakemake-8.18.2.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for snakemake (pyproject.toml): finished with status 'done' Created wheel for snakemake: filename=snakemake-8.18.2-py3-none-any.whl size=307215 sha256=e7928577a93bbff5a75f75ed340e2ce0260eeb12d89bc27dd363cb1133554b3d Stored in directory: /builddir/.cache/pip/wheels/b4/a9/cd/2536f65abc896962a23d47538f30fe428d1ceaa067828ea33b Successfully built snakemake + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.zhhVdC + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + '[' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build + mkdir /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 ++ ls /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir/snakemake-8.18.2-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=snakemake==8.18.2 + '[' -z snakemake==8.18.2 ']' + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir snakemake==8.18.2 Using pip 24.2 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir Processing ./pyproject-wheeldir/snakemake-8.18.2-py3-none-any.whl Installing collected packages: snakemake Creating /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin changing mode of /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake to 755 Successfully installed snakemake-8.18.2 + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake: updating + rm -rfv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --record /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD removed '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD' + rm -fv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/REQUESTED removed '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-files --output-modules /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-record --prefix /usr -l snakemake + install -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/man/man1 + PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + help2man --no-info '--name=Metapackage for snakemake: messaging extras' snakemake + install -t /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc + install -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles + cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles 'misc/vim/README.md' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/README.md' 'misc/vim/ftdetect' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect' 'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect/snakemake.vim' 'misc/vim/ftplugin' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin' 'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake' 'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim' 'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim' 'misc/vim/syntax' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/syntax' 'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/syntax/snakemake.vim' + find /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/README.md + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/scheduler.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/storage.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/target_jobs.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/persistence.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ruleinfo.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/persistence.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/shell.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/shell.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/path_modifier.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/path_modifier.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/decorators.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/profiles.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/parser.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/parser.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ioutils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/resources.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/output_index.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ioflags.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/notebook.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/notebook.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/jobs.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/io.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/modules.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/logging.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/jobs.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/io.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/dag.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/gui.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/cwl.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/exceptions.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/cli.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/cli.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/api.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/checkpoints.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/_version.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/__main__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/unit_tests/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/unit_tests/templates/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/yte.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/jinja2.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/benchmark.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/enums.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/types.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/types.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/common.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/script/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/script/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/rulegraph_spec.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/__pycache__/common.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/template/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/template/components/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/timeline.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/runtimes.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/rules.cpython-313.opt-1.pyc: rewriting 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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/configfiles.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/packages.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/common.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/iRODS.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/gridftp.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/gfal.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/zenodo.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/XRootD.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/dropbox.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/webdav.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/SFTP.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/S3Mocked.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/FTP.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/EGA.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/S3.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/AzBlob.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/NCBI.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/HTTP.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/GS.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/linting/__pycache__/links.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/linting/__pycache__/rules.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/linting/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/touch.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/linting/__pycache__/snakefiles.cpython-313.opt-1.pyc: rewriting with normalized contents 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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/singularity.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/singularity.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/env_modules.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/containerize.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/workdir_handler.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/typing.cpython-313.opt-1.pyc: rewriting with normalized contents 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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/storage.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/dag.cpython-313.pyc: replacing with normalized version Scanned 59 directories and 368 files, processed 130 inodes, 129 modified (42 replaced + 87 rewritten), 0 unsupported format, 0 errors Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.K8tMUL + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 + '[' '!' -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + _PYTHONSITE=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-modules -e '*.tests*' -e snakemake.executors.flux Check import: snakemake Check import: snakemake.api Check import: snakemake.benchmark Check import: snakemake.caching Check import: snakemake.caching.hash Check import: snakemake.caching.local Check import: snakemake.caching.storage Check import: snakemake.checkpoints Check import: snakemake.cli Check import: snakemake.common Check import: snakemake.common.argparse Check import: snakemake.common.configfile Check import: snakemake.common.git Check import: snakemake.common.tbdstring Check import: snakemake.common.typing Check import: snakemake.common.workdir_handler Check import: snakemake.cwl Check import: snakemake.dag Check import: snakemake.decorators Check import: snakemake.deployment Check import: snakemake.deployment.conda Check import: snakemake.deployment.containerize Check import: snakemake.deployment.env_modules Check import: snakemake.deployment.singularity Check import: snakemake.exceptions Check import: snakemake.executors Check import: snakemake.executors.dryrun Check import: snakemake.executors.google_lifesciences_helper Check import: snakemake.executors.local Check import: snakemake.executors.touch Check import: snakemake.gui Check import: snakemake.io Check import: snakemake.ioflags Check import: snakemake.ioutils Check import: snakemake.jobs Check import: snakemake.linting Check import: snakemake.linting.links Check import: snakemake.linting.rules Check import: snakemake.linting.snakefiles Check import: snakemake.logging Check import: snakemake.modules Check import: snakemake.notebook Check import: snakemake.output_index Check import: snakemake.parser Check import: snakemake.path_modifier Check import: snakemake.persistence Check import: snakemake.profiles Check import: snakemake.remote Check import: snakemake.remote.AzBlob Check import: snakemake.remote.EGA Check import: snakemake.remote.FTP Check import: snakemake.remote.GS Check import: snakemake.remote.HTTP Check import: snakemake.remote.NCBI Check import: snakemake.remote.S3 Check import: snakemake.remote.S3Mocked Check import: snakemake.remote.SFTP Check import: snakemake.remote.XRootD Check import: snakemake.remote.dropbox Check import: snakemake.remote.gfal Check import: snakemake.remote.gridftp Check import: snakemake.remote.iRODS Check import: snakemake.remote.webdav Check import: snakemake.remote.zenodo Check import: snakemake.report Check import: snakemake.report.common Check import: snakemake.report.html_reporter Check import: snakemake.report.html_reporter.common Check import: snakemake.report.html_reporter.data Check import: snakemake.report.html_reporter.data.categories Check import: snakemake.report.html_reporter.data.common Check import: snakemake.report.html_reporter.data.configfiles Check import: snakemake.report.html_reporter.data.packages Check import: snakemake.report.html_reporter.data.results Check import: snakemake.report.html_reporter.data.rulegraph Check import: snakemake.report.html_reporter.data.rules Check import: snakemake.report.html_reporter.data.runtimes Check import: snakemake.report.html_reporter.data.timeline Check import: snakemake.report.html_reporter.template Check import: snakemake.report.html_reporter.template.components Check import: snakemake.report.rulegraph_spec Check import: snakemake.resources Check import: snakemake.ruleinfo Check import: snakemake.rules Check import: snakemake.scheduler Check import: snakemake.script Check import: snakemake.settings Check import: snakemake.settings.enums Check import: snakemake.settings.types Check import: snakemake.shell Check import: snakemake.sourcecache Check import: snakemake.spawn_jobs Check import: snakemake.storage Check import: snakemake.target_jobs Check import: snakemake.template_rendering Check import: snakemake.template_rendering.jinja2 Check import: snakemake.template_rendering.yte Check import: snakemake.unit_tests Check import: snakemake.unit_tests.templates Check import: snakemake.utils Check import: snakemake.workflow Check import: snakemake.wrapper + k='not test_ancient' + k='not test_ancient and not test_containerized' + k='not test_ancient and not test_containerized and not test_default_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper 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test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda and not test_group_job_resources_with_pipe' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest -v -k 'not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda and not test_group_job_resources_with_pipe' tests/tests.py tests/test_expand.py tests/test_io.py tests/test_schema.py tests/test_linting.py tests/test_executor_test_suite.py ============================= test session starts ============================== platform linux -- Python 3.13.0, pytest-8.3.1, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2 configfile: pyproject.toml plugins: mock-3.14.0 collecting ... collected 343 items / 60 deselected / 283 selected tests/tests.py::test_list_untracked PASSED [ 0%] tests/tests.py::test_delete_all_output PASSED [ 0%] tests/tests.py::test_github_issue_14 PASSED [ 1%] tests/tests.py::test_issue956 PASSED [ 1%] tests/tests.py::test01 PASSED [ 1%] tests/tests.py::test02 PASSED [ 2%] tests/tests.py::test03 PASSED [ 2%] tests/tests.py::test04 PASSED [ 2%] tests/tests.py::test05 PASSED [ 3%] tests/tests.py::test06 PASSED [ 3%] tests/tests.py::test07 PASSED [ 3%] tests/tests.py::test08 PASSED [ 4%] tests/tests.py::test09 PASSED [ 4%] tests/tests.py::test10 PASSED [ 4%] tests/tests.py::test11 PASSED [ 5%] tests/tests.py::test12 PASSED [ 5%] tests/tests.py::test13 PASSED [ 6%] tests/tests.py::test15 PASSED [ 6%] tests/tests.py::test_set_threads PASSED [ 6%] tests/tests.py::test_glpk_solver PASSED [ 7%] tests/tests.py::test_coin_solver PASSED [ 7%] tests/tests.py::test_directory PASSED [ 7%] tests/tests.py::test_directory2 PASSED [ 8%] tests/tests.py::test_set_resources_complex_profile PASSED [ 8%] tests/tests.py::test_set_resources_complex_cli PASSED [ 8%] tests/tests.py::test_params PASSED [ 9%] tests/tests.py::test_same_wildcard PASSED [ 9%] tests/tests.py::test_conditional PASSED [ 9%] tests/tests.py::test_unpack_dict PASSED [ 10%] tests/tests.py::test_unpack_list PASSED [ 10%] tests/tests.py::test_shell PASSED [ 10%] tests/tests.py::test_temp PASSED [ 11%] tests/tests.py::test_keyword_list PASSED [ 11%] tests/tests.py::test_globwildcards PASSED [ 12%] tests/tests.py::test_ioutils PASSED [ 12%] tests/tests.py::test_local_import PASSED [ 12%] tests/tests.py::test_ruledeps PASSED [ 13%] tests/tests.py::test_url_include SKIPPED (no internet connection) [ 13%] tests/tests.py::test_touch PASSED [ 13%] tests/tests.py::test_touch_flag_with_directories PASSED [ 14%] tests/tests.py::test_config PASSED [ 14%] tests/tests.py::test_update_config PASSED [ 14%] tests/tests.py::test_config_merging PASSED [ 15%] tests/tests.py::test_wildcard_keyword PASSED [ 15%] tests/tests.py::test_benchmark PASSED [ 15%] tests/tests.py::test_benchmark_jsonl PASSED [ 16%] tests/tests.py::test_temp_expand PASSED [ 16%] tests/tests.py::test_wildcard_count_ambiguity PASSED [ 16%] tests/tests.py::test_multiple_includes PASSED [ 17%] tests/tests.py::test_name_override PASSED [ 17%] tests/tests.py::test_yaml_config PASSED [ 18%] tests/tests.py::test_symlink_temp SKIPPED (This does not work reliab...) [ 18%] tests/tests.py::test_empty_include PASSED [ 18%] tests/tests.py::test_shadow PASSED [ 19%] tests/tests.py::test_shadow_copy PASSED [ 19%] tests/tests.py::test_shadow_prefix PASSED [ 19%] tests/tests.py::test_shadowed_log PASSED [ 20%] tests/tests.py::test_until PASSED [ 20%] tests/tests.py::test_omitfrom PASSED [ 20%] tests/tests.py::test_nonstr_params PASSED [ 21%] tests/tests.py::test_delete_output PASSED [ 21%] tests/tests.py::test_input_generator PASSED [ 21%] tests/tests.py::test_symlink_time_handling PASSED [ 22%] tests/tests.py::test_protected_symlink_output PASSED [ 22%] tests/tests.py::test_get_log_none PASSED [ 22%] tests/tests.py::test_get_log_both PASSED [ 23%] tests/tests.py::test_get_log_stderr PASSED [ 23%] tests/tests.py::test_get_log_stdout PASSED [ 24%] tests/tests.py::test_get_log_complex PASSED [ 24%] tests/tests.py::test_spaces_in_fnames PASSED [ 24%] tests/tests.py::test_deferred_func_eval PASSED [ 25%] tests/tests.py::test_format_params PASSED [ 25%] tests/tests.py::test_rule_defined_in_for_loop PASSED [ 25%] tests/tests.py::test_issue381 PASSED [ 26%] tests/tests.py::test_format_wildcards PASSED [ 26%] tests/tests.py::test_with_parentheses PASSED [ 26%] tests/tests.py::test_dup_out_patterns PASSED [ 27%] tests/tests.py::test_issue2826_failed_binary_logs PASSED [ 27%] tests/tests.py::test_threads PASSED [ 27%] tests/tests.py::test_threads0 PASSED [ 28%] tests/tests.py::test_run_namedlist PASSED [ 28%] tests/tests.py::test_profile PASSED [ 28%] tests/tests.py::test_singularity SKIPPED (no internet connection) [ 29%] tests/tests.py::test_singularity_cluster SKIPPED (no internet connec...) [ 29%] tests/tests.py::test_singularity_invalid PASSED [ 30%] tests/tests.py::test_singularity_module_invalid PASSED [ 30%] tests/tests.py::test_singularity_none SKIPPED (no internet connection) [ 30%] tests/tests.py::test_singularity_global SKIPPED (no internet connection) [ 31%] tests/tests.py::test_issue612 PASSED [ 31%] tests/tests.py::test_bash PASSED [ 31%] tests/tests.py::test_inoutput_is_path PASSED [ 32%] tests/tests.py::test_log_input PASSED [ 32%] tests/tests.py::test_issue805 PASSED [ 32%] tests/tests.py::test_issue823_1 PASSED [ 33%] tests/tests.py::test_issue823_2 PASSED [ 33%] tests/tests.py::test_issue823_3 PASSED [ 33%] tests/tests.py::test_pathlib PASSED [ 34%] tests/tests.py::test_pathlib_missing_file PASSED [ 34%] tests/tests.py::test_group_jobs PASSED [ 34%] tests/tests.py::test_group_jobs_attempts PASSED [ 35%] tests/tests.py::test_groups_out_of_jobs PASSED [ 35%] tests/tests.py::test_group_jobs_resources PASSED [ 36%] tests/tests.py::test_group_jobs_resources_with_max_threads PASSED [ 36%] tests/tests.py::test_group_jobs_resources_with_limited_resources PASSED [ 36%] tests/tests.py::test_global_resource_limits_limit_scheduling_of_groups PASSED [ 37%] tests/tests.py::test_new_resources_can_be_defined_as_local PASSED [ 37%] tests/tests.py::test_resources_can_be_overwritten_as_global PASSED [ 37%] tests/tests.py::test_scopes_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_resources_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_excluded_resources_not_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_multicomp_group_jobs PASSED [ 39%] tests/tests.py::test_group_job_fail PASSED [ 39%] tests/tests.py::test_pipes_simple PASSED [ 39%] tests/tests.py::test_pipes_multiple PASSED [ 40%] tests/tests.py::test_pipes_fail PASSED [ 40%] tests/tests.py::test_validate PASSED [ 40%] tests/tests.py::test_validate_fail PASSED [ 41%] tests/tests.py::test_issue854 PASSED [ 41%] tests/tests.py::test_issue850 PASSED [ 42%] tests/tests.py::test_issue860 PASSED [ 42%] tests/tests.py::test_issue894 PASSED [ 42%] tests/tests.py::test_issue584 PASSED [ 43%] tests/tests.py::test_issue912 PASSED [ 43%] tests/tests.py::test_job_properties PASSED [ 43%] tests/tests.py::test_issue916 PASSED [ 44%] tests/tests.py::test_issue930 PASSED [ 44%] tests/tests.py::test_convert_to_cwl SKIPPED (Temporarily disable unt...) [ 44%] tests/tests.py::test_issue1037 PASSED [ 45%] tests/tests.py::test_issue1046 PASSED [ 45%] tests/tests.py::test_checkpoints PASSED [ 45%] tests/tests.py::test_checkpoints_dir PASSED [ 46%] tests/tests.py::test_issue1092 PASSED [ 46%] tests/tests.py::test_issue958 PASSED [ 46%] tests/tests.py::test_issue471 PASSED [ 47%] tests/tests.py::test_issue1085 PASSED [ 47%] tests/tests.py::test_pipes2 PASSED [ 48%] tests/tests.py::test_expand_flag PASSED [ 48%] tests/tests.py::test_default_resources PASSED [ 48%] tests/tests.py::test_tmpdir PASSED [ 49%] tests/tests.py::test_tmpdir_default PASSED [ 49%] tests/tests.py::test_issue1284 PASSED [ 49%] tests/tests.py::test_issue1281 PASSED [ 50%] tests/tests.py::test_filegraph PASSED [ 50%] tests/tests.py::test_batch PASSED [ 50%] tests/tests.py::test_batch_final PASSED [ 51%] tests/tests.py::test_batch_fail PASSED [ 51%] tests/tests.py::test_github_issue52 PASSED [ 51%] tests/tests.py::test_envvars PASSED [ 52%] tests/tests.py::test_github_issue105 PASSED [ 52%] tests/tests.py::test_github_issue413 PASSED [ 53%] tests/tests.py::test_github_issue627 PASSED [ 53%] tests/tests.py::test_github_issue727 PASSED [ 53%] tests/tests.py::test_github_issue988 PASSED [ 54%] tests/tests.py::test_github_issue1062 SKIPPED (ftp connections curre...) [ 54%] tests/tests.py::test_output_file_cache PASSED [ 54%] tests/tests.py::test_multiext PASSED [ 55%] tests/tests.py::test_core_dependent_threads PASSED [ 55%] tests/tests.py::test_env_modules PASSED [ 55%] tests/tests.py::test_container SKIPPED (no internet connection) [ 56%] tests/tests.py::test_string_resources PASSED [ 56%] tests/tests.py::test_github_issue456 PASSED [ 56%] tests/tests.py::test_scatter_gather PASSED [ 57%] tests/tests.py::test_parsing_terminal_comment_following_statement PASSED [ 57%] tests/tests.py::test_github_issue640 PASSED [ 57%] tests/tests.py::test_generate_unit_tests PASSED [ 58%] tests/tests.py::test_paramspace PASSED [ 58%] tests/tests.py::test_paramspace_single_wildcard PASSED [ 59%] tests/tests.py::test_github_issue806 PASSED [ 59%] tests/tests.py::test_containerize PASSED [ 59%] tests/tests.py::test_long_shell PASSED [ 60%] tests/tests.py::test_modules_all PASSED [ 60%] tests/tests.py::test_module_nested PASSED [ 60%] tests/tests.py::test_modules_all_exclude_1 PASSED [ 61%] tests/tests.py::test_modules_all_exclude_2 PASSED [ 61%] tests/tests.py::test_modules_specific PASSED [ 61%] tests/tests.py::test_use_rule_same_module PASSED [ 62%] tests/tests.py::test_module_no_prefixing_modified_paths PASSED [ 62%] tests/tests.py::test_module_worfklow_namespacing PASSED [ 62%] tests/tests.py::test_handover PASSED [ 63%] tests/tests.py::test_source_path PASSED [ 63%] tests/tests.py::test_filesep_windows_targets SKIPPED (Windows stuff) [ 63%] tests/tests.py::test_filesep_on_windows SKIPPED (Windows stuff) [ 64%] tests/tests.py::test_set_resources PASSED [ 64%] tests/tests.py::test_github_issue1069 PASSED [ 65%] tests/tests.py::test_max_jobs_per_timespan PASSED [ 65%] tests/tests.py::test_touch_pipeline_with_temp_dir PASSED [ 65%] tests/tests.py::test_all_temp PASSED [ 66%] tests/tests.py::test_github_issue1158 PASSED [ 66%] tests/tests.py::test_checkpoint_allowed_rules PASSED [ 66%] tests/tests.py::test_modules_ruledeps_inheritance PASSED [ 67%] tests/tests.py::test_issue1331 PASSED [ 67%] tests/tests.py::test_default_target PASSED [ 67%] tests/tests.py::test_cache_multioutput PASSED [ 68%] tests/tests.py::test_github_issue1384 PASSED [ 68%] tests/tests.py::test_template_engine PASSED [ 68%] tests/tests.py::test_groupid_expand_local PASSED [ 69%] tests/tests.py::test_groupid_expand_cluster PASSED [ 69%] tests/tests.py::test_service_jobs PASSED [ 69%] tests/tests.py::test_incomplete_params PASSED [ 70%] tests/tests.py::test_github_issue261 PASSED [ 70%] tests/tests.py::test_pipe_depend PASSED [ 71%] tests/tests.py::test_pipe_depend_target_file PASSED [ 71%] tests/tests.py::test_github_issue1500 PASSED [ 71%] tests/tests.py::test_github_issue1542 PASSED [ 72%] tests/tests.py::test_github_issue1550 PASSED [ 72%] tests/tests.py::test_github_issue1498 PASSED [ 72%] tests/tests.py::test_lazy_resources PASSED [ 73%] tests/tests.py::test_cleanup_metadata_fail PASSED [ 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[ 86%] tests/tests.py::test_handle_storage_multi_consumers PASSED [ 86%] tests/tests.py::test_github_issue2732 PASSED [ 87%] tests/tests.py::test_expand_list_of_functions PASSED [ 87%] tests/tests.py::test_scheduler_sequential_all_cores PASSED [ 87%] tests/tests.py::test_checkpoint_open PASSED [ 88%] tests/test_expand.py::test_simple_expand PASSED [ 88%] tests/test_expand.py::test_allow_missing PASSED [ 89%] tests/test_io.py::test_wildcard_regex PASSED [ 89%] tests/test_io.py::test_expand PASSED [ 89%] tests/test_schema.py::test_config PASSED [ 90%] tests/test_schema.py::test_config_ref PASSED [ 90%] tests/test_schema.py::test_dataframe PASSED [ 90%] tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 91%] tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 91%] tests/test_linting.py::test_lint[singularity-positive] PASSED [ 91%] tests/test_linting.py::test_lint[singularity-negative] PASSED [ 92%] tests/test_linting.py::test_lint[path_add-positive] PASSED [ 92%] tests/test_linting.py::test_lint[path_add-negative] PASSED [ 92%] tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 93%] tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 93%] tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 93%] tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 94%] tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 94%] tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 95%] tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 95%] tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 95%] tests/test_linting.py::test_lint[long_run-positive] PASSED [ 96%] tests/test_linting.py::test_lint[long_run-negative] PASSED [ 96%] tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 96%] tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 97%] tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 97%] tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 97%] tests/test_linting.py::test_lint[envvars-positive] PASSED [ 98%] tests/test_linting.py::test_lint[envvars-negative] PASSED [ 98%] tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 98%] tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 99%] tests/test_executor_test_suite.py::TestWorkflows::test_simple_workflow PASSED [ 99%] tests/test_executor_test_suite.py::TestWorkflows::test_group_workflow PASSED [100%] =============================== warnings summary =============================== tests/tests.py::test_list_untracked :488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/tests.py::test_list_untracked :488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/tests.py::test_list_untracked /usr/lib64/python3.13/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). _EPOCH_DATETIME = datetime.utcfromtimestamp(0) tests/tests.py: 4 warnings tests/test_schema.py: 12 warnings /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake/utils.py:52: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need. from jsonschema import validators, RefResolver -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html === 272 passed, 11 skipped, 60 deselected, 19 warnings in 371.99s (0:06:11) ==== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: snakemake-8.18.2-4.fc41.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.twpzmg + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + DOCDIR=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/CHANGELOG.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README-nano.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README-vim.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + RPM_EC=0 ++ jobs -p + exit 0 Provides: python3.13dist(snakemake) = 8.18.2 python3dist(snakemake) = 8.18.2 snakemake = 8.18.2-4.fc41 vim-snakemake = 8.18.2-4.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.13dist(conda-inject) < 2~~ with python3.13dist(conda-inject) >= 1.3.1) (python3.13dist(dpath) < 3~~ with python3.13dist(dpath) >= 2.1.6) (python3.13dist(jinja2) < 4~~ with python3.13dist(jinja2) >= 3) (python3.13dist(pulp) < 2.10~~ with python3.13dist(pulp) >= 2.3.1) (python3.13dist(requests) < 3~~ with python3.13dist(requests) >= 2.8.1) (python3.13dist(smart-open) < 8~~ with python3.13dist(smart-open) >= 4) (python3.13dist(snakemake-interface-common) < 2~~ with python3.13dist(snakemake-interface-common) >= 1.17) (python3.13dist(snakemake-interface-executor-plugins) < 10~~ with python3.13dist(snakemake-interface-executor-plugins) >= 9.2) (python3.13dist(snakemake-interface-report-plugins) < 2~~ with python3.13dist(snakemake-interface-report-plugins) >= 1) (python3.13dist(snakemake-interface-storage-plugins) < 4~~ with python3.13dist(snakemake-interface-storage-plugins) >= 3.2.3) (python3.13dist(toposort) < 2~~ with python3.13dist(toposort) >= 1.10) (python3.13dist(yte) < 2~~ with python3.13dist(yte) >= 1.5.1) /usr/bin/python3 python(abi) = 3.13 python3.13dist(appdirs) python3.13dist(configargparse) python3.13dist(connection-pool) >= 0.0.3 python3.13dist(datrie) python3.13dist(docutils) python3.13dist(gitpython) python3.13dist(humanfriendly) python3.13dist(immutables) python3.13dist(jsonschema) python3.13dist(nbformat) python3.13dist(packaging) python3.13dist(psutil) python3.13dist(pyyaml) python3.13dist(reretry) python3.13dist(stopit) python3.13dist(tabulate) python3.13dist(throttler) python3.13dist(wrapt) Obsoletes: snakemake+azure < 8.1.0-1 snakemake+google-cloud < 8.1.0-1 snakemake-doc < 8.2.1-2 Processing files: snakemake+reports-8.18.2-4.fc41.noarch Provides: python3.13dist(snakemake[reports]) = 8.18.2 python3dist(snakemake[reports]) = 8.18.2 snakemake+reports = 8.18.2-4.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.13 python3.13dist(pygments) Processing files: snakemake+messaging-8.18.2-4.fc41.noarch Provides: python3.13dist(snakemake[messaging]) = 8.18.2 python3dist(snakemake[messaging]) = 8.18.2 snakemake+messaging = 8.18.2-4.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.13 python3.13dist(slack-sdk) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.src.rpm Wrote: /builddir/build/RPMS/snakemake+reports-8.18.2-4.fc41.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+messaging-8.18.2-4.fc41.noarch.rpm Wrote: /builddir/build/RPMS/snakemake-8.18.2-4.fc41.noarch.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Gp3050 + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + test -d /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/snakemake-8.18.2-build + rm -rf /builddir/build/BUILD/snakemake-8.18.2-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild snakemake-8.18.2-4.fc41.src.rpm Finish: build phase for snakemake-8.18.2-4.fc41.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1728851908.372295/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-8.18.2-4.fc41.src.rpm) Config(child) 6 minutes 35 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "snakemake+messaging", "epoch": null, "version": "8.18.2", "release": "4.fc41", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "8.18.2", "release": "4.fc41", "arch": "src" }, { "name": "snakemake", "epoch": null, "version": "8.18.2", "release": "4.fc41", "arch": "noarch" }, { "name": "snakemake+reports", "epoch": null, "version": "8.18.2", "release": "4.fc41", "arch": "noarch" } ] } RPMResults finished