Warning: Permanently added '18.206.227.75' (ED25519) to the list of known hosts. INFO: Reading stdout from command: md5sum snakemake-8.4.8.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-s9x9q8qb/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-s9x9q8qb/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1707906836.488850 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.4 starting (python version = 3.12.1, NVR = mock-5.4-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-s9x9q8qb/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-s9x9q8qb/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1707906836.488850 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-s9x9q8qb/snakemake/snakemake.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.4 INFO: Mock Version: 5.4 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1707906836.488850/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1707906836.488850/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/d7c95d3a88e45b1dcdf1cf91ae5deff78df87e7afa897196686d84a7a3964bd7/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/d7c95d3a88e45b1dcdf1cf91ae5deff78df87e7afa897196686d84a7a3964bd7/merged) with podman image umount INFO: Using 'dnf' instead of 'dnf5' for bootstrap chroot INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf5 tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 5.7 MB/s | 135 kB 00:00 fedora 28 MB/s | 20 MB 00:00 Dependencies resolved. ================================================================================ Package Architecture Version Repository Size ================================================================================ Installing: dnf5 x86_64 5.1.12-1.fc40 fedora 588 k dnf5-plugins x86_64 5.1.12-1.fc40 fedora 351 k Installing dependencies: fmt x86_64 10.2.1-3.fc40 fedora 125 k libdnf5 x86_64 5.1.12-1.fc40 fedora 974 k libdnf5-cli x86_64 5.1.12-1.fc40 fedora 262 k sdbus-cpp x86_64 1.4.0-2.fc40 fedora 110 k Transaction Summary ================================================================================ Install 6 Packages Total download size: 2.4 M Installed size: 6.5 M Downloading Packages: (1/6): fmt-10.2.1-3.fc40.x86_64.rpm 11 MB/s | 125 kB 00:00 (2/6): dnf5-5.1.12-1.fc40.x86_64.rpm 38 MB/s | 588 kB 00:00 (3/6): dnf5-plugins-5.1.12-1.fc40.x86_64.rpm 21 MB/s | 351 kB 00:00 (4/6): libdnf5-cli-5.1.12-1.fc40.x86_64.rpm 107 MB/s | 262 kB 00:00 (5/6): libdnf5-5.1.12-1.fc40.x86_64.rpm 138 MB/s | 974 kB 00:00 (6/6): sdbus-cpp-1.4.0-2.fc40.x86_64.rpm 39 MB/s | 110 kB 00:00 -------------------------------------------------------------------------------- Total 51 MB/s | 2.4 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : fmt-10.2.1-3.fc40.x86_64 1/6 Installing : libdnf5-5.1.12-1.fc40.x86_64 2/6 Installing : libdnf5-cli-5.1.12-1.fc40.x86_64 3/6 Installing : dnf5-5.1.12-1.fc40.x86_64 4/6 Installing : sdbus-cpp-1.4.0-2.fc40.x86_64 5/6 Installing : dnf5-plugins-5.1.12-1.fc40.x86_64 6/6 Running scriptlet: dnf5-plugins-5.1.12-1.fc40.x86_64 6/6 Installed: dnf5-5.1.12-1.fc40.x86_64 dnf5-plugins-5.1.12-1.fc40.x86_64 fmt-10.2.1-3.fc40.x86_64 libdnf5-5.1.12-1.fc40.x86_64 libdnf5-cli-5.1.12-1.fc40.x86_64 sdbus-cpp-1.4.0-2.fc40.x86_64 Complete! INFO: Switching package manager from dnf to the dnf5 (direct choice) Finish(bootstrap): installing dnf5 tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1707906836.488850/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 python3-dnf-4.19.0-1.fc40.noarch yum-4.19.0-1.fc40.noarch dnf5-5.1.12-1.fc40.x86_64 dnf5-plugins-5.1.12-1.fc40.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 881.6 KiB/s | 22.0 KiB | 00m00s Copr repository 100% | 95.4 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 4.6 MiB/s | 137.6 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.26-3.fc40 fedora 8.1 MiB bzip2 x86_64 1.0.8-18.fc40 fedora 91.7 KiB coreutils x86_64 9.4-6.fc40 fedora 5.8 MiB cpio x86_64 2.15-1.fc40 fedora 1.1 MiB diffutils x86_64 3.10-5.fc40 fedora 1.6 MiB fedora-release-common noarch 40-0.30 fedora 19.1 KiB findutils x86_64 1:4.9.0-8.fc40 fedora 1.5 MiB gawk x86_64 5.3.0-3.fc40 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.39-2.fc40 fedora 0.0 B grep x86_64 3.11-7.fc40 fedora 1.0 MiB gzip x86_64 1.13-1.fc40 fedora 385.0 KiB info x86_64 7.1-2.fc40 fedora 357.8 KiB patch x86_64 2.7.6-24.fc40 fedora 262.8 KiB redhat-rpm-config noarch 282-1.fc40 fedora 183.2 KiB rpm-build x86_64 4.19.1.1-1.fc40 fedora 173.7 KiB sed x86_64 4.9-1.fc40 fedora 861.5 KiB shadow-utils x86_64 2:4.14.0-5.fc40 fedora 4.1 MiB tar x86_64 2:1.35-3.fc40 fedora 2.9 MiB unzip x86_64 6.0-63.fc40 fedora 382.8 KiB util-linux x86_64 2.40-0.8.rc1.fc40 fedora 3.7 MiB which x86_64 2.21-41.fc40 fedora 80.2 KiB xz x86_64 5.4.6-1.fc40 fedora 2.0 MiB Installing dependencies: alternatives x86_64 1.26-3.fc40 fedora 62.3 KiB ansible-srpm-macros noarch 1-14.fc40 fedora 35.7 KiB audit-libs x86_64 4.0-8.fc40 fedora 311.3 KiB authselect x86_64 1.5.0-3.fc40 fedora 156.6 KiB authselect-libs x86_64 1.5.0-3.fc40 fedora 987.8 KiB basesystem noarch 11-20.fc40 fedora 0.0 B binutils x86_64 2.41-32.fc40 fedora 26.4 MiB binutils-gold x86_64 2.41-32.fc40 fedora 2.0 MiB bzip2-libs x86_64 1.0.8-18.fc40 fedora 80.7 KiB ca-certificates noarch 2023.2.62_v7.0.401-6.fc40 fedora 2.3 MiB coreutils-common x86_64 9.4-6.fc40 fedora 11.4 MiB cracklib x86_64 2.9.11-5.fc40 fedora 238.9 KiB crypto-policies noarch 20240201-1.git9f501f3.fc40 fedora 149.3 KiB curl x86_64 8.6.0-4.fc40 fedora 734.6 KiB debugedit x86_64 5.0-14.fc40 fedora 199.0 KiB dwz x86_64 0.15-6.fc40 fedora 290.9 KiB ed x86_64 1.20-2.fc40 fedora 146.4 KiB efi-srpm-macros noarch 5-11.fc40 fedora 40.1 KiB elfutils x86_64 0.190-6.fc40 fedora 2.5 MiB elfutils-debuginfod-client x86_64 0.190-6.fc40 fedora 64.9 KiB elfutils-default-yama-scope noarch 0.190-6.fc40 fedora 1.8 KiB elfutils-libelf x86_64 0.190-6.fc40 fedora 1.0 MiB elfutils-libs x86_64 0.190-6.fc40 fedora 642.1 KiB fedora-gpg-keys noarch 40-0.2 fedora 123.2 KiB fedora-release noarch 40-0.30 fedora 0.0 B fedora-release-identity-basic noarch 40-0.30 fedora 694.0 B fedora-repos noarch 40-0.2 fedora 4.9 KiB fedora-repos-rawhide noarch 40-0.2 fedora 2.2 KiB file x86_64 5.45-4.fc40 fedora 103.5 KiB file-libs x86_64 5.45-4.fc40 fedora 9.9 MiB filesystem x86_64 3.18-8.fc40 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-14.fc40 fedora 55.3 KiB forge-srpm-macros noarch 0.2.0-3.fc40 fedora 37.4 KiB fpc-srpm-macros noarch 1.3-12.fc40 fedora 144.0 B gdb-minimal x86_64 14.1-8.fc40 fedora 12.3 MiB gdbm x86_64 1:1.23-6.fc40 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-6.fc40 fedora 121.9 KiB ghc-srpm-macros noarch 1.6.1-5.fc40 fedora 369.0 B glibc x86_64 2.39-2.fc40 fedora 6.7 MiB glibc-common x86_64 2.39-2.fc40 fedora 1.0 MiB glibc-gconv-extra x86_64 2.39-2.fc40 fedora 7.8 MiB gmp x86_64 1:6.2.1-8.fc40 fedora 794.6 KiB gnat-srpm-macros noarch 6-5.fc40 fedora 1.0 KiB go-srpm-macros noarch 3.4.0-2.fc40 fedora 60.6 KiB jansson x86_64 2.13.1-9.fc40 fedora 88.3 KiB kernel-srpm-macros noarch 1.0-22.fc40 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-3.fc40 fedora 54.4 KiB krb5-libs x86_64 1.21.2-5.fc40 fedora 2.3 MiB libacl x86_64 2.3.2-1.fc40 fedora 40.0 KiB libarchive x86_64 3.7.2-3.fc40 fedora 914.6 KiB libattr x86_64 2.5.2-3.fc40 fedora 28.5 KiB libblkid x86_64 2.40-0.8.rc1.fc40 fedora 237.0 KiB libcap x86_64 2.69-3.fc40 fedora 217.2 KiB libcap-ng x86_64 0.8.4-4.fc40 fedora 73.1 KiB libcom_err x86_64 1.47.0-5.fc40 fedora 67.2 KiB libcurl-minimal x86_64 8.6.0-4.fc40 fedora 598.5 KiB libeconf x86_64 0.5.2-3.fc40 fedora 52.0 KiB libfdisk x86_64 2.40-0.8.rc1.fc40 fedora 363.3 KiB libffi x86_64 3.4.4-7.fc40 fedora 81.6 KiB libgcc x86_64 14.0.1-0.6.fc40 fedora 270.6 KiB libgomp x86_64 14.0.1-0.6.fc40 fedora 518.0 KiB libidn2 x86_64 2.3.7-1.fc40 fedora 329.1 KiB libmount x86_64 2.40-0.8.rc1.fc40 fedora 352.1 KiB libnghttp2 x86_64 1.59.0-2.fc40 fedora 166.1 KiB libnsl2 x86_64 2.0.1-1.fc40 fedora 57.9 KiB libpkgconf x86_64 1.9.5-4.fc40 fedora 74.1 KiB libpwquality x86_64 1.4.5-9.fc40 fedora 417.8 KiB libselinux x86_64 3.6-4.fc40 fedora 173.0 KiB libsemanage x86_64 3.6-3.fc40 fedora 293.5 KiB libsepol x86_64 3.6-3.fc40 fedora 802.0 KiB libsmartcols x86_64 2.40-0.8.rc1.fc40 fedora 180.7 KiB libstdc++ x86_64 14.0.1-0.6.fc40 fedora 2.8 MiB libtasn1 x86_64 4.19.0-6.fc40 fedora 175.7 KiB libtirpc x86_64 1.3.4-1.rc2.fc40.2 fedora 202.8 KiB libunistring x86_64 1.1-7.fc40 fedora 1.7 MiB libutempter x86_64 1.2.1-13.fc40 fedora 57.7 KiB libuuid x86_64 2.40-0.8.rc1.fc40 fedora 37.6 KiB libverto x86_64 0.3.2-8.fc40 fedora 29.5 KiB libxcrypt x86_64 4.4.36-5.fc40 fedora 262.8 KiB libxml2 x86_64 2.12.5-1.fc40 fedora 1.7 MiB libzstd x86_64 1.5.5-5.fc40 fedora 772.0 KiB lua-libs x86_64 5.4.6-5.fc40 fedora 281.1 KiB lua-srpm-macros noarch 1-11.fc40 fedora 1.3 KiB lz4-libs x86_64 1.9.4-6.fc40 fedora 129.4 KiB mpfr x86_64 4.2.1-3.fc40 fedora 832.0 KiB ncurses-base noarch 6.4-12.20240127.fc40 fedora 326.2 KiB ncurses-libs x86_64 6.4-12.20240127.fc40 fedora 963.2 KiB ocaml-srpm-macros noarch 9-3.fc40 fedora 1.9 KiB openblas-srpm-macros noarch 2-16.fc40 fedora 104.0 B openssl-libs x86_64 1:3.2.1-2.fc40 fedora 7.8 MiB p11-kit x86_64 0.25.3-4.fc40 fedora 2.2 MiB p11-kit-trust x86_64 0.25.3-4.fc40 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-11.fc40 fedora 1.6 KiB pam x86_64 1.6.0-1.fc40 fedora 1.8 MiB pam-libs x86_64 1.6.0-1.fc40 fedora 135.0 KiB pcre2 x86_64 10.42-2.fc40.2 fedora 637.6 KiB pcre2-syntax noarch 10.42-2.fc40.2 fedora 235.1 KiB perl-srpm-macros noarch 1-53.fc40 fedora 861.0 B pkgconf x86_64 1.9.5-4.fc40 fedora 79.8 KiB pkgconf-m4 noarch 1.9.5-4.fc40 fedora 13.9 KiB pkgconf-pkg-config x86_64 1.9.5-4.fc40 fedora 989.0 B popt x86_64 1.19-6.fc40 fedora 136.9 KiB pyproject-srpm-macros noarch 1.12.0-1.fc40 fedora 1.5 KiB python-srpm-macros noarch 3.12-7.fc40 fedora 50.1 KiB qt5-srpm-macros noarch 5.15.12-3.fc40 fedora 492.0 B qt6-srpm-macros noarch 6.6.1-5.fc40 fedora 456.0 B readline x86_64 8.2-8.fc40 fedora 489.2 KiB rpm x86_64 4.19.1.1-1.fc40 fedora 3.0 MiB rpm-build-libs x86_64 4.19.1.1-1.fc40 fedora 198.4 KiB rpm-libs x86_64 4.19.1.1-1.fc40 fedora 709.9 KiB rpm-sequoia x86_64 1.6.0-2.fc40 fedora 2.2 MiB rust-srpm-macros noarch 25.2-4.fc40 fedora 5.1 KiB setup noarch 2.14.5-2.fc40 fedora 720.4 KiB sqlite-libs x86_64 3.45.1-2.fc40 fedora 1.4 MiB systemd-libs x86_64 255.3-1.fc40 fedora 1.9 MiB util-linux-core x86_64 2.40-0.8.rc1.fc40 fedora 1.4 MiB xxhash-libs x86_64 0.8.2-2.fc40 fedora 88.5 KiB xz-libs x86_64 5.4.6-1.fc40 fedora 209.8 KiB zig-srpm-macros noarch 1-2.fc40 fedora 1.1 KiB zip x86_64 3.0-40.fc40 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.6-2.fc40 fedora 134.0 KiB zstd x86_64 1.5.5-5.fc40 fedora 1.6 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 144 packages Total size of inbound packages is 51 MiB. Need to download 0 B. After this operation 172 MiB will be used (install 172 MiB, remove 0 B). [ 1/144] tar-2:1.35-3.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 2/144] bzip2-0:1.0.8-18.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 3/144] redhat-rpm-config-0:282-1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 4/144] rpm-build-0:4.19.1.1-1.fc40.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/144] unzip-0:6.0-63.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/144] cpio-0:2.15-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 7/144] which-0:2.21-41.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/144] bash-0:5.2.26-3.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 9/144] coreutils-0:9.4-6.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 10/144] grep-0:3.11-7.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 11/144] patch-0:2.7.6-24.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 12/144] sed-0:4.9-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 13/144] shadow-utils-2:4.14.0-5.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 14/144] diffutils-0:3.10-5.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 15/144] fedora-release-common-0:40-0. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 16/144] findutils-1:4.9.0-8.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 17/144] glibc-minimal-langpack-0:2.39 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 18/144] gzip-0:1.13-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 19/144] info-0:7.1-2.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 20/144] xz-0:5.4.6-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 21/144] util-linux-0:2.40-0.8.rc1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 22/144] gawk-0:5.3.0-3.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 23/144] glibc-0:2.39-2.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 24/144] libacl-0:2.3.2-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 25/144] libselinux-0:3.6-4.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 26/144] bzip2-libs-0:1.0.8-18.fc40.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 27/144] ansible-srpm-macros-0:1-14.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 28/144] dwz-0:0.15-6.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 29/144] efi-srpm-macros-0:5-11.fc40.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 30/144] file-0:5.45-4.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 31/144] fonts-srpm-macros-1:2.0.5-14. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 32/144] forge-srpm-macros-0:0.2.0-3.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 33/144] fpc-srpm-macros-0:1.3-12.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 34/144] ghc-srpm-macros-0:1.6.1-5.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 35/144] gnat-srpm-macros-0:6-5.fc40.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 36/144] go-srpm-macros-0:3.4.0-2.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 37/144] kernel-srpm-macros-0:1.0-22.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 38/144] lua-srpm-macros-0:1-11.fc40.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 39/144] ocaml-srpm-macros-0:9-3.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 40/144] openblas-srpm-macros-0:2-16.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 41/144] package-notes-srpm-macros-0:0 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 42/144] perl-srpm-macros-0:1-53.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 43/144] pyproject-srpm-macros-0:1.12. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 44/144] python-srpm-macros-0:3.12-7.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 45/144] qt5-srpm-macros-0:5.15.12-3.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 46/144] qt6-srpm-macros-0:6.6.1-5.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 47/144] rpm-0:4.19.1.1-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 48/144] rust-srpm-macros-0:25.2-4.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 49/144] zig-srpm-macros-0:1-2.fc40.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 50/144] zip-0:3.0-40.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 51/144] debugedit-0:5.0-14.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 52/144] elfutils-0:0.190-6.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 53/144] elfutils-libelf-0:0.190-6.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 54/144] popt-0:1.19-6.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 55/144] readline-0:8.2-8.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 56/144] rpm-build-libs-0:4.19.1.1-1.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 57/144] rpm-libs-0:4.19.1.1-1.fc40.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 58/144] zstd-0:1.5.5-5.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 59/144] filesystem-0:3.18-8.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 60/144] ncurses-libs-0:6.4-12.2024012 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 61/144] coreutils-common-0:9.4-6.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 62/144] gmp-1:6.2.1-8.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 63/144] libattr-0:2.5.2-3.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 64/144] libcap-0:2.69-3.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 65/144] openssl-libs-1:3.2.1-2.fc40.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 66/144] pcre2-0:10.42-2.fc40.2.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 67/144] ed-0:1.20-2.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 68/144] audit-libs-0:4.0-8.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 69/144] libeconf-0:0.5.2-3.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 70/144] libsemanage-0:3.6-3.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 71/144] libxcrypt-0:4.4.36-5.fc40.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 72/144] setup-0:2.14.5-2.fc40.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 73/144] fedora-repos-0:40-0.2.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 74/144] glibc-common-0:2.39-2.fc40.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 75/144] xz-libs-0:5.4.6-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 76/144] libblkid-0:2.40-0.8.rc1.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 77/144] libcap-ng-0:0.8.4-4.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 78/144] libfdisk-0:2.40-0.8.rc1.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 79/144] libmount-0:2.40-0.8.rc1.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 80/144] libsmartcols-0:2.40-0.8.rc1.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 81/144] libutempter-0:1.2.1-13.fc40.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 82/144] libuuid-0:2.40-0.8.rc1.fc40.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 83/144] pam-libs-0:1.6.0-1.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 84/144] systemd-libs-0:255.3-1.fc40.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 85/144] util-linux-core-0:2.40-0.8.rc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 86/144] zlib-ng-compat-0:2.1.6-2.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 87/144] mpfr-0:4.2.1-3.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 88/144] glibc-gconv-extra-0:2.39-2.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 89/144] basesystem-0:11-20.fc40.noarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 90/144] libgcc-0:14.0.1-0.6.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 91/144] libsepol-0:3.6-3.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 92/144] file-libs-0:5.45-4.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 93/144] curl-0:8.6.0-4.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 94/144] libarchive-0:3.7.2-3.fc40.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 95/144] elfutils-libs-0:0.190-6.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 96/144] libstdc++-0:14.0.1-0.6.fc40.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 97/144] libzstd-0:1.5.5-5.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 98/144] libgomp-0:14.0.1-0.6.fc40.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 99/144] lua-libs-0:5.4.6-5.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [100/144] rpm-sequoia-0:1.6.0-2.fc40.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [101/144] sqlite-libs-0:3.45.1-2.fc40.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [102/144] lz4-libs-0:1.9.4-6.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [103/144] ncurses-base-0:6.4-12.2024012 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [104/144] ca-certificates-0:2023.2.62_v 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [105/144] crypto-policies-0:20240201-1. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [106/144] pcre2-syntax-0:10.42-2.fc40.2 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [107/144] fedora-gpg-keys-0:40-0.2.noar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [108/144] fedora-repos-rawhide-0:40-0.2 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [109/144] libxml2-0:2.12.5-1.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [110/144] elfutils-default-yama-scope-0 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [111/144] authselect-libs-0:1.5.0-3.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [112/144] pam-0:1.6.0-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [113/144] authselect-0:1.5.0-3.fc40.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [114/144] gdbm-libs-1:1.23-6.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [115/144] libnsl2-0:2.0.1-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [116/144] libpwquality-0:1.4.5-9.fc40.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [117/144] libtirpc-0:1.3.4-1.rc2.fc40.2 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [118/144] cracklib-0:2.9.11-5.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [119/144] krb5-libs-0:1.21.2-5.fc40.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [120/144] libcom_err-0:1.47.0-5.fc40.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [121/144] keyutils-libs-0:1.6.3-3.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [122/144] libverto-0:0.3.2-8.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [123/144] binutils-0:2.41-32.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [124/144] alternatives-0:1.26-3.fc40.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [125/144] binutils-gold-0:2.41-32.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [126/144] elfutils-debuginfod-client-0: 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [127/144] jansson-0:2.13.1-9.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [128/144] pkgconf-pkg-config-0:1.9.5-4. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [129/144] pkgconf-0:1.9.5-4.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [130/144] pkgconf-m4-0:1.9.5-4.fc40.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [131/144] libpkgconf-0:1.9.5-4.fc40.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [132/144] gdbm-1:1.23-6.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [133/144] p11-kit-0:0.25.3-4.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [134/144] libffi-0:3.4.4-7.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [135/144] libtasn1-0:4.19.0-6.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [136/144] p11-kit-trust-0:0.25.3-4.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [137/144] fedora-release-0:40-0.30.noar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [138/144] gdb-minimal-0:14.1-8.fc40.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [139/144] xxhash-libs-0:0.8.2-2.fc40.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [140/144] fedora-release-identity-basic 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [141/144] libcurl-minimal-0:8.6.0-4.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [142/144] libidn2-0:2.3.7-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [143/144] libnghttp2-0:1.59.0-2.fc40.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [144/144] libunistring-0:1.1-7.fc40.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [144/144] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction Importing PGP key 0xA15B79CC: Userid : "Fedora (40) " Fingerprint: 115DF9AEF857853EE8445D0A0727707EA15B79CC From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary The key was successfully imported. Importing PGP key 0xA15B79CC: Userid : "Fedora (40) " Fingerprint: 115DF9AEF857853EE8445D0A0727707EA15B79CC From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary The key was successfully imported. Importing PGP key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F23996F23218640CB44CBE75CF5AC418B8E74C From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary The key was successfully imported. [ 1/146] Verify package files 100% | 612.0 B/s | 144.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Stop pre-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 [ 2/146] Prepare transaction 100% | 3.7 KiB/s | 144.0 B | 00m00s [ 3/146] Installing libgcc-0:14.0.1-0. 100% | 133.0 MiB/s | 272.3 KiB | 00m00s >>> Running post-install scriptlet: libgcc-0:14.0.1-0.6.fc40.x86_64 >>> Stop post-install scriptlet: libgcc-0:14.0.1-0.6.fc40.x86_64 [ 4/146] Installing fedora-release-ide 100% | 929.7 KiB/s | 952.0 B | 00m00s [ 5/146] Installing crypto-policies-0: 100% | 35.5 MiB/s | 181.7 KiB | 00m00s >>> Running post-install scriptlet: crypto-policies-0:20240201-1.git9f501f3.fc40 >>> Stop post-install scriptlet: crypto-policies-0:20240201-1.git9f501f3.fc40.no [ 6/146] Installing fedora-gpg-keys-0: 100% | 54.6 MiB/s | 167.6 KiB | 00m00s [ 7/146] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/146] Installing fedora-repos-0:40- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 9/146] Installing fedora-release-com 100% | 22.6 MiB/s | 23.2 KiB | 00m00s [ 10/146] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 11/146] Installing setup-0:2.14.5-2.f 100% | 54.5 MiB/s | 725.8 KiB | 00m00s >>> Running post-install scriptlet: setup-0:2.14.5-2.fc40.noarch >>> Stop post-install scriptlet: setup-0:2.14.5-2.fc40.noarch [ 12/146] Installing filesystem-0:3.18- 100% | 3.2 MiB/s | 212.4 KiB | 00m00s [ 13/146] Installing basesystem-0:11-20 100% | 0.0 B/s | 124.0 B | 00m00s [ 14/146] Installing pkgconf-m4-0:1.9.5 100% | 0.0 B/s | 14.3 KiB | 00m00s [ 15/146] Installing pcre2-syntax-0:10. 100% | 232.0 MiB/s | 237.6 KiB | 00m00s [ 16/146] Installing ncurses-base-0:6.4 100% | 85.8 MiB/s | 351.6 KiB | 00m00s [ 17/146] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 18/146] Installing ncurses-libs-0:6.4 100% | 236.7 MiB/s | 969.7 KiB | 00m00s >>> Running pre-install scriptlet: glibc-0:2.39-2.fc40.x86_64 >>> Stop pre-install scriptlet: glibc-0:2.39-2.fc40.x86_64 [ 19/146] Installing glibc-0:2.39-2.fc4 100% | 232.6 MiB/s | 6.7 MiB | 00m00s >>> Running post-install scriptlet: glibc-0:2.39-2.fc40.x86_64 >>> Stop post-install scriptlet: glibc-0:2.39-2.fc40.x86_64 [ 20/146] Installing bash-0:5.2.26-3.fc 100% | 388.6 MiB/s | 8.2 MiB | 00m00s >>> Running post-install scriptlet: bash-0:5.2.26-3.fc40.x86_64 >>> Stop post-install scriptlet: bash-0:5.2.26-3.fc40.x86_64 [ 21/146] Installing glibc-common-0:2.3 100% | 170.1 MiB/s | 1.0 MiB | 00m00s [ 22/146] Installing glibc-gconv-extra- 100% | 238.2 MiB/s | 7.9 MiB | 00m00s >>> Running post-install scriptlet: glibc-gconv-extra-0:2.39-2.fc40.x86_64 >>> Stop post-install scriptlet: glibc-gconv-extra-0:2.39-2.fc40.x86_64 [ 23/146] Installing zlib-ng-compat-0:2 100% | 131.7 MiB/s | 134.8 KiB | 00m00s [ 24/146] Installing xz-libs-0:5.4.6-1. 100% | 206.0 MiB/s | 210.9 KiB | 00m00s [ 25/146] Installing bzip2-libs-0:1.0.8 100% | 79.9 MiB/s | 81.8 KiB | 00m00s [ 26/146] Installing popt-0:1.19-6.fc40 100% | 70.1 MiB/s | 143.5 KiB | 00m00s [ 27/146] Installing readline-0:8.2-8.f 100% | 239.9 MiB/s | 491.4 KiB | 00m00s [ 28/146] Installing libuuid-0:2.40-0.8 100% | 38.0 MiB/s | 38.9 KiB | 00m00s [ 29/146] Installing libstdc++-0:14.0.1 100% | 345.3 MiB/s | 2.8 MiB | 00m00s [ 30/146] Installing libzstd-0:1.5.5-5. 100% | 377.5 MiB/s | 773.2 KiB | 00m00s [ 31/146] Installing elfutils-libelf-0: 100% | 328.5 MiB/s | 1.0 MiB | 00m00s [ 32/146] Installing libblkid-0:2.40-0. 100% | 232.4 MiB/s | 237.9 KiB | 00m00s [ 33/146] Installing gmp-1:6.2.1-8.fc40 100% | 389.1 MiB/s | 796.8 KiB | 00m00s [ 34/146] Installing libattr-0:2.5.2-3. 100% | 0.0 B/s | 29.5 KiB | 00m00s [ 35/146] Installing libacl-0:2.3.2-1.f 100% | 0.0 B/s | 40.8 KiB | 00m00s [ 36/146] Installing libeconf-0:0.5.2-3 100% | 52.4 MiB/s | 53.7 KiB | 00m00s [ 37/146] Installing libxcrypt-0:4.4.36 100% | 259.3 MiB/s | 265.5 KiB | 00m00s [ 38/146] Installing lz4-libs-0:1.9.4-6 100% | 127.4 MiB/s | 130.5 KiB | 00m00s [ 39/146] Installing mpfr-0:4.2.1-3.fc4 100% | 271.3 MiB/s | 833.5 KiB | 00m00s [ 40/146] Installing gawk-0:5.3.0-3.fc4 100% | 288.0 MiB/s | 1.7 MiB | 00m00s [ 41/146] Installing dwz-0:0.15-6.fc40. 100% | 285.5 MiB/s | 292.3 KiB | 00m00s [ 42/146] Installing unzip-0:6.0-63.fc4 100% | 188.6 MiB/s | 386.3 KiB | 00m00s [ 43/146] Installing file-libs-0:5.45-4 100% | 620.6 MiB/s | 9.9 MiB | 00m00s [ 44/146] Installing file-0:5.45-4.fc40 100% | 102.6 MiB/s | 105.0 KiB | 00m00s [ 45/146] Installing pcre2-0:10.42-2.fc 100% | 312.0 MiB/s | 639.1 KiB | 00m00s [ 46/146] Installing grep-0:3.11-7.fc40 100% | 200.7 MiB/s | 1.0 MiB | 00m00s [ 47/146] Installing xz-0:5.4.6-1.fc40. 100% | 250.3 MiB/s | 2.0 MiB | 00m00s [ 48/146] Installing libcap-ng-0:0.8.4- 100% | 73.2 MiB/s | 75.0 KiB | 00m00s [ 49/146] Installing audit-libs-0:4.0-8 100% | 306.0 MiB/s | 313.4 KiB | 00m00s [ 50/146] Installing pam-libs-0:1.6.0-1 100% | 134.1 MiB/s | 137.3 KiB | 00m00s [ 51/146] Installing libcap-0:2.69-3.fc 100% | 108.3 MiB/s | 221.9 KiB | 00m00s [ 52/146] Installing systemd-libs-0:255 100% | 321.7 MiB/s | 1.9 MiB | 00m00s [ 53/146] Installing libsmartcols-0:2.4 100% | 177.6 MiB/s | 181.9 KiB | 00m00s [ 54/146] Installing libsepol-0:3.6-3.f 100% | 392.1 MiB/s | 803.0 KiB | 00m00s [ 55/146] Installing libselinux-0:3.6-4 100% | 170.2 MiB/s | 174.3 KiB | 00m00s [ 56/146] Installing sed-0:4.9-1.fc40.x 100% | 212.3 MiB/s | 869.7 KiB | 00m00s [ 57/146] Installing findutils-1:4.9.0- 100% | 293.2 MiB/s | 1.5 MiB | 00m00s [ 58/146] Installing libmount-0:2.40-0. 100% | 172.6 MiB/s | 353.4 KiB | 00m00s [ 59/146] Installing lua-libs-0:5.4.6-5 100% | 275.7 MiB/s | 282.3 KiB | 00m00s [ 60/146] Installing gdbm-libs-1:1.23-6 100% | 120.7 MiB/s | 123.6 KiB | 00m00s [ 61/146] Installing libcom_err-0:1.47. 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 62/146] Installing alternatives-0:1.2 100% | 62.5 MiB/s | 64.0 KiB | 00m00s [ 63/146] Installing jansson-0:2.13.1-9 100% | 87.6 MiB/s | 89.7 KiB | 00m00s [ 64/146] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB | 00m00s [ 65/146] Installing gdbm-1:1.23-6.fc40 100% | 151.6 MiB/s | 465.8 KiB | 00m00s [ 66/146] Installing util-linux-core-0: 100% | 230.8 MiB/s | 1.4 MiB | 00m00s [ 67/146] Installing tar-2:1.35-3.fc40. 100% | 368.8 MiB/s | 3.0 MiB | 00m00s [ 68/146] Installing libsemanage-0:3.6- 100% | 144.2 MiB/s | 295.3 KiB | 00m00s [ 69/146] Installing shadow-utils-2:4.1 100% | 153.9 MiB/s | 4.2 MiB | 00m00s >>> Running pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64 >>> Stop pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64 [ 70/146] Installing libutempter-0:1.2. 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [ 71/146] Installing zip-0:3.0-40.fc40. 100% | 230.2 MiB/s | 707.1 KiB | 00m00s [ 72/146] Installing zstd-0:1.5.5-5.fc4 100% | 329.3 MiB/s | 1.6 MiB | 00m00s [ 73/146] Installing libfdisk-0:2.40-0. 100% | 355.9 MiB/s | 364.5 KiB | 00m00s [ 74/146] Installing bzip2-0:1.0.8-18.f 100% | 93.9 MiB/s | 96.2 KiB | 00m00s [ 75/146] Installing libxml2-0:2.12.5-1 100% | 340.0 MiB/s | 1.7 MiB | 00m00s [ 76/146] Installing sqlite-libs-0:3.45 100% | 350.3 MiB/s | 1.4 MiB | 00m00s [ 77/146] Installing ed-0:1.20-2.fc40.x 100% | 145.2 MiB/s | 148.7 KiB | 00m00s [ 78/146] Installing patch-0:2.7.6-24.f 100% | 258.1 MiB/s | 264.3 KiB | 00m00s [ 79/146] Installing elfutils-default-y 100% | 510.7 KiB/s | 2.0 KiB | 00m00s >>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.190-6.fc40.n >>> Stop post-install scriptlet: elfutils-default-yama-scope-0:0.190-6.fc40.noar [ 80/146] Installing cpio-0:2.15-1.fc40 100% | 219.9 MiB/s | 1.1 MiB | 00m00s [ 81/146] Installing diffutils-0:3.10-5 100% | 317.2 MiB/s | 1.6 MiB | 00m00s [ 82/146] Installing libgomp-0:14.0.1-0 100% | 253.6 MiB/s | 519.4 KiB | 00m00s [ 83/146] Installing keyutils-libs-0:1. 100% | 54.5 MiB/s | 55.8 KiB | 00m00s [ 84/146] Installing libverto-0:0.3.2-8 100% | 30.5 MiB/s | 31.3 KiB | 00m00s [ 85/146] Installing libpkgconf-0:1.9.5 100% | 73.5 MiB/s | 75.2 KiB | 00m00s [ 86/146] Installing pkgconf-0:1.9.5-4. 100% | 80.4 MiB/s | 82.3 KiB | 00m00s [ 87/146] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [ 88/146] Installing libffi-0:3.4.4-7.f 100% | 81.0 MiB/s | 83.0 KiB | 00m00s [ 89/146] Installing p11-kit-0:0.25.3-4 100% | 243.8 MiB/s | 2.2 MiB | 00m00s [ 90/146] Installing p11-kit-trust-0:0. 100% | 64.0 MiB/s | 393.1 KiB | 00m00s >>> Running post-install scriptlet: p11-kit-trust-0:0.25.3-4.fc40.x86_64 >>> Stop post-install scriptlet: p11-kit-trust-0:0.25.3-4.fc40.x86_64 [ 91/146] Installing xxhash-libs-0:0.8. 100% | 87.8 MiB/s | 89.9 KiB | 00m00s [ 92/146] Installing libnghttp2-0:1.59. 100% | 163.3 MiB/s | 167.2 KiB | 00m00s [ 93/146] Installing libunistring-0:1.1 100% | 346.1 MiB/s | 1.7 MiB | 00m00s [ 94/146] Installing libidn2-0:2.3.7-1. 100% | 109.1 MiB/s | 335.0 KiB | 00m00s [ 95/146] Installing coreutils-common-0 100% | 382.1 MiB/s | 11.5 MiB | 00m00s [ 96/146] Installing openssl-libs-1:3.2 100% | 409.9 MiB/s | 7.8 MiB | 00m00s [ 97/146] Installing coreutils-0:9.4-6. 100% | 290.7 MiB/s | 5.8 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.n >>> Stop pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.noar [ 98/146] Installing ca-certificates-0: 100% | 3.8 MiB/s | 2.3 MiB | 00m01s >>> Running post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40. >>> Stop post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.noa [ 99/146] Installing gzip-0:1.13-1.fc40 100% | 127.1 MiB/s | 390.6 KiB | 00m00s >>> Running pre-install scriptlet: authselect-libs-0:1.5.0-3.fc40.x86_64 >>> Stop pre-install scriptlet: authselect-libs-0:1.5.0-3.fc40.x86_64 [100/146] Installing authselect-libs-0: 100% | 195.9 MiB/s | 1.0 MiB | 00m00s [101/146] Installing krb5-libs-0:1.21.2 100% | 286.8 MiB/s | 2.3 MiB | 00m00s [102/146] Installing libtirpc-0:1.3.4-1 100% | 99.9 MiB/s | 204.6 KiB | 00m00s [103/146] Installing libcurl-minimal-0: 100% | 292.8 MiB/s | 599.6 KiB | 00m00s [104/146] Installing elfutils-libs-0:0. 100% | 314.4 MiB/s | 644.0 KiB | 00m00s [105/146] Installing elfutils-debuginfo 100% | 65.3 MiB/s | 66.9 KiB | 00m00s [106/146] Installing binutils-gold-0:2. 100% | 184.6 MiB/s | 2.0 MiB | 00m00s >>> Running post-install scriptlet: binutils-gold-0:2.41-32.fc40.x86_64 >>> Stop post-install scriptlet: binutils-gold-0:2.41-32.fc40.x86_64 [107/146] Installing binutils-0:2.41-32 100% | 366.7 MiB/s | 26.4 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.41-32.fc40.x86_64 >>> Stop post-install scriptlet: binutils-0:2.41-32.fc40.x86_64 [108/146] Installing elfutils-0:0.190-6 100% | 316.1 MiB/s | 2.5 MiB | 00m00s [109/146] Installing gdb-minimal-0:14.1 100% | 383.4 MiB/s | 12.3 MiB | 00m00s [110/146] Installing debugedit-0:5.0-14 100% | 197.0 MiB/s | 201.7 KiB | 00m00s [111/146] Installing curl-0:8.6.0-4.fc4 100% | 359.8 MiB/s | 736.9 KiB | 00m00s [112/146] Installing libnsl2-0:2.0.1-1. 100% | 57.7 MiB/s | 59.0 KiB | 00m00s [113/146] Installing authselect-0:1.5.0 100% | 78.6 MiB/s | 160.9 KiB | 00m00s [114/146] Installing cracklib-0:2.9.11- 100% | 81.5 MiB/s | 250.3 KiB | 00m00s [115/146] Installing libpwquality-0:1.4 100% | 84.0 MiB/s | 430.1 KiB | 00m00s [116/146] Installing pam-0:1.6.0-1.fc40 100% | 150.9 MiB/s | 1.8 MiB | 00m00s [117/146] Installing libarchive-0:3.7.2 100% | 298.4 MiB/s | 916.6 KiB | 00m00s [118/146] Installing rpm-sequoia-0:1.6. 100% | 371.5 MiB/s | 2.2 MiB | 00m00s [119/146] Installing rpm-libs-0:4.19.1. 100% | 63.2 MiB/s | 711.4 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Stop pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 [120/146] Installing rpm-0:4.19.1.1-1.f 100% | 171.2 MiB/s | 2.4 MiB | 00m00s [121/146] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [122/146] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [123/146] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [124/146] Installing rpm-build-libs-0:4 100% | 97.3 MiB/s | 199.2 KiB | 00m00s [125/146] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.8 KiB | 00m00s [126/146] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [127/146] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 768.0 B | 00m00s [128/146] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [129/146] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [130/146] Installing openblas-srpm-macr 100% | 0.0 B/s | 384.0 B | 00m00s [131/146] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [132/146] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [133/146] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [134/146] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 648.0 B | 00m00s [135/146] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [136/146] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [137/146] Installing fonts-srpm-macros- 100% | 55.1 MiB/s | 56.5 KiB | 00m00s [138/146] Installing forge-srpm-macros- 100% | 0.0 B/s | 38.6 KiB | 00m00s [139/146] Installing go-srpm-macros-0:3 100% | 60.2 MiB/s | 61.6 KiB | 00m00s [140/146] Installing python-srpm-macros 100% | 50.1 MiB/s | 51.3 KiB | 00m00s [141/146] Installing redhat-rpm-config- 100% | 92.6 MiB/s | 189.6 KiB | 00m00s [142/146] Installing rpm-build-0:4.19.1 100% | 88.8 MiB/s | 182.0 KiB | 00m00s [143/146] Installing pyproject-srpm-mac 100% | 2.0 MiB/s | 2.1 KiB | 00m00s [144/146] Installing util-linux-0:2.40- 100% | 177.1 MiB/s | 3.7 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40-0.8.rc1.fc40.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40-0.8.rc1.fc40.x86_64 [145/146] Installing which-0:2.21-41.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s [146/146] Installing info-0:7.1-2.fc40. 100% | 415.0 KiB/s | 358.2 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-3.fc40.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-3.fc40.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.39-2.fc40.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39-2.fc40.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.x86_64 ansible-srpm-macros-1-14.fc40.noarch audit-libs-4.0-8.fc40.x86_64 authselect-1.5.0-3.fc40.x86_64 authselect-libs-1.5.0-3.fc40.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.41-32.fc40.x86_64 binutils-gold-2.41-32.fc40.x86_64 bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.4-6.fc40.x86_64 coreutils-common-9.4-6.fc40.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240201-1.git9f501f3.fc40.noarch curl-8.6.0-4.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20-2.fc40.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.190-6.fc40.x86_64 elfutils-debuginfod-client-0.190-6.fc40.x86_64 elfutils-default-yama-scope-0.190-6.fc40.noarch elfutils-libelf-0.190-6.fc40.x86_64 elfutils-libs-0.190-6.fc40.x86_64 fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.30.noarch fedora-release-common-40-0.30.noarch fedora-release-identity-basic-40-0.30.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-4.fc40.x86_64 file-libs-5.45-4.fc40.x86_64 filesystem-3.18-8.fc40.x86_64 findutils-4.9.0-8.fc40.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.2.0-3.fc40.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.1-8.fc40.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.6.1-5.fc40.noarch glibc-2.39-2.fc40.x86_64 glibc-common-2.39-2.fc40.x86_64 glibc-gconv-extra-2.39-2.fc40.x86_64 glibc-minimal-langpack-2.39-2.fc40.x86_64 gmp-6.2.1-8.fc40.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.4.0-2.fc40.noarch gpg-pubkey-18b8e74c-62f2920f gpg-pubkey-a15b79cc-63d04c2c grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-22.fc40.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-3.fc40.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40-0.8.rc1.fc40.x86_64 libcap-2.69-3.fc40.x86_64 libcap-ng-0.8.4-4.fc40.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-minimal-8.6.0-4.fc40.x86_64 libeconf-0.5.2-3.fc40.x86_64 libfdisk-2.40-0.8.rc1.fc40.x86_64 libffi-3.4.4-7.fc40.x86_64 libgcc-14.0.1-0.6.fc40.x86_64 libgomp-14.0.1-0.6.fc40.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40-0.8.rc1.fc40.x86_64 libnghttp2-1.59.0-2.fc40.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-1.9.5-4.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40-0.8.rc1.fc40.x86_64 libstdc++-14.0.1-0.6.fc40.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc2.fc40.2.x86_64 libunistring-1.1-7.fc40.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40-0.8.rc1.fc40.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.5-1.fc40.x86_64 libzstd-1.5.5-5.fc40.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-11.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-3.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-16.fc40.noarch openssl-libs-3.2.1-2.fc40.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.0-1.fc40.x86_64 pam-libs-1.6.0-1.fc40.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.42-2.fc40.2.x86_64 pcre2-syntax-10.42-2.fc40.2.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-1.9.5-4.fc40.x86_64 pkgconf-m4-1.9.5-4.fc40.noarch pkgconf-pkg-config-1.9.5-4.fc40.x86_64 popt-1.19-6.fc40.x86_64 pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-7.fc40.noarch qt5-srpm-macros-5.15.12-3.fc40.noarch qt6-srpm-macros-6.6.1-5.fc40.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-282-1.fc40.noarch rpm-4.19.1.1-1.fc40.x86_64 rpm-build-4.19.1.1-1.fc40.x86_64 rpm-build-libs-4.19.1.1-1.fc40.x86_64 rpm-libs-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 rust-srpm-macros-25.2-4.fc40.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-4.14.0-5.fc40.x86_64 sqlite-libs-3.45.1-2.fc40.x86_64 systemd-libs-255.3-1.fc40.x86_64 tar-1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40-0.8.rc1.fc40.x86_64 util-linux-core-2.40-0.8.rc1.fc40.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.4.6-1.fc40.x86_64 xz-libs-5.4.6-1.fc40.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-2.fc40.x86_64 zstd-1.5.5-5.fc40.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707436800 Wrote: /builddir/build/SRPMS/snakemake-8.4.8-1.fc40.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-x86_64-1707906836.488850/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1707906836.488850/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-s9x9q8qb/snakemake/snakemake.spec) Config(child) 0 minutes 16 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-8.4.8-1.fc40.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1707906836.488850/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1707906836.488850/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1707906836.488850/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 python3-dnf-4.19.0-1.fc40.noarch yum-4.19.0-1.fc40.noarch dnf5-5.1.12-1.fc40.x86_64 dnf5-plugins-5.1.12-1.fc40.x86_64 Finish: chroot init Start: build phase for snakemake-8.4.8-1.fc40.src.rpm Start: build setup for snakemake-8.4.8-1.fc40.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707436800 Wrote: /builddir/build/SRPMS/snakemake-8.4.8-1.fc40.src.rpm Updating and loading repositories: fedora 100% | 145.0 KiB/s | 22.0 KiB | 00m00s Copr repository 100% | 72.7 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 3.7 MiB/s | 141.2 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: help2man noarch 1.49.3-5.fc40 fedora 415.6 KiB python3-boto3 noarch 1.34.39-1.fc40 fedora 1.8 MiB python3-devel x86_64 3.12.2-1.fc40 fedora 1.2 MiB python3-flask noarch 1:3.0.2-1.fc40 fedora 873.5 KiB python3-google-cloud-storage noarch 2.14.0-4.fc40 fedora 1.2 MiB python3-pandas x86_64 1.5.3-7.fc39~bootstrap fedora 39.2 MiB python3-pytest noarch 7.4.3-3.fc40 fedora 15.0 MiB python3-snakemake-executor-plugin-cluster-generic noarch 1.0.7-3.fc40 copr_base 38.1 KiB python3-snakemake-storage-plugin-s3 noarch 0.2.8-3.fc40 copr_base 35.8 KiB vim-filesystem noarch 2:9.1.083-1.fc40 fedora 40.0 B Installing dependencies: abseil-cpp x86_64 20240116.0-1.fc40 fedora 2.4 MiB c-ares x86_64 1.25.0-3.fc40 fedora 395.1 KiB expat x86_64 2.5.0-5.fc40 fedora 266.7 KiB flexiblas x86_64 3.4.1-3.fc40 fedora 46.7 KiB flexiblas-netlib x86_64 3.4.1-3.fc40 fedora 10.2 MiB flexiblas-openblas-openmp x86_64 3.4.1-3.fc40 fedora 39.3 KiB google-crc32c x86_64 1.1.2-9.fc40 fedora 24.1 KiB groff-base x86_64 1.23.0-6.fc40 fedora 3.8 MiB grpc-data noarch 1.48.4-34.fc40 fedora 29.6 KiB libb2 x86_64 0.98.1-11.fc40 fedora 42.2 KiB libgfortran x86_64 14.0.1-0.6.fc40 fedora 2.9 MiB libquadmath x86_64 14.0.1-0.6.fc40 fedora 329.9 KiB mpdecimal x86_64 2.5.1-9.fc40 fedora 200.9 KiB ncurses x86_64 6.4-12.20240127.fc40 fedora 621.0 KiB openblas x86_64 0.3.26-4.fc40 fedora 96.0 KiB openblas-openmp x86_64 0.3.26-4.fc40 fedora 38.9 MiB perl-AutoLoader noarch 5.74-506.fc40 fedora 20.5 KiB perl-B x86_64 1.88-506.fc40 fedora 492.4 KiB perl-Carp noarch 1.54-502.fc40 fedora 46.5 KiB perl-Class-Struct noarch 0.68-506.fc40 fedora 25.4 KiB perl-Data-Dumper x86_64 2.188-503.fc40 fedora 111.7 KiB perl-Digest noarch 1.20-502.fc40 fedora 35.2 KiB perl-Digest-MD5 x86_64 2.59-3.fc40 fedora 59.7 KiB perl-DynaLoader x86_64 1.54-506.fc40 fedora 32.1 KiB perl-Encode x86_64 4:3.20-503.fc40 fedora 4.7 MiB perl-Errno x86_64 1.37-506.fc40 fedora 8.3 KiB perl-Exporter noarch 5.78-3.fc40 fedora 54.2 KiB perl-Fcntl x86_64 1.15-506.fc40 fedora 24.6 KiB perl-File-Basename noarch 2.86-506.fc40 fedora 14.0 KiB perl-File-Path noarch 2.18-503.fc40 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.100-503.fc40 fedora 162.3 KiB perl-File-stat noarch 1.13-506.fc40 fedora 12.7 KiB perl-FileHandle noarch 2.05-506.fc40 fedora 9.3 KiB perl-Getopt-Long noarch 1:2.57-3.fc40 fedora 144.1 KiB perl-Getopt-Std noarch 1.13-506.fc40 fedora 11.1 KiB perl-HTTP-Tiny noarch 0.088-5.fc40 fedora 152.1 KiB perl-IO x86_64 1.52-506.fc40 fedora 151.0 KiB perl-IO-Socket-IP noarch 0.42-2.fc40 fedora 98.6 KiB perl-IO-Socket-SSL noarch 2.085-1.fc40 fedora 685.0 KiB perl-IPC-Open3 noarch 1.22-506.fc40 fedora 22.4 KiB perl-MIME-Base64 x86_64 3.16-503.fc40 fedora 46.1 KiB perl-Mozilla-CA noarch 20231213-3.fc40 fedora 9.1 KiB perl-Net-SSLeay x86_64 1.94-3.fc40 fedora 1.3 MiB perl-POSIX x86_64 2.13-506.fc40 fedora 229.0 KiB perl-PathTools x86_64 3.89-502.fc40 fedora 179.6 KiB perl-Pod-Escapes noarch 1:1.07-503.fc40 fedora 24.9 KiB perl-Pod-Perldoc noarch 3.28.01-503.fc40 fedora 163.1 KiB perl-Pod-Simple noarch 1:3.45-6.fc40 fedora 559.8 KiB perl-Pod-Usage noarch 4:2.03-503.fc40 fedora 84.7 KiB perl-Scalar-List-Utils x86_64 5:1.63-503.fc40 fedora 145.5 KiB perl-SelectSaver noarch 1.02-506.fc40 fedora 2.2 KiB perl-Socket x86_64 4:2.037-5.fc40 fedora 123.6 KiB perl-Storable x86_64 1:3.32-502.fc40 fedora 232.3 KiB perl-Symbol noarch 1.09-506.fc40 fedora 6.8 KiB perl-Term-ANSIColor noarch 5.01-504.fc40 fedora 97.5 KiB perl-Term-Cap noarch 1.18-503.fc40 fedora 29.3 KiB perl-Text-ParseWords noarch 3.31-502.fc40 fedora 13.5 KiB perl-Text-Tabs+Wrap noarch 2023.0511-5.fc40 fedora 23.4 KiB perl-Time-Local noarch 2:1.350-5.fc40 fedora 68.9 KiB perl-URI noarch 5.27-1.fc40 fedora 239.8 KiB perl-base noarch 2.27-506.fc40 fedora 12.5 KiB perl-constant noarch 1.33-503.fc40 fedora 26.2 KiB perl-if noarch 0.61.000-506.fc40 fedora 5.8 KiB perl-interpreter x86_64 4:5.38.2-506.fc40 fedora 119.8 KiB perl-libnet noarch 3.15-503.fc40 fedora 289.0 KiB perl-libs x86_64 4:5.38.2-506.fc40 fedora 9.8 MiB perl-locale noarch 1.10-506.fc40 fedora 6.2 KiB perl-mro x86_64 1.28-506.fc40 fedora 41.6 KiB perl-overload noarch 1.37-506.fc40 fedora 71.5 KiB perl-overloading noarch 0.02-506.fc40 fedora 4.8 KiB perl-parent noarch 1:0.241-502.fc40 fedora 9.7 KiB perl-podlators noarch 1:5.01-502.fc40 fedora 308.1 KiB perl-vars noarch 1.05-506.fc40 fedora 3.9 KiB protobuf x86_64 3.19.6-8.fc40 fedora 3.3 MiB pyproject-rpm-macros noarch 1.12.0-1.fc40 fedora 98.8 KiB python-pip-wheel noarch 23.3.2-1.fc40 fedora 1.5 MiB python-rpm-macros noarch 3.12-7.fc40 fedora 22.1 KiB python3 x86_64 3.12.2-1.fc40 fedora 31.9 KiB python3-argparse-dataclass noarch 2.0.0-5.fc40 fedora 50.0 KiB python3-blinker noarch 1.7.0-1.fc40 fedora 108.8 KiB python3-botocore noarch 1.34.39-1.fc40 fedora 89.2 MiB python3-cachetools noarch 5.3.2-3.fc40 fedora 142.0 KiB python3-charset-normalizer noarch 3.3.2-3.fc40 fedora 312.7 KiB python3-click noarch 8.1.7-4.fc40 fedora 1.1 MiB python3-configargparse noarch 1.7-3.fc40 fedora 240.2 KiB python3-dateutil noarch 1:2.8.2-13.fc40 fedora 877.8 KiB python3-google-api-core noarch 1:2.11.1-7.fc40 fedora 809.2 KiB python3-google-auth noarch 1:2.27.0-1.fc40 fedora 1.2 MiB python3-google-cloud-core noarch 2.3.3-4.fc40 fedora 181.8 KiB python3-google-crc32c x86_64 1.5.0-3.fc40 fedora 62.1 KiB python3-google-resumable-media noarch 2.7.0-3.fc40 fedora 663.8 KiB python3-googleapis-common-protos noarch 1.62.0-9.fc40 fedora 775.7 KiB python3-grpcio x86_64 1.48.4-34.fc40 fedora 7.4 MiB python3-grpcio-status noarch 1.48.4-34.fc40 fedora 14.1 KiB python3-idna noarch 3.6-3.fc40 fedora 502.3 KiB python3-iniconfig noarch 1.1.1-16.fc40 fedora 20.5 KiB python3-itsdangerous noarch 2.1.2-7.fc40 fedora 95.5 KiB python3-jinja2 noarch 3.1.3-3.fc40 fedora 3.0 MiB python3-jmespath noarch 1.0.1-6.fc40 fedora 148.5 KiB python3-libs x86_64 3.12.2-1.fc40 fedora 41.0 MiB python3-markupsafe x86_64 2.1.3-4.fc40 fedora 56.3 KiB python3-numpy x86_64 1:1.26.2-4.fc40 fedora 44.0 MiB python3-packaging noarch 23.2-4.fc40 fedora 421.1 KiB python3-pluggy noarch 1.3.0-3.fc40 fedora 182.5 KiB python3-protobuf x86_64 3.19.6-8.fc40 fedora 1.9 MiB python3-pyasn1 noarch 0.5.1-3.fc40 fedora 881.5 KiB python3-pyasn1-modules noarch 0.5.1-3.fc40 fedora 1.7 MiB python3-pytz noarch 2024.1-1.fc40 fedora 225.8 KiB python3-requests noarch 2.31.0-3.fc40 fedora 462.4 KiB python3-reretry noarch 0.11.8-8.fc40 fedora 32.1 KiB python3-rpm-generators noarch 14-10.fc40 fedora 81.7 KiB python3-rpm-macros noarch 3.12-7.fc40 fedora 6.4 KiB python3-rsa noarch 4.9-5.fc40 fedora 240.7 KiB python3-s3transfer noarch 0.10.0-3.fc40 fedora 619.6 KiB python3-setuptools noarch 69.0.3-2.fc40 fedora 7.1 MiB python3-six noarch 1.16.0-14.fc40 fedora 117.7 KiB python3-snakemake-interface-common noarch 1.15.3-1.fc40 copr_base 87.3 KiB python3-snakemake-interface-executor-plugins noarch 8.2.0-2.fc40 copr_base 136.4 KiB python3-snakemake-interface-storage-plugins noarch 3.0.0-5.fc40 copr_base 105.3 KiB python3-throttler noarch 1.2.2-9.fc40 fedora 33.5 KiB python3-urllib3 noarch 1.26.18-3.fc40 fedora 996.2 KiB python3-werkzeug noarch 3.0.1-3.fc40 fedora 1.8 MiB python3-wrapt x86_64 1.16.0-3.fc40 fedora 196.0 KiB re2 x86_64 1:20220601-5.fc40 fedora 492.9 KiB tzdata noarch 2024a-2.fc40 fedora 1.6 MiB Transaction Summary: Installing: 135 packages Total size of inbound packages is 65 MiB. Need to download 22 MiB. After this operation 358 MiB will be used (install 358 MiB, remove 0 B). [ 1/135] python3-pandas-0:1.5.3-7.fc39 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 2/135] python3-pytest-0:7.4.3-3.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 3/135] python3-devel-0:3.12.2-1.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 4/135] python3-click-0:8.1.7-4.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/135] python3-jinja2-0:3.1.3-3.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/135] python3-requests-0:2.31.0-3.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 7/135] python3-dateutil-1:2.8.2-13.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/135] python3-numpy-1:1.26.2-4.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 9/135] python3-pytz-0:2024.1-1.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 10/135] python3-iniconfig-0:1.1.1-16. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 11/135] python3-packaging-0:23.2-4.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 12/135] python3-pluggy-0:1.3.0-3.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 13/135] python3-libs-0:3.12.2-1.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 14/135] python3-urllib3-0:1.26.18-3.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 15/135] python3-markupsafe-0:2.1.3-4. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 16/135] python3-charset-normalizer-0: 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 17/135] python3-idna-0:3.6-3.fc40.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 18/135] python3-six-0:1.16.0-14.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 19/135] tzdata-0:2024a-2.fc40.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 20/135] flexiblas-netlib-0:3.4.1-3.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 21/135] expat-0:2.5.0-5.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 22/135] libb2-0:0.98.1-11.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 23/135] mpdecimal-0:2.5.1-9.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 24/135] python-pip-wheel-0:23.3.2-1.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 25/135] re2-1:20220601-5.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 26/135] protobuf-0:3.19.6-8.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 27/135] python3-setuptools-0:69.0.3-2 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 28/135] flexiblas-0:3.4.1-3.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 29/135] flexiblas-openblas-openmp-0:3 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 30/135] libgfortran-0:14.0.1-0.6.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 31/135] libquadmath-0:14.0.1-0.6.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 32/135] openblas-openmp-0:0.3.26-4.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 33/135] pyproject-rpm-macros-0:1.12.0 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 34/135] python-rpm-macros-0:3.12-7.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 35/135] python3-rpm-generators-0:14-1 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 36/135] python3-rpm-macros-0:3.12-7.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 37/135] python3-0:3.12.2-1.fc40.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 38/135] openblas-0:0.3.26-4.fc40.x86_ 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 39/135] help2man-0:1.49.3-5.fc40.noar 100% | 14.8 MiB/s | 227.8 KiB | 00m00s [ 40/135] python3-google-cloud-storage- 100% | 194.7 MiB/s | 199.4 KiB | 00m00s [ 41/135] vim-filesystem-2:9.1.083-1.fc 100% | 8.6 MiB/s | 17.6 KiB | 00m00s [ 42/135] python3-boto3-0:1.34.39-1.fc4 100% | 14.9 MiB/s | 365.4 KiB | 00m00s [ 43/135] python3-snakemake-executor-pl 100% | 3.3 MiB/s | 23.6 KiB | 00m00s [ 44/135] perl-Getopt-Long-1:2.57-3.fc4 100% | 20.6 MiB/s | 63.2 KiB | 00m00s [ 45/135] python3-flask-1:3.0.2-1.fc40. 100% | 6.8 MiB/s | 207.8 KiB | 00m00s >>> Downloading successful, but checksum doesn't match. Calculated: 4558e42f3895 [ 46/135] python3-snakemake-storage-plu 100% | 2.8 MiB/s | 22.8 KiB | 00m00s [ 47/135] perl-Text-ParseWords-0:3.31-5 100% | 8.0 MiB/s | 16.3 KiB | 00m00s [ 48/135] perl-POSIX-0:2.13-506.fc40.x8 100% | 23.7 MiB/s | 96.9 KiB | 00m00s [ 49/135] perl-Text-Tabs+Wrap-0:2023.05 100% | 5.4 MiB/s | 22.1 KiB | 00m00s [ 50/135] perl-interpreter-4:5.38.2-506 100% | 17.6 MiB/s | 72.3 KiB | 00m00s [ 51/135] python3-jmespath-0:1.0.1-6.fc 100% | 5.3 MiB/s | 59.3 KiB | 00m00s [ 52/135] python3-blinker-0:1.7.0-1.fc4 100% | 7.6 MiB/s | 39.1 KiB | 00m00s >>> Downloading successful, but checksum doesn't match. Calculated: 861f062a5e55 [ 53/135] python3-itsdangerous-0:2.1.2- 100% | 3.8 MiB/s | 46.3 KiB | 00m00s [ 54/135] python3-s3transfer-0:0.10.0-3 100% | 4.2 MiB/s | 152.1 KiB | 00m00s >>> Downloading successful, but checksum doesn't match. Calculated: bc2e0cb40ff7 [ 55/135] python3-werkzeug-0:3.0.1-3.fc 100% | 25.2 MiB/s | 465.0 KiB | 00m00s [ 56/135] python3-google-api-core-1:2.1 100% | 9.3 MiB/s | 200.0 KiB | 00m00s [ 57/135] python3-botocore-0:1.34.39-1. 100% | 96.3 MiB/s | 6.9 MiB | 00m00s [ 58/135] python3-google-auth-1:2.27.0- 100% | 12.2 MiB/s | 274.8 KiB | 00m00s [ 59/135] python3-google-cloud-core-0:2 100% | 4.4 MiB/s | 71.6 KiB | 00m00s [ 60/135] perl-Exporter-0:5.78-3.fc40.n 100% | 0.0 B/s | 30.8 KiB | 00m00s [ 61/135] perl-base-0:2.27-506.fc40.noa 100% | 0.0 B/s | 16.6 KiB | 00m00s [ 62/135] perl-constant-0:1.33-503.fc40 100% | 0.0 B/s | 22.8 KiB | 00m00s [ 63/135] perl-overload-0:1.37-506.fc40 100% | 0.0 B/s | 46.0 KiB | 00m00s [ 64/135] python3-google-resumable-medi 100% | 13.8 MiB/s | 99.0 KiB | 00m00s [ 65/135] perl-Carp-0:1.54-502.fc40.noa 100% | 0.0 B/s | 28.7 KiB | 00m00s [ 66/135] perl-Fcntl-0:1.15-506.fc40.x8 100% | 0.0 B/s | 20.6 KiB | 00m00s [ 67/135] perl-locale-0:1.10-506.fc40.n 100% | 0.0 B/s | 14.1 KiB | 00m00s [ 68/135] python3-google-crc32c-0:1.5.0 100% | 3.3 MiB/s | 36.9 KiB | 00m00s [ 69/135] perl-libs-4:5.38.2-506.fc40.x 100% | 389.8 MiB/s | 2.3 MiB | 00m00s [ 70/135] python3-googleapis-common-pro 100% | 20.1 MiB/s | 226.0 KiB | 00m00s [ 71/135] python3-grpcio-0:1.48.4-34.fc 100% | 80.0 MiB/s | 2.3 MiB | 00m00s [ 72/135] python3-cachetools-0:5.3.2-3. 100% | 0.0 B/s | 37.1 KiB | 00m00s [ 73/135] python3-grpcio-status-0:1.48. 100% | 742.6 KiB/s | 21.5 KiB | 00m00s [ 74/135] python3-pyasn1-modules-0:0.5. 100% | 30.7 MiB/s | 377.6 KiB | 00m00s [ 75/135] python3-rsa-0:4.9-5.fc40.noar 100% | 4.1 MiB/s | 80.7 KiB | 00m00s [ 76/135] perl-Scalar-List-Utils-5:1.63 100% | 71.2 MiB/s | 72.9 KiB | 00m00s [ 77/135] perl-mro-0:1.28-506.fc40.x86_ 100% | 0.0 B/s | 29.3 KiB | 00m00s [ 78/135] perl-overloading-0:0.02-506.f 100% | 0.0 B/s | 13.3 KiB | 00m00s [ 79/135] perl-DynaLoader-0:1.54-506.fc 100% | 0.0 B/s | 26.5 KiB | 00m00s [ 80/135] perl-PathTools-0:3.89-502.fc4 100% | 0.0 B/s | 87.4 KiB | 00m00s [ 81/135] python3-protobuf-0:3.19.6-8.f 100% | 7.6 MiB/s | 411.1 KiB | 00m00s [ 82/135] abseil-cpp-0:20240116.0-1.fc4 100% | 35.4 MiB/s | 689.4 KiB | 00m00s [ 83/135] google-crc32c-0:1.1.2-9.fc40. 100% | 534.2 KiB/s | 22.4 KiB | 00m00s [ 84/135] grpc-data-0:1.48.4-34.fc40.no 100% | 1.5 MiB/s | 23.1 KiB | 00m00s [ 85/135] perl-vars-0:1.05-506.fc40.noa 100% | 13.1 MiB/s | 13.4 KiB | 00m00s [ 86/135] perl-Errno-0:1.37-506.fc40.x8 100% | 0.0 B/s | 15.4 KiB | 00m00s [ 87/135] python3-snakemake-interface-c 100% | 40.8 MiB/s | 41.8 KiB | 00m00s [ 88/135] python3-pyasn1-0:0.5.1-3.fc40 100% | 8.7 MiB/s | 197.1 KiB | 00m00s [ 89/135] python3-argparse-dataclass-0: 100% | 1.1 MiB/s | 19.7 KiB | 00m00s [ 90/135] python3-snakemake-interface-s 100% | 36.2 MiB/s | 37.1 KiB | 00m00s [ 91/135] python3-reretry-0:0.11.8-8.fc 100% | 17.8 MiB/s | 18.2 KiB | 00m00s [ 92/135] python3-configargparse-0:1.7- 100% | 4.6 MiB/s | 52.4 KiB | 00m00s [ 93/135] c-ares-0:1.25.0-3.fc40.x86_64 100% | 2.0 MiB/s | 147.6 KiB | 00m00s [ 94/135] python3-wrapt-0:1.16.0-3.fc40 100% | 2.6 MiB/s | 72.4 KiB | 00m00s [ 95/135] perl-Encode-4:3.20-503.fc40.x 100% | 529.0 MiB/s | 1.1 MiB | 00m00s [ 96/135] python3-snakemake-interface-e 100% | 3.4 MiB/s | 52.6 KiB | 00m00s [ 97/135] perl-File-Basename-0:2.86-506 100% | 0.0 B/s | 17.6 KiB | 00m00s [ 98/135] perl-Getopt-Std-0:1.13-506.fc 100% | 0.0 B/s | 16.1 KiB | 00m00s [ 99/135] perl-MIME-Base64-0:3.16-503.f 100% | 0.0 B/s | 29.7 KiB | 00m00s [100/135] perl-Storable-1:3.32-502.fc40 100% | 0.0 B/s | 98.2 KiB | 00m00s [101/135] perl-parent-1:0.241-502.fc40. 100% | 0.0 B/s | 14.7 KiB | 00m00s [102/135] perl-IO-0:1.52-506.fc40.x86_6 100% | 0.0 B/s | 82.7 KiB | 00m00s [103/135] perl-File-stat-0:1.13-506.fc4 100% | 0.0 B/s | 17.6 KiB | 00m00s [104/135] perl-SelectSaver-0:1.02-506.f 100% | 0.0 B/s | 12.2 KiB | 00m00s [105/135] perl-Socket-4:2.037-5.fc40.x8 100% | 0.0 B/s | 54.5 KiB | 00m00s [106/135] python3-throttler-0:1.2.2-9.f 100% | 796.1 KiB/s | 27.9 KiB | 00m00s [107/135] perl-Symbol-0:1.09-506.fc40.n 100% | 0.0 B/s | 14.6 KiB | 00m00s [108/135] perl-Class-Struct-0:0.68-506. 100% | 0.0 B/s | 22.5 KiB | 00m00s [109/135] perl-Pod-Perldoc-0:3.28.01-50 100% | 0.0 B/s | 85.6 KiB | 00m00s [110/135] perl-podlators-1:5.01-502.fc4 100% | 0.0 B/s | 125.5 KiB | 00m00s [111/135] perl-File-Temp-1:0.231.100-50 100% | 0.0 B/s | 59.0 KiB | 00m00s [112/135] perl-Pod-Usage-4:2.03-503.fc4 100% | 19.4 MiB/s | 39.7 KiB | 00m00s [113/135] perl-HTTP-Tiny-0:0.088-5.fc40 100% | 0.0 B/s | 55.6 KiB | 00m00s [114/135] groff-base-0:1.23.0-6.fc40.x8 100% | 366.1 MiB/s | 1.1 MiB | 00m00s [115/135] perl-IPC-Open3-0:1.22-506.fc4 100% | 21.8 MiB/s | 22.3 KiB | 00m00s [116/135] perl-Pod-Simple-1:3.45-6.fc40 100% | 213.4 MiB/s | 218.5 KiB | 00m00s [117/135] perl-Term-ANSIColor-0:5.01-50 100% | 0.0 B/s | 47.6 KiB | 00m00s [118/135] perl-Term-Cap-0:1.18-503.fc40 100% | 0.0 B/s | 21.9 KiB | 00m00s [119/135] perl-File-Path-0:2.18-503.fc4 100% | 0.0 B/s | 35.0 KiB | 00m00s [120/135] perl-Mozilla-CA-0:20231213-3. 100% | 0.0 B/s | 13.9 KiB | 00m00s [121/135] perl-IO-Socket-SSL-0:2.085-1. 100% | 223.3 MiB/s | 228.6 KiB | 00m00s [122/135] perl-Net-SSLeay-0:1.94-3.fc40 100% | 375.9 MiB/s | 384.9 KiB | 00m00s [123/135] perl-Time-Local-2:1.350-5.fc4 100% | 33.5 MiB/s | 34.3 KiB | 00m00s [124/135] perl-Pod-Escapes-1:1.07-503.f 100% | 0.0 B/s | 19.6 KiB | 00m00s [125/135] perl-if-0:0.61.000-506.fc40.n 100% | 0.0 B/s | 14.4 KiB | 00m00s [126/135] perl-IO-Socket-IP-0:0.42-2.fc 100% | 0.0 B/s | 41.7 KiB | 00m00s [127/135] perl-URI-0:5.27-1.fc40.noarch 100% | 0.0 B/s | 132.5 KiB | 00m00s [128/135] ncurses-0:6.4-12.20240127.fc4 100% | 411.4 MiB/s | 421.2 KiB | 00m00s [129/135] perl-AutoLoader-0:5.74-506.fc 100% | 0.0 B/s | 21.7 KiB | 00m00s [130/135] perl-Data-Dumper-0:2.188-503. 100% | 0.0 B/s | 56.0 KiB | 00m00s [131/135] perl-libnet-0:3.15-503.fc40.n 100% | 0.0 B/s | 128.5 KiB | 00m00s [132/135] perl-Digest-MD5-0:2.59-3.fc40 100% | 0.0 B/s | 35.8 KiB | 00m00s [133/135] perl-B-0:1.88-506.fc40.x86_64 100% | 172.2 MiB/s | 176.3 KiB | 00m00s [134/135] perl-FileHandle-0:2.05-506.fc 100% | 0.0 B/s | 15.9 KiB | 00m00s [135/135] perl-Digest-0:1.20-502.fc40.n 100% | 0.0 B/s | 24.6 KiB | 00m00s -------------------------------------------------------------------------------- [135/135] Total 100% | 46.0 MiB/s | 22.2 MiB | 00m00s Running transaction [ 1/137] Verify package files 100% | 494.0 B/s | 135.0 B | 00m00s [ 2/137] Prepare transaction 100% | 1.7 KiB/s | 135.0 B | 00m00s [ 3/137] Installing python-rpm-macros- 100% | 5.6 MiB/s | 22.8 KiB | 00m00s [ 4/137] Installing tzdata-0:2024a-2.f 100% | 63.3 MiB/s | 1.9 MiB | 00m00s [ 5/137] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 6/137] Installing libgfortran-0:14.0 100% | 367.8 MiB/s | 2.9 MiB | 00m00s [ 7/137] Installing pyproject-rpm-macr 100% | 98.4 MiB/s | 100.8 KiB | 00m00s [ 8/137] Installing ncurses-0:6.4-12.2 100% | 68.1 MiB/s | 627.6 KiB | 00m00s >>> Running pre-install scriptlet: groff-base-0:1.23.0-6.fc40.x86_64 >>> Stop pre-install scriptlet: groff-base-0:1.23.0-6.fc40.x86_64 [ 9/137] Installing groff-base-0:1.23. 100% | 192.9 MiB/s | 3.9 MiB | 00m00s >>> Running post-install scriptlet: groff-base-0:1.23.0-6.fc40.x86_64 >>> Stop post-install scriptlet: groff-base-0:1.23.0-6.fc40.x86_64 [ 10/137] Installing perl-Digest-0:1.20 100% | 36.1 MiB/s | 37.0 KiB | 00m00s [ 11/137] Installing perl-B-0:1.88-506. 100% | 242.1 MiB/s | 495.7 KiB | 00m00s [ 12/137] Installing perl-FileHandle-0: 100% | 0.0 B/s | 9.8 KiB | 00m00s [ 13/137] Installing perl-Digest-MD5-0: 100% | 60.2 MiB/s | 61.6 KiB | 00m00s [ 14/137] Installing perl-Data-Dumper-0 100% | 110.9 MiB/s | 113.6 KiB | 00m00s [ 15/137] Installing perl-libnet-0:3.15 100% | 143.7 MiB/s | 294.3 KiB | 00m00s [ 16/137] Installing perl-AutoLoader-0: 100% | 20.5 MiB/s | 20.9 KiB | 00m00s [ 17/137] Installing perl-URI-0:5.27-1. 100% | 81.8 MiB/s | 251.4 KiB | 00m00s [ 18/137] Installing perl-Text-Tabs+Wra 100% | 0.0 B/s | 24.7 KiB | 00m00s [ 19/137] Installing perl-locale-0:1.10 100% | 0.0 B/s | 6.6 KiB | 00m00s [ 20/137] Installing perl-File-Path-0:2 100% | 63.0 MiB/s | 64.5 KiB | 00m00s [ 21/137] Installing perl-Mozilla-CA-0: 100% | 0.0 B/s | 10.2 KiB | 00m00s [ 22/137] Installing perl-Time-Local-2: 100% | 68.9 MiB/s | 70.5 KiB | 00m00s [ 23/137] Installing perl-Pod-Escapes-1 100% | 0.0 B/s | 25.9 KiB | 00m00s [ 24/137] Installing perl-if-0:0.61.000 100% | 0.0 B/s | 6.2 KiB | 00m00s [ 25/137] Installing perl-IO-Socket-IP- 100% | 98.1 MiB/s | 100.4 KiB | 00m00s [ 26/137] Installing perl-Net-SSLeay-0: 100% | 272.5 MiB/s | 1.4 MiB | 00m00s [ 27/137] Installing perl-IO-Socket-SSL 100% | 336.4 MiB/s | 689.0 KiB | 00m00s [ 28/137] Installing perl-POSIX-0:2.13- 100% | 224.9 MiB/s | 230.3 KiB | 00m00s [ 29/137] Installing perl-Class-Struct- 100% | 0.0 B/s | 25.9 KiB | 00m00s [ 30/137] Installing perl-IPC-Open3-0:1 100% | 0.0 B/s | 23.3 KiB | 00m00s [ 31/137] Installing perl-Term-ANSIColo 100% | 96.8 MiB/s | 99.1 KiB | 00m00s [ 32/137] Installing perl-Term-Cap-0:1. 100% | 0.0 B/s | 30.5 KiB | 00m00s [ 33/137] Installing perl-File-Temp-1:0 100% | 160.2 MiB/s | 164.0 KiB | 00m00s [ 34/137] Installing perl-HTTP-Tiny-0:0 100% | 150.6 MiB/s | 154.2 KiB | 00m00s [ 35/137] Installing perl-Pod-Simple-1: 100% | 278.0 MiB/s | 569.4 KiB | 00m00s [ 36/137] Installing perl-Socket-4:2.03 100% | 122.7 MiB/s | 125.6 KiB | 00m00s [ 37/137] Installing perl-SelectSaver-0 100% | 0.0 B/s | 2.6 KiB | 00m00s [ 38/137] Installing perl-Symbol-0:1.09 100% | 0.0 B/s | 7.2 KiB | 00m00s [ 39/137] Installing perl-File-stat-0:1 100% | 0.0 B/s | 13.2 KiB | 00m00s [ 40/137] Installing perl-Pod-Perldoc-0 100% | 164.7 MiB/s | 168.6 KiB | 00m00s [ 41/137] Installing perl-podlators-1:5 100% | 304.7 MiB/s | 312.1 KiB | 00m00s [ 42/137] Installing perl-Text-ParseWor 100% | 0.0 B/s | 14.5 KiB | 00m00s [ 43/137] Installing perl-base-0:2.27-5 100% | 0.0 B/s | 12.9 KiB | 00m00s [ 44/137] Installing perl-Fcntl-0:1.15- 100% | 0.0 B/s | 25.8 KiB | 00m00s [ 45/137] Installing perl-mro-0:1.28-50 100% | 41.7 MiB/s | 42.7 KiB | 00m00s [ 46/137] Installing perl-overloading-0 100% | 0.0 B/s | 5.5 KiB | 00m00s [ 47/137] Installing perl-IO-0:1.52-506 100% | 151.7 MiB/s | 155.3 KiB | 00m00s [ 48/137] Installing perl-Pod-Usage-4:2 100% | 84.2 MiB/s | 86.3 KiB | 00m00s [ 49/137] Installing perl-constant-0:1. 100% | 26.7 MiB/s | 27.4 KiB | 00m00s [ 50/137] Installing perl-Scalar-List-U 100% | 145.2 MiB/s | 148.7 KiB | 00m00s [ 51/137] Installing perl-overload-0:1. 100% | 0.0 B/s | 71.9 KiB | 00m00s [ 52/137] Installing perl-vars-0:1.05-5 100% | 0.0 B/s | 4.3 KiB | 00m00s [ 53/137] Installing perl-Errno-0:1.37- 100% | 0.0 B/s | 8.8 KiB | 00m00s [ 54/137] Installing perl-File-Basename 100% | 0.0 B/s | 14.6 KiB | 00m00s [ 55/137] Installing perl-Getopt-Std-0: 100% | 0.0 B/s | 11.6 KiB | 00m00s [ 56/137] Installing perl-MIME-Base64-0 100% | 47.2 MiB/s | 48.3 KiB | 00m00s [ 57/137] Installing perl-parent-1:0.24 100% | 0.0 B/s | 10.4 KiB | 00m00s [ 58/137] Installing perl-Storable-1:3. 100% | 228.5 MiB/s | 233.9 KiB | 00m00s [ 59/137] Installing perl-Getopt-Long-1 100% | 143.3 MiB/s | 146.7 KiB | 00m00s [ 60/137] Installing perl-Exporter-0:5. 100% | 54.2 MiB/s | 55.5 KiB | 00m00s [ 61/137] Installing perl-Carp-0:1.54-5 100% | 0.0 B/s | 47.7 KiB | 00m00s [ 62/137] Installing perl-DynaLoader-0: 100% | 0.0 B/s | 32.5 KiB | 00m00s [ 63/137] Installing perl-PathTools-0:3 100% | 89.9 MiB/s | 184.2 KiB | 00m00s [ 64/137] Installing perl-Encode-4:3.20 100% | 336.9 MiB/s | 4.7 MiB | 00m00s [ 65/137] Installing perl-libs-4:5.38.2 100% | 268.7 MiB/s | 9.9 MiB | 00m00s [ 66/137] Installing perl-interpreter-4 100% | 118.6 MiB/s | 121.4 KiB | 00m00s [ 67/137] Installing openblas-0:0.3.26- 100% | 95.5 MiB/s | 97.8 KiB | 00m00s [ 68/137] Installing openblas-openmp-0: 100% | 589.4 MiB/s | 38.9 MiB | 00m00s [ 69/137] Installing libquadmath-0:14.0 100% | 323.5 MiB/s | 331.2 KiB | 00m00s [ 70/137] Installing flexiblas-0:3.4.1- 100% | 46.8 MiB/s | 47.9 KiB | 00m00s [ 71/137] Installing flexiblas-openblas 100% | 39.2 MiB/s | 40.2 KiB | 00m00s [ 72/137] Installing flexiblas-netlib-0 100% | 408.1 MiB/s | 10.2 MiB | 00m00s [ 73/137] Installing protobuf-0:3.19.6- 100% | 406.7 MiB/s | 3.3 MiB | 00m00s [ 74/137] Installing re2-1:20220601-5.f 100% | 241.5 MiB/s | 494.6 KiB | 00m00s [ 75/137] Installing grpc-data-0:1.48.4 100% | 0.0 B/s | 30.4 KiB | 00m00s [ 76/137] Installing c-ares-0:1.25.0-3. 100% | 193.7 MiB/s | 396.7 KiB | 00m00s [ 77/137] Installing abseil-cpp-0:20240 100% | 225.7 MiB/s | 2.5 MiB | 00m00s [ 78/137] Installing python-pip-wheel-0 100% | 759.9 MiB/s | 1.5 MiB | 00m00s [ 79/137] Installing mpdecimal-0:2.5.1- 100% | 197.3 MiB/s | 202.0 KiB | 00m00s [ 80/137] Installing libb2-0:0.98.1-11. 100% | 0.0 B/s | 43.3 KiB | 00m00s [ 81/137] Installing expat-0:2.5.0-5.fc 100% | 131.3 MiB/s | 268.8 KiB | 00m00s [ 82/137] Installing python3-0:3.12.2-1 100% | 5.5 MiB/s | 33.6 KiB | 00m00s [ 83/137] Installing python3-libs-0:3.1 100% | 331.2 MiB/s | 41.4 MiB | 00m00s [ 84/137] Installing python3-protobuf-0 100% | 237.2 MiB/s | 1.9 MiB | 00m00s [ 85/137] Installing python3-googleapis 100% | 135.1 MiB/s | 830.1 KiB | 00m00s [ 86/137] Installing python3-jmespath-0 100% | 151.3 MiB/s | 155.0 KiB | 00m00s [ 87/137] Installing python3-packaging- 100% | 210.9 MiB/s | 431.9 KiB | 00m00s [ 88/137] Installing python3-markupsafe 100% | 59.0 MiB/s | 60.4 KiB | 00m00s [ 89/137] Installing python3-idna-0:3.6 100% | 248.4 MiB/s | 508.6 KiB | 00m00s [ 90/137] Installing python3-urllib3-0: 100% | 199.6 MiB/s | 1.0 MiB | 00m00s [ 91/137] Installing python3-six-0:1.16 100% | 117.2 MiB/s | 120.1 KiB | 00m00s [ 92/137] Installing python3-dateutil-1 100% | 108.8 MiB/s | 891.5 KiB | 00m00s [ 93/137] Installing python3-botocore-0 100% | 442.1 MiB/s | 89.7 MiB | 00m00s [ 94/137] Installing python3-grpcio-0:1 100% | 336.0 MiB/s | 7.4 MiB | 00m00s [ 95/137] Installing python3-pyasn1-0:0 100% | 220.8 MiB/s | 904.4 KiB | 00m00s [ 96/137] Installing python3-argparse-d 100% | 51.1 MiB/s | 52.3 KiB | 00m00s [ 97/137] Installing python3-throttler- 100% | 19.3 MiB/s | 39.6 KiB | 00m00s [ 98/137] Installing python3-pyasn1-mod 100% | 223.4 MiB/s | 1.8 MiB | 00m00s [ 99/137] Installing python3-grpcio-sta 100% | 17.5 MiB/s | 17.9 KiB | 00m00s [100/137] Installing python3-s3transfer 100% | 205.3 MiB/s | 630.7 KiB | 00m00s [101/137] Installing python3-boto3-0:1. 100% | 234.9 MiB/s | 1.9 MiB | 00m00s [102/137] Installing python3-jinja2-0:3 100% | 374.9 MiB/s | 3.0 MiB | 00m00s [103/137] Installing python3-werkzeug-0 100% | 263.8 MiB/s | 1.8 MiB | 00m00s [104/137] Installing python3-rpm-genera 100% | 81.0 MiB/s | 82.9 KiB | 00m00s [105/137] Installing python3-blinker-0: 100% | 110.4 MiB/s | 113.0 KiB | 00m00s [106/137] Installing python3-click-0:8. 100% | 266.9 MiB/s | 1.1 MiB | 00m00s [107/137] Installing python3-itsdangero 100% | 20.0 MiB/s | 102.4 KiB | 00m00s [108/137] Installing python3-numpy-1:1. 100% | 406.3 MiB/s | 44.3 MiB | 00m00s [109/137] Installing python3-pytz-0:202 100% | 112.9 MiB/s | 231.1 KiB | 00m00s [110/137] Installing python3-iniconfig- 100% | 22.9 MiB/s | 23.4 KiB | 00m00s [111/137] Installing python3-pluggy-0:1 100% | 183.9 MiB/s | 188.3 KiB | 00m00s [112/137] Installing python3-cachetools 100% | 142.5 MiB/s | 145.9 KiB | 00m00s [113/137] Installing python3-charset-no 100% | 157.5 MiB/s | 322.7 KiB | 00m00s [114/137] Installing python3-requests-0 100% | 115.8 MiB/s | 474.5 KiB | 00m00s [115/137] Installing python3-setuptools 100% | 270.4 MiB/s | 7.3 MiB | 00m00s [116/137] Installing python3-rsa-0:4.9- 100% | 123.1 MiB/s | 252.1 KiB | 00m00s [117/137] Installing python3-google-aut 100% | 181.1 MiB/s | 1.3 MiB | 00m00s [118/137] Installing python3-google-api 100% | 164.0 MiB/s | 839.8 KiB | 00m00s [119/137] Installing python3-google-clo 100% | 63.2 MiB/s | 194.3 KiB | 00m00s [120/137] Installing python3-configargp 100% | 236.9 MiB/s | 242.6 KiB | 00m00s [121/137] Installing python3-snakemake- 100% | 94.4 MiB/s | 96.7 KiB | 00m00s [122/137] Installing python3-snakemake- 100% | 73.5 MiB/s | 150.6 KiB | 00m00s [123/137] Installing python3-reretry-0: 100% | 34.6 MiB/s | 35.4 KiB | 00m00s [124/137] Installing python3-wrapt-0:1. 100% | 198.1 MiB/s | 202.8 KiB | 00m00s [125/137] Installing python3-snakemake- 100% | 55.5 MiB/s | 113.7 KiB | 00m00s [126/137] Installing google-crc32c-0:1. 100% | 24.9 MiB/s | 25.5 KiB | 00m00s [127/137] Installing python3-google-crc 100% | 66.3 MiB/s | 67.9 KiB | 00m00s [128/137] Installing python3-google-res 100% | 220.6 MiB/s | 677.6 KiB | 00m00s [129/137] Installing python3-google-clo 100% | 413.2 MiB/s | 1.2 MiB | 00m00s [130/137] Installing python3-snakemake- 100% | 37.8 MiB/s | 38.7 KiB | 00m00s [131/137] Installing python3-snakemake- 100% | 13.4 MiB/s | 41.2 KiB | 00m00s [132/137] Installing python3-pytest-0:7 100% | 370.7 MiB/s | 15.2 MiB | 00m00s [133/137] Installing python3-pandas-0:1 100% | 386.8 MiB/s | 39.5 MiB | 00m00s [134/137] Installing python3-flask-1:3. 100% | 217.3 MiB/s | 890.0 KiB | 00m00s [135/137] Installing python3-devel-0:3. 100% | 98.1 MiB/s | 1.3 MiB | 00m00s [136/137] Installing help2man-0:1.49.3- 100% | 103.9 MiB/s | 425.4 KiB | 00m00s [137/137] Installing vim-filesystem-2:9 100% | 41.8 KiB/s | 4.7 KiB | 00m00s >>> Running trigger-install scriptlet: glibc-common-0:2.39-2.fc40.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39-2.fc40.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 Warning: skipped PGP checks for 5 package(s). Finish: build setup for snakemake-8.4.8-1.fc40.src.rpm Start: rpmbuild snakemake-8.4.8-1.fc40.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707436800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.bMT0LS + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf snakemake-8.4.8 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-8.4.8.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd snakemake-8.4.8 + rm -rf /builddir/build/BUILD/snakemake-8.4.8-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.4.8-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP . recursedown('.') recursedown('./.github') recursedown('./.github/ISSUE_TEMPLATE') recursedown('./.github/workflows') recursedown('./.github/workflows/scripts') recursedown('./apidocs') recursedown('./apidocs/_templates') recursedown('./apidocs/api_reference') recursedown('./apidocs/api_reference/internal') recursedown('./docs') recursedown('./docs/_static') recursedown('./docs/executing') recursedown('./docs/getting_started') recursedown('./docs/getting_started/img') recursedown('./docs/project_info') recursedown('./docs/project_info/img') recursedown('./docs/snakefiles') recursedown('./docs/snakefiles/images') recursedown('./docs/tutorial') recursedown('./docs/tutorial/workflow') recursedown('./examples') recursedown('./examples/c') recursedown('./examples/c/include') recursedown('./examples/c/src') recursedown('./examples/cufflinks') recursedown('./examples/cufflinks/mapped') recursedown('./examples/flux') recursedown('./examples/hello-world') recursedown('./examples/hello-world/envs') recursedown('./examples/hello-world/scripts') recursedown('./examples/idea') recursedown('./examples/latex') recursedown('./examples/mirna') recursedown('./images') recursedown('./misc') recursedown('./misc/nano') recursedown('./misc/nano/syntax') recursedown('./misc/vim') recursedown('./misc/vim/ftdetect') recursedown('./misc/vim/ftplugin') recursedown('./misc/vim/ftplugin/snakemake') recursedown('./misc/vim/syntax') recursedown('./playground') recursedown('./playground/iteration') recursedown('./snakemake') recursedown('./snakemake/caching') recursedown('./snakemake/common') recursedown('./snakemake/common/tests') recursedown('./snakemake/common/tests/testcases') recursedown('./snakemake/common/tests/testcases/groups') recursedown('./snakemake/common/tests/testcases/simple') recursedown('./snakemake/deployment') recursedown('./snakemake/executors') recursedown('./snakemake/linting') recursedown('./snakemake/remote') recursedown('./snakemake/report') recursedown('./snakemake/report/data') recursedown('./snakemake/report/template') recursedown('./snakemake/report/template/components') recursedown('./snakemake/script') recursedown('./snakemake/template_rendering') recursedown('./snakemake/unit_tests') recursedown('./snakemake/unit_tests/templates') recursedown('./tests') recursedown('./tests/knapsack') recursedown('./tests/linting') recursedown('./tests/linting/absolute_paths') recursedown('./tests/linting/envvars') recursedown('./tests/linting/iofile_by_index') recursedown('./tests/linting/log_directive') recursedown('./tests/linting/long_run') recursedown('./tests/linting/missing_software_definition') recursedown('./tests/linting/mixed_func_and_rules') recursedown('./tests/linting/not_used_params') recursedown('./tests/linting/params_prefix') recursedown('./tests/linting/path_add') recursedown('./tests/linting/singularity') recursedown('./tests/linting/tab_usage') recursedown('./tests/profile') recursedown('./tests/resources') recursedown('./tests/resources/slurmcluster') recursedown("./tests/test (with parenthese's)") recursedown("./tests/test (with parenthese's)/expected-results") recursedown('./tests/test01') recursedown('./tests/test01/expected-results') recursedown('./tests/test01/expected-results/dir') recursedown('./tests/test02') recursedown('./tests/test02/expected-results') recursedown('./tests/test03') recursedown('./tests/test03/expected-results') recursedown('./tests/test04') recursedown('./tests/test04/expected-results') recursedown('./tests/test05') recursedown('./tests/test05/expected-results') recursedown('./tests/test06') recursedown('./tests/test06/expected-results') recursedown('./tests/test07') recursedown('./tests/test07/expected-results') recursedown('./tests/test08') recursedown('./tests/test08/expected-results') recursedown('./tests/test09') recursedown('./tests/test09/expected-results') recursedown('./tests/test10') recursedown('./tests/test10/expected-results') recursedown('./tests/test11') recursedown('./tests/test11/expected-results') recursedown('./tests/test12') recursedown('./tests/test12/expected-results') recursedown('./tests/test13') recursedown('./tests/test13/expected-results') recursedown('./tests/test15') recursedown('./tests/test15/expected-results') recursedown('./tests/testHighWorkload') recursedown('./tests/testHighWorkload/mfa') recursedown('./tests/test_all_temp') recursedown('./tests/test_all_temp/expected-results') recursedown('./tests/test_ancient') recursedown('./tests/test_ancient/expected-results') recursedown('./tests/test_ancient_dag') recursedown('./tests/test_ancient_dag/expected-results') recursedown('./tests/test_archive') recursedown('./tests/test_archive/expected-results') recursedown('./tests/test_azure_batch') recursedown('./tests/test_azure_batch/expected-results') recursedown('./tests/test_bash') recursedown('./tests/test_bash/expected-results') recursedown('./tests/test_batch') recursedown('./tests/test_batch/expected-results') recursedown('./tests/test_batch_final') recursedown('./tests/test_batch_final/expected-results') recursedown('./tests/test_benchmark') recursedown('./tests/test_benchmark/expected-results') recursedown('./tests/test_cache_multioutput') recursedown('./tests/test_cache_multioutput/expected-results') recursedown('./tests/test_checkpoint_allowed_rules') recursedown('./tests/test_checkpoint_allowed_rules/expected-results') recursedown('./tests/test_checkpoints') recursedown('./tests/test_checkpoints/expected-results') recursedown('./tests/test_checkpoints/expected-results/aggregated') recursedown('./tests/test_checkpoints/samples') recursedown('./tests/test_checkpoints_dir') recursedown('./tests/test_checkpoints_dir/expected-results') recursedown('./tests/test_checkpoints_dir/expected-results/aggregated') recursedown('./tests/test_checkpoints_dir/samples') recursedown('./tests/test_cloud_checkpoints_issue574') recursedown('./tests/test_cloud_checkpoints_issue574/expected-results') recursedown('./tests/test_cluster_cancelscript') recursedown('./tests/test_cluster_cancelscript/expected-results') recursedown('./tests/test_conda') recursedown('./tests/test_conda/expected-results') recursedown('./tests/test_conda_cmd_exe') recursedown('./tests/test_conda_cmd_exe/expected-results') recursedown('./tests/test_conda_custom_prefix') recursedown('./tests/test_conda_custom_prefix/expected-results') recursedown('./tests/test_conda_function') recursedown('./tests/test_conda_function/expected-results') recursedown('./tests/test_conda_global') recursedown('./tests/test_conda_global/expected-results') recursedown('./tests/test_conda_named') recursedown('./tests/test_conda_named/expected-results') recursedown('./tests/test_conda_pin_file') recursedown('./tests/test_conda_pin_file/expected-results') recursedown('./tests/test_conda_python_3_7_script') recursedown('./tests/test_conda_python_3_7_script/expected-results') recursedown('./tests/test_conda_python_script') recursedown('./tests/test_conda_python_script/expected-results') recursedown('./tests/test_conditional') recursedown('./tests/test_conditional/expected-results') recursedown('./tests/test_config') recursedown('./tests/test_config/expected-results') recursedown('./tests/test_config_merging') recursedown('./tests/test_config_merging/expected-results') recursedown('./tests/test_config_yte') recursedown('./tests/test_config_yte/expected-results') recursedown('./tests/test_container') recursedown('./tests/test_container/expected-results') recursedown('./tests/test_containerized') recursedown('./tests/test_containerized/expected-results') recursedown('./tests/test_convert_to_cwl') recursedown('./tests/test_converting_path_for_r_script') recursedown('./tests/test_converting_path_for_r_script/expected-results') recursedown('./tests/test_core_dependent_threads') recursedown('./tests/test_core_dependent_threads/expected-results') recursedown('./tests/test_cwl') recursedown('./tests/test_cwl/expected-results') recursedown('./tests/test_default_remote') recursedown('./tests/test_default_remote/expected-results') recursedown('./tests/test_default_resources') recursedown('./tests/test_default_resources/expected-results') recursedown('./tests/test_default_storage_local_job') recursedown('./tests/test_default_storage_local_job/expected-results') recursedown('./tests/test_default_target') recursedown('./tests/test_default_target/expected-results') recursedown('./tests/test_deferred_func_eval') recursedown('./tests/test_deferred_func_eval/expected-results') recursedown('./tests/test_delete_all_output') recursedown('./tests/test_delete_all_output/expected-results') recursedown('./tests/test_delete_output') recursedown('./tests/test_delete_output/expected-results') recursedown('./tests/test_delete_output/expected-results/foo') recursedown('./tests/test_deploy_hashing') recursedown('./tests/test_deploy_hashing/expected-results') recursedown('./tests/test_deploy_script') recursedown('./tests/test_deploy_script/expected-results') recursedown('./tests/test_deploy_sources') recursedown('./tests/test_deploy_sources/scripts') recursedown('./tests/test_directory') recursedown('./tests/test_directory/expected-results') recursedown('./tests/test_directory/expected-results/dir_to_link_to') recursedown('./tests/test_directory/expected-results/some') recursedown('./tests/test_directory/expected-results/some/shadow') recursedown('./tests/test_directory/expected-results/some_other_dir') recursedown('./tests/test_directory/input_dir') recursedown('./tests/test_dup_out_patterns') recursedown('./tests/test_dup_out_patterns/expected-results') recursedown('./tests/test_empty_include') recursedown('./tests/test_empty_include/expected-results') recursedown('./tests/test_ensure') recursedown('./tests/test_ensure/expected-results') recursedown('./tests/test_env_modules') recursedown('./tests/test_env_modules/expected-results') recursedown('./tests/test_envvars') recursedown('./tests/test_envvars/expected-results') recursedown('./tests/test_expand_flag') recursedown('./tests/test_expand_flag/expected-results') recursedown('./tests/test_filegraph') recursedown('./tests/test_filegraph/scripts') recursedown('./tests/test_filesep_windows') recursedown('./tests/test_filesep_windows/expected-results') recursedown('./tests/test_filesep_windows/expected-results/subfolder') recursedown('./tests/test_filesep_windows/subfolder') recursedown('./tests/test_format_params') recursedown('./tests/test_format_params/expected-results') recursedown('./tests/test_format_wildcards') recursedown('./tests/test_format_wildcards/expected-results') recursedown('./tests/test_fstring') recursedown('./tests/test_fstring/expected-results') recursedown('./tests/test_ftp_immediate_close') recursedown('./tests/test_ftp_immediate_close/expected-results') recursedown('./tests/test_generate_unit_tests') recursedown('./tests/test_generate_unit_tests/expected-results') recursedown('./tests/test_generate_unit_tests/expected-results/.tests') recursedown('./tests/test_generate_unit_tests/expected-results/.tests/unit') recursedown('./tests/test_generate_unit_tests/expected-results/.tests/unit/a') recursedown('./tests/test_generate_unit_tests/expected-results/.tests/unit/all') recursedown('./tests/test_generate_unit_tests/expected-results/.tests/unit/all/test') recursedown('./tests/test_generate_unit_tests/expected-results/.tests/unit/b') recursedown('./tests/test_generate_unit_tests/expected-results/.tests/unit/b/test') recursedown('./tests/test_generate_unit_tests/test') recursedown('./tests/test_get_log_both') recursedown('./tests/test_get_log_both/expected-results') recursedown('./tests/test_get_log_complex') recursedown('./tests/test_get_log_complex/expected-results') recursedown('./tests/test_get_log_none') recursedown('./tests/test_get_log_none/expected-results') recursedown('./tests/test_get_log_stderr') recursedown('./tests/test_get_log_stderr/expected-results') recursedown('./tests/test_get_log_stdout') recursedown('./tests/test_get_log_stdout/expected-results') recursedown('./tests/test_github_issue105') recursedown('./tests/test_github_issue105/expected-results') recursedown('./tests/test_github_issue1062') recursedown('./tests/test_github_issue1062/expected-results') recursedown('./tests/test_github_issue1069') recursedown('./tests/test_github_issue1069/expected-results') recursedown('./tests/test_github_issue1158') recursedown('./tests/test_github_issue1158/expected-results') recursedown('./tests/test_github_issue1261') recursedown('./tests/test_github_issue1261/expected-results') recursedown('./tests/test_github_issue1261/expected-results/out') recursedown('./tests/test_github_issue1384') recursedown('./tests/test_github_issue1384/expected-results') recursedown('./tests/test_github_issue1389') recursedown('./tests/test_github_issue1389/expected-results') recursedown('./tests/test_github_issue1396') recursedown('./tests/test_github_issue1396/expected-results') recursedown('./tests/test_github_issue1460') recursedown('./tests/test_github_issue1460/expected-results') recursedown('./tests/test_github_issue1469') recursedown('./tests/test_github_issue1498') recursedown('./tests/test_github_issue1498/expected-results') recursedown('./tests/test_github_issue1498/expected-results/results') recursedown('./tests/test_github_issue1498/expected-results/results/other') recursedown('./tests/test_github_issue1498/expected-results/results/other/results') recursedown('./tests/test_github_issue1500') recursedown('./tests/test_github_issue1500/config') recursedown('./tests/test_github_issue1500/expected-results') recursedown('./tests/test_github_issue1500/module-test') recursedown('./tests/test_github_issue1542') recursedown('./tests/test_github_issue1542/expected-results') recursedown('./tests/test_github_issue1550') recursedown('./tests/test_github_issue1550/expected-results') recursedown('./tests/test_github_issue1618') recursedown('./tests/test_github_issue1618/expected-results') recursedown('./tests/test_github_issue1818') recursedown('./tests/test_github_issue1818/.snakemake') recursedown('./tests/test_github_issue1818/.snakemake/metadata') recursedown('./tests/test_github_issue1818/expected-results') recursedown('./tests/test_github_issue1818/expected-results/my_directory') recursedown('./tests/test_github_issue1818/my_directory') recursedown('./tests/test_github_issue1882') recursedown('./tests/test_github_issue1882/expected-results') recursedown('./tests/test_github_issue2142') recursedown('./tests/test_github_issue2142/expected-results') recursedown('./tests/test_github_issue2154') recursedown('./tests/test_github_issue261') recursedown('./tests/test_github_issue261/expected-results') recursedown('./tests/test_github_issue261/expected-results/test1') recursedown('./tests/test_github_issue261/expected-results/test1/target1') recursedown('./tests/test_github_issue413') recursedown('./tests/test_github_issue413/expected-results') recursedown('./tests/test_github_issue413/expected-results/test_dir') recursedown('./tests/test_github_issue413/expected-results/test_dir/subdir') recursedown('./tests/test_github_issue413/test_dir') recursedown('./tests/test_github_issue413/test_dir/subdir') recursedown('./tests/test_github_issue456') recursedown('./tests/test_github_issue456/expected-results') recursedown('./tests/test_github_issue456/references') recursedown('./tests/test_github_issue456/references/gffs') recursedown('./tests/test_github_issue52') recursedown('./tests/test_github_issue52/expected-results') recursedown('./tests/test_github_issue627') recursedown('./tests/test_github_issue627/expected-results') recursedown('./tests/test_github_issue640') recursedown('./tests/test_github_issue640/expected-results') recursedown('./tests/test_github_issue727') recursedown('./tests/test_github_issue727/expected-results') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/1') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/10') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/11') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/12') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/13') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/14') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/15') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/16') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/17') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/18') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/19') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/2') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/3') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/4') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/5') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/6') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/7') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/8') recursedown('./tests/test_github_issue727/expected-results/checkpoint-test/bins/9') recursedown('./tests/test_github_issue78') recursedown('./tests/test_github_issue78/expected-results') recursedown('./tests/test_github_issue806') recursedown('./tests/test_github_issue806/expected-results') recursedown('./tests/test_github_issue806/expected-results/data') recursedown('./tests/test_github_issue806/expected-results/data/en') recursedown('./tests/test_github_issue806/expected-results/data/en/0') recursedown('./tests/test_github_issue806/expected-results/data/en/0/0') recursedown('./tests/test_github_issue806/expected-results/data/en/0/1') recursedown('./tests/test_github_issue806/expected-results/data/en/0/2') recursedown('./tests/test_github_issue806/expected-results/data/en/1') recursedown('./tests/test_github_issue806/expected-results/data/en/1/0') recursedown('./tests/test_github_issue806/expected-results/data/en/1/1') recursedown('./tests/test_github_issue806/expected-results/data/en/1/2') recursedown('./tests/test_github_issue806/expected-results/data/en/2') recursedown('./tests/test_github_issue806/expected-results/data/en/2/0') recursedown('./tests/test_github_issue806/expected-results/data/en/2/1') recursedown('./tests/test_github_issue806/expected-results/data/en/2/2') recursedown('./tests/test_github_issue806/expected-results/data/en/3') recursedown('./tests/test_github_issue806/expected-results/data/en/3/0') recursedown('./tests/test_github_issue806/expected-results/data/en/3/1') recursedown('./tests/test_github_issue806/expected-results/data/en/3/2') recursedown('./tests/test_github_issue806/expected-results/data/es') recursedown('./tests/test_github_issue806/expected-results/data/es/0') recursedown('./tests/test_github_issue806/expected-results/data/es/0/0') recursedown('./tests/test_github_issue806/expected-results/data/es/0/1') recursedown('./tests/test_github_issue806/expected-results/data/es/0/2') recursedown('./tests/test_github_issue806/expected-results/data/es/1') recursedown('./tests/test_github_issue806/expected-results/data/es/1/0') recursedown('./tests/test_github_issue806/expected-results/data/es/1/1') recursedown('./tests/test_github_issue806/expected-results/data/es/1/2') recursedown('./tests/test_github_issue806/expected-results/data/es/2') recursedown('./tests/test_github_issue806/expected-results/data/es/2/0') recursedown('./tests/test_github_issue806/expected-results/data/es/2/1') recursedown('./tests/test_github_issue806/expected-results/data/es/2/2') recursedown('./tests/test_github_issue806/expected-results/data/es/3') recursedown('./tests/test_github_issue806/expected-results/data/es/3/0') recursedown('./tests/test_github_issue806/expected-results/data/es/3/1') recursedown('./tests/test_github_issue806/expected-results/data/es/3/2') recursedown('./tests/test_github_issue806/expected-results/data/es_en') recursedown('./tests/test_github_issue929') recursedown('./tests/test_github_issue929/expected-results') recursedown('./tests/test_github_issue988') recursedown('./tests/test_github_issue988/expected-results') recursedown('./tests/test_github_issue988/expected-results/files') recursedown('./tests/test_github_issue_14') recursedown('./tests/test_github_issue_14/expected-results') recursedown('./tests/test_globwildcards') recursedown('./tests/test_globwildcards/expected-results') recursedown('./tests/test_google_lifesciences') recursedown('./tests/test_google_lifesciences/expected-results') recursedown('./tests/test_group_job_fail') recursedown('./tests/test_group_job_fail/expected-results') recursedown('./tests/test_group_jobs') recursedown('./tests/test_group_jobs/expected-results') recursedown('./tests/test_group_jobs_attempts') recursedown('./tests/test_group_jobs_attempts/expected-results') recursedown('./tests/test_group_jobs_resources') recursedown('./tests/test_group_jobs_resources/expected-results') recursedown('./tests/test_group_parallel') recursedown('./tests/test_group_parallel/expected-results') recursedown('./tests/test_group_with_pipe') recursedown('./tests/test_group_with_pipe/expected-results') recursedown('./tests/test_groupid_expand') recursedown('./tests/test_groupid_expand/expected-results') recursedown('./tests/test_groupid_expand_cluster') recursedown('./tests/test_groupid_expand_cluster/expected-results') recursedown('./tests/test_groups_out_of_jobs') recursedown('./tests/test_groups_out_of_jobs/expected-results') recursedown('./tests/test_gs_requester_pays') recursedown('./tests/test_gs_requester_pays/expected-results') recursedown('./tests/test_handover') recursedown('./tests/test_handover/expected-results') recursedown('./tests/test_immediate_submit') recursedown('./tests/test_immediate_submit/expected-results') recursedown('./tests/test_immediate_submit/expected-results/output') recursedown('./tests/test_immediate_submit/slurm') recursedown('./tests/test_incomplete_params') recursedown('./tests/test_incomplete_params/expected-results') recursedown('./tests/test_inferred_resources') recursedown('./tests/test_inferred_resources/expected-results') recursedown('./tests/test_inoutput_is_path') recursedown('./tests/test_inoutput_is_path/expected-results') recursedown('./tests/test_input_generator') recursedown('./tests/test_input_generator/expected-results') recursedown('./tests/test_ioutils') recursedown('./tests/test_ioutils/expected-results') recursedown('./tests/test_ioutils/expected-results/b') recursedown('./tests/test_ioutils/expected-results/c') recursedown('./tests/test_ioutils/expected-results/results') recursedown('./tests/test_issue1037') recursedown('./tests/test_issue1037/expected-results') recursedown('./tests/test_issue1041') recursedown('./tests/test_issue1041/expected-results') recursedown('./tests/test_issue1046') recursedown('./tests/test_issue1046/expected-results') recursedown('./tests/test_issue1046/my_wrapper') recursedown('./tests/test_issue1083') recursedown('./tests/test_issue1083/expected-results') recursedown('./tests/test_issue1085') recursedown('./tests/test_issue1085/expected-results') recursedown('./tests/test_issue1092') recursedown('./tests/test_issue1092/expected-results') recursedown('./tests/test_issue1093') recursedown('./tests/test_issue1093/expected-results') recursedown('./tests/test_issue1256') recursedown('./tests/test_issue1256/expected-results') recursedown('./tests/test_issue1281') recursedown('./tests/test_issue1281/expected-results') recursedown('./tests/test_issue1284') recursedown('./tests/test_issue1284/expected-results') recursedown('./tests/test_issue1331') recursedown('./tests/test_issue1331/expected-results') recursedown('./tests/test_issue1331/expected-results/aligned_and_sort') recursedown('./tests/test_issue2685') recursedown('./tests/test_issue2685/expected-results') recursedown('./tests/test_issue2685/expected-results/test') recursedown('./tests/test_issue381') recursedown('./tests/test_issue381/expected-results') recursedown('./tests/test_issue471') recursedown('./tests/test_issue471/expected-results') recursedown('./tests/test_issue584') recursedown('./tests/test_issue584/expected-results') recursedown('./tests/test_issue612') recursedown('./tests/test_issue612/expected-results') recursedown('./tests/test_issue635') recursedown('./tests/test_issue635/envs') recursedown('./tests/test_issue635/expected-results') recursedown('./tests/test_issue635/scripts') recursedown('./tests/test_issue805') recursedown('./tests/test_issue805/expected-results') recursedown('./tests/test_issue823_1') recursedown('./tests/test_issue823_1/expected-results') recursedown('./tests/test_issue823_2') recursedown('./tests/test_issue823_2/expected-results') recursedown('./tests/test_issue823_3') recursedown('./tests/test_issue823_3/expected-results') recursedown('./tests/test_issue850') recursedown('./tests/test_issue850/expected-results') recursedown('./tests/test_issue854') recursedown('./tests/test_issue854/expected-results') recursedown('./tests/test_issue860') recursedown('./tests/test_issue860/expected-results') recursedown('./tests/test_issue894') recursedown('./tests/test_issue894/expected-results') recursedown('./tests/test_issue912') recursedown('./tests/test_issue912/expected-results') recursedown('./tests/test_issue912/expected-results/fake') recursedown('./tests/test_issue912/expected-results/fake/logs') recursedown('./tests/test_issue912/expected-results/fake/test') recursedown('./tests/test_issue912/fake') recursedown('./tests/test_issue912/fake/test') recursedown('./tests/test_issue916') recursedown('./tests/test_issue916/expected-results') recursedown('./tests/test_issue930') recursedown('./tests/test_issue930/expected-results') recursedown('./tests/test_issue956') recursedown('./tests/test_issue956/expected-results') recursedown('./tests/test_issue958') recursedown('./tests/test_issue958/expected-results') recursedown('./tests/test_job_properties') recursedown('./tests/test_job_properties/expected-results') recursedown('./tests/test_jupyter_notebook') recursedown('./tests/test_jupyter_notebook/expected-results') recursedown('./tests/test_jupyter_notebook_draft') recursedown('./tests/test_jupyter_notebook_draft/expected-results') recursedown('./tests/test_jupyter_notebook_draft/expected-results/results') recursedown('./tests/test_keyword_list') recursedown('./tests/test_keyword_list/expected-results') recursedown('./tests/test_kubernetes') recursedown('./tests/test_kubernetes/envs') recursedown('./tests/test_kubernetes/expected-results') recursedown('./tests/test_lazy_resources') recursedown('./tests/test_lazy_resources/expected-results') recursedown('./tests/test_lazy_resources/expected-results/results') recursedown('./tests/test_list_untracked') recursedown('./tests/test_list_untracked/expected-results') recursedown('./tests/test_load_metawrapper') recursedown('./tests/test_load_metawrapper/data') recursedown('./tests/test_load_metawrapper/expected-results') recursedown('./tests/test_local_import') recursedown('./tests/test_local_import/expected-results') recursedown('./tests/test_local_import/foo') recursedown('./tests/test_localrule') recursedown('./tests/test_localrule/expected-results') recursedown('./tests/test_log_input') recursedown('./tests/test_log_input/expected-results') recursedown('./tests/test_long_shell') recursedown('./tests/test_long_shell/expected-results') recursedown('./tests/test_many_jobs') recursedown('./tests/test_match_by_wildcard_names') recursedown('./tests/test_match_by_wildcard_names/expected-results') recursedown('./tests/test_metadata_migration') recursedown('./tests/test_metadata_migration/.snakemake') recursedown('./tests/test_metadata_migration/.snakemake/log') recursedown('./tests/test_missing_file_dryrun') recursedown('./tests/test_missing_file_dryrun/expected-results') recursedown('./tests/test_module_complex') recursedown('./tests/test_module_complex/data') recursedown('./tests/test_module_complex/expected-results') recursedown('./tests/test_module_complex2') recursedown('./tests/test_module_complex2/data') recursedown('./tests/test_module_complex2/expected-results') recursedown('./tests/test_module_input_func') recursedown('./tests/test_module_input_func/expected-results') recursedown('./tests/test_module_input_func/expected-results/test') recursedown('./tests/test_module_input_func/expected-results/test/results') recursedown('./tests/test_module_input_func/module1') recursedown('./tests/test_module_local_git') recursedown('./tests/test_module_local_git/data') recursedown('./tests/test_module_local_git/expected-results') recursedown('./tests/test_module_nested') recursedown('./tests/test_module_nested/expected-results') recursedown('./tests/test_module_no_prefixing_modified_paths') recursedown('./tests/test_module_no_prefixing_modified_paths/expected-results') recursedown('./tests/test_module_no_prefixing_modified_paths/expected-results/module2') recursedown('./tests/test_module_no_prefixing_modified_paths/module1') recursedown('./tests/test_module_no_prefixing_modified_paths/module2') recursedown('./tests/test_module_report') recursedown('./tests/test_module_report/.snakemake') recursedown('./tests/test_module_report/.snakemake/metadata') recursedown('./tests/test_module_report/expected-results') recursedown('./tests/test_module_report/testdir') recursedown('./tests/test_module_wildcard_constraints') recursedown('./tests/test_module_wildcard_constraints/expected-results') recursedown('./tests/test_module_wildcard_constraints/expected-results/result') recursedown('./tests/test_module_wildcard_constraints/testmodule') recursedown('./tests/test_module_with_script') recursedown('./tests/test_module_with_script/expected-results') recursedown('./tests/test_module_workflow_snakefile_usage') recursedown('./tests/test_module_workflow_snakefile_usage/config') recursedown('./tests/test_module_workflow_snakefile_usage/expected-results') recursedown('./tests/test_module_workflow_snakefile_usage/expected-results/results') recursedown('./tests/test_module_workflow_snakefile_usage/expected-results/results/testmodule') recursedown('./tests/test_module_workflow_snakefile_usage/module-test') recursedown('./tests/test_modules_all') recursedown('./tests/test_modules_all/config') recursedown('./tests/test_modules_all/expected-results') recursedown('./tests/test_modules_all/expected-results/results') recursedown('./tests/test_modules_all/expected-results/results/testmodule') recursedown('./tests/test_modules_all/module-test') recursedown('./tests/test_modules_all_exclude') recursedown('./tests/test_modules_all_exclude/config') recursedown('./tests/test_modules_all_exclude/expected-results') recursedown('./tests/test_modules_all_exclude/expected-results/results') recursedown('./tests/test_modules_all_exclude/expected-results/results/testmodule') recursedown('./tests/test_modules_all_exclude/module-test') recursedown('./tests/test_modules_meta_wrapper') recursedown('./tests/test_modules_meta_wrapper/expected-results') recursedown('./tests/test_modules_peppy') recursedown('./tests/test_modules_peppy/config') recursedown('./tests/test_modules_peppy/expected-results') recursedown('./tests/test_modules_peppy/expected-results/foo') recursedown('./tests/test_modules_peppy/expected-results/foo/results') recursedown('./tests/test_modules_peppy/module-test') recursedown('./tests/test_modules_peppy/pep') recursedown('./tests/test_modules_prefix') recursedown('./tests/test_modules_prefix/config') recursedown('./tests/test_modules_prefix/expected-results') recursedown('./tests/test_modules_prefix/expected-results/foo') recursedown('./tests/test_modules_prefix/expected-results/foo/results') recursedown('./tests/test_modules_prefix/module-test') recursedown('./tests/test_modules_ruledeps_inheritance') recursedown('./tests/test_modules_ruledeps_inheritance/expected-results') recursedown('./tests/test_modules_ruledeps_inheritance/module') recursedown('./tests/test_modules_ruledeps_inheritance/module2') recursedown('./tests/test_modules_specific') recursedown('./tests/test_modules_specific/expected-results') recursedown('./tests/test_modules_specific/module-test') recursedown('./tests/test_multicomp_group_jobs') recursedown('./tests/test_multicomp_group_jobs/expected-results') recursedown('./tests/test_multiext') recursedown('./tests/test_multiext/expected-results') recursedown('./tests/test_multiext/expected-results/ref') recursedown('./tests/test_multiple_includes') recursedown('./tests/test_multiple_includes/expected-results') recursedown('./tests/test_name_override') recursedown('./tests/test_name_override/expected-results') recursedown('./tests/test_no_workflow_profile') recursedown('./tests/test_no_workflow_profile/dummy-general-profile') recursedown('./tests/test_no_workflow_profile/expected-results') recursedown('./tests/test_no_workflow_profile/workflow') recursedown('./tests/test_no_workflow_profile/workflow/profiles') recursedown('./tests/test_no_workflow_profile/workflow/profiles/default') recursedown('./tests/test_nonstr_params') recursedown('./tests/test_nonstr_params/expected-results') recursedown('./tests/test_omitfrom') recursedown('./tests/test_omitfrom/expected-results') recursedown('./tests/test_output_file_cache') recursedown('./tests/test_output_file_cache/cache') recursedown('./tests/test_output_file_cache/expected-results') recursedown('./tests/test_output_file_cache/expected-results/cache') recursedown('./tests/test_output_file_cache_storage') recursedown('./tests/test_output_file_cache_storage/expected-results') recursedown('./tests/test_params') recursedown('./tests/test_params/expected-results') recursedown('./tests/test_params/expected-results/somedir') recursedown('./tests/test_paramspace') recursedown('./tests/test_paramspace/expected-results') recursedown('./tests/test_paramspace/expected-results/results') recursedown('./tests/test_paramspace/expected-results/results/default') recursedown('./tests/test_paramspace/expected-results/results/default/plots') recursedown('./tests/test_paramspace/expected-results/results/default/plots/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/default/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace/expected-results/results/default/plots/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/default/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace/expected-results/results/default/simulations') recursedown('./tests/test_paramspace/expected-results/results/default/simulations/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/default/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace/expected-results/results/default/simulations/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/default/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace/expected-results/results/empty') recursedown('./tests/test_paramspace/expected-results/results/empty/plots') recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace/expected-results/results/filenamesep') recursedown('./tests/test_paramspace/expected-results/results/filenamesep/plots') recursedown('./tests/test_paramspace/expected-results/results/filenamesep/simulations') recursedown('./tests/test_paramspace/expected-results/results/full') recursedown('./tests/test_paramspace/expected-results/results/full/plots') recursedown('./tests/test_paramspace/expected-results/results/full/simulations') recursedown('./tests/test_paramspace/expected-results/results/full_reorder') recursedown('./tests/test_paramspace/expected-results/results/full_reorder/plots') recursedown('./tests/test_paramspace/expected-results/results/full_reorder/simulations') recursedown('./tests/test_paramspace/expected-results/results/one') recursedown('./tests/test_paramspace/expected-results/results/one/plots') recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace/expected-results/results/one/simulations') recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace/expected-results/results/sep') recursedown('./tests/test_paramspace/expected-results/results/sep/plots') recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_1') recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_2') recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_1') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_2') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern') recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern/plots') recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern/simulations') recursedown('./tests/test_paramspace/expected-results/results/two') recursedown('./tests/test_paramspace/expected-results/results/two/plots') recursedown('./tests/test_paramspace/expected-results/results/two/plots/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/two/plots/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/two/simulations') recursedown('./tests/test_paramspace/expected-results/results/two/simulations/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/two/simulations/alpha~2') recursedown('./tests/test_paramspace/scripts') recursedown('./tests/test_paramspace_single_wildcard') recursedown('./tests/test_paramspace_single_wildcard/expected-results') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/scripts') recursedown('./tests/test_parser') recursedown('./tests/test_parser/expected-results') recursedown('./tests/test_parsing_terminal_comment_following_statement') recursedown('./tests/test_parsing_terminal_comment_following_statement/expected-results') recursedown('./tests/test_pathlib') recursedown('./tests/test_pathlib/expected-results') recursedown('./tests/test_pathlib/expected-results/outdir') recursedown('./tests/test_pathlib/expected-results/outdir/function_unpacking') recursedown('./tests/test_pathlib_missing_file') recursedown('./tests/test_pathlib_missing_file/expected-results') recursedown('./tests/test_pep_pathlib') recursedown('./tests/test_pep_pathlib/expected-results') recursedown('./tests/test_pep_pathlib/pep') recursedown('./tests/test_pep_pathlib/workflow') recursedown('./tests/test_pep_pathlib/workflow/schemas') recursedown('./tests/test_peppy') recursedown('./tests/test_peppy/expected-results') recursedown('./tests/test_peppy/pep') recursedown('./tests/test_peppy/workflow') recursedown('./tests/test_peppy/workflow/schemas') recursedown('./tests/test_persistent_dict') recursedown('./tests/test_persistent_dict/expected-results') recursedown('./tests/test_pipe_depend') recursedown('./tests/test_pipe_depend/expected-results') recursedown('./tests/test_pipes') recursedown('./tests/test_pipes/expected-results') recursedown('./tests/test_pipes2') recursedown('./tests/test_pipes2/expected-results') recursedown('./tests/test_pipes_fail') recursedown('./tests/test_pipes_fail/expected-results') recursedown('./tests/test_pipes_multiple') recursedown('./tests/test_pipes_multiple/expected-results') recursedown('./tests/test_prebuilt_conda_script') recursedown('./tests/test_prebuilt_conda_script/dummy_package') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src/dummy') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src/dummy.egg-info') recursedown('./tests/test_prebuilt_conda_script/expected-results') recursedown('./tests/test_profile') recursedown('./tests/test_profile/expected-results') recursedown('./tests/test_protected_symlink_output') recursedown('./tests/test_protected_symlink_output/expected-results') recursedown('./tests/test_queue_input') recursedown('./tests/test_queue_input/expected-results') recursedown('./tests/test_r_wrapper') recursedown('./tests/test_remote_auto') recursedown('./tests/test_remote_auto/expected-results') recursedown('./tests/test_remote_azure') recursedown('./tests/test_remote_gs') recursedown('./tests/test_remote_gs/expected-results') recursedown('./tests/test_remote_irods') recursedown('./tests/test_remote_irods/expected-results') recursedown('./tests/test_remote_irods/setup-data') recursedown('./tests/test_remote_irods/test-data') recursedown('./tests/test_remote_log') recursedown('./tests/test_remote_log/expected-results') recursedown('./tests/test_remote_ncbi') recursedown('./tests/test_remote_ncbi/expected-results') recursedown('./tests/test_remote_ncbi_simple') recursedown('./tests/test_remote_ncbi_simple/expected-results') recursedown('./tests/test_remote_sftp') recursedown('./tests/test_remote_sftp/expected-results') recursedown('./tests/test_remote_zenodo') recursedown('./tests/test_remote_zenodo/expected-results') recursedown('./tests/test_report') recursedown('./tests/test_report/.snakemake') recursedown('./tests/test_report/.snakemake/metadata') recursedown('./tests/test_report/data') recursedown('./tests/test_report/envs') recursedown('./tests/test_report/expected-results') recursedown('./tests/test_report/report') recursedown('./tests/test_report/testdir') recursedown('./tests/test_report_dir') recursedown('./tests/test_report_dir/expected-results') recursedown('./tests/test_report_dir/test') recursedown('./tests/test_report_dir/test/js') recursedown('./tests/test_report_display_code') recursedown('./tests/test_report_display_code/expected-results') recursedown('./tests/test_report_zip') recursedown('./tests/test_report_zip/.snakemake') recursedown('./tests/test_report_zip/.snakemake/metadata') recursedown('./tests/test_report_zip/data') recursedown('./tests/test_report_zip/envs') recursedown('./tests/test_report_zip/expected-results') recursedown('./tests/test_report_zip/report') recursedown('./tests/test_report_zip/testdir') recursedown('./tests/test_resource_string_in_cli_or_profile') recursedown('./tests/test_resource_string_in_cli_or_profile/expected-results') recursedown('./tests/test_resource_string_in_cli_or_profile/profiles') recursedown('./tests/test_restartable_job_cmd_exit_1') recursedown('./tests/test_restartable_job_cmd_exit_1/expected-results') recursedown('./tests/test_restartable_job_qsub_exit_1') recursedown('./tests/test_restartable_job_qsub_exit_1/expected-results') recursedown('./tests/test_retries') recursedown('./tests/test_retries/expected-results') recursedown('./tests/test_retries_not_overriden') recursedown('./tests/test_retries_not_overriden/expected-results') recursedown('./tests/test_rule_defined_in_for_loop') recursedown('./tests/test_rule_defined_in_for_loop/expected-results') recursedown('./tests/test_rule_inheritance_globals') recursedown('./tests/test_rule_inheritance_globals/.snakemake') recursedown('./tests/test_rule_inheritance_globals/.snakemake/metadata') recursedown('./tests/test_rule_inheritance_globals/expected-results') recursedown('./tests/test_ruledag') recursedown('./tests/test_ruledeps') recursedown('./tests/test_ruledeps/expected-results') recursedown('./tests/test_run_namedlist') recursedown('./tests/test_run_namedlist/expected-results') recursedown('./tests/test_same_wildcard') recursedown('./tests/test_same_wildcard/expected-results') recursedown('./tests/test_scatter_gather') recursedown('./tests/test_scatter_gather/expected-results') recursedown('./tests/test_scatter_gather/expected-results/gathered') recursedown('./tests/test_scatter_gather/expected-results/splitted') recursedown('./tests/test_scatter_gather_multiple_processes') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/gathered') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_a') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_b') recursedown('./tests/test_script') recursedown('./tests/test_script/envs') recursedown('./tests/test_script/expected-results') recursedown('./tests/test_script/scripts') recursedown('./tests/test_script_pre_py39') recursedown('./tests/test_script_pre_py39/expected-results') recursedown('./tests/test_script_py') recursedown('./tests/test_script_py/expected-results') recursedown('./tests/test_script_py/scripts') recursedown('./tests/test_service_jobs') recursedown('./tests/test_service_jobs/expected-results') recursedown('./tests/test_set_resources') recursedown('./tests/test_set_resources/expected-results') recursedown('./tests/test_shadow') recursedown('./tests/test_shadow/expected-results') recursedown('./tests/test_shadow_copy') recursedown('./tests/test_shadow_copy/expected-results') recursedown('./tests/test_shadow_prefix') recursedown('./tests/test_shadow_prefix/expected-results') recursedown('./tests/test_shadowed_log') recursedown('./tests/test_shadowed_log/expected-results') recursedown('./tests/test_shell') recursedown('./tests/test_shell/expected-results') recursedown('./tests/test_singularity') recursedown('./tests/test_singularity/expected-results') recursedown('./tests/test_singularity_conda') recursedown('./tests/test_singularity_conda/expected-results') recursedown('./tests/test_singularity_global') recursedown('./tests/test_singularity_global/expected-results') recursedown('./tests/test_singularity_module') recursedown('./tests/test_singularity_module/expected-results') recursedown('./tests/test_singularity_none') recursedown('./tests/test_singularity_none/expected-results') recursedown('./tests/test_slurm_mpi') recursedown('./tests/test_slurm_mpi/envs') recursedown('./tests/test_slurm_mpi/expected-results') recursedown('./tests/test_solver') recursedown('./tests/test_solver/expected-results') recursedown('./tests/test_source_path') recursedown('./tests/test_source_path/expected-results') recursedown('./tests/test_source_path/workflow') recursedown('./tests/test_source_path/workflow/resources') recursedown('./tests/test_spaces_in_fnames') recursedown('./tests/test_spaces_in_fnames/expected-results') recursedown('./tests/test_speed') recursedown('./tests/test_storage') recursedown('./tests/test_storage/expected-results') recursedown('./tests/test_strict_mode') recursedown('./tests/test_strict_mode/expected-results') recursedown('./tests/test_string_resources') recursedown('./tests/test_string_resources/expected-results') recursedown('./tests/test_subworkflow_config') recursedown('./tests/test_subworkflow_config/expected-results') recursedown('./tests/test_subworkflows') recursedown('./tests/test_subworkflows/expected-results') recursedown('./tests/test_symlink_temp') recursedown('./tests/test_symlink_temp/expected-results') recursedown('./tests/test_symlink_time_handling') recursedown('./tests/test_symlink_time_handling/expected-results') recursedown('./tests/test_temp') recursedown('./tests/test_temp/expected-results') recursedown('./tests/test_temp_expand') recursedown('./tests/test_temp_expand/expected-results') recursedown('./tests/test_template_engine') recursedown('./tests/test_template_engine/expected-results') recursedown('./tests/test_tes') recursedown('./tests/test_tes/expected-results') recursedown('./tests/test_threads') recursedown('./tests/test_threads/expected-results') recursedown('./tests/test_threads0') recursedown('./tests/test_threads0/expected-results') recursedown('./tests/test_tibanna') recursedown('./tests/test_tibanna/expected-results') recursedown('./tests/test_tibanna/scripts') recursedown('./tests/test_tmpdir') recursedown('./tests/test_tmpdir/expected-results') recursedown('./tests/test_touch') recursedown('./tests/test_touch/expected-results') recursedown('./tests/test_touch_pipeline_with_temp_dir') recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results') recursedown('./tests/test_touch_remote_prefix') recursedown('./tests/test_touch_remote_prefix/expected-results') recursedown('./tests/test_touch_with_directories') recursedown('./tests/test_touch_with_directories/expected-results') recursedown('./tests/test_unpack_dict') recursedown('./tests/test_unpack_dict/expected-results') recursedown('./tests/test_unpack_list') recursedown('./tests/test_unpack_list/expected-results') recursedown('./tests/test_until') recursedown('./tests/test_until/expected-results') recursedown('./tests/test_update_config') recursedown('./tests/test_update_config/expected-results') recursedown('./tests/test_url_include') recursedown('./tests/test_url_include/expected-results') recursedown('./tests/test_use_rule_same_module') recursedown('./tests/test_use_rule_same_module/expected-results') recursedown('./tests/test_validate') recursedown('./tests/test_validate/expected-results') recursedown('./tests/test_wildcard_count_ambiguity') recursedown('./tests/test_wildcard_count_ambiguity/expected-results') ./setup.py: no change ./versioneer.py: no change ./.github/workflows/scripts/sacct-proxy.py: updating ./apidocs/conf.py: updating ./docs/conf.py: updating ./examples/hello-world/scripts/plot-hist.py: no change ./snakemake/__init__.py: no change ./snakemake/__main__.py: no change ./snakemake/_version.py: no change ./snakemake/api.py: no change ./snakemake/benchmark.py: no change ./snakemake/checkpoints.py: no change ./snakemake/cli.py: no change ./snakemake/cwl.py: no change ./snakemake/dag.py: no change ./snakemake/decorators.py: no change ./snakemake/exceptions.py: no change ./snakemake/gui.py: no change ./snakemake/io.py: no change ./snakemake/ioutils.py: no change ./snakemake/jobs.py: no change ./snakemake/logging.py: no change ./snakemake/modules.py: no change ./snakemake/notebook.py: no change ./snakemake/output_index.py: no change ./snakemake/parser.py: no change ./snakemake/path_modifier.py: no change ./snakemake/persistence.py: no change ./snakemake/profiles.py: no change ./snakemake/resources.py: no change ./snakemake/ruleinfo.py: no change ./snakemake/rules.py: no change ./snakemake/scheduler.py: no change ./snakemake/settings.py: no change ./snakemake/shell.py: no change ./snakemake/sourcecache.py: no change ./snakemake/spawn_jobs.py: no change ./snakemake/storage.py: no change ./snakemake/target_jobs.py: no change ./snakemake/utils.py: no change ./snakemake/workflow.py: no change ./snakemake/wrapper.py: no change ./snakemake/caching/__init__.py: no change ./snakemake/caching/hash.py: no change ./snakemake/caching/local.py: no change ./snakemake/caching/storage.py: no change ./snakemake/common/__init__.py: no change ./snakemake/common/argparse.py: no change ./snakemake/common/configfile.py: no change ./snakemake/common/git.py: no change ./snakemake/common/tbdstring.py: no change ./snakemake/common/workdir_handler.py: no change ./snakemake/common/tests/__init__.py: no change ./snakemake/common/tests/testcases/__init__.py: no change ./snakemake/common/tests/testcases/groups/__init__.py: no change ./snakemake/common/tests/testcases/simple/__init__.py: no change ./snakemake/deployment/__init__.py: no change ./snakemake/deployment/conda.py: no change ./snakemake/deployment/containerize.py: no change ./snakemake/deployment/env_modules.py: no change ./snakemake/deployment/singularity.py: no change ./snakemake/executors/__init__.py: no change ./snakemake/executors/dryrun.py: no change ./snakemake/executors/google_lifesciences_helper.py: updating ./snakemake/executors/local.py: no change ./snakemake/executors/touch.py: no change ./snakemake/linting/__init__.py: no change ./snakemake/linting/links.py: no change ./snakemake/linting/rules.py: no change ./snakemake/linting/snakefiles.py: no change ./snakemake/remote/AzBlob.py: no change ./snakemake/remote/EGA.py: no change ./snakemake/remote/FTP.py: no change ./snakemake/remote/GS.py: no change ./snakemake/remote/HTTP.py: no change ./snakemake/remote/NCBI.py: no change ./snakemake/remote/S3.py: no change ./snakemake/remote/S3Mocked.py: no change ./snakemake/remote/SFTP.py: no change ./snakemake/remote/XRootD.py: no change ./snakemake/remote/__init__.py: no change ./snakemake/remote/dropbox.py: no change ./snakemake/remote/gfal.py: no change ./snakemake/remote/gridftp.py: no change ./snakemake/remote/iRODS.py: no change ./snakemake/remote/webdav.py: no change ./snakemake/remote/zenodo.py: no change ./snakemake/report/__init__.py: no change ./snakemake/report/rulegraph_spec.py: no change ./snakemake/report/data/__init__.py: no change ./snakemake/report/data/categories.py: no change ./snakemake/report/data/common.py: no change ./snakemake/report/data/packages.py: no change ./snakemake/report/data/results.py: no change ./snakemake/report/data/rulegraph.py: no change ./snakemake/report/data/rules.py: no change ./snakemake/report/data/runtimes.py: no change ./snakemake/report/data/timeline.py: no change ./snakemake/report/template/__init__.py: no change ./snakemake/report/template/components/__init__.py: no change ./snakemake/script/__init__.py: no change ./snakemake/template_rendering/__init__.py: no change ./snakemake/template_rendering/jinja2.py: no change ./snakemake/template_rendering/yte.py: no change ./snakemake/unit_tests/__init__.py: no change ./snakemake/unit_tests/templates/__init__.py: no change ./tests/__init__.py: no change ./tests/common.py: no change ./tests/conftest.py: no change ./tests/test_api.py: no change ./tests/test_args.py: no change ./tests/test_executor_test_suite.py: no change ./tests/test_expand.py: no change ./tests/test_io.py: no change ./tests/test_linting.py: no change ./tests/test_persistence.py: no change ./tests/test_schema.py: no change ./tests/test_script.py: no change ./tests/testapi.py: no change ./tests/tests.py: no change ./tests/test_benchmark/script.py: updating ./tests/test_conda_python_3_7_script/test_script.py: no change ./tests/test_conda_python_script/test_script.py: no change ./tests/test_deploy_sources/scripts/test.py: no change ./tests/test_filegraph/scripts/vis.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_a.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_all.py: no change ./tests/test_generate_unit_tests/expected-results/.tests/unit/test_b.py: no change ./tests/test_get_log_both/wrapper.py: no change ./tests/test_get_log_complex/wrapper.py: no change ./tests/test_get_log_none/wrapper.py: no change ./tests/test_get_log_stderr/wrapper.py: no change ./tests/test_get_log_stdout/wrapper.py: no change ./tests/test_github_issue1158/qsub.py: updating ./tests/test_github_issue627/job.py: updating ./tests/test_github_issue_14/local_script.py: no change ./tests/test_github_issue_14/pythonTest.py: updating ./tests/test_handover/script.py: no change ./tests/test_issue1046/my_wrapper/wrapper.py: no change ./tests/test_issue916/local_script.py: no change ./tests/test_issue916/pythonTest.py: updating ./tests/test_job_properties/qsub.py: updating ./tests/test_local_import/bar.py: no change ./tests/test_local_import/foo/__init__.py: no change ./tests/test_paramspace/scripts/simulate.py: no change ./tests/test_paramspace_single_wildcard/scripts/simulate.py: no change ./tests/test_pipes/producer.py: no change ./tests/test_prebuilt_conda_script/test.py: no change ./tests/test_prebuilt_conda_script/dummy_package/src/dummy/__init__.py: no change ./tests/test_prebuilt_conda_script/dummy_package/src/dummy/dummy.py: no change ./tests/test_report_display_code/test.py: no change ./tests/test_restartable_job_cmd_exit_1/qsub.py: updating ./tests/test_restartable_job_qsub_exit_1/qsub.py: updating ./tests/test_script/scripts/test.py: no change ./tests/test_script_pre_py39/script.py: no change ./tests/test_script_py/scripts/test.py: no change ./tests/test_singularity/script.py: no change ./tests/test_singularity_module/script.py: no change ./tests/test_string_resources/qsub.py: updating ./tests/test_tibanna/cleanup.py: no change ./tests/test_tibanna/scripts/step2.py: no change recursedown('./tests/test_wildcard_keyword') recursedown('./tests/test_wildcard_keyword/expected-results') recursedown('./tests/test_workflow_profile') recursedown('./tests/test_workflow_profile/dummy-general-profile') recursedown('./tests/test_workflow_profile/expected-results') recursedown('./tests/test_workflow_profile/workflow') recursedown('./tests/test_workflow_profile/workflow/profiles') recursedown('./tests/test_workflow_profile/workflow/profiles/default') recursedown('./tests/test_wrapper') recursedown('./tests/test_wrapper/expected-results') recursedown('./tests/test_xrootd') recursedown('./tests/test_yaml_config') recursedown('./tests/test_yaml_config/expected-results') + sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py + sed -r -i 's@"python"@"/usr/bin/python3"@g' tests/test_linting.py + sed -r -i 's@python -m@"/usr/bin/python3 -m@g' tests/tests.py + for editor in nano vim + cp -vp misc/nano/README.md README-nano.md 'misc/nano/README.md' -> 'README-nano.md' + for editor in nano vim + cp -vp misc/vim/README.md README-vim.md 'misc/vim/README.md' -> 'README-vim.md' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.aBE4cw + umask 022 + cd /builddir/build/BUILD + cd snakemake-8.4.8 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.4.8/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.0.3) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement not satisfied: wheel Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.4.8-1.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 355.5 KiB/s | 22.0 KiB | 00m00s Copr repository 100% | 109.1 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 7.0 MiB/s | 143.6 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: python3-pip noarch 23.3.2-1.fc40 fedora 14.2 MiB python3-wheel noarch 1:0.41.2-3.fc40 fedora 507.1 KiB Transaction Summary: Installing: 2 packages Package "help2man-1.49.3-5.fc40.noarch" is already installed. Package "pyproject-rpm-macros-1.12.0-1.fc40.noarch" is already installed. Package "python3-devel-3.12.2-1.fc40.x86_64" is already installed. Package "python3-boto3-1.34.39-1.fc40.noarch" is already installed. Package "python3-flask-1:3.0.2-1.fc40.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-4.fc40.noarch" is already installed. Package "python3-packaging-23.2-4.fc40.noarch" is already installed. Package "python3-pandas-1.5.3-7.fc39~bootstrap.x86_64" is already installed. Package "python3-pytest-7.4.3-3.fc40.noarch" is already installed. Package "python3-setuptools-69.0.3-2.fc40.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.7-3.fc40.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.8-3.fc40.noarch" is already installed. Package "vim-filesystem-2:9.1.083-1.fc40.noarch" is already installed. Total size of inbound packages is 3 MiB. Need to download 0 B. After this operation 15 MiB will be used (install 15 MiB, remove 0 B). [1/2] python3-pip-0:23.3.2-1.fc40.noarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [2/2] python3-wheel-1:0.41.2-3.fc40.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction [1/4] Verify package files 100% | 166.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 95.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.41.2 100% | 73.4 MiB/s | 526.1 KiB | 00m00s [4/4] Installing python3-pip-0:23.3.2-1 100% | 177.0 MiB/s | 14.5 MiB | 00m00s >>> Running trigger-install scriptlet: glibc-common-0:2.39-2.fc40.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39-2.fc40.x86_64 Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707436800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.pizwWG + umask 022 + cd /builddir/build/BUILD + cd snakemake-8.4.8 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.4.8/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.0.3) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.4.8/snakemake-8.4.8.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: appdirs Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: immutables Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: connection-pool >=0.0.3 Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: datrie Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: docutils Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: gitpython Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: humanfriendly Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.3) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: jsonschema Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: nbformat Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: psutil Handling pulp <2.9,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pulp <2.9,>=2.3.1 Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pyyaml Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.31.0) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: smart-open >=3.0 Handling snakemake-interface-executor-plugins <9.0,>=8.1.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <9.0,>=8.1.3 (installed: snakemake-interface-executor-plugins 8.2.0) Handling snakemake-interface-common <2.0,>=1.15.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.15.0 (installed: snakemake-interface-common 1.15.3) Handling snakemake-interface-storage-plugins <4.0,>=3.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.0.0 (installed: snakemake-interface-storage-plugins 3.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: stopit Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: tabulate Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: toposort >=1.10 Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: yte <2.0,>=1.5.1 Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: dpath <3.0.0,>=2.1.6 Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: conda-inject <2.0,>=1.3.1 Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: slack-sdk ; extra == 'messaging' Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pygments ; extra == 'reports' + cat /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.4.8.dist-info/ removed 'snakemake-8.4.8.dist-info/LICENSE.md' removed 'snakemake-8.4.8.dist-info/METADATA' removed 'snakemake-8.4.8.dist-info/entry_points.txt' removed 'snakemake-8.4.8.dist-info/top_level.txt' removed directory 'snakemake-8.4.8.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.4.8-1.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 158.6 KiB/s | 22.0 KiB | 00m00s Copr repository 100% | 101.8 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "help2man-1.49.3-5.fc40.noarch" is already installed. Package "pyproject-rpm-macros-1.12.0-1.fc40.noarch" is already installed. Package "python3-devel-3.12.2-1.fc40.x86_64" is already installed. Package "python3-boto3-1.34.39-1.fc40.noarch" is already installed. Package "python3-configargparse-1.7-3.fc40.noarch" is already installed. Package "python3-flask-1:3.0.2-1.fc40.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-4.fc40.noarch" is already installed. Package "python3-packaging-23.2-4.fc40.noarch" is already installed. Package "python3-pandas-1.5.3-7.fc39~bootstrap.x86_64" is already installed. Package "python3-pip-23.3.2-1.fc40.noarch" is already installed. Package "python3-pytest-7.4.3-3.fc40.noarch" is already installed. Package "python3-requests-2.31.0-3.fc40.noarch" is already installed. Package "python3-reretry-0.11.8-8.fc40.noarch" is already installed. Package "python3-setuptools-69.0.3-2.fc40.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.7-3.fc40.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.8-3.fc40.noarch" is already installed. Package "python3-throttler-1.2.2-9.fc40.noarch" is already installed. Package "python3-wheel-1:0.41.2-3.fc40.noarch" is already installed. Package "python3-wrapt-1.16.0-3.fc40.x86_64" is already installed. Package "vim-filesystem-2:9.1.083-1.fc40.noarch" is already installed. Package Arch Version Repository Size Installing: python3-GitPython noarch 3.1.40-4.fc40 fedora 1.7 MiB python3-appdirs noarch 1.4.4-13.fc40 fedora 69.0 KiB python3-conda-inject noarch 1.3.1-3.fc40 copr_base 23.0 KiB python3-connection_pool noarch 0.0.3-11.fc40 fedora 21.1 KiB python3-datrie x86_64 0.8.2-25.fc40 fedora 444.8 KiB python3-docutils noarch 0.20.1-3.fc40 fedora 4.8 MiB python3-dpath noarch 2.1.6-1.fc40 fedora 92.7 KiB python3-humanfriendly noarch 10.0-10.fc40 fedora 549.7 KiB python3-immutables x86_64 0.20-3.fc40 fedora 184.4 KiB python3-jsonschema noarch 4.19.1-3.fc40 fedora 851.4 KiB python3-nbformat noarch 5.9.2-3.fc40 copr_base 556.3 KiB python3-psutil x86_64 5.9.5-4.fc40 fedora 1.4 MiB python3-pulp noarch 2.7.0-5.fc40 fedora 889.5 KiB python3-pygments noarch 2.17.2-3.fc40 fedora 10.3 MiB python3-pyyaml x86_64 6.0.1-14.fc40 fedora 786.4 KiB python3-slackclient noarch 3.26.2-3.fc40 fedora 2.8 MiB python3-smart_open noarch 6.4.0-4.fc40 fedora 459.0 KiB python3-stopit noarch 1.1.2-10.fc40 fedora 65.1 KiB python3-tabulate noarch 0.9.0-6.fc40 fedora 343.7 KiB python3-toposort noarch 1.10-10.fc40 fedora 28.5 KiB python3-yte noarch 1.5.4-3.fc40 copr_base 60.5 KiB Installing dependencies: git-core x86_64 2.43.0-3.fc40 fedora 20.7 MiB less x86_64 643-4.fc40 fedora 368.6 KiB libcbor x86_64 0.11.0-1.fc40 fedora 73.9 KiB libedit x86_64 3.1-50.20230828cvs.fc40 fedora 243.9 KiB libfido2 x86_64 1.14.0-4.fc40 fedora 237.8 KiB libyaml x86_64 0.2.5-14.fc40 fedora 130.4 KiB openssh x86_64 9.6p1-1.fc40.2 fedora 1.8 MiB openssh-clients x86_64 9.6p1-1.fc40.2 fedora 2.6 MiB python3-attrs noarch 23.2.0-4.fc40 fedora 379.5 KiB python3-boto noarch 2.49.0-21.fc40 fedora 9.8 MiB python3-fastjsonschema noarch 2.19.1-1.fc40 copr_base 189.2 KiB python3-gitdb noarch 4.0.10-5.fc40 fedora 503.2 KiB python3-jsonschema-specifications noarch 2023.11.2-3.fc40 fedora 45.8 KiB python3-jupyter-core noarch 5.1.0-7.fc40 fedora 505.8 KiB python3-plac noarch 1.4.2-5.fc40 fedora 226.6 KiB python3-platformdirs noarch 3.11.0-3.fc40 fedora 162.4 KiB python3-referencing noarch 0.31.1-3.fc40 fedora 313.3 KiB python3-rpds-py x86_64 0.17.1-1.fc40 fedora 708.1 KiB python3-smmap noarch 5.0.0-8.fc40 fedora 198.2 KiB python3-traitlets noarch 5.11.2-3.fc40 fedora 929.3 KiB python3-zombie-imp noarch 0.0.2-5.fc40 fedora 58.0 KiB Transaction Summary: Installing: 42 packages Total size of inbound packages is 15 MiB. Need to download 7 MiB. After this operation 66 MiB will be used (install 66 MiB, remove 0 B). [ 1/42] python3-appdirs-0:1.4.4-13.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 2/42] python3-GitPython-0:3.1.40-4.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 3/42] python3-jsonschema-0:4.19.1-3.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 4/42] git-core-0:2.43.0-3.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/42] python3-gitdb-0:4.0.10-5.fc40.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/42] python3-attrs-0:23.2.0-4.fc40.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 7/42] python3-jsonschema-specificatio 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/42] python3-referencing-0:0.31.1-3. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 9/42] python3-rpds-py-0:0.17.1-1.fc40 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [10/42] python3-jupyter-core-0:5.1.0-7. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [11/42] python3-traitlets-0:5.11.2-3.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [12/42] less-0:643-4.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [13/42] openssh-clients-0:9.6p1-1.fc40. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [14/42] python3-smmap-0:5.0.0-8.fc40.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [15/42] python3-platformdirs-0:3.11.0-3 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [16/42] libedit-0:3.1-50.20230828cvs.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [17/42] libfido2-0:1.14.0-4.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [18/42] openssh-0:9.6p1-1.fc40.2.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [19/42] libcbor-0:0.11.0-1.fc40.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [20/42] python3-fastjsonschema-0:2.19.1 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [21/42] python3-connection_pool-0:0.0.3 100% | 103.8 KiB/s | 16.7 KiB | 00m00s >>> Downloading successful, but checksum doesn't match. Calculated: 09bc7756ab9b [22/42] python3-dpath-0:2.1.6-1.fc40.no 100% | 219.4 KiB/s | 41.7 KiB | 00m00s >>> Downloading successful, but checksum doesn't match. Calculated: 70fc99b4acf5 [23/42] python3-datrie-0:0.8.2-25.fc40. 100% | 1.0 MiB/s | 158.5 KiB | 00m00s [24/42] python3-pulp-0:2.7.0-5.fc40.noa 100% | 657.7 KiB/s | 210.5 KiB | 00m00s >>> Downloading successful, but checksum doesn't match. Calculated: c6486b391699 [25/42] python3-immutables-0:0.20-3.fc4 100% | 1.2 MiB/s | 64.2 KiB | 00m00s [26/42] python3-humanfriendly-0:10.0-10 100% | 2.0 MiB/s | 141.8 KiB | 00m00s [27/42] python3-docutils-0:0.20.1-3.fc4 100% | 4.8 MiB/s | 1.0 MiB | 00m00s [28/42] python3-pyyaml-0:6.0.1-14.fc40. 100% | 5.5 MiB/s | 232.8 KiB | 00m00s [29/42] python3-psutil-0:5.9.5-4.fc40.x 100% | 3.0 MiB/s | 266.3 KiB | 00m00s [30/42] python3-slackclient-0:3.26.2-3. 100% | 11.0 MiB/s | 553.8 KiB | 00m00s [31/42] python3-smart_open-0:6.4.0-4.fc 100% | 2.5 MiB/s | 118.1 KiB | 00m00s [32/42] python3-stopit-0:1.1.2-10.fc40. 100% | 815.2 KiB/s | 29.3 KiB | 00m00s [33/42] python3-tabulate-0:0.9.0-6.fc40 100% | 1.6 MiB/s | 69.9 KiB | 00m00s [34/42] python3-conda-inject-0:1.3.1-3. 100% | 3.7 MiB/s | 18.7 KiB | 00m00s [35/42] python3-pygments-0:2.17.2-3.fc4 100% | 13.2 MiB/s | 2.5 MiB | 00m00s [36/42] python3-nbformat-0:5.9.2-3.fc40 100% | 59.3 MiB/s | 121.3 KiB | 00m00s [37/42] python3-toposort-0:1.10-10.fc40 100% | 558.3 KiB/s | 20.1 KiB | 00m00s [38/42] libyaml-0:0.2.5-14.fc40.x86_64 100% | 1.6 MiB/s | 59.2 KiB | 00m00s [39/42] python3-plac-0:1.4.2-5.fc40.noa 100% | 1.8 MiB/s | 65.7 KiB | 00m00s [40/42] python3-boto-0:2.49.0-21.fc40.n 100% | 22.4 MiB/s | 1.8 MiB | 00m00s [41/42] python3-yte-0:1.5.4-3.fc40.noar 100% | 260.4 KiB/s | 31.5 KiB | 00m00s [42/42] python3-zombie-imp-0:0.0.2-5.fc 100% | 808.5 KiB/s | 29.1 KiB | 00m00s -------------------------------------------------------------------------------- [42/42] Total 100% | 9.7 MiB/s | 7.5 MiB | 00m01s Running transaction [ 1/44] Verify package files 100% | 636.0 B/s | 42.0 B | 00m00s [ 2/44] Prepare transaction 100% | 823.0 B/s | 42.0 B | 00m00s [ 3/44] Installing python3-traitlets-0: 100% | 231.1 MiB/s | 946.4 KiB | 00m00s [ 4/44] Installing python3-rpds-py-0:0. 100% | 231.8 MiB/s | 712.1 KiB | 00m00s [ 5/44] Installing python3-attrs-0:23.2 100% | 128.3 MiB/s | 394.0 KiB | 00m00s [ 6/44] Installing python3-referencing- 100% | 157.7 MiB/s | 322.9 KiB | 00m00s [ 7/44] Installing python3-jsonschema-s 100% | 26.9 MiB/s | 55.1 KiB | 00m00s [ 8/44] Installing python3-jsonschema-0 100% | 212.8 MiB/s | 871.7 KiB | 00m00s [ 9/44] Installing python3-fastjsonsche 100% | 96.3 MiB/s | 197.2 KiB | 00m00s [10/44] Installing python3-zombie-imp-0 100% | 15.1 MiB/s | 62.0 KiB | 00m00s [11/44] Installing python3-boto-0:2.49. 100% | 234.3 MiB/s | 10.1 MiB | 00m00s [12/44] Installing libcbor-0:0.11.0-1.f 100% | 73.5 MiB/s | 75.3 KiB | 00m00s [13/44] Installing libfido2-0:1.14.0-4. 100% | 233.7 MiB/s | 239.3 KiB | 00m00s [14/44] Installing openssh-0:9.6p1-1.fc 100% | 364.0 MiB/s | 1.8 MiB | 00m00s [15/44] Installing libedit-0:3.1-50.202 100% | 239.8 MiB/s | 245.5 KiB | 00m00s [16/44] Installing openssh-clients-0:9. 100% | 237.1 MiB/s | 2.6 MiB | 00m00s >>> Running post-install scriptlet: openssh-clients-0:9.6p1-1.fc40.2.x86_64 >>> Stop post-install scriptlet: openssh-clients-0:9.6p1-1.fc40.2.x86_64 [17/44] Installing python3-platformdirs 100% | 82.6 MiB/s | 169.2 KiB | 00m00s [18/44] Installing python3-jupyter-core 100% | 129.2 MiB/s | 529.3 KiB | 00m00s [19/44] Installing python3-smmap-0:5.0. 100% | 100.5 MiB/s | 205.9 KiB | 00m00s [20/44] Installing python3-gitdb-0:4.0. 100% | 169.2 MiB/s | 519.7 KiB | 00m00s [21/44] Installing less-0:643-4.fc40.x8 100% | 181.6 MiB/s | 372.0 KiB | 00m00s [22/44] Installing git-core-0:2.43.0-3. 100% | 431.1 MiB/s | 20.7 MiB | 00m00s [23/44] Installing python3-plac-0:1.4.2 100% | 224.7 MiB/s | 230.1 KiB | 00m00s [24/44] Installing libyaml-0:0.2.5-14.f 100% | 128.7 MiB/s | 131.8 KiB | 00m00s [25/44] Installing python3-pyyaml-0:6.0 100% | 195.4 MiB/s | 800.2 KiB | 00m00s [26/44] Installing python3-dpath-0:2.1. 100% | 96.1 MiB/s | 98.4 KiB | 00m00s [27/44] Installing python3-yte-0:1.5.4- 100% | 64.3 MiB/s | 65.8 KiB | 00m00s [28/44] Installing python3-conda-inject 100% | 25.1 MiB/s | 25.7 KiB | 00m00s [29/44] Installing python3-GitPython-0: 100% | 289.0 MiB/s | 1.7 MiB | 00m00s [30/44] Installing python3-nbformat-0:5 100% | 142.7 MiB/s | 584.5 KiB | 00m00s [31/44] Installing python3-smart_open-0 100% | 153.4 MiB/s | 471.3 KiB | 00m00s [32/44] Installing python3-toposort-0:1 100% | 30.1 MiB/s | 30.8 KiB | 00m00s [33/44] Installing python3-tabulate-0:0 100% | 339.0 MiB/s | 347.1 KiB | 00m00s [34/44] Installing python3-stopit-0:1.1 100% | 33.9 MiB/s | 69.4 KiB | 00m00s [35/44] Installing python3-slackclient- 100% | 155.2 MiB/s | 2.9 MiB | 00m00s [36/44] Installing python3-pygments-0:2 100% | 292.8 MiB/s | 10.5 MiB | 00m00s [37/44] Installing python3-psutil-0:5.9 100% | 357.7 MiB/s | 1.4 MiB | 00m00s [38/44] Installing python3-immutables-0 100% | 92.9 MiB/s | 190.4 KiB | 00m00s [39/44] Installing python3-humanfriendl 100% | 137.0 MiB/s | 561.2 KiB | 00m00s [40/44] Installing python3-docutils-0:0 100% | 257.2 MiB/s | 4.9 MiB | 00m00s [41/44] Installing python3-datrie-0:0.8 100% | 218.2 MiB/s | 446.9 KiB | 00m00s [42/44] Installing python3-connection_p 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [43/44] Installing python3-appdirs-0:1. 100% | 69.5 MiB/s | 71.1 KiB | 00m00s [44/44] Installing python3-pulp-0:2.7.0 100% | 24.6 MiB/s | 906.6 KiB | 00m00s >>> Running trigger-install scriptlet: glibc-common-0:2.39-2.fc40.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39-2.fc40.x86_64 Warning: skipped PGP checks for 4 package(s). Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707436800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.yH5Cnn + umask 022 + cd /builddir/build/BUILD + cd snakemake-8.4.8 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.4.8/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.0.3) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.4.8/snakemake-8.4.8.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.20) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.3) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.2) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.5) Handling pulp <2.9,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.9,>=2.3.1 (installed: pulp 2.7.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.31.0) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open >=3.0 (installed: smart-open 6.4.0) Handling snakemake-interface-executor-plugins <9.0,>=8.1.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <9.0,>=8.1.3 (installed: snakemake-interface-executor-plugins 8.2.0) Handling snakemake-interface-common <2.0,>=1.15.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.15.0 (installed: snakemake-interface-common 1.15.3) Handling snakemake-interface-storage-plugins <4.0,>=3.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.0.0 (installed: snakemake-interface-storage-plugins 3.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort >=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.1.6) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.1) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.26.2) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.4.8.dist-info/ removed 'snakemake-8.4.8.dist-info/LICENSE.md' removed 'snakemake-8.4.8.dist-info/METADATA' removed 'snakemake-8.4.8.dist-info/top_level.txt' removed 'snakemake-8.4.8.dist-info/entry_points.txt' removed directory 'snakemake-8.4.8.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.4.8-1.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 361.3 KiB/s | 22.0 KiB | 00m00s Copr repository 100% | 117.5 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "help2man-1.49.3-5.fc40.noarch" is already installed. Package "pyproject-rpm-macros-1.12.0-1.fc40.noarch" is already installed. Package "python3-devel-3.12.2-1.fc40.x86_64" is already installed. Package "python3-appdirs-1.4.4-13.fc40.noarch" is already installed. Package "python3-boto3-1.34.39-1.fc40.noarch" is already installed. Package "python3-configargparse-1.7-3.fc40.noarch" is already installed. Package "python3-connection_pool-0.0.3-11.fc40.noarch" is already installed. Package "python3-datrie-0.8.2-25.fc40.x86_64" is already installed. Package "python3-docutils-0.20.1-3.fc40.noarch" is already installed. Package "python3-flask-1:3.0.2-1.fc40.noarch" is already installed. Package "python3-GitPython-3.1.40-4.fc40.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-4.fc40.noarch" is already installed. Package "python3-humanfriendly-10.0-10.fc40.noarch" is already installed. Package "python3-immutables-0.20-3.fc40.x86_64" is already installed. Package "python3-jsonschema-4.19.1-3.fc40.noarch" is already installed. Package "python3-nbformat-5.9.2-3.fc40.noarch" is already installed. Package "python3-packaging-23.2-4.fc40.noarch" is already installed. Package "python3-pandas-1.5.3-7.fc39~bootstrap.x86_64" is already installed. Package "python3-pip-23.3.2-1.fc40.noarch" is already installed. Package "python3-psutil-5.9.5-4.fc40.x86_64" is already installed. Package "python3-pygments-2.17.2-3.fc40.noarch" is already installed. Package "python3-pytest-7.4.3-3.fc40.noarch" is already installed. Package "python3-pyyaml-6.0.1-14.fc40.x86_64" is already installed. Package "python3-requests-2.31.0-3.fc40.noarch" is already installed. Package "python3-reretry-0.11.8-8.fc40.noarch" is already installed. Package "python3-setuptools-69.0.3-2.fc40.noarch" is already installed. Package "python3-slackclient-3.26.2-3.fc40.noarch" is already installed. Package "python3-smart_open-6.4.0-4.fc40.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.7-3.fc40.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.8-3.fc40.noarch" is already installed. Package "python3-stopit-1.1.2-10.fc40.noarch" is already installed. Package "python3-tabulate-0.9.0-6.fc40.noarch" is already installed. Package "python3-throttler-1.2.2-9.fc40.noarch" is already installed. Package "python3-toposort-1.10-10.fc40.noarch" is already installed. Package "python3-wheel-1:0.41.2-3.fc40.noarch" is already installed. Package "python3-wrapt-1.16.0-3.fc40.x86_64" is already installed. Package "vim-filesystem-2:9.1.083-1.fc40.noarch" is already installed. Nothing to do. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707436800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.va1DPQ + umask 022 + cd /builddir/build/BUILD + cd snakemake-8.4.8 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.4.8/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.0.3) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.4.8/snakemake-8.4.8.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.20) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.3) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.2) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.5) Handling pulp <2.9,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.9,>=2.3.1 (installed: pulp 2.7.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.31.0) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open >=3.0 (installed: smart-open 6.4.0) Handling snakemake-interface-executor-plugins <9.0,>=8.1.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <9.0,>=8.1.3 (installed: snakemake-interface-executor-plugins 8.2.0) Handling snakemake-interface-common <2.0,>=1.15.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.15.0 (installed: snakemake-interface-common 1.15.3) Handling snakemake-interface-storage-plugins <4.0,>=3.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.0.0 (installed: snakemake-interface-storage-plugins 3.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort >=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.1.6) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.1) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.26.2) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-buildrequires + rm -rfv snakemake-8.4.8.dist-info/ removed 'snakemake-8.4.8.dist-info/LICENSE.md' removed 'snakemake-8.4.8.dist-info/METADATA' removed 'snakemake-8.4.8.dist-info/entry_points.txt' removed 'snakemake-8.4.8.dist-info/top_level.txt' removed directory 'snakemake-8.4.8.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.uxBdF3 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.4.8 + mkdir -p /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-8.4.8/pyproject-wheeldir Processing /builddir/build/BUILD/snakemake-8.4.8 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info writing /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file '/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-modern-metadata-sdqx8cz2/snakemake-8.4.8.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: snakemake Building wheel for snakemake (pyproject.toml): started Running command Building wheel for snakemake (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/storage.py -> build/lib/snakemake copying snakemake/spawn_jobs.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/settings.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/profiles.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/ioutils.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/cli.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/api.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/script copying snakemake/script/__init__.py -> build/lib/snakemake/script creating build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report creating build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote creating build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting creating build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors copying snakemake/executors/touch.py -> build/lib/snakemake/executors copying snakemake/executors/local.py -> build/lib/snakemake/executors copying snakemake/executors/dryrun.py -> build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors creating build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment creating build/lib/snakemake/common copying snakemake/common/workdir_handler.py -> build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/git.py -> build/lib/snakemake/common copying snakemake/common/configfile.py -> build/lib/snakemake/common copying snakemake/common/argparse.py -> build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common creating build/lib/snakemake/caching copying snakemake/caching/storage.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates creating build/lib/snakemake/report/template copying snakemake/report/template/__init__.py -> build/lib/snakemake/report/template creating build/lib/snakemake/report/data copying snakemake/report/data/timeline.py -> build/lib/snakemake/report/data copying snakemake/report/data/runtimes.py -> build/lib/snakemake/report/data copying snakemake/report/data/rules.py -> build/lib/snakemake/report/data copying snakemake/report/data/rulegraph.py -> build/lib/snakemake/report/data copying snakemake/report/data/results.py -> build/lib/snakemake/report/data copying snakemake/report/data/packages.py -> build/lib/snakemake/report/data copying snakemake/report/data/common.py -> build/lib/snakemake/report/data copying snakemake/report/data/categories.py -> build/lib/snakemake/report/data copying snakemake/report/data/__init__.py -> build/lib/snakemake/report/data creating build/lib/snakemake/report/template/components copying snakemake/report/template/components/__init__.py -> build/lib/snakemake/report/template/components creating build/lib/snakemake/common/tests copying snakemake/common/tests/__init__.py -> build/lib/snakemake/common/tests creating build/lib/snakemake/common/tests/testcases copying snakemake/common/tests/testcases/__init__.py -> build/lib/snakemake/common/tests/testcases creating build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/simple/__init__.py -> build/lib/snakemake/common/tests/testcases/simple creating build/lib/snakemake/common/tests/testcases/groups copying snakemake/common/tests/testcases/groups/__init__.py -> build/lib/snakemake/common/tests/testcases/groups copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/report/template/style.css -> build/lib/snakemake/report/template copying snakemake/report/template/index.html.jinja2 -> build/lib/snakemake/report/template copying snakemake/report/template/logo.svg -> build/lib/snakemake/report/template copying snakemake/report/template/components/subcategory.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/stats.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/search_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_graph.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_view_button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/report_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/navbar.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/menu.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_item.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_heading.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/icon.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/content.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/common.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/category.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/breadcrumbs.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/app.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_menu.js -> build/lib/snakemake/report/template/components copying snakemake/common/tests/testcases/simple/Snakefile -> build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/groups/Snakefile -> build/lib/snakemake/common/tests/testcases/groups UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '8.4.8' installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/_version.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/gui.html -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/report.css -> build/bdist.linux-x86_64/wheel/snakemake creating build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/storage.py -> build/bdist.linux-x86_64/wheel/snakemake/caching creating build/bdist.linux-x86_64/wheel/snakemake/common creating build/bdist.linux-x86_64/wheel/snakemake/common/tests creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/Snakefile -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/Snakefile -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases copying build/lib/snakemake/common/tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/argparse.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/configfile.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/git.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/workdir_handler.py -> build/bdist.linux-x86_64/wheel/snakemake/common creating build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment creating build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/dryrun.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/local.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/touch.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-x86_64/wheel/snakemake/executors creating build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-x86_64/wheel/snakemake/linting creating build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-x86_64/wheel/snakemake/remote creating build/bdist.linux-x86_64/wheel/snakemake/report creating build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/categories.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/packages.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/results.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rulegraph.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/runtimes.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/timeline.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data creating build/bdist.linux-x86_64/wheel/snakemake/report/template copying build/lib/snakemake/report/template/logo.svg -> build/bdist.linux-x86_64/wheel/snakemake/report/template copying build/lib/snakemake/report/template/index.html.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/report/template copying build/lib/snakemake/report/template/style.css -> build/bdist.linux-x86_64/wheel/snakemake/report/template creating build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/app.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/breadcrumbs.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/category.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/common.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/content.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/icon.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_heading.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_item.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/navbar.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/report_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_view_button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_graph.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/search_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/stats.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/subcategory.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/template copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-x86_64/wheel/snakemake/report creating build/bdist.linux-x86_64/wheel/snakemake/script copying build/lib/snakemake/script/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/script creating build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests copying build/lib/snakemake/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/__main__.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/api.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/cli.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/exceptions.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/io.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ioutils.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/profiles.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/settings.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/spawn_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/storage.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/wrapper.py -> build/bdist.linux-x86_64/wheel/snakemake running install_egg_info running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to build/bdist.linux-x86_64/wheel/snakemake-8.4.8-py3.12.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/snakemake-8.4.8.dist-info/WHEEL creating '/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir/pip-wheel-dniv9ucp/.tmp-t4ztxhio/snakemake-8.4.8-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/api.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cli.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.html' adding 'snakemake/gui.py' adding 'snakemake/io.py' adding 'snakemake/ioutils.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/profiles.py' adding 'snakemake/report.css' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/settings.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/spawn_jobs.py' adding 'snakemake/storage.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/storage.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/argparse.py' adding 'snakemake/common/configfile.py' adding 'snakemake/common/git.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/common/workdir_handler.py' adding 'snakemake/common/tests/__init__.py' adding 'snakemake/common/tests/testcases/__init__.py' adding 'snakemake/common/tests/testcases/groups/Snakefile' adding 'snakemake/common/tests/testcases/groups/__init__.py' adding 'snakemake/common/tests/testcases/simple/Snakefile' adding 'snakemake/common/tests/testcases/simple/__init__.py' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/dryrun.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/jobscript.sh' adding 'snakemake/executors/local.py' adding 'snakemake/executors/touch.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/data/__init__.py' adding 'snakemake/report/data/categories.py' adding 'snakemake/report/data/common.py' adding 'snakemake/report/data/packages.py' adding 'snakemake/report/data/results.py' adding 'snakemake/report/data/rulegraph.py' adding 'snakemake/report/data/rules.py' adding 'snakemake/report/data/runtimes.py' adding 'snakemake/report/data/timeline.py' adding 'snakemake/report/template/__init__.py' adding 'snakemake/report/template/index.html.jinja2' adding 'snakemake/report/template/logo.svg' adding 'snakemake/report/template/style.css' adding 'snakemake/report/template/components/__init__.py' adding 'snakemake/report/template/components/abstract_menu.js' adding 'snakemake/report/template/components/abstract_results.js' adding 'snakemake/report/template/components/app.js' adding 'snakemake/report/template/components/breadcrumbs.js' adding 'snakemake/report/template/components/button.js' adding 'snakemake/report/template/components/category.js' adding 'snakemake/report/template/components/common.js' adding 'snakemake/report/template/components/content.js' adding 'snakemake/report/template/components/icon.js' adding 'snakemake/report/template/components/list_heading.js' adding 'snakemake/report/template/components/list_item.js' adding 'snakemake/report/template/components/menu.js' adding 'snakemake/report/template/components/navbar.js' adding 'snakemake/report/template/components/report_info.js' adding 'snakemake/report/template/components/result_info.js' adding 'snakemake/report/template/components/result_view_button.js' adding 'snakemake/report/template/components/rule_graph.js' adding 'snakemake/report/template/components/rule_info.js' adding 'snakemake/report/template/components/search_results.js' adding 'snakemake/report/template/components/stats.js' adding 'snakemake/report/template/components/subcategory.js' adding 'snakemake/script/__init__.py' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-8.4.8.dist-info/LICENSE.md' adding 'snakemake-8.4.8.dist-info/METADATA' adding 'snakemake-8.4.8.dist-info/WHEEL' adding 'snakemake-8.4.8.dist-info/entry_points.txt' adding 'snakemake-8.4.8.dist-info/top_level.txt' adding 'snakemake-8.4.8.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for snakemake (pyproject.toml): finished with status 'done' Created wheel for snakemake: filename=snakemake-8.4.8-py3-none-any.whl size=291860 sha256=2d634d4627d3eb41f49dca7df7faee33d116ecd8a73b0250be326ca4ef0d33f9 Stored in directory: /builddir/.cache/pip/wheels/3d/95/14/51d9a614525264a844f9f23de55cfde86a96a2d3512454f0a6 Successfully built snakemake + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.G9Tzxr + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 ++ dirname /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.4.8 ++ ls /builddir/build/BUILD/snakemake-8.4.8/pyproject-wheeldir/snakemake-8.4.8-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=snakemake==8.4.8 + '[' -z snakemake==8.4.8 ']' + TMPDIR=/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-8.4.8/pyproject-wheeldir snakemake==8.4.8 Using pip 23.3.2 from /usr/lib/python3.12/site-packages/pip (python 3.12) Looking in links: /builddir/build/BUILD/snakemake-8.4.8/pyproject-wheeldir Processing ./pyproject-wheeldir/snakemake-8.4.8-py3-none-any.whl Installing collected packages: snakemake Creating /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin changing mode of /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin/snakemake to 755 Successfully installed snakemake-8.4.8 + '[' -d /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin/snakemake /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin/snakemake: updating + rm -rfv /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages ']' + site_dirs+=("/usr/lib/python3.12/site-packages") + '[' /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib64/python3.12/site-packages '!=' /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages ']' + '[' -d /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib64/python3.12/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.12/site-packages/snakemake-8.4.8.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages/snakemake-8.4.8.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 --record /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages/snakemake-8.4.8.dist-info/RECORD --output /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages/snakemake-8.4.8.dist-info/RECORD removed '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages/snakemake-8.4.8.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages/snakemake-8.4.8.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages/snakemake-8.4.8.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_PERCENTAGES_COUNT=2 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-files --output-modules /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 --sitelib /usr/lib/python3.12/site-packages --sitearch /usr/lib64/python3.12/site-packages --python-version 3.12 --pyproject-record /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-record --prefix /usr -l snakemake + install -d /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/man/man1 + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages + help2man --no-info '--name=Metapackage for snakemake: messaging extras' snakemake + install -t /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc + install -d /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles + cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles 'misc/vim/README.md' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/README.md' 'misc/vim/ftdetect' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/ftdetect' 'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/ftdetect/snakemake.vim' 'misc/vim/ftplugin' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/ftplugin' 'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/ftplugin/snakemake' 'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim' 'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim' 'misc/vim/syntax' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/syntax' 'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/syntax/snakemake.vim' + find /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/vim/vimfiles/README.md + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 8.4.8-1.fc40 --unique-debug-suffix -8.4.8-1.fc40.x86_64 --unique-debug-src-base snakemake-8.4.8-1.fc40.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/snakemake-8.4.8 find-debuginfo: starting Extracting debug info from 0 files Creating .debug symlinks for symlinks to ELF files find: ‘debug’: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.9DXgd1 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.4.8 + '[' '!' -f /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages + _PYTHONSITE=/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/snakemake-8.4.8-1.fc40.x86_64-pyproject-modules -e '*.tests*' -e snakemake.executors.flux Check import: snakemake Check import: snakemake.api Check import: snakemake.benchmark Check import: snakemake.caching Check import: snakemake.caching.hash Check import: snakemake.caching.local Check import: snakemake.caching.storage Check import: snakemake.checkpoints Check import: snakemake.cli Check import: snakemake.common Check import: snakemake.common.argparse Check import: snakemake.common.configfile Check import: snakemake.common.git Check import: snakemake.common.tbdstring Check import: snakemake.common.workdir_handler Check import: snakemake.cwl Check import: snakemake.dag Check import: snakemake.decorators Check import: snakemake.deployment Check import: snakemake.deployment.conda Check import: snakemake.deployment.containerize Check import: snakemake.deployment.env_modules Check import: snakemake.deployment.singularity Check import: snakemake.exceptions Check import: snakemake.executors Check import: snakemake.executors.dryrun Check import: snakemake.executors.google_lifesciences_helper Check import: snakemake.executors.local Check import: snakemake.executors.touch Check import: snakemake.gui Check import: snakemake.io Check import: snakemake.ioutils Check import: snakemake.jobs Check import: snakemake.linting Check import: snakemake.linting.links Check import: snakemake.linting.rules Check import: snakemake.linting.snakefiles Check import: snakemake.logging Check import: snakemake.modules Check import: snakemake.notebook Check import: snakemake.output_index Check import: snakemake.parser Check import: snakemake.path_modifier Check import: snakemake.persistence Check import: snakemake.profiles Check import: snakemake.remote Check import: snakemake.remote.AzBlob Check import: snakemake.remote.EGA Check import: snakemake.remote.FTP Check import: snakemake.remote.GS Check import: snakemake.remote.HTTP Check import: snakemake.remote.NCBI Check import: snakemake.remote.S3 Check import: snakemake.remote.S3Mocked Check import: snakemake.remote.SFTP Check import: snakemake.remote.XRootD Check import: snakemake.remote.dropbox Check import: snakemake.remote.gfal Check import: snakemake.remote.gridftp Check import: snakemake.remote.iRODS Check import: snakemake.remote.webdav Check import: snakemake.remote.zenodo Check import: snakemake.report Check import: snakemake.report.data Check import: snakemake.report.data.categories Check import: snakemake.report.data.common Check import: snakemake.report.data.packages Check import: snakemake.report.data.results Check import: snakemake.report.data.rulegraph Check import: snakemake.report.data.rules Check import: snakemake.report.data.runtimes Check import: snakemake.report.data.timeline Check import: snakemake.report.rulegraph_spec Check import: snakemake.report.template Check import: snakemake.report.template.components Check import: snakemake.resources Check import: snakemake.ruleinfo Check import: snakemake.rules Check import: snakemake.scheduler Check import: snakemake.script Check import: snakemake.settings Check import: snakemake.shell Check import: snakemake.sourcecache Check import: snakemake.spawn_jobs Check import: snakemake.storage Check import: snakemake.target_jobs Check import: snakemake.template_rendering Check import: snakemake.template_rendering.jinja2 Check import: snakemake.template_rendering.yte Check import: snakemake.unit_tests Check import: snakemake.unit_tests.templates Check import: snakemake.utils Check import: snakemake.workflow Check import: snakemake.wrapper + ignore=' --ignore-glob=tests/test_google_lifesciences/*' + k='not test_deploy_sources' + ignore=' --ignore-glob=tests/test_google_lifesciences/* --ignore-glob=tests/test_conda_python_3_7_script/*' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-8.4.8/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest -v -k 'not test_deploy_sources' '--ignore-glob=tests/test_google_lifesciences/*' '--ignore-glob=tests/test_conda_python_3_7_script/*' ============================= test session starts ============================== platform linux -- Python 3.12.2, pytest-7.4.3, pluggy-1.3.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/snakemake-8.4.8 collecting ... collected 53 items / 1 deselected / 52 selected tests/test_args.py::test_parse_batch PASSED [ 1%] tests/test_executor_test_suite.py::TestWorkflows::test_simple_workflow PASSED [ 3%] tests/test_executor_test_suite.py::TestWorkflows::test_group_workflow PASSED [ 5%] tests/test_expand.py::test_simple_expand PASSED [ 7%] tests/test_expand.py::test_allow_missing PASSED [ 9%] tests/test_io.py::test_wildcard_regex PASSED [ 11%] tests/test_io.py::test_expand PASSED [ 13%] tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 15%] tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 17%] tests/test_linting.py::test_lint[singularity-positive] PASSED [ 19%] tests/test_linting.py::test_lint[singularity-negative] PASSED [ 21%] tests/test_linting.py::test_lint[path_add-positive] PASSED [ 23%] tests/test_linting.py::test_lint[path_add-negative] PASSED [ 25%] tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 26%] tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 28%] tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 30%] tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 32%] tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 34%] tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 36%] tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 38%] tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 40%] tests/test_linting.py::test_lint[long_run-positive] PASSED [ 42%] tests/test_linting.py::test_lint[long_run-negative] PASSED [ 44%] tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 46%] tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 48%] tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 50%] tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 51%] tests/test_linting.py::test_lint[envvars-positive] PASSED [ 53%] tests/test_linting.py::test_lint[envvars-negative] PASSED [ 55%] tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 57%] tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 59%] tests/test_persistence.py::TestCleanupContainers::test_one_unrequired_container_gets_removed PASSED [ 61%] tests/test_schema.py::test_config PASSED [ 63%] tests/test_schema.py::test_config_ref PASSED [ 65%] tests/test_schema.py::test_dataframe PASSED [ 67%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_shebang_and_second_manifest PASSED [ 69%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_with_shebang PASSED [ 71%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_without_shebang PASSED [ 73%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_empty_line_without_shebang PASSED [ 75%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_is_case_insensitive PASSED [ 76%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spacing_has_no_impact PASSED [ 78%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_formatting_not_touched_even_if_wrong PASSED [ 80%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spelt_wrong PASSED [ 82%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_shebang PASSED [ 84%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_without_shebang PASSED [ 86%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_spacing_around_language PASSED [ 88%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_has_non_cargo_block PASSED [ 90%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_missing_closing_fence PASSED [ 92%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_not_in_first_comment_block PASSED [ 94%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_outer_line_doc_comment PASSED [ 96%] tests/test_script.py::TestBashEncoder::test_named_list_one_named_one_str PASSED [ 98%] tests/test_script.py::TestBashEncoder::test_named_list_named_is_list PASSED [100%] =============================== warnings summary =============================== tests/test_executor_test_suite.py::TestWorkflows::test_simple_workflow :488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/test_executor_test_suite.py::TestWorkflows::test_simple_workflow :488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/test_executor_test_suite.py::TestWorkflows::test_simple_workflow /usr/lib64/python3.12/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). _EPOCH_DATETIME = datetime.utcfromtimestamp(0) tests/test_schema.py: 12 warnings /builddir/build/BUILD/snakemake-8.4.8/snakemake/utils.py:52: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need. from jsonschema import validators, RefResolver tests/test_schema.py::test_dataframe /usr/lib64/python3.12/site-packages/pandas/core/algorithms.py:522: DeprecationWarning: np.find_common_type is deprecated. Please use `np.result_type` or `np.promote_types`. See https://numpy.org/devdocs/release/1.25.0-notes.html and the docs for more information. (Deprecated NumPy 1.25) common = np.find_common_type([values.dtype, comps_array.dtype], []) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========== 52 passed, 1 deselected, 16 warnings in 79.60s (0:01:19) =========== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: snakemake-8.4.8-1.fc40.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.SS6e2N + umask 022 + cd /builddir/build/BUILD + cd snakemake-8.4.8 + DOCDIR=/builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/doc/snakemake + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.4.8/CHANGELOG.md /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.4.8/README.md /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.4.8/README-nano.md /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.4.8/README-vim.md /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64/usr/share/doc/snakemake + RPM_EC=0 ++ jobs -p + exit 0 Provides: python3.12dist(snakemake) = 8.4.8 python3dist(snakemake) = 8.4.8 snakemake = 8.4.8-1.fc40 vim-snakemake = 8.4.8-1.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.12dist(conda-inject) < 2~~ with python3.12dist(conda-inject) >= 1.3.1) (python3.12dist(dpath) < 3~~ with python3.12dist(dpath) >= 2.1.6) (python3.12dist(jinja2) < 4~~ with python3.12dist(jinja2) >= 3) (python3.12dist(pulp) < 2.9~~ with python3.12dist(pulp) >= 2.3.1) (python3.12dist(snakemake-interface-common) < 2~~ with python3.12dist(snakemake-interface-common) >= 1.15) (python3.12dist(snakemake-interface-executor-plugins) < 9~~ with python3.12dist(snakemake-interface-executor-plugins) >= 8.1.3) (python3.12dist(snakemake-interface-storage-plugins) < 4~~ with python3.12dist(snakemake-interface-storage-plugins) >= 3) (python3.12dist(yte) < 2~~ with python3.12dist(yte) >= 1.5.1) /usr/bin/python3 python(abi) = 3.12 python3.12dist(appdirs) python3.12dist(configargparse) python3.12dist(connection-pool) >= 0.0.3 python3.12dist(datrie) python3.12dist(docutils) python3.12dist(gitpython) python3.12dist(humanfriendly) python3.12dist(immutables) python3.12dist(jsonschema) python3.12dist(nbformat) python3.12dist(packaging) python3.12dist(psutil) python3.12dist(pyyaml) python3.12dist(requests) python3.12dist(reretry) python3.12dist(smart-open) >= 3 python3.12dist(stopit) python3.12dist(tabulate) python3.12dist(throttler) python3.12dist(toposort) >= 1.10 python3.12dist(wrapt) Obsoletes: snakemake+azure < 8.1.0-1 snakemake+google-cloud < 8.1.0-1 snakemake-doc < 8.2.1-2 Processing files: snakemake+reports-8.4.8-1.fc40.noarch Provides: python3.12dist(snakemake[reports]) = 8.4.8 python3dist(snakemake[reports]) = 8.4.8 snakemake+reports = 8.4.8-1.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(pygments) Processing files: snakemake+messaging-8.4.8-1.fc40.noarch Provides: python3.12dist(snakemake[messaging]) = 8.4.8 python3dist(snakemake[messaging]) = 8.4.8 snakemake+messaging = 8.4.8-1.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(slack-sdk) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 Wrote: /builddir/build/SRPMS/snakemake-8.4.8-1.fc40.src.rpm Wrote: /builddir/build/RPMS/snakemake+reports-8.4.8-1.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+messaging-8.4.8-1.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake-8.4.8-1.fc40.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.73cjOv + umask 022 + cd /builddir/build/BUILD + cd snakemake-8.4.8 + /usr/bin/rm -rf /builddir/build/BUILDROOT/snakemake-8.4.8-1.fc40.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.M2VGYf + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/snakemake-8.4.8-SPECPARTS + rm -rf snakemake-8.4.8 snakemake-8.4.8.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild snakemake-8.4.8-1.fc40.src.rpm Finish: build phase for snakemake-8.4.8-1.fc40.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1707906836.488850/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-8.4.8-1.fc40.src.rpm) Config(child) 1 minutes 39 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "snakemake", "epoch": null, "version": "8.4.8", "release": "1.fc40", "arch": "src" }, { "name": "snakemake", "epoch": null, "version": "8.4.8", "release": "1.fc40", "arch": "noarch" }, { "name": "snakemake+messaging", "epoch": null, "version": "8.4.8", "release": "1.fc40", "arch": "noarch" }, { "name": "snakemake+reports", "epoch": null, "version": "8.4.8", "release": "1.fc40", "arch": "noarch" } ] } RPMResults finished