Mock Version: 3.5
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/petpvc.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1674286422.767225/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f096c9b13d0>timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2osx5kvd:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2osx5kvd:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '36b3e748f7834af6b8eaf5f87ba0249e', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1674286422.767225/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2osx5kvd:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/petpvc.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1674172800
Wrote: /builddir/build/SRPMS/petpvc-1.2.10-5.fc38.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/petpvc.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1674286422.767225/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f096c9b13d0>timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2osx5kvd:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2osx5kvd:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'c2864dfb614847d4bc1757b4bd0801e8', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1674286422.767225/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2osx5kvd:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/petpvc.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1674172800
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.l75roh
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf PETPVC-1.2.10
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/petpvc-1.2.10.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd PETPVC-1.2.10
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ sed -i -e /parc/d CMakeLists.txt
+ sed -i 's/\r$//' parc/FS.csv parc/GIF_v3.csv
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.UnTP2g
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd PETPVC-1.2.10
+ flags=(-std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs)
+ export ITK_DIR=/usr/lib64/cmake/InsightToolkit
+ ITK_DIR=/usr/lib64/cmake/InsightToolkit
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON '-DCMAKE_CXX_FLAGS:STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs'
CMake Deprecation Warning at CMakeLists.txt:20 (cmake_minimum_required):
Compatibility with CMake < 2.8.12 will be removed from a future version of
CMake.
Update the VERSION argument <min> value or use a ...<max> suffix to tell
CMake that the project does not need compatibility with older versions.
-- The C compiler identification is GNU 13.0.1
-- The CXX compiler identification is GNU 13.0.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Python3: /usr/bin/python3.11 (found suitable version "3.11.1", minimum required is "3.11") found components: Interpreter Development.Module Development.Embed
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Found GLEW: /usr/lib64/libGLEW.so
-- Found OpenGL: /usr/lib64/libOpenGL.so found components: OpenGL GLX
-- Found HDF5: /usr/lib64/libhdf5.so (found version "1.12.1") found components: C HL
-- Found utf8cpp: /usr/include/utf8cpp
-- Found OGG: /usr/lib64/libogg.so
-- Found THEORA: /usr/lib64/libtheora.so
-- Found NetCDF: netcdf (found version "4.9.0")
-- Found LibPROJ: /usr/lib64/libproj.so (found version "9.1.1")
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.0")
-- Found PEGTL: /usr/include/tao (found suitable version "2.8.3", minimum required is "2.0.0")
-- Found JsonCpp: /usr/lib64/libjsoncpp.so (found suitable version "1.9.5", minimum required is "0.7.0")
-- Found LibXml2: /usr/lib64/libxml2.so (found version "2.10.3")
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.13")
-- Found CGNS: /usr/include (found suitable version "4.30", minimum required is "4.10")
-- Found LibHaru: /usr/lib64/libhpdf.so (found suitable version "2.4.3", minimum required is "2.3.0")
-- Found PNG: /usr/lib64/libpng.so (found version "1.6.37")
-- Found nlohmann_json: /usr/share/cmake/nlohmann_json/nlohmann_jsonConfig.cmake (found version "3.11.2")
-- Found Boost: /usr/lib64/cmake/Boost-1.78.0/BoostConfig.cmake (found suitable exact version "1.78.0")
-- Found Boost: /usr/lib64/cmake/Boost-1.78.0/BoostConfig.cmake (found suitable exact version "1.78.0") found components: serialization
-- Found SQLite3: /usr/include (found version "3.40.1")
-- Found GDAL: /usr/lib64/libgdal.so (found version "3.6.2")
-- Found Eigen3: /usr/include/eigen3 (found version "3.4.0")
-- Found OpenSlide: /usr/lib64/libopenslide.so
-- Found X11: /usr/include
-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so
-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found LibArchive: /usr/lib64/libarchive.so (found version "3.6.1")
-- Found EXPAT: /usr/lib64/libexpat.so (found version "2.5.0")
-- Found double-conversion: /usr/lib64/libdouble-conversion.so
-- Found LZ4: /usr/lib64/liblz4.so (found version "1.9.4")
-- Found LZMA: /usr/lib64/liblzma.so (found version "5.2.9")
-- Found JPEG: /usr/lib64/libjpeg.so (found version "62")
-- Found TIFF: /usr/lib64/libtiff.so (found version "4.4.0")
-- Found Freetype: /usr/lib64/libfreetype.so (found version "2.12.1")
-- Configuring done
CMake Warning (dev) at test/CMakeLists.txt:21 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_createTestImage" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at test/CMakeLists.txt:24 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_compareImages" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:21 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_gtm" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:24 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_labbe" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:27 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_mtc" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:30 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_rbv" links to:
GTest::GTest
but the target was not found. Possible r-- Generating done
easons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:33 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_iy" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:36 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_diy" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:39 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_mg" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:42 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_vc" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:45 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_rl" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:48 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_stc" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:51 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "petpvc" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:54 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_simulate" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:57 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_make4d" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at src/CMakeLists.txt:60 (TARGET_LINK_LIBRARIES):
Policy CMP0028 is not set: Double colon in target name means ALIAS or
IMPORTED target. Run "cmake --help-policy CMP0028" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
Target "pvc_relabel" links to:
GTest::GTest
but the target was not found. Possible reasons include:
* There is a typo in the target name.
* A find_package call is missing for an IMPORTED target.
* An ALIAS target is missing.
This warning is for project developers. Use -Wno-dev to suppress it.
-- Build files have been written to: /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_C_FLAGS_RELEASE
CMAKE_Fortran_FLAGS_RELEASE
CMAKE_INSTALL_DO_STRIP
INCLUDE_INSTALL_DIR
LIB_INSTALL_DIR
LIB_SUFFIX
SHARE_INSTALL_PREFIX
SYSCONF_INSTALL_DIR
+ grep -r GTest::Main -l
+ xargs sed -r -i 's/GTest::Main/gtest_main/; s/GTest::GTest/gtest/'
+ /usr/bin/cmake --build redhat-linux-build -j2 --verbose
/usr/bin/cmake -S/builddir/build/BUILD/PETPVC-1.2.10 -B/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/CMakeFiles /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build//CMakeFiles/progress.marks
/usr/bin/gmake -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f test/CMakeFiles/pvc_createTestImage.dir/build.make test/CMakeFiles/pvc_createTestImage.dir/depend
/usr/bin/gmake -f test/CMakeFiles/pvc_compareImages.dir/build.make test/CMakeFiles/pvc_compareImages.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/test /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/test /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/test/CMakeFiles/pvc_createTestImage.dir/DependInfo.cmake --color=
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/test /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/test /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/test/CMakeFiles/pvc_compareImages.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f test/CMakeFiles/pvc_compareImages.dir/build.make test/CMakeFiles/pvc_compareImages.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f test/CMakeFiles/pvc_createTestImage.dir/build.make test/CMakeFiles/pvc_createTestImage.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 3%] Building CXX object test/CMakeFiles/pvc_compareImages.dir/CompareImages.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/test && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT test/CMakeFiles/pvc_compareImages.dir/CompareImages.cxx.o -MF CMakeFiles/pvc_compareImages.dir/CompareImages.cxx.o.d -o CMakeFiles/pvc_compareImages.dir/CompareImages.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/test/CompareImages.cxx
[ 6%] Building CXX object test/CMakeFiles/pvc_createTestImage.dir/CreateTestImage.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/test && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT test/CMakeFiles/pvc_createTestImage.dir/CreateTestImage.cxx.o -MF CMakeFiles/pvc_createTestImage.dir/CreateTestImage.cxx.o.d -o CMakeFiles/pvc_createTestImage.dir/CreateTestImage.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/test/CreateTestImage.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkDataObject.h:31,
from /usr/include/InsightToolkit/itkProcessObject.h:31,
from /usr/include/InsightToolkit/itkImageSource.h:31,
from /usr/include/InsightToolkit/itkSpatialObjectToImageFilter.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/test/CreateTestImage.cxx:36:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkLightProcessObject.h:21,
from /usr/include/InsightToolkit/itkImageIOBase.h:24,
from /usr/include/InsightToolkit/itkImageFileReader.h:24,
from /builddir/build/BUILD/PETPVC-1.2.10/test/CompareImages.cxx:25:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 9%] Linking CXX executable pvc_compareImages
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_compareImages.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_compareImages.dir/CompareImages.cxx.o -o pvc_compareImages -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
In file included from /usr/include/InsightToolkit/itkSymmetricEigenAnalysis.h:315,
from /usr/include/InsightToolkit/itkSymmetricSecondRankTensor.h:29,
from /usr/include/InsightToolkit/itkTransform.h:23,
from /usr/include/InsightToolkit/itkMatrixOffsetTransformBase.h:24,
from /usr/include/InsightToolkit/itkAffineTransform.h:21,
from /usr/include/InsightToolkit/itkScalableAffineTransform.h:21,
from /usr/include/InsightToolkit/itkAffineGeometryFrame.h:23,
from /usr/include/InsightToolkit/itkSpatialObject.h:23,
from /usr/include/InsightToolkit/itkEllipseSpatialObject.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/test/CreateTestImage.cxx:37:
In member function 'itk::SymmetricEigenAnalysis<itk::Matrix<double, 3u, 3u>, itk::FixedArray<double, 3u>, itk::Matrix<double, 3u, 3u> >::ComputeEigenValuesAndVectors(itk::Matrix<double, 3u, 3u> const&, itk::FixedArray<double, 3u>&, itk::Matrix<double, 3u, 3u>&) const',
inlined from 'itk::SymmetricSecondRankTensor<double, 3u>::ComputeEigenAnalysis(itk::FixedArray<double, 3u>&, itk::Matrix<double, 3u, 3u>&) const' at /usr/include/InsightToolkit/itkSymmetricSecondRankTensor.hxx:311:52,
inlined from 'itk::Transform<double, 3u, 3u>::PreservationOfPrincipalDirectionDiffusionTensor3DReorientation(itk::DiffusionTensor3D<double>, itk::Array2D<double>) const [clone .isra.0]' at /usr/include/InsightToolkit/itkTransform.hxx:360:35:
/usr/include/InsightToolkit/itkSymmetricEigenAnalysis.hxx:85:20: warning: 'MEM <uint128_t> [(char * {ref-all})&eigenValues + 8B]' is used uninitialized [-Wuninitialized]
85 | dVector[row] = EigenValues[row];
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
In file included from /usr/include/InsightToolkit/itkTransform.h:606:
/usr/include/InsightToolkit/itkTransform.hxx: In function 'itk::Transform<double, 3u, 3u>::PreservationOfPrincipalDirectionDiffusionTensor3DReorientation(itk::DiffusionTensor3D<double>, itk::Array2D<double>) const [clone .isra.0]':
/usr/include/InsightToolkit/itkTransform.hxx:358:61: note: 'eigenValues' declared here
358 | typename InputDiffusionTensor3DType::EigenValuesArrayType eigenValues;
| ^~~~~~~~~~~
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 9%] Built target pvc_compareImages
/usr/bin/gmake -f src/CMakeFiles/pvc_gtm.dir/build.make src/CMakeFiles/pvc_gtm.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_gtm.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_gtm.dir/build.make src/CMakeFiles/pvc_gtm.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 12%] Building CXX object src/CMakeFiles/pvc_gtm.dir/GTM.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_gtm.dir/GTM.cxx.o -MF CMakeFiles/pvc_gtm.dir/GTM.cxx.o.d -o CMakeFiles/pvc_gtm.dir/GTM.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/GTM.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/GTM.cxx:29:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 15%] Linking CXX executable pvc_createTestImage
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_createTestImage.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_createTestImage.dir/CreateTestImage.cxx.o -o pvc_createTestImage -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 15%] Built target pvc_createTestImage
/usr/bin/gmake -f src/CMakeFiles/pvc_labbe.dir/build.make src/CMakeFiles/pvc_labbe.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_labbe.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_labbe.dir/build.make src/CMakeFiles/pvc_labbe.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 18%] Building CXX object src/CMakeFiles/pvc_labbe.dir/Labbe.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_labbe.dir/Labbe.cxx.o -MF CMakeFiles/pvc_labbe.dir/Labbe.cxx.o.d -o CMakeFiles/pvc_labbe.dir/Labbe.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/Labbe.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/Labbe.cxx:33:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 21%] Linking CXX executable pvc_gtm
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_gtm.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_gtm.dir/GTM.cxx.o -o pvc_gtm -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 21%] Built target pvc_gtm
/usr/bin/gmake -f src/CMakeFiles/pvc_mtc.dir/build.make src/CMakeFiles/pvc_mtc.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_mtc.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
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gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 25%] Building CXX object src/CMakeFiles/pvc_mtc.dir/MTC.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_mtc.dir/MTC.cxx.o -MF CMakeFiles/pvc_mtc.dir/MTC.cxx.o.d -o CMakeFiles/pvc_mtc.dir/MTC.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/MTC.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/MTC.cxx:31:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 28%] Linking CXX executable pvc_labbe
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_labbe.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_labbe.dir/Labbe.cxx.o -o pvc_labbe -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 28%] Built target pvc_labbe
/usr/bin/gmake -f src/CMakeFiles/pvc_rbv.dir/build.make src/CMakeFiles/pvc_rbv.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_rbv.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_rbv.dir/build.make src/CMakeFiles/pvc_rbv.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 31%] Building CXX object src/CMakeFiles/pvc_rbv.dir/RBV.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_rbv.dir/RBV.cxx.o -MF CMakeFiles/pvc_rbv.dir/RBV.cxx.o.d -o CMakeFiles/pvc_rbv.dir/RBV.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/RBV.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/RBV.cxx:34:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 34%] Linking CXX executable pvc_mtc
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_mtc.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_mtc.dir/MTC.cxx.o -o pvc_mtc -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 34%] Built target pvc_mtc
/usr/bin/gmake -f src/CMakeFiles/pvc_iy.dir/build.make src/CMakeFiles/pvc_iy.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_iy.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_iy.dir/build.make src/CMakeFiles/pvc_iy.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 37%] Building CXX object src/CMakeFiles/pvc_iy.dir/IterativeYang.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_iy.dir/IterativeYang.cxx.o -MF CMakeFiles/pvc_iy.dir/IterativeYang.cxx.o.d -o CMakeFiles/pvc_iy.dir/IterativeYang.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/IterativeYang.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/IterativeYang.cxx:34:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 40%] Linking CXX executable pvc_rbv
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_rbv.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_rbv.dir/RBV.cxx.o -o pvc_rbv -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 40%] Built target pvc_rbv
/usr/bin/gmake -f src/CMakeFiles/pvc_diy.dir/build.make src/CMakeFiles/pvc_diy.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_diy.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_diy.dir/build.make src/CMakeFiles/pvc_diy.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 43%] Building CXX object src/CMakeFiles/pvc_diy.dir/DiscreteIY.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_diy.dir/DiscreteIY.cxx.o -MF CMakeFiles/pvc_diy.dir/DiscreteIY.cxx.o.d -o CMakeFiles/pvc_diy.dir/DiscreteIY.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/DiscreteIY.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/DiscreteIY.cxx:33:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 46%] Linking CXX executable pvc_iy
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_iy.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_iy.dir/IterativeYang.cxx.o -o pvc_iy -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 46%] Built target pvc_iy
/usr/bin/gmake -f src/CMakeFiles/pvc_mg.dir/build.make src/CMakeFiles/pvc_mg.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_mg.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_mg.dir/build.make src/CMakeFiles/pvc_mg.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 50%] Building CXX object src/CMakeFiles/pvc_mg.dir/MullerGartner.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_mg.dir/MullerGartner.cxx.o -MF CMakeFiles/pvc_mg.dir/MullerGartner.cxx.o.d -o CMakeFiles/pvc_mg.dir/MullerGartner.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/MullerGartner.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/MullerGartner.cxx:32:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 53%] Linking CXX executable pvc_diy
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_diy.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_diy.dir/DiscreteIY.cxx.o -o pvc_diy -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 53%] Built target pvc_diy
/usr/bin/gmake -f src/CMakeFiles/pvc_vc.dir/build.make src/CMakeFiles/pvc_vc.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_vc.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_vc.dir/build.make src/CMakeFiles/pvc_vc.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 56%] Building CXX object src/CMakeFiles/pvc_vc.dir/VanCittert.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_vc.dir/VanCittert.cxx.o -MF CMakeFiles/pvc_vc.dir/VanCittert.cxx.o.d -o CMakeFiles/pvc_vc.dir/VanCittert.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/VanCittert.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/VanCittert.cxx:32:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 59%] Linking CXX executable pvc_mg
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_mg.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_mg.dir/MullerGartner.cxx.o -o pvc_mg -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
[ 62%] Linking CXX executable pvc_vc
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_vc.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_vc.dir/VanCittert.cxx.o -o pvc_vc -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 62%] Built target pvc_vc
/usr/bin/gmake -f src/CMakeFiles/pvc_rl.dir/build.make src/CMakeFiles/pvc_rl.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_rl.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_rl.dir/build.make src/CMakeFiles/pvc_rl.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 65%] Building CXX object src/CMakeFiles/pvc_rl.dir/RichardsonLucy.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_rl.dir/RichardsonLucy.cxx.o -MF CMakeFiles/pvc_rl.dir/RichardsonLucy.cxx.o.d -o CMakeFiles/pvc_rl.dir/RichardsonLucy.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/RichardsonLucy.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/RichardsonLucy.cxx:31:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 65%] Built target pvc_mg
/usr/bin/gmake -f src/CMakeFiles/pvc_stc.dir/build.make src/CMakeFiles/pvc_stc.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_stc.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_stc.dir/build.make src/CMakeFiles/pvc_stc.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 68%] Building CXX object src/CMakeFiles/pvc_stc.dir/STC.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_stc.dir/STC.cxx.o -MF CMakeFiles/pvc_stc.dir/STC.cxx.o.d -o CMakeFiles/pvc_stc.dir/STC.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/STC.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/STC.cxx:35:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 71%] Linking CXX executable pvc_rl
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_rl.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_rl.dir/RichardsonLucy.cxx.o -o pvc_rl -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
[ 75%] Linking CXX executable pvc_stc
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_stc.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_stc.dir/STC.cxx.o -o pvc_stc -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 75%] Built target pvc_rl
/usr/bin/gmake -f src/CMakeFiles/petpvc.dir/build.make src/CMakeFiles/petpvc.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/petpvc.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/petpvc.dir/build.make src/CMakeFiles/petpvc.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 78%] Building CXX object src/CMakeFiles/petpvc.dir/PETPVC.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/petpvc.dir/PETPVC.cxx.o -MF CMakeFiles/petpvc.dir/PETPVC.cxx.o.d -o CMakeFiles/petpvc.dir/PETPVC.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/PETPVC.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/PETPVC.cxx:25:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
/builddir/build/BUILD/PETPVC-1.2.10/src/PETPVC.cxx: In function 'int main(int, char**)':
/builddir/build/BUILD/PETPVC-1.2.10/src/PETPVC.cxx:1359:57: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
1359 | for (int n=0; n < results.size(); n++)
| ~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/PETPVC-1.2.10/src/PETPVC.cxx:1396:57: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
1396 | for (int n=0; n < results.size(); n++)
| ~~^~~~~~~~~~~~~~~~
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 78%] Built target pvc_stc
/usr/bin/gmake -f src/CMakeFiles/pvc_simulate.dir/build.make src/CMakeFiles/pvc_simulate.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_simulate.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_simulate.dir/build.make src/CMakeFiles/pvc_simulate.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 81%] Building CXX object src/CMakeFiles/pvc_simulate.dir/Simulate.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_simulate.dir/Simulate.cxx.o -MF CMakeFiles/pvc_simulate.dir/Simulate.cxx.o.d -o CMakeFiles/pvc_simulate.dir/Simulate.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/Simulate.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/Simulate.cxx:28:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[ 84%] Linking CXX executable pvc_simulate
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_simulate.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_simulate.dir/Simulate.cxx.o -o pvc_simulate -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 84%] Built target pvc_simulate
/usr/bin/gmake -f src/CMakeFiles/pvc_make4d.dir/build.make src/CMakeFiles/pvc_make4d.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_make4d.dir/DependInfo.cmake --color=
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/gmake -f src/CMakeFiles/pvc_make4d.dir/build.make src/CMakeFiles/pvc_make4d.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 87%] Building CXX object src/CMakeFiles/pvc_make4d.dir/Make4D.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_make4d.dir/Make4D.cxx.o -MF CMakeFiles/pvc_make4d.dir/Make4D.cxx.o.d -o CMakeFiles/pvc_make4d.dir/Make4D.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/Make4D.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/Make4D.cxx:29:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
/builddir/build/BUILD/PETPVC-1.2.10/src/Make4D.cxx: In function 'int main(int, char**)':
/builddir/build/BUILD/PETPVC-1.2.10/src/Make4D.cxx:129:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<short int, std::allocator<short int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
129 | for (int i = 0; i < allLabels.size(); i++)
| ~~^~~~~~~~~~~~~~~~~~
In file included from /usr/include/InsightToolkit/itkSymmetricEigenAnalysis.h:315,
from /usr/include/InsightToolkit/itkSymmetricSecondRankTensor.h:29,
from /usr/include/InsightToolkit/itkImageIOBase.h:30,
from /usr/include/InsightToolkit/itkImageFileReader.h:24,
from /builddir/build/BUILD/PETPVC-1.2.10/src/Make4D.cxx:30:
In member function 'itk::SymmetricEigenAnalysis<itk::Matrix<double, 3u, 3u>, itk::FixedArray<double, 3u>, itk::Matrix<double, 3u, 3u> >::ComputeEigenValuesAndVectors(itk::Matrix<double, 3u, 3u> const&, itk::FixedArray<double, 3u>&, itk::Matrix<double, 3u, 3u>&) const',
inlined from 'itk::SymmetricSecondRankTensor<double, 3u>::ComputeEigenAnalysis(itk::FixedArray<double, 3u>&, itk::Matrix<double, 3u, 3u>&) const' at /usr/include/InsightToolkit/itkSymmetricSecondRankTensor.hxx:311:52,
inlined from 'itk::Transform<double, 3u, 3u>::PreservationOfPrincipalDirectionDiffusionTensor3DReorientation(itk::DiffusionTensor3D<double>, itk::Array2D<double>) const [clone .isra.0]' at /usr/include/InsightToolkit/itkTransform.hxx:360:35:
/usr/include/InsightToolkit/itkSymmetricEigenAnalysis.hxx:85:20: warning: 'MEM <uint128_t> [(char * {ref-all})&eigenValues + 8B]' is used uninitialized [-Wuninitialized]
85 | dVector[row] = EigenValues[row];
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
In file included from /usr/include/InsightToolkit/itkTransform.h:606,
from /usr/include/InsightToolkit/itkMatrixOffsetTransformBase.h:24,
from /usr/include/InsightToolkit/itkAffineTransform.h:21,
from /usr/include/InsightToolkit/itkLabelGeometryImageFilter.hxx:27,
from /usr/include/InsightToolkit/itkLabelGeometryImageFilter.h:494,
from /builddir/build/BUILD/PETPVC-1.2.10/src/Make4D.cxx:33:
/usr/include/InsightToolkit/itkTransform.hxx: In function 'itk::Transform<double, 3u, 3u>::PreservationOfPrincipalDirectionDiffusionTensor3DReorientation(itk::DiffusionTensor3D<double>, itk::Array2D<double>) const [clone .isra.0]':
/usr/include/InsightToolkit/itkTransform.hxx:358:61: note: 'eigenValues' declared here
358 | typename InputDiffusionTensor3DType::EigenValuesArrayType eigenValues;
| ^~~~~~~~~~~
[ 90%] Linking CXX executable petpvc
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/petpvc.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/petpvc.dir/PETPVC.cxx.o -o petpvc -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
[ 93%] Linking CXX executable pvc_make4d
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_make4d.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_make4d.dir/Make4D.cxx.o -o pvc_make4d -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 93%] Built target pvc_make4d
/usr/bin/gmake -f src/CMakeFiles/pvc_relabel.dir/build.make src/CMakeFiles/pvc_relabel.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PETPVC-1.2.10 /builddir/build/BUILD/PETPVC-1.2.10/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src/CMakeFiles/pvc_relabel.dir/DependInfo.cmake --color=
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gmake[2]: Entering directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[ 96%] Building CXX object src/CMakeFiles/pvc_relabel.dir/Relabel.cxx.o
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/g++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/ITKFactoryRegistration -I/usr/include/libminc -I/usr/include/vxl/core -I/usr/include/vxl/vcl -I/usr/include/vxl/v3p/netlib -I/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/config -I/builddir/build/BUILD/PETPVC-1.2.10/src -I/builddir/build/BUILD/PETPVC-1.2.10/lib -isystem /usr/include/gdcm -isystem /usr/include/InsightToolkit -isystem /usr/include/vtk -isystem /usr/include/freetype2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -MD -MT src/CMakeFiles/pvc_relabel.dir/Relabel.cxx.o -MF CMakeFiles/pvc_relabel.dir/Relabel.cxx.o.d -o CMakeFiles/pvc_relabel.dir/Relabel.cxx.o -c /builddir/build/BUILD/PETPVC-1.2.10/src/Relabel.cxx
In file included from /usr/include/InsightToolkit/itkNumericTraits.h:51,
from /usr/include/InsightToolkit/itkConceptChecking.h:32,
from /usr/include/InsightToolkit/itkAtomicIntDetail.h:39,
from /usr/include/InsightToolkit/itkAtomicInt.h:38,
from /usr/include/InsightToolkit/itkTimeStamp.h:33,
from /usr/include/InsightToolkit/itkLightObject.h:23,
from /usr/include/InsightToolkit/itkObject.h:31,
from /usr/include/InsightToolkit/itkRegion.h:31,
from /usr/include/InsightToolkit/itkImageRegion.h:31,
from /usr/include/InsightToolkit/itkImage.h:21,
from /builddir/build/BUILD/PETPVC-1.2.10/src/Relabel.cxx:25:
/usr/include/vxl/vcl/vcl_limits.h:11:5: warning: #warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py" [-Wcpp]
11 | # warning "This header will be removed in future versions of VXL. Use equivalent C++11 header instead. see: vxl/scripts/UseStandardHeaders.py"
| ^~~~~~~
[100%] Linking CXX executable pvc_relabel
cd /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvc_relabel.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++11 -Wno-unused-variable -Wno-unused-but-set-variable -Wno-unused-local-typedefs -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic CMakeFiles/pvc_relabel.dir/Relabel.cxx.o -o pvc_relabel -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lz -ljpeg -lpng -ltiff /usr/lib64/libITKDICOMParser-4.13.so.1 -lexpat /usr/lib64/libITKIOMesh-4.13.so.1 -lgtest -lgtest_main -lhdf5_cpp -lhdf5 /usr/lib64/libITKIOBruker-4.13.so.1 /usr/lib64/libITKIOCSV-4.13.so.1 /usr/lib64/libITKIOHDF5-4.13.so.1 /usr/lib64/libITKIOLSM-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib64/libITKIOMINC-4.13.so.1 /usr/lib64/libITKIOMRC-4.13.so.1 /usr/lib64/libITKOptimizersv4-4.13.so.1 /usr/lib64/libITKReview-4.13.so.1 /usr/lib64/libITKVideoIO-4.13.so.1 /usr/lib64/libITKVtkGlue-4.13.so.1 /usr/lib64/libITKgiftiio-4.13.so.1 -lexpat /usr/lib64/libitklbfgs-4.13.so.1 /usr/lib64/libITKIOBMP-4.13.so.1 /usr/lib64/libITKIOGDCM-4.13.so.1 /usr/lib64/libgdcmMSFF.so.3.0.12 /usr/lib64/libgdcmDICT.so.3.0.12 /usr/lib64/libgdcmIOD.so.3.0.12 /usr/lib64/libgdcmDSED.so.3.0.12 /usr/lib64/libgdcmCommon.so.3.0.12 /usr/lib64/libITKIOGIPL-4.13.so.1 /usr/lib64/libITKIOJPEG-4.13.so.1 /usr/lib64/libITKIOMeta-4.13.so.1 /usr/lib64/libITKIONIFTI-4.13.so.1 /usr/lib64/libITKniftiio-4.13.so.1 /usr/lib64/libITKznz-4.13.so.1 /usr/lib64/libITKIONRRD-4.13.so.1 /usr/lib64/libITKNrrdIO-4.13.so.1 /usr/lib64/libITKIOPNG-4.13.so.1 /usr/lib64/libITKIOTIFF-4.13.so.1 /usr/lib64/libITKIOVTK-4.13.so.1 /usr/lib64/libITKLabelMap-4.13.so.1 /usr/lib64/libITKQuadEdgeMesh-4.13.so.1 /usr/lib64/libITKPolynomials-4.13.so.1 /usr/lib64/libITKBiasCorrection-4.13.so.1 /usr/lib64/libITKBioCell-4.13.so.1 /usr/lib64/libITKFFT-4.13.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib64/libITKIOSpatialObjects-4.13.so.1 /usr/lib64/libITKIOXML-4.13.so.1 /usr/lib64/libITKFEM-4.13.so.1 /usr/lib64/libITKMetaIO-4.13.so.1 -lz /usr/lib64/libITKOptimizers-4.13.so.1 /usr/lib64/libITKIOBioRad-4.13.so.1 /usr/lib64/libITKIOGE-4.13.so.1 /usr/lib64/libITKIOSiemens-4.13.so.1 /usr/lib64/libITKIOIPL-4.13.so.1 /usr/lib64/libITKIOStimulate-4.13.so.1 /usr/lib64/libITKIOTransformHDF5-4.13.so.1 /usr/lib64/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib64/libITKIOTransformMatlab-4.13.so.1 /usr/lib64/libITKIOTransformBase-4.13.so.1 /usr/lib64/libITKTransformFactory-4.13.so.1 /usr/lib64/libITKKLMRegionGrowing-4.13.so.1 /usr/lib64/libITKWatersheds-4.13.so.1 /usr/lib64/libITKStatistics-4.13.so.1 /usr/lib64/libitkNetlibSlatec-4.13.so.1 /usr/lib64/libITKSpatialObjects-4.13.so.1 /usr/lib64/libITKMesh-4.13.so.1 /usr/lib64/libITKTransform-4.13.so.1 /usr/lib64/libITKPath-4.13.so.1 /usr/lib64/libitkopenjpeg-4.13.so.1 -lm /usr/lib64/libITKIOImageBase-4.13.so.1 /usr/lib64/libITKVideoCore-4.13.so.1 /usr/lib64/libITKVTK-4.13.so.1 /usr/lib64/libITKCommon-4.13.so.1 /usr/lib64/libitkdouble-conversion-4.13.so.1 /usr/lib64/libitksys-4.13.so.1 /usr/lib64/libITKVNLInstantiation-4.13.so.1 -lvnl_algo -lvnl -lv3p_netlib -lnetlib -lvcl -lm /usr/lib64/libvtkRenderingOpenGL2.so.9.2.5 /usr/lib64/libvtkRenderingHyperTreeGrid.so.9.2.5 /usr/lib64/libvtkRenderingUI.so.9.2.5 /usr/lib64/libGLEW.so /usr/lib64/libX11.so /usr/lib64/libvtkRenderingFreeType.so.9.2.5 /usr/lib64/libfreetype.so /usr/lib64/libvtkInteractionStyle.so.9.2.5 /usr/lib64/libvtkRenderingCore.so.9.2.5 /usr/lib64/libvtkFiltersGeneral.so.9.2.5 /usr/lib64/libvtkFiltersCore.so.9.2.5 /usr/lib64/libvtkIOImage.so.9.2.5 /usr/lib64/libvtkImagingSources.so.9.2.5 /usr/lib64/libvtkImagingCore.so.9.2.5 /usr/lib64/libvtkCommonExecutionModel.so.9.2.5 /usr/lib64/libvtkCommonDataModel.so.9.2.5 /usr/lib64/libvtkCommonMisc.so.9.2.5 /usr/lib64/libvtkCommonTransforms.so.9.2.5 /usr/lib64/libvtkCommonMath.so.9.2.5 /usr/lib64/libvtkCommonCore.so.9.2.5 /usr/lib64/libvtksys.so.9.2.5 -ldl /usr/lib64/libvtkkissfft.so.9.2.5
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[100%] Built target petpvc
gmake[2]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
[100%] Built target pvc_relabel
gmake[1]: Leaving directory '/builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build/CMakeFiles 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.zQQzUS
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64
++ dirname /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd PETPVC-1.2.10
+ DESTDIR=/builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64
+ /usr/bin/cmake --install redhat-linux-build
-- Install configuration: "Release"
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_gtm
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_labbe
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_rbv
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_iy
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_diy
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_mg
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_mtc
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_vc
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_rl
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_stc
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/petpvc
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_simulate
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_make4d
-- Installing: /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_relabel
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.2.10-5.fc38 --unique-debug-suffix -1.2.10-5.fc38.x86_64 --unique-debug-src-base petpvc-1.2.10-5.fc38.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/PETPVC-1.2.10
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/petpvc
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_diy
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_gtm
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_iy
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_labbe
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_make4d
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_mg
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_mtc
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_rbv
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_relabel
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_rl
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_simulate
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_stc
extracting debug info from /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/bin/pvc_vc
original debug info size: 54112kB, size after compression: 40800kB
/usr/bin/sepdebugcrcfix: Updated 14 CRC32s, 0 CRC32s did match.
725 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
*** WARNING: ./usr/src/debug/petpvc-1.2.10-5.fc38.x86_64/src/Relabel.cxx is executable but has no shebang, removing executable bit
*** WARNING: ./usr/src/debug/petpvc-1.2.10-5.fc38.x86_64/src/Make4D.cxx is executable but has no shebang, removing executable bit
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j1
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.iS9K6R
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd PETPVC-1.2.10
+ /usr/bin/ctest --test-dir redhat-linux-build --output-on-failure --force-new-ctest-process -j1
Internal ctest changing into directory: /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build
Test project /builddir/build/BUILD/PETPVC-1.2.10/redhat-linux-build
Start 1: generate
1/23 Test #1: generate ................................... Passed 0.13 sec
Start 2: simulate
2/23 Test #2: simulate ................................... Passed 0.04 sec
Start 3: RunIterativeYang
3/23 Test #3: RunIterativeYang ........................... Passed 0.16 sec
Start 4: CompareIterativeYang
4/23 Test #4: CompareIterativeYang ....................... Passed 0.04 sec
Start 5: RunIterativeYangUndercorrect
5/23 Test #5: RunIterativeYangUndercorrect ............... Passed 0.14 sec
Start 6: CompareIterativeYangUndercorrect
6/23 Test #6: CompareIterativeYangUndercorrect ........... Passed 0.04 sec
Start 7: RunIterativeYangOvercorrect
7/23 Test #7: RunIterativeYangOvercorrect ................ Passed 0.16 sec
Start 8: CompareIterativeYangOvercorrect
8/23 Test #8: CompareIterativeYangOvercorrect ............ Passed 0.04 sec
Start 9: RunRBV
9/23 Test #9: RunRBV ..................................... Passed 0.09 sec
Start 10: CompareRBV
10/23 Test #10: CompareRBV ................................. Passed 0.04 sec
Start 11: RunRBVUndercorrect
11/23 Test #11: RunRBVUndercorrect ......................... Passed 0.08 sec
Start 12: CompareRBVUndercorrect
12/23 Test #12: CompareRBVUndercorrect ..................... Passed 0.04 sec
Start 13: RunRBVOvercorrect
13/23 Test #13: RunRBVOvercorrect .......................... Passed 0.09 sec
Start 14: CompareRBVOvercorrect
14/23 Test #14: CompareRBVOvercorrect ...................... Passed 0.04 sec
Start 15: RunDiscreteIterativeYang
15/23 Test #15: RunDiscreteIterativeYang ................... Passed 0.14 sec
Start 16: CompareDiscreteIterativeYang
16/23 Test #16: CompareDiscreteIterativeYang ............... Passed 0.04 sec
Start 17: RunDiscreteIterativeYangUndercorrect
17/23 Test #17: RunDiscreteIterativeYangUndercorrect ....... Passed 0.12 sec
Start 18: CompareDiscreteIterativeYangUndercorrect
18/23 Test #18: CompareDiscreteIterativeYangUndercorrect ... Passed 0.04 sec
Start 19: RunDiscreteIterativeYangOvercorrect
19/23 Test #19: RunDiscreteIterativeYangOvercorrect ........ Passed 0.14 sec
Start 20: CompareDiscreteIterativeYangOvercorrect
20/23 Test #20: CompareDiscreteIterativeYangOvercorrect .... Passed 0.04 sec
Start 21: Compare_iy_diy
21/23 Test #21: Compare_iy_diy ............................. Passed 0.04 sec
Start 22: Compare_iy_diy_Undercorrect
22/23 Test #22: Compare_iy_diy_Undercorrect ................ Passed 0.04 sec
Start 23: Compare_iy_diy_Overcorrect
23/23 Test #23: Compare_iy_diy_Overcorrect ................. Passed 0.04 sec
100% tests passed, 0 tests failed out of 23
Total Test time (real) = 1.75 sec
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: petpvc-1.2.10-5.fc38.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.fU4MFJ
+ umask 022
+ cd /builddir/build/BUILD
+ cd PETPVC-1.2.10
+ DOCDIR=/builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/share/doc/petpvc
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/share/doc/petpvc
+ cp -pr README.md /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/share/doc/petpvc
+ cp -pr parc /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/share/doc/petpvc
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.0LQZLc
+ umask 022
+ cd /builddir/build/BUILD
+ cd PETPVC-1.2.10
+ LICENSEDIR=/builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/share/licenses/petpvc
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/share/licenses/petpvc
+ cp -pr LICENSE.txt /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64/usr/share/licenses/petpvc
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: petpvc = 1.2.10-5.fc38 petpvc(x86-64) = 1.2.10-5.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libITKCommon-4.13.so.1()(64bit) libITKIOBMP-4.13.so.1()(64bit) libITKIOBioRad-4.13.so.1()(64bit) libITKIOBruker-4.13.so.1()(64bit) libITKIOGDCM-4.13.so.1()(64bit) libITKIOGE-4.13.so.1()(64bit) libITKIOGIPL-4.13.so.1()(64bit) libITKIOHDF5-4.13.so.1()(64bit) libITKIOImageBase-4.13.so.1()(64bit) libITKIOJPEG-4.13.so.1()(64bit) libITKIOLSM-4.13.so.1()(64bit) libITKIOMINC-4.13.so.1()(64bit) libITKIOMRC-4.13.so.1()(64bit) libITKIOMeta-4.13.so.1()(64bit) libITKIONIFTI-4.13.so.1()(64bit) libITKIONRRD-4.13.so.1()(64bit) libITKIOPNG-4.13.so.1()(64bit) libITKIOStimulate-4.13.so.1()(64bit) libITKIOTIFF-4.13.so.1()(64bit) libITKIOVTK-4.13.so.1()(64bit) libITKMetaIO-4.13.so.1()(64bit) libITKStatistics-4.13.so.1()(64bit) libITKTransform-4.13.so.1()(64bit) libITKTransformFactory-4.13.so.1()(64bit) libITKVtkGlue-4.13.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libitksys-4.13.so.1()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvnl.so.2.0()(64bit) libvnl_algo.so.2.0()(64bit) rtld(GNU_HASH)
Processing files: petpvc-debugsource-1.2.10-5.fc38.x86_64
Provides: petpvc-debugsource = 1.2.10-5.fc38 petpvc-debugsource(x86-64) = 1.2.10-5.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: petpvc-debuginfo-1.2.10-5.fc38.x86_64
Provides: debuginfo(build-id) = 01784d9d69b630fcb989f37f0dd75c13e1b04ff8 debuginfo(build-id) = 04c41e8453c45399b5591413646ae84053e685a0 debuginfo(build-id) = 277b037b34f32dfac122b33e9350bb7f226fe446 debuginfo(build-id) = 2ee9242179fe640538bd795fbed30570f52dd9d1 debuginfo(build-id) = 5283c1d82b34c57af6650c57153b9e6881abb990 debuginfo(build-id) = 59592c2c3650d9e4d4a554762461c8bc56597fc3 debuginfo(build-id) = 6f213e0be4bf31dfdb9c8a022dc9a37057e9a341 debuginfo(build-id) = 7625207a296d9ead6bb3f447c3b133e62250ccef debuginfo(build-id) = 80c69d19a44c7c8130407a7fb5bc3e4ad10e9e18 debuginfo(build-id) = a15ddf7a020ab61b9f27996b18297d4dc8b32bde debuginfo(build-id) = adac54ed12034289cbe4702c4facc0c812e7346e debuginfo(build-id) = bd6fe125c7c8ad1e0522486f20404622e81d3e61 debuginfo(build-id) = c3625d7839be3c118f47a8aca5eac45ade613bb6 debuginfo(build-id) = e064d1a9f9ee923fa4920ee04d9445bf994f2b8b petpvc-debuginfo = 1.2.10-5.fc38 petpvc-debuginfo(x86-64) = 1.2.10-5.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: petpvc-debugsource(x86-64) = 1.2.10-5.fc38
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64
Wrote: /builddir/build/RPMS/petpvc-1.2.10-5.fc38.x86_64.rpm
Wrote: /builddir/build/RPMS/petpvc-debugsource-1.2.10-5.fc38.x86_64.rpm
Wrote: /builddir/build/RPMS/petpvc-debuginfo-1.2.10-5.fc38.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.p5JMD5
+ umask 022
+ cd /builddir/build/BUILD
+ cd PETPVC-1.2.10
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/petpvc-1.2.10-5.fc38.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.bHdFlW
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf PETPVC-1.2.10 PETPVC-1.2.10.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0