Warning: Permanently added '3.239.63.198' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 1918281 --chroot fedora-rawhide-x86_64 --detached Version: 0.45 Task: {'background': True, 'build_id': 1918281, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'git_hash': '8560df865137c82ab80f6f896385a22a7adf9f2e', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pygments/apbs.git', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'apbs', 'package_version': '3.0.0-6.fc34', 'project_dirname': 'python-pygments', 'project_name': 'python-pygments', 'project_owner': 'thrnciar', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/thrnciar/python-pygments/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'thrnciar/python-pygments--thrnciar', 'source_json': {}, 'source_type': None, 'submitter': 'thrnciar', 'task_id': '1918281-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pygments/apbs.git /tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pygments/apbs.git', '/tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs'... Running: git checkout 8560df865137c82ab80f6f896385a22a7adf9f2e cmd: ['git', 'checkout', '8560df865137c82ab80f6f896385a22a7adf9f2e'] cwd: /tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs rc: 0 stdout: stderr: Note: switching to '8560df865137c82ab80f6f896385a22a7adf9f2e'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 8560df8 automatic import of apbs Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs rc: 0 stdout: /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading apbs-pdb2pqr-vAPBS-3.0.0.tar.gz INFO: Calling: curl -H Pragma: -o apbs-pdb2pqr-vAPBS-3.0.0.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/thrnciar/python-pygments/apbs/apbs-pdb2pqr-vAPBS-3.0.0.tar.gz/md5/264433d7b064189b342b3796915c7dde/apbs-pdb2pqr-vAPBS-3.0.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 101M 100 101M 0 0 193M 0 --:--:-- --:--:-- --:--:-- 193M INFO: Reading stdout from command: md5sum apbs-pdb2pqr-vAPBS-3.0.0.tar.gz Running (timeout=18000): unbuffer mock --buildsrpm --spec /tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs/apbs.spec --sources /tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1611922105.980445 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.9 starting (python version = 3.9.1, NVR = mock-2.9-1.fc33)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs/apbs.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1611922105.980445/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.9 INFO: Mock Version: 2.9 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk Copr repository 4.2 MB/s | 804 kB 00:00 fedora 12 MB/s | 73 MB 00:06 Last metadata expiration check: 0:00:01 ago on Fri Jan 29 12:08:32 2021. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: [1mdnf [m noarch 4.5.2-1.fc34 fedora 445 k [1mdnf-plugins-core [m noarch 4.0.18-1.fc34 fedora 34 k Installing dependencies: [1malternatives [m x86_64 1.15-1.fc34 fedora 35 k [1maudit-libs [m x86_64 3.0-1.fc34 fedora 113 k [1mbasesystem [m noarch 11-10.fc33 fedora 6.8 k [1mbash [m x86_64 5.1.0-1.fc34 fedora 1.7 M [1mbzip2-libs [m x86_64 1.0.8-4.fc33 fedora 40 k [1mca-certificates [m noarch 2020.2.41-6.fc34 fedora 353 k [1mcoreutils [m x86_64 8.32-15.fc34 fedora 1.1 M [1mcoreutils-common [m x86_64 8.32-15.fc34 fedora 2.0 M [1mcrypto-policies [m noarch 20210127-2.gitb21c811.fc34 fedora 57 k [1mcurl [m x86_64 7.74.0-4.fc34 fedora 299 k [1mcyrus-sasl-lib [m x86_64 2.1.27-6.fc33 fedora 101 k [1mdnf-data [m noarch 4.5.2-1.fc34 fedora 46 k [1melfutils-default-yama-scope 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1.2.11-23.fc34 fedora 92 k Transaction Summary ================================================================================ Install 134 Packages Total download size: 54 M Installed size: 191 M Downloading Packages: (1/134): basesystem-11-10.fc33.noarch.rpm 103 kB/s | 6.8 kB 00:00 (2/134): alternatives-1.15-1.fc34.x86_64.rpm 465 kB/s | 35 kB 00:00 (3/134): bzip2-libs-1.0.8-4.fc33.x86_64.rpm 3.9 MB/s | 40 kB 00:00 (4/134): audit-libs-3.0-1.fc34.x86_64.rpm 1.2 MB/s | 113 kB 00:00 (5/134): ca-certificates-2020.2.41-6.fc34.noarc 11 MB/s | 353 kB 00:00 (6/134): bash-5.1.0-1.fc34.x86_64.rpm 18 MB/s | 1.7 MB 00:00 (7/134): coreutils-8.32-15.fc34.x86_64.rpm 16 MB/s | 1.1 MB 00:00 (8/134): crypto-policies-20210127-2.gitb21c811. 5.5 MB/s | 57 kB 00:00 (9/134): coreutils-common-8.32-15.fc34.x86_64.r 31 MB/s | 2.0 MB 00:00 (10/134): cyrus-sasl-lib-2.1.27-6.fc33.x86_64.r 7.5 MB/s | 101 kB 00:00 (11/134): curl-7.74.0-4.fc34.x86_64.rpm 14 MB/s | 299 kB 00:00 (12/134): 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GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-34-primary (0x45719A39) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x9570FF31: Userid : "Fedora (33) " Fingerprint: 963A 2BEB 0200 9608 FE67 EA42 49FD 7749 9570 FF31 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-33-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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elfutils-default-yama-scope-0.182-2.fc34.noarch 15/134 Verifying : elfutils-libelf-0.182-2.fc34.x86_64 16/134 Verifying : elfutils-libs-0.182-2.fc34.x86_64 17/134 Verifying : expat-2.2.10-1.fc34.x86_64 18/134 Verifying : fedora-gpg-keys-34-0.8.noarch 19/134 Verifying : fedora-release-34-0.10.noarch 20/134 Verifying : fedora-release-common-34-0.10.noarch 21/134 Verifying : fedora-release-identity-basic-34-0.10.noarch 22/134 Verifying : fedora-repos-34-0.8.noarch 23/134 Verifying : fedora-repos-rawhide-34-0.8.noarch 24/134 Verifying : file-libs-5.39-4.fc34.x86_64 25/134 Verifying : filesystem-3.14-4.fc34.x86_64 26/134 Verifying : gawk-5.1.0-2.fc33.x86_64 27/134 Verifying : gdbm-libs-1:1.19-1.fc34.x86_64 28/134 Verifying : glib2-2.67.1-3.fc34.x86_64 29/134 Verifying : glibc-2.32.9000-26.fc34.x86_64 30/134 Verifying : glibc-common-2.32.9000-26.fc34.x86_64 31/134 Verifying : glibc-minimal-langpack-2.32.9000-26.fc34.x86_64 32/134 Verifying : gmp-1:6.2.0-5.fc34.x86_64 33/134 Verifying : gnupg2-2.2.27-1.fc34.x86_64 34/134 Verifying : gnutls-3.6.15-2.fc34.x86_64 35/134 Verifying : gpgme-1.15.1-1.fc34.x86_64 36/134 Verifying : grep-3.6-1.fc34.x86_64 37/134 Verifying : ima-evm-utils-1.3.2-1.fc34.x86_64 38/134 Verifying : json-c-0.14-7.fc33.x86_64 39/134 Verifying : keyutils-libs-1.6.1-1.fc34.x86_64 40/134 Verifying : krb5-libs-1.19-0.beta2.1.fc34.2.x86_64 41/134 Verifying : libacl-2.2.53-9.fc34.x86_64 42/134 Verifying : libarchive-3.5.1-1.fc34.x86_64 43/134 Verifying : libassuan-2.5.4-1.fc34.x86_64 44/134 Verifying : libattr-2.4.48-10.fc33.x86_64 45/134 Verifying : libblkid-2.36.1-4.fc34.x86_64 46/134 Verifying : libbrotli-1.0.9-3.fc34.x86_64 47/134 Verifying : libcap-2.46-1.fc34.x86_64 48/134 Verifying : libcap-ng-0.8.2-1.fc34.x86_64 49/134 Verifying : libcom_err-1.45.6-4.fc33.x86_64 50/134 Verifying : libcomps-0.1.15-5.fc33.x86_64 51/134 Verifying : libcurl-7.74.0-4.fc34.x86_64 52/134 Verifying : libdb-5.3.28-45.fc34.x86_64 53/134 Verifying : libdnf-0.55.2-1.fc34.x86_64 54/134 Verifying : libffi-3.1-27.fc34.x86_64 55/134 Verifying : libgcc-11.0.0-0.17.fc34.x86_64 56/134 Verifying : libgcrypt-1.9.0-1.fc34.x86_64 57/134 Verifying : libgomp-11.0.0-0.17.fc34.x86_64 58/134 Verifying : libgpg-error-1.41-1.fc34.x86_64 59/134 Verifying : libidn2-2.3.0-4.fc34.x86_64 60/134 Verifying : libksba-1.5.0-1.fc34.x86_64 61/134 Verifying : libmetalink-0.1.3-13.fc33.x86_64 62/134 Verifying : libmodulemd-2.12.0-1.fc34.x86_64 63/134 Verifying : libmount-2.36.1-4.fc34.x86_64 64/134 Verifying : libnghttp2-1.42.0-1.fc34.x86_64 65/134 Verifying : libnsl2-1.3.0-1.fc34.x86_64 66/134 Verifying : libpsl-0.21.1-2.fc33.x86_64 67/134 Verifying : librepo-1.12.1-1.fc34.x86_64 68/134 Verifying : libreport-filesystem-2.14.0-15.fc34.noarch 69/134 Verifying : libselinux-3.2-0.rc1.1.fc34.x86_64 70/134 Verifying : libsemanage-3.2-0.rc1.1.fc34.x86_64 71/134 Verifying : libsepol-3.2-0.rc1.1.fc34.x86_64 72/134 Verifying : libsigsegv-2.13-1.fc34.x86_64 73/134 Verifying : libsmartcols-2.36.1-4.fc34.x86_64 74/134 Verifying : libsolv-0.7.17-2.fc34.x86_64 75/134 Verifying : libssh-0.9.5-1.fc34.x86_64 76/134 Verifying : libssh-config-0.9.5-1.fc34.noarch 77/134 Verifying : libstdc++-11.0.0-0.17.fc34.x86_64 78/134 Verifying : libtasn1-4.16.0-3.fc33.x86_64 79/134 Verifying : libtirpc-1.3.1-0.fc34.x86_64 80/134 Verifying : libunistring-0.9.10-9.fc33.x86_64 81/134 Verifying : libusbx-1.0.23-2.fc33.x86_64 82/134 Verifying : libuuid-2.36.1-4.fc34.x86_64 83/134 Verifying : libverto-0.3.1-2.fc34.x86_64 84/134 Verifying : libxcrypt-4.4.17-1.fc34.x86_64 85/134 Verifying : libxml2-2.9.10-9.fc34.x86_64 86/134 Verifying : libyaml-0.2.5-4.fc34.x86_64 87/134 Verifying : libzstd-1.4.7-1.fc34.x86_64 88/134 Verifying : lua-libs-5.4.2-1.fc34.x86_64 89/134 Verifying : lz4-libs-1.9.3-1.fc34.x86_64 90/134 Verifying : mpfr-4.1.0-2.fc33.x86_64 91/134 Verifying : ncurses-base-6.2-3.20200222.fc33.noarch 92/134 Verifying : ncurses-libs-6.2-3.20200222.fc33.x86_64 93/134 Verifying : nettle-3.7-1.fc34.x86_64 94/134 Verifying : npth-1.6-5.fc33.x86_64 95/134 Verifying : openldap-2.4.57-1.fc34.x86_64 96/134 Verifying : openssl-libs-1:1.1.1i-1.fc34.x86_64 97/134 Verifying : p11-kit-0.23.22-3.fc34.x86_64 98/134 Verifying : p11-kit-trust-0.23.22-3.fc34.x86_64 99/134 Verifying : pcre-8.44-3.fc34.x86_64 100/134 Verifying : pcre2-10.36-2.fc34.x86_64 101/134 Verifying : pcre2-syntax-10.36-2.fc34.noarch 102/134 Verifying : popt-1.18-2.fc34.x86_64 103/134 Verifying : publicsuffix-list-dafsa-20190417-4.fc33.noarch 104/134 Verifying : python-pip-wheel-21.0-1.fc34.noarch 105/134 Verifying : python-setuptools-wheel-52.0.0-1.fc34.noarch 106/134 Verifying : python3-3.9.1-4.fc34.x86_64 107/134 Verifying : python3-dateutil-1:2.8.1-2.fc33.noarch 108/134 Verifying : python3-distro-1.5.0-4.fc33.noarch 109/134 Verifying : python3-dnf-4.5.2-1.fc34.noarch 110/134 Verifying : python3-dnf-plugins-core-4.0.18-1.fc34.noarch 111/134 Verifying : python3-gpg-1.15.1-1.fc34.x86_64 112/134 Verifying : python3-hawkey-0.55.2-1.fc34.x86_64 113/134 Verifying : python3-libcomps-0.1.15-5.fc33.x86_64 114/134 Verifying : python3-libdnf-0.55.2-1.fc34.x86_64 115/134 Verifying : python3-libs-3.9.1-4.fc34.x86_64 116/134 Verifying : python3-rpm-4.16.1.2-4.fc34.x86_64 117/134 Verifying : python3-setuptools-52.0.0-1.fc34.noarch 118/134 Verifying : python3-six-1.15.0-3.fc34.noarch 119/134 Verifying : readline-8.1-1.fc34.x86_64 120/134 Verifying : rpm-4.16.1.2-4.fc34.x86_64 121/134 Verifying : rpm-build-libs-4.16.1.2-4.fc34.x86_64 122/134 Verifying : rpm-libs-4.16.1.2-4.fc34.x86_64 123/134 Verifying : rpm-sign-libs-4.16.1.2-4.fc34.x86_64 124/134 Verifying : sed-4.8-6.fc34.x86_64 125/134 Verifying : setup-2.13.7-2.fc33.noarch 126/134 Verifying : shadow-utils-2:4.8.1-6.fc34.x86_64 127/134 Verifying : sqlite-libs-3.34.1-1.fc34.x86_64 128/134 Verifying : systemd-libs-247.2-1.fc34.x86_64 129/134 Verifying : tpm2-tss-3.0.3-1.fc34.x86_64 130/134 Verifying : tzdata-2021a-1.fc34.noarch 131/134 Verifying : xz-libs-5.2.5-4.fc34.x86_64 132/134 Verifying : zchunk-libs-1.1.9-1.fc34.x86_64 133/134 Verifying : zlib-1.2.11-23.fc34.x86_64 134/134 Installed: alternatives-1.15-1.fc34.x86_64 audit-libs-3.0-1.fc34.x86_64 basesystem-11-10.fc33.noarch bash-5.1.0-1.fc34.x86_64 bzip2-libs-1.0.8-4.fc33.x86_64 ca-certificates-2020.2.41-6.fc34.noarch coreutils-8.32-15.fc34.x86_64 coreutils-common-8.32-15.fc34.x86_64 crypto-policies-20210127-2.gitb21c811.fc34.noarch curl-7.74.0-4.fc34.x86_64 cyrus-sasl-lib-2.1.27-6.fc33.x86_64 dnf-4.5.2-1.fc34.noarch dnf-data-4.5.2-1.fc34.noarch dnf-plugins-core-4.0.18-1.fc34.noarch elfutils-default-yama-scope-0.182-2.fc34.noarch elfutils-libelf-0.182-2.fc34.x86_64 elfutils-libs-0.182-2.fc34.x86_64 expat-2.2.10-1.fc34.x86_64 fedora-gpg-keys-34-0.8.noarch fedora-release-34-0.10.noarch fedora-release-common-34-0.10.noarch fedora-release-identity-basic-34-0.10.noarch fedora-repos-34-0.8.noarch fedora-repos-rawhide-34-0.8.noarch file-libs-5.39-4.fc34.x86_64 filesystem-3.14-4.fc34.x86_64 gawk-5.1.0-2.fc33.x86_64 gdbm-libs-1:1.19-1.fc34.x86_64 glib2-2.67.1-3.fc34.x86_64 glibc-2.32.9000-26.fc34.x86_64 glibc-common-2.32.9000-26.fc34.x86_64 glibc-minimal-langpack-2.32.9000-26.fc34.x86_64 gmp-1:6.2.0-5.fc34.x86_64 gnupg2-2.2.27-1.fc34.x86_64 gnutls-3.6.15-2.fc34.x86_64 gpgme-1.15.1-1.fc34.x86_64 grep-3.6-1.fc34.x86_64 ima-evm-utils-1.3.2-1.fc34.x86_64 json-c-0.14-7.fc33.x86_64 keyutils-libs-1.6.1-1.fc34.x86_64 krb5-libs-1.19-0.beta2.1.fc34.2.x86_64 libacl-2.2.53-9.fc34.x86_64 libarchive-3.5.1-1.fc34.x86_64 libassuan-2.5.4-1.fc34.x86_64 libattr-2.4.48-10.fc33.x86_64 libblkid-2.36.1-4.fc34.x86_64 libbrotli-1.0.9-3.fc34.x86_64 libcap-2.46-1.fc34.x86_64 libcap-ng-0.8.2-1.fc34.x86_64 libcom_err-1.45.6-4.fc33.x86_64 libcomps-0.1.15-5.fc33.x86_64 libcurl-7.74.0-4.fc34.x86_64 libdb-5.3.28-45.fc34.x86_64 libdnf-0.55.2-1.fc34.x86_64 libffi-3.1-27.fc34.x86_64 libgcc-11.0.0-0.17.fc34.x86_64 libgcrypt-1.9.0-1.fc34.x86_64 libgomp-11.0.0-0.17.fc34.x86_64 libgpg-error-1.41-1.fc34.x86_64 libidn2-2.3.0-4.fc34.x86_64 libksba-1.5.0-1.fc34.x86_64 libmetalink-0.1.3-13.fc33.x86_64 libmodulemd-2.12.0-1.fc34.x86_64 libmount-2.36.1-4.fc34.x86_64 libnghttp2-1.42.0-1.fc34.x86_64 libnsl2-1.3.0-1.fc34.x86_64 libpsl-0.21.1-2.fc33.x86_64 librepo-1.12.1-1.fc34.x86_64 libreport-filesystem-2.14.0-15.fc34.noarch libselinux-3.2-0.rc1.1.fc34.x86_64 libsemanage-3.2-0.rc1.1.fc34.x86_64 libsepol-3.2-0.rc1.1.fc34.x86_64 libsigsegv-2.13-1.fc34.x86_64 libsmartcols-2.36.1-4.fc34.x86_64 libsolv-0.7.17-2.fc34.x86_64 libssh-0.9.5-1.fc34.x86_64 libssh-config-0.9.5-1.fc34.noarch libstdc++-11.0.0-0.17.fc34.x86_64 libtasn1-4.16.0-3.fc33.x86_64 libtirpc-1.3.1-0.fc34.x86_64 libunistring-0.9.10-9.fc33.x86_64 libusbx-1.0.23-2.fc33.x86_64 libuuid-2.36.1-4.fc34.x86_64 libverto-0.3.1-2.fc34.x86_64 libxcrypt-4.4.17-1.fc34.x86_64 libxml2-2.9.10-9.fc34.x86_64 libyaml-0.2.5-4.fc34.x86_64 libzstd-1.4.7-1.fc34.x86_64 lua-libs-5.4.2-1.fc34.x86_64 lz4-libs-1.9.3-1.fc34.x86_64 mpfr-4.1.0-2.fc33.x86_64 ncurses-base-6.2-3.20200222.fc33.noarch ncurses-libs-6.2-3.20200222.fc33.x86_64 nettle-3.7-1.fc34.x86_64 npth-1.6-5.fc33.x86_64 openldap-2.4.57-1.fc34.x86_64 openssl-libs-1:1.1.1i-1.fc34.x86_64 p11-kit-0.23.22-3.fc34.x86_64 p11-kit-trust-0.23.22-3.fc34.x86_64 pcre-8.44-3.fc34.x86_64 pcre2-10.36-2.fc34.x86_64 pcre2-syntax-10.36-2.fc34.noarch popt-1.18-2.fc34.x86_64 publicsuffix-list-dafsa-20190417-4.fc33.noarch python-pip-wheel-21.0-1.fc34.noarch python-setuptools-wheel-52.0.0-1.fc34.noarch python3-3.9.1-4.fc34.x86_64 python3-dateutil-1:2.8.1-2.fc33.noarch python3-distro-1.5.0-4.fc33.noarch python3-dnf-4.5.2-1.fc34.noarch python3-dnf-plugins-core-4.0.18-1.fc34.noarch python3-gpg-1.15.1-1.fc34.x86_64 python3-hawkey-0.55.2-1.fc34.x86_64 python3-libcomps-0.1.15-5.fc33.x86_64 python3-libdnf-0.55.2-1.fc34.x86_64 python3-libs-3.9.1-4.fc34.x86_64 python3-rpm-4.16.1.2-4.fc34.x86_64 python3-setuptools-52.0.0-1.fc34.noarch python3-six-1.15.0-3.fc34.noarch readline-8.1-1.fc34.x86_64 rpm-4.16.1.2-4.fc34.x86_64 rpm-build-libs-4.16.1.2-4.fc34.x86_64 rpm-libs-4.16.1.2-4.fc34.x86_64 rpm-sign-libs-4.16.1.2-4.fc34.x86_64 sed-4.8-6.fc34.x86_64 setup-2.13.7-2.fc33.noarch shadow-utils-2:4.8.1-6.fc34.x86_64 sqlite-libs-3.34.1-1.fc34.x86_64 systemd-libs-247.2-1.fc34.x86_64 tpm2-tss-3.0.3-1.fc34.x86_64 tzdata-2021a-1.fc34.noarch xz-libs-5.2.5-4.fc34.x86_64 zchunk-libs-1.1.9-1.fc34.x86_64 zlib-1.2.11-23.fc34.x86_64 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1611922105.980445/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.9 INFO: Mock Version: 2.9 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk Copr repository 176 kB/s | 3.6 kB 00:00 Copr repository 17 MB/s | 804 kB 00:00 fedora 38 kB/s | 8.1 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: [1mbash [m x86_64 5.1.0-1.fc34 fedora 1.7 M [1mbzip2 [m x86_64 1.0.8-4.fc33 fedora 52 k [1mcoreutils [m x86_64 8.32-15.fc34 fedora 1.1 M [1mcpio [m x86_64 2.13-8.fc33 fedora 273 k [1mdiffutils [m x86_64 3.7-7.fc34 fedora 390 k [1mfedora-release-common [m noarch 34-0.10 fedora 20 k [1mfindutils [m x86_64 1:4.8.0-1.fc34 fedora 545 k [1mgawk [m x86_64 5.1.0-2.fc33 fedora 1.0 M [1mglibc-minimal-langpack [m x86_64 2.32.9000-26.fc34 fedora 110 k [1mgrep [m x86_64 3.6-1.fc34 fedora 260 k [1mgzip [m x86_64 1.10-3.fc33 fedora 152 k [1minfo [m x86_64 6.7-8.fc33 fedora 228 k [1mmake [m x86_64 1:4.3-2.fc33 fedora 539 k [1mpatch [m x86_64 2.7.6-13.fc33 fedora 129 k [1mredhat-rpm-config [m noarch 180-1.fc34 fedora 71 k [1mrpm-build [m x86_64 4.16.1.2-4.fc34 fedora 107 k [1msed [m x86_64 4.8-6.fc34 fedora 298 k [1mshadow-utils [m x86_64 2:4.8.1-6.fc34 fedora 1.2 M [1mtar [m x86_64 2:1.33-2.fc34 fedora 895 k [1munzip [m x86_64 6.0-49.fc33 fedora 181 k [1mutil-linux [m x86_64 2.36.1-4.fc34 fedora 2.5 M [1mwhich [m x86_64 2.21-20.fc33 fedora 41 k [1mxz [m x86_64 5.2.5-4.fc34 fedora 215 k Installing dependencies: [1malternatives [m x86_64 1.15-1.fc34 fedora 35 k [1maudit-libs [m x86_64 3.0-1.fc34 fedora 113 k [1mbasesystem [m noarch 11-10.fc33 fedora 6.8 k [1mbinutils [m x86_64 2.35.1-25.fc34 fedora 5.3 M [1mbinutils-gold [m x86_64 2.35.1-25.fc34 fedora 747 k [1mbzip2-libs [m x86_64 1.0.8-4.fc33 fedora 40 k [1mca-certificates [m noarch 2020.2.41-6.fc34 fedora 353 k [1mcoreutils-common [m x86_64 8.32-15.fc34 fedora 2.0 M [1mcracklib [m x86_64 2.9.6-24.fc33 fedora 83 k [1mcrypto-policies [m noarch 20210127-2.gitb21c811.fc34 fedora 57 k [1mcurl [m x86_64 7.74.0-4.fc34 fedora 299 k [1mcyrus-sasl-lib [m x86_64 2.1.27-6.fc33 fedora 101 k [1mdwz [m x86_64 0.13-7.fc34 fedora 126 k [1med [m x86_64 1.14.2-9.fc33 fedora 75 k [1mefi-srpm-macros [m noarch 4-5.fc33 fedora 21 k [1melfutils [m x86_64 0.182-2.fc34 fedora 525 k [1melfutils-debuginfod-client [m x86_64 0.182-2.fc34 fedora 32 k [1melfutils-default-yama-scope [m noarch 0.182-2.fc34 fedora 16 k [1melfutils-libelf [m x86_64 0.182-2.fc34 fedora 193 k [1melfutils-libs [m x86_64 0.182-2.fc34 fedora 265 k [1mexpat [m x86_64 2.2.10-1.fc34 fedora 104 k [1mfedora-gpg-keys [m noarch 34-0.8 fedora 107 k [1mfedora-release [m noarch 34-0.10 fedora 11 k [1mfedora-release-identity-basic[m noarch 34-0.10 fedora 12 k [1mfedora-repos [m noarch 34-0.8 fedora 11 k [1mfedora-repos-rawhide [m noarch 34-0.8 fedora 10 k [1mfile [m x86_64 5.39-4.fc34 fedora 51 k [1mfile-libs [m x86_64 5.39-4.fc34 fedora 591 k [1mfilesystem [m x86_64 3.14-4.fc34 fedora 1.1 M [1mfonts-srpm-macros [m noarch 1:2.0.5-4.fc33 fedora 27 k [1mfpc-srpm-macros [m noarch 1.3-2.fc33 fedora 7.6 k [1mgc [m x86_64 8.0.4-4.fc33 fedora 104 k [1mgdb-minimal [m x86_64 10.1-2.fc34 fedora 3.6 M [1mghc-srpm-macros [m noarch 1.5.0-3.fc33 fedora 7.7 k [1mglibc [m x86_64 2.32.9000-26.fc34 fedora 3.5 M [1mglibc-common [m x86_64 2.32.9000-26.fc34 fedora 2.1 M [1mgmp [m x86_64 1:6.2.0-5.fc34 fedora 320 k [1mgnat-srpm-macros [m noarch 4-12.fc33 fedora 8.2 k [1mgo-srpm-macros [m noarch 3.0.9-1.fc34 fedora 25 k [1mguile22 [m x86_64 2.2.7-1.fc34 fedora 6.5 M [1mkernel-srpm-macros [m noarch 1.0-3.fc33 fedora 7.2 k [1mkeyutils-libs [m x86_64 1.6.1-1.fc34 fedora 31 k [1mkrb5-libs [m x86_64 1.19-0.beta2.1.fc34.2 fedora 734 k [1mlibacl [m x86_64 2.2.53-9.fc34 fedora 23 k [1mlibarchive [m x86_64 3.5.1-1.fc34 fedora 391 k [1mlibattr [m x86_64 2.4.48-10.fc33 fedora 18 k [1mlibblkid [m x86_64 2.36.1-4.fc34 fedora 100 k [1mlibbrotli [m x86_64 1.0.9-3.fc34 fedora 322 k [1mlibcap [m x86_64 2.46-1.fc34 fedora 65 k [1mlibcap-ng [m x86_64 0.8.2-1.fc34 fedora 32 k [1mlibcom_err [m x86_64 1.45.6-4.fc33 fedora 27 k [1mlibcurl [m x86_64 7.74.0-4.fc34 fedora 285 k [1mlibdb [m x86_64 5.3.28-45.fc34 fedora 760 k [1mlibeconf [m x86_64 0.3.8-4.fc33 fedora 24 k [1mlibfdisk [m x86_64 2.36.1-4.fc34 fedora 151 k [1mlibffi [m x86_64 3.1-27.fc34 fedora 33 k [1mlibgcc [m x86_64 11.0.0-0.17.fc34 fedora 91 k [1mlibgcrypt [m x86_64 1.9.0-1.fc34 fedora 511 k [1mlibgomp [m x86_64 11.0.0-0.17.fc34 fedora 262 k [1mlibgpg-error [m x86_64 1.41-1.fc34 fedora 212 k [1mlibidn2 [m x86_64 2.3.0-4.fc34 fedora 104 k [1mlibmetalink [m x86_64 0.1.3-13.fc33 fedora 31 k [1mlibmount [m x86_64 2.36.1-4.fc34 fedora 130 k [1mlibnghttp2 [m x86_64 1.42.0-1.fc34 fedora 76 k [1mlibnsl2 [m x86_64 1.3.0-1.fc34 fedora 58 k [1mlibpkgconf [m x86_64 1.7.3-5.fc34 fedora 36 k [1mlibpsl [m x86_64 0.21.1-2.fc33 fedora 61 k [1mlibpwquality [m x86_64 1.4.4-2.fc34 fedora 104 k [1mlibselinux [m x86_64 3.2-0.rc1.1.fc34 fedora 84 k [1mlibsemanage [m x86_64 3.2-0.rc1.1.fc34 fedora 116 k [1mlibsepol [m x86_64 3.2-0.rc1.1.fc34 fedora 286 k [1mlibsigsegv [m x86_64 2.13-1.fc34 fedora 27 k [1mlibsmartcols [m x86_64 2.36.1-4.fc34 fedora 59 k [1mlibssh [m x86_64 0.9.5-1.fc34 fedora 209 k [1mlibssh-config [m noarch 0.9.5-1.fc34 fedora 11 k [1mlibstdc++ [m x86_64 11.0.0-0.17.fc34 fedora 693 k [1mlibtasn1 [m x86_64 4.16.0-3.fc33 fedora 75 k [1mlibtirpc [m x86_64 1.3.1-0.fc34 fedora 95 k [1mlibtool-ltdl [m x86_64 2.4.6-38.fc34 fedora 36 k [1mlibunistring [m x86_64 0.9.10-9.fc33 fedora 516 k [1mlibutempter [m x86_64 1.2.1-3.fc34 fedora 26 k [1mlibuuid [m x86_64 2.36.1-4.fc34 fedora 25 k [1mlibverto [m x86_64 0.3.1-2.fc34 fedora 21 k [1mlibxcrypt [m x86_64 4.4.17-1.fc34 fedora 121 k [1mlibxml2 [m x86_64 2.9.10-9.fc34 fedora 744 k [1mlibzstd [m x86_64 1.4.7-1.fc34 fedora 340 k [1mlua-libs [m x86_64 5.4.2-1.fc34 fedora 216 k [1mlua-srpm-macros [m noarch 1-3.fc34 fedora 8.1 k [1mlz4-libs [m x86_64 1.9.3-1.fc34 fedora 67 k [1mmpfr [m x86_64 4.1.0-2.fc33 fedora 1.4 M [1mncurses-base [m noarch 6.2-3.20200222.fc33 fedora 60 k [1mncurses-libs [m x86_64 6.2-3.20200222.fc33 fedora 329 k [1mnim-srpm-macros [m noarch 3-3.fc33 fedora 8.3 k [1mocaml-srpm-macros [m noarch 6-3.fc33 fedora 7.7 k [1mopenblas-srpm-macros [m noarch 2-8.fc33 fedora 7.2 k [1mopenldap [m x86_64 2.4.57-1.fc34 fedora 261 k [1mopenssl-libs [m x86_64 1:1.1.1i-1.fc34 fedora 1.4 M [1mp11-kit [m x86_64 0.23.22-3.fc34 fedora 369 k [1mp11-kit-trust [m x86_64 0.23.22-3.fc34 fedora 141 k [1mpam [m x86_64 1.5.1-2.fc34 fedora 545 k [1mpcre [m x86_64 8.44-3.fc34 fedora 200 k [1mpcre2 [m x86_64 10.36-2.fc34 fedora 234 k [1mpcre2-syntax [m noarch 10.36-2.fc34 fedora 143 k [1mperl-srpm-macros [m noarch 1-38.fc33 fedora 8.3 k [1mpkgconf [m x86_64 1.7.3-5.fc34 fedora 41 k [1mpkgconf-m4 [m noarch 1.7.3-5.fc34 fedora 14 k [1mpkgconf-pkg-config [m x86_64 1.7.3-5.fc34 fedora 10 k [1mpopt [m x86_64 1.18-2.fc34 fedora 59 k [1mpublicsuffix-list-dafsa [m noarch 20190417-4.fc33 fedora 55 k [1mpython-srpm-macros [m noarch 3.9-11.fc34 fedora 20 k [1mqt5-srpm-macros [m noarch 5.15.2-1.fc34 fedora 8.4 k [1mreadline [m x86_64 8.1-1.fc34 fedora 216 k [1mrpm [m x86_64 4.16.1.2-4.fc34 fedora 527 k [1mrpm-build-libs [m x86_64 4.16.1.2-4.fc34 fedora 97 k [1mrpm-libs [m x86_64 4.16.1.2-4.fc34 fedora 326 k [1mrust-srpm-macros [m noarch 17-1.fc34 fedora 9.8 k [1msetup [m noarch 2.13.7-2.fc33 fedora 142 k [1msqlite-libs [m x86_64 3.34.1-1.fc34 fedora 626 k [1msystemd-libs [m x86_64 247.2-1.fc34 fedora 546 k [1mtzdata [m noarch 2021a-1.fc34 fedora 432 k [1mxxhash-libs [m x86_64 0.8.0-1.fc33 fedora 41 k [1mxz-libs [m x86_64 5.2.5-4.fc34 fedora 91 k [1mzip [m x86_64 3.0-27.fc33 fedora 258 k [1mzlib [m x86_64 1.2.11-23.fc34 fedora 92 k [1mzstd [m x86_64 1.4.7-1.fc34 fedora 568 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 148 Packages Total size: 58 M Installed size: 224 M Downloading Packages: [SKIPPED] alternatives-1.15-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] audit-libs-3.0-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-10.fc33.noarch.rpm: Already downloaded [SKIPPED] bash-5.1.0-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] binutils-2.35.1-25.fc34.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.35.1-25.fc34.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] ca-certificates-2020.2.41-6.fc34.noarch.rpm: Already downloaded [SKIPPED] coreutils-8.32-15.fc34.x86_64.rpm: Already downloaded [SKIPPED] coreutils-common-8.32-15.fc34.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.13-8.fc33.x86_64.rpm: Already downloaded [SKIPPED] cracklib-2.9.6-24.fc33.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-20210127-2.gitb21c811.fc34.noarch.rpm: Already downloaded [SKIPPED] curl-7.74.0-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.27-6.fc33.x86_64.rpm: Already downloaded [SKIPPED] diffutils-3.7-7.fc34.x86_64.rpm: Already downloaded [SKIPPED] dwz-0.13-7.fc34.x86_64.rpm: Already downloaded [SKIPPED] ed-1.14.2-9.fc33.x86_64.rpm: Already downloaded [SKIPPED] efi-srpm-macros-4-5.fc33.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.182-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.182-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.182-2.fc34.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.182-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] elfutils-libs-0.182-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] expat-2.2.10-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-34-0.8.noarch.rpm: Already downloaded [SKIPPED] fedora-release-34-0.10.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-34-0.10.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-34-0.10.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-34-0.8.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-rawhide-34-0.8.noarch.rpm: Already downloaded [SKIPPED] file-5.39-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] file-libs-5.39-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] filesystem-3.14-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] findutils-4.8.0-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-2.0.5-4.fc33.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-2.fc33.noarch.rpm: Already downloaded [SKIPPED] gawk-5.1.0-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] gc-8.0.4-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] gdb-minimal-10.1-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.5.0-3.fc33.noarch.rpm: Already downloaded [SKIPPED] glibc-2.32.9000-26.fc34.x86_64.rpm: Already downloaded [SKIPPED] glibc-common-2.32.9000-26.fc34.x86_64.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.32.9000-26.fc34.x86_64.rpm: Already downloaded [SKIPPED] gmp-6.2.0-5.fc34.x86_64.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-4-12.fc33.noarch.rpm: Already downloaded [SKIPPED] go-srpm-macros-3.0.9-1.fc34.noarch.rpm: Already downloaded [SKIPPED] grep-3.6-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] guile22-2.2.7-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] gzip-1.10-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] info-6.7-8.fc33.x86_64.rpm: Already downloaded [SKIPPED] kernel-srpm-macros-1.0-3.fc33.noarch.rpm: Already downloaded [SKIPPED] keyutils-libs-1.6.1-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] krb5-libs-1.19-0.beta2.1.fc34.2.x86_64.rpm: Already downloaded [SKIPPED] libacl-2.2.53-9.fc34.x86_64.rpm: Already downloaded [SKIPPED] libarchive-3.5.1-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libattr-2.4.48-10.fc33.x86_64.rpm: Already downloaded [SKIPPED] libblkid-2.36.1-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] libbrotli-1.0.9-3.fc34.x86_64.rpm: Already downloaded [SKIPPED] libcap-2.46-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.2-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libcom_err-1.45.6-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] libcurl-7.74.0-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] libdb-5.3.28-45.fc34.x86_64.rpm: Already downloaded [SKIPPED] libeconf-0.3.8-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] libfdisk-2.36.1-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] libffi-3.1-27.fc34.x86_64.rpm: Already downloaded [SKIPPED] libgcc-11.0.0-0.17.fc34.x86_64.rpm: Already downloaded [SKIPPED] libgcrypt-1.9.0-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libgomp-11.0.0-0.17.fc34.x86_64.rpm: Already downloaded [SKIPPED] libgpg-error-1.41-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libidn2-2.3.0-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] libmetalink-0.1.3-13.fc33.x86_64.rpm: Already downloaded [SKIPPED] libmount-2.36.1-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] libnghttp2-1.42.0-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libnsl2-1.3.0-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libpkgconf-1.7.3-5.fc34.x86_64.rpm: Already downloaded [SKIPPED] libpsl-0.21.1-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] libpwquality-1.4.4-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] libselinux-3.2-0.rc1.1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libsemanage-3.2-0.rc1.1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libsepol-3.2-0.rc1.1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libsigsegv-2.13-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libsmartcols-2.36.1-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] libssh-0.9.5-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libssh-config-0.9.5-1.fc34.noarch.rpm: Already downloaded [SKIPPED] libstdc++-11.0.0-0.17.fc34.x86_64.rpm: Already downloaded [SKIPPED] libtasn1-4.16.0-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] libtirpc-1.3.1-0.fc34.x86_64.rpm: Already downloaded [SKIPPED] libtool-ltdl-2.4.6-38.fc34.x86_64.rpm: Already downloaded [SKIPPED] libunistring-0.9.10-9.fc33.x86_64.rpm: Already downloaded [SKIPPED] libutempter-1.2.1-3.fc34.x86_64.rpm: Already downloaded [SKIPPED] libuuid-2.36.1-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] libverto-0.3.1-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] libxcrypt-4.4.17-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] libxml2-2.9.10-9.fc34.x86_64.rpm: Already downloaded [SKIPPED] libzstd-1.4.7-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] lua-libs-5.4.2-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] lua-srpm-macros-1-3.fc34.noarch.rpm: Already downloaded [SKIPPED] lz4-libs-1.9.3-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] make-4.3-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] mpfr-4.1.0-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] ncurses-base-6.2-3.20200222.fc33.noarch.rpm: Already downloaded [SKIPPED] ncurses-libs-6.2-3.20200222.fc33.x86_64.rpm: Already downloaded [SKIPPED] nim-srpm-macros-3-3.fc33.noarch.rpm: Already downloaded [SKIPPED] ocaml-srpm-macros-6-3.fc33.noarch.rpm: Already downloaded [SKIPPED] openblas-srpm-macros-2-8.fc33.noarch.rpm: Already downloaded [SKIPPED] openldap-2.4.57-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] openssl-libs-1.1.1i-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] p11-kit-0.23.22-3.fc34.x86_64.rpm: Already downloaded [SKIPPED] p11-kit-trust-0.23.22-3.fc34.x86_64.rpm: Already downloaded [SKIPPED] pam-1.5.1-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] patch-2.7.6-13.fc33.x86_64.rpm: Already downloaded [SKIPPED] pcre-8.44-3.fc34.x86_64.rpm: Already downloaded [SKIPPED] pcre2-10.36-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] pcre2-syntax-10.36-2.fc34.noarch.rpm: Already downloaded [SKIPPED] perl-srpm-macros-1-38.fc33.noarch.rpm: Already downloaded [SKIPPED] pkgconf-1.7.3-5.fc34.x86_64.rpm: Already downloaded [SKIPPED] pkgconf-m4-1.7.3-5.fc34.noarch.rpm: Already downloaded [SKIPPED] pkgconf-pkg-config-1.7.3-5.fc34.x86_64.rpm: Already downloaded [SKIPPED] popt-1.18-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] publicsuffix-list-dafsa-20190417-4.fc33.noarch.rpm: Already downloaded [SKIPPED] python-srpm-macros-3.9-11.fc34.noarch.rpm: Already downloaded [SKIPPED] qt5-srpm-macros-5.15.2-1.fc34.noarch.rpm: Already downloaded [SKIPPED] readline-8.1-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] redhat-rpm-config-180-1.fc34.noarch.rpm: Already downloaded [SKIPPED] rpm-4.16.1.2-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-4.16.1.2-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.16.1.2-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] rpm-libs-4.16.1.2-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] rust-srpm-macros-17-1.fc34.noarch.rpm: Already downloaded [SKIPPED] sed-4.8-6.fc34.x86_64.rpm: Already downloaded [SKIPPED] setup-2.13.7-2.fc33.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.8.1-6.fc34.x86_64.rpm: Already downloaded [SKIPPED] sqlite-libs-3.34.1-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] systemd-libs-247.2-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] tar-1.33-2.fc34.x86_64.rpm: Already downloaded [SKIPPED] tzdata-2021a-1.fc34.noarch.rpm: Already downloaded [SKIPPED] unzip-6.0-49.fc33.x86_64.rpm: Already downloaded [SKIPPED] util-linux-2.36.1-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] which-2.21-20.fc33.x86_64.rpm: Already downloaded [SKIPPED] xxhash-libs-0.8.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] xz-5.2.5-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] xz-libs-5.2.5-4.fc34.x86_64.rpm: Already downloaded [SKIPPED] zip-3.0-27.fc33.x86_64.rpm: Already downloaded [SKIPPED] zlib-1.2.11-23.fc34.x86_64.rpm: Already downloaded [SKIPPED] zstd-1.4.7-1.fc34.x86_64.rpm: Already downloaded warning: /var/lib/mock/fedora-rawhide-x86_64-1611922105.980445/root/var/cache/dnf/fedora-2d95c80a1fa0a67d/packages/alternatives-1.15-1.fc34.x86_64.rpm: Header V4 RSA/SHA256 Signature, key ID 45719a39: NOKEY fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x45719A39: Userid : "Fedora (34) " Fingerprint: 8C5B A699 0BDB 26E1 9F2A 1A80 1161 AE69 4571 9A39 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-34-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-34-primary (0x45719A39) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x9570FF31: Userid : "Fedora (33) " Fingerprint: 963A 2BEB 0200 9608 FE67 EA42 49FD 7749 9570 FF31 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-33-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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Verifying : libbrotli-1.0.9-3.fc34.x86_64 60/148 Verifying : libcap-2.46-1.fc34.x86_64 61/148 Verifying : libcap-ng-0.8.2-1.fc34.x86_64 62/148 Verifying : libcom_err-1.45.6-4.fc33.x86_64 63/148 Verifying : libcurl-7.74.0-4.fc34.x86_64 64/148 Verifying : libdb-5.3.28-45.fc34.x86_64 65/148 Verifying : libeconf-0.3.8-4.fc33.x86_64 66/148 Verifying : libfdisk-2.36.1-4.fc34.x86_64 67/148 Verifying : libffi-3.1-27.fc34.x86_64 68/148 Verifying : libgcc-11.0.0-0.17.fc34.x86_64 69/148 Verifying : libgcrypt-1.9.0-1.fc34.x86_64 70/148 Verifying : libgomp-11.0.0-0.17.fc34.x86_64 71/148 Verifying : libgpg-error-1.41-1.fc34.x86_64 72/148 Verifying : libidn2-2.3.0-4.fc34.x86_64 73/148 Verifying : libmetalink-0.1.3-13.fc33.x86_64 74/148 Verifying : libmount-2.36.1-4.fc34.x86_64 75/148 Verifying : libnghttp2-1.42.0-1.fc34.x86_64 76/148 Verifying : libnsl2-1.3.0-1.fc34.x86_64 77/148 Verifying : libpkgconf-1.7.3-5.fc34.x86_64 78/148 Verifying : libpsl-0.21.1-2.fc33.x86_64 79/148 Verifying : libpwquality-1.4.4-2.fc34.x86_64 80/148 Verifying : libselinux-3.2-0.rc1.1.fc34.x86_64 81/148 Verifying : libsemanage-3.2-0.rc1.1.fc34.x86_64 82/148 Verifying : libsepol-3.2-0.rc1.1.fc34.x86_64 83/148 Verifying : libsigsegv-2.13-1.fc34.x86_64 84/148 Verifying : libsmartcols-2.36.1-4.fc34.x86_64 85/148 Verifying : libssh-0.9.5-1.fc34.x86_64 86/148 Verifying : libssh-config-0.9.5-1.fc34.noarch 87/148 Verifying : libstdc++-11.0.0-0.17.fc34.x86_64 88/148 Verifying : libtasn1-4.16.0-3.fc33.x86_64 89/148 Verifying : libtirpc-1.3.1-0.fc34.x86_64 90/148 Verifying : libtool-ltdl-2.4.6-38.fc34.x86_64 91/148 Verifying : libunistring-0.9.10-9.fc33.x86_64 92/148 Verifying : libutempter-1.2.1-3.fc34.x86_64 93/148 Verifying : libuuid-2.36.1-4.fc34.x86_64 94/148 Verifying : libverto-0.3.1-2.fc34.x86_64 95/148 Verifying : libxcrypt-4.4.17-1.fc34.x86_64 96/148 Verifying : libxml2-2.9.10-9.fc34.x86_64 97/148 Verifying : libzstd-1.4.7-1.fc34.x86_64 98/148 Verifying : lua-libs-5.4.2-1.fc34.x86_64 99/148 Verifying : lua-srpm-macros-1-3.fc34.noarch 100/148 Verifying : lz4-libs-1.9.3-1.fc34.x86_64 101/148 Verifying : make-1:4.3-2.fc33.x86_64 102/148 Verifying : mpfr-4.1.0-2.fc33.x86_64 103/148 Verifying : ncurses-base-6.2-3.20200222.fc33.noarch 104/148 Verifying : ncurses-libs-6.2-3.20200222.fc33.x86_64 105/148 Verifying : nim-srpm-macros-3-3.fc33.noarch 106/148 Verifying : ocaml-srpm-macros-6-3.fc33.noarch 107/148 Verifying : openblas-srpm-macros-2-8.fc33.noarch 108/148 Verifying : openldap-2.4.57-1.fc34.x86_64 109/148 Verifying : openssl-libs-1:1.1.1i-1.fc34.x86_64 110/148 Verifying : p11-kit-0.23.22-3.fc34.x86_64 111/148 Verifying : p11-kit-trust-0.23.22-3.fc34.x86_64 112/148 Verifying : pam-1.5.1-2.fc34.x86_64 113/148 Verifying : patch-2.7.6-13.fc33.x86_64 114/148 Verifying : pcre-8.44-3.fc34.x86_64 115/148 Verifying : pcre2-10.36-2.fc34.x86_64 116/148 Verifying : pcre2-syntax-10.36-2.fc34.noarch 117/148 Verifying : perl-srpm-macros-1-38.fc33.noarch 118/148 Verifying : pkgconf-1.7.3-5.fc34.x86_64 119/148 Verifying : pkgconf-m4-1.7.3-5.fc34.noarch 120/148 Verifying : pkgconf-pkg-config-1.7.3-5.fc34.x86_64 121/148 Verifying : popt-1.18-2.fc34.x86_64 122/148 Verifying : publicsuffix-list-dafsa-20190417-4.fc33.noarch 123/148 Verifying : python-srpm-macros-3.9-11.fc34.noarch 124/148 Verifying : qt5-srpm-macros-5.15.2-1.fc34.noarch 125/148 Verifying : readline-8.1-1.fc34.x86_64 126/148 Verifying : redhat-rpm-config-180-1.fc34.noarch 127/148 Verifying : rpm-4.16.1.2-4.fc34.x86_64 128/148 Verifying : rpm-build-4.16.1.2-4.fc34.x86_64 129/148 Verifying : rpm-build-libs-4.16.1.2-4.fc34.x86_64 130/148 Verifying : rpm-libs-4.16.1.2-4.fc34.x86_64 131/148 Verifying : rust-srpm-macros-17-1.fc34.noarch 132/148 Verifying : sed-4.8-6.fc34.x86_64 133/148 Verifying : setup-2.13.7-2.fc33.noarch 134/148 Verifying : shadow-utils-2:4.8.1-6.fc34.x86_64 135/148 Verifying : sqlite-libs-3.34.1-1.fc34.x86_64 136/148 Verifying : systemd-libs-247.2-1.fc34.x86_64 137/148 Verifying : tar-2:1.33-2.fc34.x86_64 138/148 Verifying : tzdata-2021a-1.fc34.noarch 139/148 Verifying : unzip-6.0-49.fc33.x86_64 140/148 Verifying : util-linux-2.36.1-4.fc34.x86_64 141/148 Verifying : which-2.21-20.fc33.x86_64 142/148 Verifying : xxhash-libs-0.8.0-1.fc33.x86_64 143/148 Verifying : xz-5.2.5-4.fc34.x86_64 144/148 Verifying : xz-libs-5.2.5-4.fc34.x86_64 145/148 Verifying : zip-3.0-27.fc33.x86_64 146/148 Verifying : zlib-1.2.11-23.fc34.x86_64 147/148 Verifying : zstd-1.4.7-1.fc34.x86_64 148/148 Installed: alternatives-1.15-1.fc34.x86_64 audit-libs-3.0-1.fc34.x86_64 basesystem-11-10.fc33.noarch bash-5.1.0-1.fc34.x86_64 binutils-2.35.1-25.fc34.x86_64 binutils-gold-2.35.1-25.fc34.x86_64 bzip2-1.0.8-4.fc33.x86_64 bzip2-libs-1.0.8-4.fc33.x86_64 ca-certificates-2020.2.41-6.fc34.noarch coreutils-8.32-15.fc34.x86_64 coreutils-common-8.32-15.fc34.x86_64 cpio-2.13-8.fc33.x86_64 cracklib-2.9.6-24.fc33.x86_64 crypto-policies-20210127-2.gitb21c811.fc34.noarch curl-7.74.0-4.fc34.x86_64 cyrus-sasl-lib-2.1.27-6.fc33.x86_64 diffutils-3.7-7.fc34.x86_64 dwz-0.13-7.fc34.x86_64 ed-1.14.2-9.fc33.x86_64 efi-srpm-macros-4-5.fc33.noarch elfutils-0.182-2.fc34.x86_64 elfutils-debuginfod-client-0.182-2.fc34.x86_64 elfutils-default-yama-scope-0.182-2.fc34.noarch elfutils-libelf-0.182-2.fc34.x86_64 elfutils-libs-0.182-2.fc34.x86_64 expat-2.2.10-1.fc34.x86_64 fedora-gpg-keys-34-0.8.noarch fedora-release-34-0.10.noarch fedora-release-common-34-0.10.noarch fedora-release-identity-basic-34-0.10.noarch fedora-repos-34-0.8.noarch fedora-repos-rawhide-34-0.8.noarch file-5.39-4.fc34.x86_64 file-libs-5.39-4.fc34.x86_64 filesystem-3.14-4.fc34.x86_64 findutils-1:4.8.0-1.fc34.x86_64 fonts-srpm-macros-1:2.0.5-4.fc33.noarch fpc-srpm-macros-1.3-2.fc33.noarch gawk-5.1.0-2.fc33.x86_64 gc-8.0.4-4.fc33.x86_64 gdb-minimal-10.1-2.fc34.x86_64 ghc-srpm-macros-1.5.0-3.fc33.noarch glibc-2.32.9000-26.fc34.x86_64 glibc-common-2.32.9000-26.fc34.x86_64 glibc-minimal-langpack-2.32.9000-26.fc34.x86_64 gmp-1:6.2.0-5.fc34.x86_64 gnat-srpm-macros-4-12.fc33.noarch go-srpm-macros-3.0.9-1.fc34.noarch grep-3.6-1.fc34.x86_64 guile22-2.2.7-1.fc34.x86_64 gzip-1.10-3.fc33.x86_64 info-6.7-8.fc33.x86_64 kernel-srpm-macros-1.0-3.fc33.noarch keyutils-libs-1.6.1-1.fc34.x86_64 krb5-libs-1.19-0.beta2.1.fc34.2.x86_64 libacl-2.2.53-9.fc34.x86_64 libarchive-3.5.1-1.fc34.x86_64 libattr-2.4.48-10.fc33.x86_64 libblkid-2.36.1-4.fc34.x86_64 libbrotli-1.0.9-3.fc34.x86_64 libcap-2.46-1.fc34.x86_64 libcap-ng-0.8.2-1.fc34.x86_64 libcom_err-1.45.6-4.fc33.x86_64 libcurl-7.74.0-4.fc34.x86_64 libdb-5.3.28-45.fc34.x86_64 libeconf-0.3.8-4.fc33.x86_64 libfdisk-2.36.1-4.fc34.x86_64 libffi-3.1-27.fc34.x86_64 libgcc-11.0.0-0.17.fc34.x86_64 libgcrypt-1.9.0-1.fc34.x86_64 libgomp-11.0.0-0.17.fc34.x86_64 libgpg-error-1.41-1.fc34.x86_64 libidn2-2.3.0-4.fc34.x86_64 libmetalink-0.1.3-13.fc33.x86_64 libmount-2.36.1-4.fc34.x86_64 libnghttp2-1.42.0-1.fc34.x86_64 libnsl2-1.3.0-1.fc34.x86_64 libpkgconf-1.7.3-5.fc34.x86_64 libpsl-0.21.1-2.fc33.x86_64 libpwquality-1.4.4-2.fc34.x86_64 libselinux-3.2-0.rc1.1.fc34.x86_64 libsemanage-3.2-0.rc1.1.fc34.x86_64 libsepol-3.2-0.rc1.1.fc34.x86_64 libsigsegv-2.13-1.fc34.x86_64 libsmartcols-2.36.1-4.fc34.x86_64 libssh-0.9.5-1.fc34.x86_64 libssh-config-0.9.5-1.fc34.noarch libstdc++-11.0.0-0.17.fc34.x86_64 libtasn1-4.16.0-3.fc33.x86_64 libtirpc-1.3.1-0.fc34.x86_64 libtool-ltdl-2.4.6-38.fc34.x86_64 libunistring-0.9.10-9.fc33.x86_64 libutempter-1.2.1-3.fc34.x86_64 libuuid-2.36.1-4.fc34.x86_64 libverto-0.3.1-2.fc34.x86_64 libxcrypt-4.4.17-1.fc34.x86_64 libxml2-2.9.10-9.fc34.x86_64 libzstd-1.4.7-1.fc34.x86_64 lua-libs-5.4.2-1.fc34.x86_64 lua-srpm-macros-1-3.fc34.noarch lz4-libs-1.9.3-1.fc34.x86_64 make-1:4.3-2.fc33.x86_64 mpfr-4.1.0-2.fc33.x86_64 ncurses-base-6.2-3.20200222.fc33.noarch ncurses-libs-6.2-3.20200222.fc33.x86_64 nim-srpm-macros-3-3.fc33.noarch ocaml-srpm-macros-6-3.fc33.noarch openblas-srpm-macros-2-8.fc33.noarch openldap-2.4.57-1.fc34.x86_64 openssl-libs-1:1.1.1i-1.fc34.x86_64 p11-kit-0.23.22-3.fc34.x86_64 p11-kit-trust-0.23.22-3.fc34.x86_64 pam-1.5.1-2.fc34.x86_64 patch-2.7.6-13.fc33.x86_64 pcre-8.44-3.fc34.x86_64 pcre2-10.36-2.fc34.x86_64 pcre2-syntax-10.36-2.fc34.noarch perl-srpm-macros-1-38.fc33.noarch pkgconf-1.7.3-5.fc34.x86_64 pkgconf-m4-1.7.3-5.fc34.noarch pkgconf-pkg-config-1.7.3-5.fc34.x86_64 popt-1.18-2.fc34.x86_64 publicsuffix-list-dafsa-20190417-4.fc33.noarch python-srpm-macros-3.9-11.fc34.noarch qt5-srpm-macros-5.15.2-1.fc34.noarch readline-8.1-1.fc34.x86_64 redhat-rpm-config-180-1.fc34.noarch rpm-4.16.1.2-4.fc34.x86_64 rpm-build-4.16.1.2-4.fc34.x86_64 rpm-build-libs-4.16.1.2-4.fc34.x86_64 rpm-libs-4.16.1.2-4.fc34.x86_64 rust-srpm-macros-17-1.fc34.noarch sed-4.8-6.fc34.x86_64 setup-2.13.7-2.fc33.noarch shadow-utils-2:4.8.1-6.fc34.x86_64 sqlite-libs-3.34.1-1.fc34.x86_64 systemd-libs-247.2-1.fc34.x86_64 tar-2:1.33-2.fc34.x86_64 tzdata-2021a-1.fc34.noarch unzip-6.0-49.fc33.x86_64 util-linux-2.36.1-4.fc34.x86_64 which-2.21-20.fc33.x86_64 xxhash-libs-0.8.0-1.fc33.x86_64 xz-5.2.5-4.fc34.x86_64 xz-libs-5.2.5-4.fc34.x86_64 zip-3.0-27.fc33.x86_64 zlib-1.2.11-23.fc34.x86_64 zstd-1.4.7-1.fc34.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: file-libs-5.39-4.fc34.x86_64 rust-srpm-macros-17-1.fc34.noarch xz-5.2.5-4.fc34.x86_64 libdb-5.3.28-45.fc34.x86_64 popt-1.18-2.fc34.x86_64 libunistring-0.9.10-9.fc33.x86_64 libgcrypt-1.9.0-1.fc34.x86_64 gzip-1.10-3.fc33.x86_64 gpg-pubkey-9570ff31-5e3006fb libattr-2.4.48-10.fc33.x86_64 zlib-1.2.11-23.fc34.x86_64 libtool-ltdl-2.4.6-38.fc34.x86_64 kernel-srpm-macros-1.0-3.fc33.noarch cyrus-sasl-lib-2.1.27-6.fc33.x86_64 libgpg-error-1.41-1.fc34.x86_64 libbrotli-1.0.9-3.fc34.x86_64 basesystem-11-10.fc33.noarch p11-kit-trust-0.23.22-3.fc34.x86_64 bzip2-libs-1.0.8-4.fc33.x86_64 zip-3.0-27.fc33.x86_64 libmount-2.36.1-4.fc34.x86_64 expat-2.2.10-1.fc34.x86_64 gpg-pubkey-45719a39-5f2c0192 sqlite-libs-3.34.1-1.fc34.x86_64 glibc-2.32.9000-26.fc34.x86_64 rpm-build-libs-4.16.1.2-4.fc34.x86_64 libmetalink-0.1.3-13.fc33.x86_64 publicsuffix-list-dafsa-20190417-4.fc33.noarch nim-srpm-macros-3-3.fc33.noarch fedora-repos-rawhide-34-0.8.noarch ed-1.14.2-9.fc33.x86_64 libpkgconf-1.7.3-5.fc34.x86_64 libarchive-3.5.1-1.fc34.x86_64 crypto-policies-20210127-2.gitb21c811.fc34.noarch elfutils-libelf-0.182-2.fc34.x86_64 openssl-libs-1.1.1i-1.fc34.x86_64 coreutils-8.32-15.fc34.x86_64 fedora-gpg-keys-34-0.8.noarch libuuid-2.36.1-4.fc34.x86_64 bash-5.1.0-1.fc34.x86_64 ncurses-libs-6.2-3.20200222.fc33.x86_64 ca-certificates-2020.2.41-6.fc34.noarch qt5-srpm-macros-5.15.2-1.fc34.noarch audit-libs-3.0-1.fc34.x86_64 findutils-4.8.0-1.fc34.x86_64 pkgconf-m4-1.7.3-5.fc34.noarch openldap-2.4.57-1.fc34.x86_64 bzip2-1.0.8-4.fc33.x86_64 libblkid-2.36.1-4.fc34.x86_64 binutils-2.35.1-25.fc34.x86_64 coreutils-common-8.32-15.fc34.x86_64 sed-4.8-6.fc34.x86_64 gmp-6.2.0-5.fc34.x86_64 make-4.3-2.fc33.x86_64 fpc-srpm-macros-1.3-2.fc33.noarch fedora-release-common-34-0.10.noarch patch-2.7.6-13.fc33.x86_64 libxcrypt-4.4.17-1.fc34.x86_64 gc-8.0.4-4.fc33.x86_64 libselinux-3.2-0.rc1.1.fc34.x86_64 setup-2.13.7-2.fc33.noarch libtasn1-4.16.0-3.fc33.x86_64 libtirpc-1.3.1-0.fc34.x86_64 binutils-gold-2.35.1-25.fc34.x86_64 libnghttp2-1.42.0-1.fc34.x86_64 perl-srpm-macros-1-38.fc33.noarch ghc-srpm-macros-1.5.0-3.fc33.noarch info-6.7-8.fc33.x86_64 elfutils-libs-0.182-2.fc34.x86_64 libgomp-11.0.0-0.17.fc34.x86_64 gdb-minimal-10.1-2.fc34.x86_64 cpio-2.13-8.fc33.x86_64 python-srpm-macros-3.9-11.fc34.noarch which-2.21-20.fc33.x86_64 rpm-4.16.1.2-4.fc34.x86_64 libffi-3.1-27.fc34.x86_64 pkgconf-1.7.3-5.fc34.x86_64 libcap-2.46-1.fc34.x86_64 dwz-0.13-7.fc34.x86_64 pkgconf-pkg-config-1.7.3-5.fc34.x86_64 fedora-release-34-0.10.noarch file-5.39-4.fc34.x86_64 lua-libs-5.4.2-1.fc34.x86_64 libpsl-0.21.1-2.fc33.x86_64 libssh-config-0.9.5-1.fc34.noarch fonts-srpm-macros-2.0.5-4.fc33.noarch glibc-common-2.32.9000-26.fc34.x86_64 util-linux-2.36.1-4.fc34.x86_64 lz4-libs-1.9.3-1.fc34.x86_64 libeconf-0.3.8-4.fc33.x86_64 redhat-rpm-config-180-1.fc34.noarch elfutils-debuginfod-client-0.182-2.fc34.x86_64 p11-kit-0.23.22-3.fc34.x86_64 libutempter-1.2.1-3.fc34.x86_64 gnat-srpm-macros-4-12.fc33.noarch rpm-build-4.16.1.2-4.fc34.x86_64 glibc-minimal-langpack-2.32.9000-26.fc34.x86_64 libxml2-2.9.10-9.fc34.x86_64 go-srpm-macros-3.0.9-1.fc34.noarch keyutils-libs-1.6.1-1.fc34.x86_64 libfdisk-2.36.1-4.fc34.x86_64 systemd-libs-247.2-1.fc34.x86_64 libsigsegv-2.13-1.fc34.x86_64 libsmartcols-2.36.1-4.fc34.x86_64 curl-7.74.0-4.fc34.x86_64 diffutils-3.7-7.fc34.x86_64 xxhash-libs-0.8.0-1.fc33.x86_64 krb5-libs-1.19-0.beta2.1.fc34.2.x86_64 libcurl-7.74.0-4.fc34.x86_64 fedora-repos-34-0.8.noarch readline-8.1-1.fc34.x86_64 lua-srpm-macros-1-3.fc34.noarch ncurses-base-6.2-3.20200222.fc33.noarch mpfr-4.1.0-2.fc33.x86_64 alternatives-1.15-1.fc34.x86_64 pcre2-10.36-2.fc34.x86_64 libsemanage-3.2-0.rc1.1.fc34.x86_64 ocaml-srpm-macros-6-3.fc33.noarch libidn2-2.3.0-4.fc34.x86_64 libssh-0.9.5-1.fc34.x86_64 libcom_err-1.45.6-4.fc33.x86_64 grep-3.6-1.fc34.x86_64 openblas-srpm-macros-2-8.fc33.noarch pcre2-syntax-10.36-2.fc34.noarch libsepol-3.2-0.rc1.1.fc34.x86_64 fedora-release-identity-basic-34-0.10.noarch shadow-utils-4.8.1-6.fc34.x86_64 zstd-1.4.7-1.fc34.x86_64 elfutils-0.182-2.fc34.x86_64 unzip-6.0-49.fc33.x86_64 libnsl2-1.3.0-1.fc34.x86_64 libgcc-11.0.0-0.17.fc34.x86_64 cracklib-2.9.6-24.fc33.x86_64 efi-srpm-macros-4-5.fc33.noarch libverto-0.3.1-2.fc34.x86_64 rpm-libs-4.16.1.2-4.fc34.x86_64 pcre-8.44-3.fc34.x86_64 guile22-2.2.7-1.fc34.x86_64 gawk-5.1.0-2.fc33.x86_64 elfutils-default-yama-scope-0.182-2.fc34.noarch libstdc++-11.0.0-0.17.fc34.x86_64 libacl-2.2.53-9.fc34.x86_64 libpwquality-1.4.4-2.fc34.x86_64 filesystem-3.14-4.fc34.x86_64 libcap-ng-0.8.2-1.fc34.x86_64 tar-1.33-2.fc34.x86_64 xz-libs-5.2.5-4.fc34.x86_64 tzdata-2021a-1.fc34.noarch libzstd-1.4.7-1.fc34.x86_64 pam-1.5.1-2.fc34.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1609459200 Wrote: /builddir/build/SRPMS/apbs-3.0.0-6.fc34.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1611922105.980445/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1611922105.980445/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1611922105.980445/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/tmp/copr-rpmbuild-6j_cq6nv/obtain-sources/apbs/apbs.spec) Config(child) 1 minutes 13 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run INFO: unmounting tmpfs. Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/apbs-3.0.0-6.fc34.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1611922180.450503 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.9 starting (python version = 3.9.1, NVR = mock-2.9-1.fc33)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/apbs-3.0.0-6.fc34.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1611922180.450503/root. INFO: calling preinit hooks INFO: enabled root cache Start(bootstrap): unpacking root cache Finish(bootstrap): unpacking root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.9 INFO: Mock Version: 2.9 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1611922180.450503/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.9 INFO: Mock Version: 2.9 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk Copr repository 115 kB/s | 3.6 kB 00:00 Copr repository 17 MB/s | 809 kB 00:00 fedora 38 kB/s | 8.1 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for apbs-3.0.0-6.fc34.src.rpm Start: build setup for apbs-3.0.0-6.fc34.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1609459200 Wrote: /builddir/build/SRPMS/apbs-3.0.0-6.fc34.src.rpm No matches found for the following disable plugin patterns: local, spacewalk Copr repository 203 kB/s | 3.6 kB 00:00 fedora 38 kB/s | 8.1 kB 00:00 Package make-1:4.3-2.fc33.x86_64 is already installed. Dependencies resolved. ================================================================================================ Package Arch Version Repo Size ================================================================================================ Installing: [1mcmake [m x86_64 3.19.3-1.fc34 fedora 5.7 M [1mdoxygen [m x86_64 1:1.9.1-4.fc34 fedora 4.8 M [1mgcc-c++ [m x86_64 11.0.0-0.17.fc34 fedora 12 M [1mgraphviz [m x86_64 2.44.0-16.fc34 fedora 3.4 M [1mmaloc-devel [m x86_64 1.5-21.fc33 fedora 1.3 M [1mpython3-devel [m x86_64 3.9.1-4.fc34 fedora 206 k [1mpython3-numpy [m x86_64 1:1.20.0-0.1.rc2.fc34 fedora 4.8 M [1mpython3-sphinx [m noarch 1:3.4.3-1.fc34 fedora 2.2 M [1mswig [m x86_64 4.0.2-3.fc34 fedora 1.4 M [1mtexlive-collection-latexrecommended [m noarch 9:svn54074-36.fc34 fedora 14 k [1mzlib-devel [m x86_64 1.2.11-23.fc34 fedora 44 k Installing dependencies: [1madobe-mappings-cmap [m noarch 20171205-9.fc33 fedora 1.9 M [1madobe-mappings-cmap-deprecated [m noarch 20171205-9.fc33 fedora 109 k [1madobe-mappings-pdf [m noarch 20180407-7.fc33 fedora 668 k [1mannobin [m x86_64 9.58-1.fc34 fedora 135 k [1matk [m x86_64 2.36.0-2.fc33 fedora 273 k [1mavahi-libs [m x86_64 0.8-6.fc34 fedora 67 k [1mbiber [m noarch 2.14-4.fc33 fedora 299 k [1mcairo [m x86_64 1.17.4-1.fc34 fedora 670 k [1mcairo-gobject [m x86_64 1.17.4-1.fc34 fedora 18 k [1mclang-libs [m x86_64 11.1.0-0.3.rc2.fc34 fedora 22 M [1mclang-resource-filesystem [m x86_64 11.1.0-0.3.rc2.fc34 fedora 13 k [1mcmake-data [m noarch 3.19.3-1.fc34 fedora 1.5 M [1mcmake-filesystem [m x86_64 3.19.3-1.fc34 fedora 16 k [1mcmake-rpm-macros [m noarch 3.19.3-1.fc34 fedora 15 k [1mcpp [m x86_64 11.0.0-0.17.fc34 fedora 10 M [1mcrypto-policies-scripts [m noarch 20210127-2.gitb21c811.fc34 fedora 65 k [1mcups-libs [m x86_64 1:2.3.3op1-1.fc34 fedora 274 k [1mdbus-libs [m x86_64 1:1.12.20-2.fc33 fedora 154 k [1mdejavu-sans-fonts [m noarch 2.37-15.fc34 fedora 1.3 M [1memacs-filesystem [m noarch 1:27.1-2.fc34 fedora 8.2 k [1mflexiblas [m x86_64 3.0.4-2.fc34 fedora 31 k [1mflexiblas-netlib [m x86_64 3.0.4-2.fc34 fedora 3.0 M [1mflexiblas-openblas-openmp [m x86_64 3.0.4-2.fc34 fedora 17 k [1mfontconfig [m x86_64 2.13.93-4.fc34 fedora 275 k [1mfonts-filesystem [m noarch 1:2.0.5-4.fc33 fedora 8.7 k [1mfreetype [m x86_64 2.10.4-1.fc34 fedora 391 k [1mfribidi [m x86_64 1.0.10-3.fc33 fedora 86 k [1mgcc [m x86_64 11.0.0-0.17.fc34 fedora 31 M [1mgd [m x86_64 2.3.0-3.fc33 fedora 137 k [1mgdbm-libs [m x86_64 1:1.19-1.fc34 fedora 54 k [1mgdk-pixbuf2 [m x86_64 2.40.0-3.fc33 fedora 463 k [1mgdk-pixbuf2-modules [m x86_64 2.40.0-3.fc33 fedora 98 k [1mghostscript [m x86_64 9.53.3-4.fc34 fedora 38 k [1mglib2 [m x86_64 2.67.1-3.fc34 fedora 2.7 M [1mglibc-devel [m x86_64 2.32.9000-26.fc34 fedora 1.1 M [1mglibc-headers-x86 [m noarch 2.32.9000-26.fc34 fedora 514 k [1mgnutls [m x86_64 3.6.15-2.fc34 fedora 925 k [1mgoogle-droid-sans-fonts [m noarch 20200215-8.fc34 fedora 2.7 M [1mgraphite2 [m x86_64 1.3.14-6.fc34 fedora 95 k [1mgroff-base [m x86_64 1.22.4-4.fc34 fedora 1.1 M [1mgtk-update-icon-cache [m x86_64 3.24.24-2.fc34 fedora 33 k [1mgtk2 [m x86_64 2.24.33-3.fc34 fedora 3.6 M [1mgts [m x86_64 0.7.6-38.20121130.fc33 fedora 237 k [1mharfbuzz [m x86_64 2.7.4-1.fc34 fedora 635 k [1mhicolor-icon-theme [m noarch 0.17-9.fc33 fedora 44 k [1misl [m x86_64 0.16.1-12.fc33 fedora 876 k [1mjasper-libs [m x86_64 2.0.24-1.fc34 fedora 152 k [1mjbig2dec-libs [m x86_64 0.19-3.fc34 fedora 74 k [1mjbigkit-libs [m x86_64 2.1-20.fc34 fedora 52 k [1mjsoncpp [m x86_64 1.9.4-2.fc34 fedora 96 k [1mkernel-headers [m x86_64 5.11.0-0.rc5.git0.1.fc34 fedora 1.2 M [1mlangpacks-core-font-en [m noarch 3.0-6.fc34 fedora 9.7 k [1mlasi [m x86_64 1.1.3-4.fc33 fedora 56 k [1mlcms2 [m x86_64 2.11-2.fc33 fedora 169 k [1mlibICE [m x86_64 1.0.10-5.fc34 fedora 71 k [1mlibSM [m x86_64 1.2.3-7.fc34 fedora 42 k [1mlibX11 [m x86_64 1.7.0-2.fc34 fedora 660 k [1mlibX11-common [m noarch 1.7.0-2.fc34 fedora 153 k [1mlibXau [m x86_64 1.0.9-5.fc34 fedora 31 k 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fedora 272 k [1mtexlive-wasysym [m noarch 9:svn54080-36.fc34 fedora 20 k [1mtexlive-xcolor [m noarch 9:svn41044-36.fc34 fedora 34 k [1mtexlive-xdvi [m x86_64 9:20200327-25.fc34 fedora 364 k [1mtexlive-xetex [m x86_64 9:20200327-25.fc34 fedora 1.2 M [1mtexlive-xetexconfig [m noarch 9:svn45845-36.fc34 fedora 13 k [1mtexlive-xifthen [m noarch 9:svn38929-36.fc34 fedora 18 k [1mtexlive-xkeyval [m noarch 9:svn35741.2.7a-36.fc34 fedora 34 k [1mtexlive-xltxtra [m noarch 9:svn49555-36.fc34 fedora 19 k [1mtexlive-xpatch [m noarch 9:svn54563-36.fc34 fedora 20 k [1mtexlive-xstring [m noarch 9:svn49946-36.fc34 fedora 27 k [1mtexlive-xunicode [m noarch 9:svn30466.0.981-36.fc34 fedora 46 k [1mtexlive-zapfchan [m noarch 9:svn31835.0-36.fc34 fedora 108 k [1mtexlive-zapfding [m noarch 9:svn31835.0-36.fc34 fedora 67 k [1mtexlive-zref [m noarch 9:svn54098-36.fc34 fedora 666 k [1murw-base35-bookman-fonts [m noarch 20200910-2.fc34 fedora 856 k [1murw-base35-c059-fonts [m noarch 20200910-2.fc34 fedora 884 k 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0.13.71-1.fc34 fedora 86 k Transaction Summary ================================================================================================ Install 680 Packages Total size: 419 M Total download size: 306 M Installed size: 1.2 G Downloading Packages: [SKIPPED] python3-pygments-2.7.4-1.fc34.noarch.rpm: Already downloaded [SKIPPED] annobin-9.58-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] atk-2.36.0-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] avahi-libs-0.8-6.fc34.x86_64.rpm: Already downloaded [SKIPPED] cairo-1.17.4-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] cairo-gobject-1.17.4-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] cmake-filesystem-3.19.3-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] cpp-11.0.0-0.17.fc34.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-scripts-20210127-2.gitb21c811.fc34.noarch.rpm: Already downloaded [SKIPPED] cups-libs-2.3.3op1-1.fc34.x86_64.rpm: Already downloaded [SKIPPED] dbus-libs-1.12.20-2.fc33.x86_64.rpm: Already downloaded 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174/680 Installing : perl-Scalar-List-Utils-4:1.55-457.fc33.x86_64 175/680 Installing : perl-constant-1.33-458.fc33.noarch 176/680 Installing : perl-Storable-1:3.21-457.fc33.x86_64 177/680 Installing : perl-overload-1.31-469.fc34.noarch 178/680 Installing : perl-parent-1:0.238-457.fc33.noarch 179/680 Installing : perl-vars-1.05-469.fc34.noarch 180/680 Installing : perl-Getopt-Long-1:2.52-1.fc34.noarch 181/680 Installing : perl-Carp-1.50-457.fc33.noarch 182/680 Installing : perl-Exporter-5.74-458.fc33.noarch 183/680 Installing : perl-PathTools-3.78-458.fc34.x86_64 184/680 Installing : perl-Encode-4:3.08-458.fc34.x86_64 185/680 Installing : perl-libs-4:5.32.1-469.fc34.x86_64 186/680 Installing : perl-interpreter-4:5.32.1-469.fc34.x86_64 187/680 Installing : perl-DynaLoader-1.47-469.fc34.x86_64 188/680 Installing : perl-File-Find-1.37-469.fc34.noarch 189/680 Installing : perl-Try-Tiny-0.30-10.fc33.noarch 190/680 Installing : perl-Module-Runtime-0.016-10.fc33.noarch 191/680 Installing : perl-locale-1.09-469.fc34.noarch 192/680 Installing : perl-version-7:0.99.28-1.fc34.x86_64 193/680 Installing : perl-Dist-CheckConflicts-0.11-20.fc33.noarch 194/680 Installing : perl-Module-Implementation-0.09-27.fc33.noarch 195/680 Installing : perl-File-Copy-2.34-469.fc34.noarch 196/680 Installing : perl-Unicode-Normalize-1.27-458.fc33.x86_64 197/680 Installing : perl-Compress-Raw-Zlib-2.100-1.fc34.x86_64 198/680 Installing : perl-LWP-MediaTypes-6.04-6.fc33.noarch 199/680 Installing : perl-Params-Util-1.102-2.fc34.x86_64 200/680 Installing : perl-Sys-Hostname-1.23-469.fc34.x86_64 201/680 Installing : perl-Time-HiRes-4:1.9764-459.fc34.x86_64 202/680 Installing : perl-Clone-0.45-3.fc33.x86_64 203/680 Installing : perl-Data-Dump-1.23-15.fc33.noarch 204/680 Installing : perl-Date-ISO8601-0.005-10.fc33.noarch 205/680 Installing : perl-Devel-StackTrace-1:2.04-7.fc33.noarch 206/680 Installing : perl-List-MoreUtils-XS-0.430-1.fc34.x86_64 207/680 Installing : perl-PerlIO-utf8_strict-0.008-1.fc34.x86_64 208/680 Installing : perl-Sub-Install-0.928-25.fc33.noarch 209/680 Installing : perl-Text-Unidecode-1.30-13.fc33.noarch 210/680 Installing : perl-TimeDate-1:2.33-3.fc33.noarch 211/680 Installing : perl-HTTP-Date-6.05-4.fc33.noarch 212/680 Installing : perl-XML-NamespaceSupport-1.12-12.fc33.noarch 213/680 Installing : perl-XML-Parser-2.46-6.fc33.x86_64 214/680 Installing : perl-XML-SAX-Base-1.09-12.fc33.noarch 215/680 Installing : perl-File-Listing-6.14-1.fc34.noarch 216/680 Installing : perl-Data-OptList-0.110-14.fc33.noarch 217/680 Installing : perl-File-Slurper-0.012-9.fc33.noarch 218/680 Installing : perl-Mail-Sendmail-0.80-10.fc33.noarch 219/680 Installing : perl-Text-BibTeX-0.88-6.fc33.x86_64 220/680 Installing : perl-Unicode-Collate-1.29-1.fc34.x86_64 221/680 Installing : perl-Unicode-UCD-0.75-469.fc34.noarch 222/680 Installing : perl-List-SomeUtils-0.58-4.fc33.noarch 223/680 Installing : perl-Params-Validate-1.30-1.fc34.x86_64 224/680 Installing : perl-Module-CoreList-1:5.20210123-1.fc34.noarch 225/680 Installing : perl-Module-Metadata-1.000037-457.fc33.noarch 226/680 Installing : perl-Pod-Html-1.25-469.fc34.noarch 227/680 Installing : perl-Sort-Key-1.33-19.fc33.x86_64 228/680 Installing : perl-Date-Manip-6.83-2.fc34.noarch 229/680 Installing : perl-DynaLoader-Functions-0.003-10.fc33.noarch 230/680 Installing : perl-Devel-CallChecker-0.008-11.fc33.x86_64 231/680 Installing : perl-Params-Classify-0.015-11.fc33.x86_64 232/680 Installing : perl-DateTime-TimeZone-SystemV-0.010-11.fc33.noa 233/680 Installing : perl-DateTime-TimeZone-Tzfile-0.011-11.fc33.noar 234/680 Installing : perl-PadWalker-2.5-1.fc34.x86_64 235/680 Installing : perl-Devel-Caller-2.06-23.fc33.x86_64 236/680 Installing : perl-Devel-LexAlias-0.05-24.fc33.x86_64 237/680 Installing : perl-Business-ISSN-1.004-3.fc33.noarch 238/680 Installing : perl-Class-Accessor-0.51-10.fc33.noarch 239/680 Installing : perl-Class-Data-Inheritable-0.08-36.fc33.noarch 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perl-ExtUtils-MM-Utils-2:7.58-1.fc34.noarch 257/680 Installing : perl-File-Compare-1.100.600-469.fc34.noarch 258/680 Installing : perl-HTML-Tagset-3.20-44.fc33.noarch 259/680 Installing : perl-Hash-Util-FieldHash-1.20-469.fc34.x86_64 260/680 Installing : perl-I18N-LangTags-0.44-469.fc34.noarch 261/680 Installing : perl-Locale-Maketext-1.29-458.fc33.noarch 262/680 Installing : perl-Locale-Maketext-Simple-1:0.21-469.fc34.noar 263/680 Installing : perl-Params-Check-1:0.38-458.fc34.noarch 264/680 Installing : perl-I18N-Langinfo-0.19-469.fc34.x86_64 265/680 Installing : perl-Encode-Locale-1.05-18.fc33.noarch 266/680 Installing : perl-IO-HTML-1.004-1.fc34.noarch 267/680 Installing : perl-HTTP-Message-6.27-1.fc34.noarch 268/680 Installing : perl-HTML-Parser-3.75-2.fc34.x86_64 269/680 Installing : perl-HTTP-Negotiate-6.01-27.fc33.noarch 270/680 Installing : perltidy-20210111-1.fc34.noarch 271/680 Installing : perl-Eval-Closure-0.14-13.fc33.noarch 272/680 Installing : perl-Params-ValidationCompiler-0.30-9.fc33.noarc 273/680 Installing : perl-HTTP-Cookies-6.10-1.fc34.noarch 274/680 Installing : perl-IO-String-1.08-40.fc33.noarch 275/680 Installing : perl-IPC-Run3-0.048-20.fc33.noarch 276/680 Installing : perl-IPC-SysV-2.09-1.fc34.x86_64 277/680 Installing : perl-List-UtilsBy-0.11-10.fc33.noarch 278/680 Installing : perl-List-AllUtils-0.18-1.fc34.noarch 279/680 Installing : perl-MIME-Charset-1.012.2-12.fc33.noarch 280/680 Installing : perl-Unicode-LineBreak-2019.001-8.fc33.x86_64 281/680 Installing : perl-MIME-Types-2.18-1.fc34.noarch 282/680 Installing : perl-MIME-Lite-3.031-4.fc33.noarch 283/680 Installing : perl-MRO-Compat-0.13-12.fc33.noarch 284/680 Installing : perl-Mail-Sender-1:0.903-13.fc33.noarch 285/680 Installing : perl-Math-Complex-1.59-469.fc34.noarch 286/680 Installing : perl-Math-BigInt-1:1.9998.18-457.fc33.noarch 287/680 Installing : perl-Data-Uniqid-0.12-23.fc33.noarch 288/680 Installing : perl-JSON-4.03-1.fc34.noarch 289/680 Installing : perl-Module-Load-1:0.36-1.fc34.noarch 290/680 Installing : perl-Module-Load-Conditional-0.74-1.fc34.noarch 291/680 Installing : perl-IPC-Cmd-2:1.04-458.fc33.noarch 292/680 Installing : perl-NTLM-1.09-27.fc33.noarch 293/680 Installing : perl-Net-SMTP-SSL-1.04-13.fc33.noarch 294/680 Installing : perl-MailTools-2.21-6.fc33.noarch 295/680 Installing : perl-Number-Compare-0.03-27.fc33.noarch 296/680 Installing : perl-Opcode-1.48-469.fc34.x86_64 297/680 Installing : perl-Safe-2.41-469.fc34.noarch 298/680 Installing : perl-Package-Generator-1.106-20.fc34.noarch 299/680 Installing : perl-Sub-Exporter-0.987-24.fc33.noarch 300/680 Installing : perl-Sub-Exporter-Progressive-0.001013-13.fc33.n 301/680 Installing : perl-Devel-GlobalDestruction-0.14-13.fc33.noarch 302/680 Installing : perl-Package-Stash-XS-0.29-8.fc33.x86_64 303/680 Installing : perl-Package-Stash-0.39-1.fc34.noarch 304/680 Installing : perl-Ref-Util-XS-0.117-10.fc33.x86_64 305/680 Installing : perl-Ref-Util-0.204-9.fc33.noarch 306/680 Installing : perl-Regexp-Common-2017060201-13.fc33.noarch 307/680 Installing : perl-Sub-Identify-0.14-14.fc33.x86_64 308/680 Installing : perl-Sys-Syslog-0.36-458.fc33.x86_64 309/680 Installing : perl-Text-Balanced-2.04-1.fc34.noarch 310/680 Installing : perl-Parse-RecDescent-1.967015-12.fc33.noarch 311/680 Installing : perl-Text-CSV-2.00-5.fc33.noarch 312/680 Installing : perl-Text-Glob-0.11-12.fc33.noarch 313/680 Installing : perl-File-Find-Rule-0.34-16.fc33.noarch 314/680 Installing : perl-Data-Compare-1.27-4.fc33.noarch 315/680 Installing : perl-Text-Roman-3.5-17.fc33.noarch 316/680 Installing : perl-Tie-Cycle-1.226-1.fc34.noarch 317/680 Installing : perl-Business-ISMN-1.201-7.fc33.noarch 318/680 Installing : perl-Variable-Magic-0.62-11.fc33.x86_64 319/680 Installing : perl-B-Hooks-EndOfScope-0.24-12.fc33.noarch 320/680 Installing : perl-namespace-clean-0.27-15.fc33.noarch 321/680 Installing : perl-namespace-autoclean-0.29-5.fc33.noarch 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perl-Log-Dispatch-FileRotate-1.36-7.fc33.noarch 337/680 Installing : perl-DateTime-Format-Strptime-1:1.78-1.fc34.noar 338/680 Installing : perl-DateTime-Format-Builder-0.8300-1.fc33.noarc 339/680 Installing : perl-DateTime-Calendar-Julian-0.103-1.fc34.noarc 340/680 Installing : perl-autovivification-0.18-11.fc33.x86_64 341/680 Installing : perl-deprecate-0.04-469.fc34.noarch 342/680 Installing : perl-Text-Soundex-3.05-17.fc33.x86_64 343/680 Installing : perl-LDAP-1:0.68-1.fc34.noarch 344/680 Installing : perl-Log-Log4perl-1.53-1.fc34.noarch 345/680 Installing : perl-meta-notation-5.32.1-469.fc34.noarch 346/680 Installing : perl-sigtrap-1.09-469.fc34.noarch 347/680 Installing : glibc-headers-x86-2.32.9000-26.fc34.noarch 348/680 Installing : libxcrypt-devel-4.4.17-1.fc34.x86_64 349/680 Installing : glibc-devel-2.32.9000-26.fc34.x86_64 350/680 Installing : gcc-11.0.0-0.17.fc34.x86_64 351/680 Installing : perl-Filter-2:1.60-1.fc33.x86_64 352/680 Installing : perl-encoding-4:3.00-458.fc34.x86_64 353/680 Installing : perl-open-1.12-469.fc34.noarch 354/680 Installing : perl-XML-XPath-1.44-8.fc34.noarch 355/680 Installing : texlive-epstopdf-pkg-9:svn53546-36.fc34.noarch 356/680 Installing : texlive-cm-9:svn49028-36.fc34.noarch 357/680 Installing : texlive-etex-9:svn37057.0-36.fc34.noarch 358/680 Installing : texlive-graphics-def-9:svn54522-36.fc34.noarch 359/680 Installing : texlive-hyph-utf8-9:svn54568-36.fc34.noarch 360/680 Installing : texlive-hyphen-base-9:svn54763-36.fc34.noarch 361/680 Installing : texlive-knuth-lib-9:svn35820.0-36.fc34.noarch 362/680 Installing : texlive-plain-9:svn43076-36.fc34.noarch 363/680 Installing : texlive-tex-ini-files-9:svn40533-36.fc34.noarch 364/680 Installing : texlive-unicode-data-9:svn54758-36.fc34.noarch 365/680 Installing : texlive-luatex-9:20200327-25.fc34.x86_64 366/680 Installing : texlive-texlive.infra-9:20200327-25.fc34.noarch 367/680 Installing : texlive-texlive-scripts-9:20200327-25.fc34.noarc 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texlive-latex-fonts-9:svn28888.0-36.fc34.noarch 384/680 Installing : texlive-lm-9:svn48145-36.fc34.noarch 385/680 Installing : texlive-ltxcmds-9:svn53165-36.fc34.noarch 386/680 Installing : texlive-fp-9:svn49719-36.fc34.noarch 387/680 Installing : texlive-graphics-cfg-9:svn41448-36.fc34.noarch 388/680 Installing : texlive-graphics-9:svn53640-36.fc34.noarch 389/680 Installing : texlive-tools-9:svn53640-36.fc34.noarch 390/680 Installing : texlive-xkeyval-9:svn35741.2.7a-36.fc34.noarch 391/680 Installing : texlive-geometry-9:svn54080-36.fc34.noarch 392/680 Installing : texlive-caption-9:svn53517-36.fc34.noarch 393/680 Installing : texlive-colortbl-9:svn53545-36.fc34.noarch 394/680 Installing : texlive-intcalc-9:svn53168-36.fc34.noarch 395/680 Installing : texlive-marvosym-9:svn29349.2.2a-36.fc34.noarch 396/680 Installing : texlive-multido-9:svn18302.1.42-36.fc34.noarch 397/680 Installing : texlive-natbib-9:svn20668.8.31b-36.fc34.noarch 398/680 Installing : texlive-ragged2e-9:svn51780-36.fc34.noarch 399/680 Installing : texlive-setspace-9:svn24881.6.7a-36.fc34.noarch 400/680 Installing : texlive-zapfding-9:svn31835.0-36.fc34.noarch 401/680 Installing : texlive-subfig-9:svn15878.1.3-36.fc34.noarch 402/680 Installing : texlive-carlisle-9:svn47876-36.fc34.noarch 403/680 Installing : texlive-csquotes-9:svn53041-36.fc34.noarch 404/680 Installing : texlive-sauerj-9:svn15878.0-36.fc34.noarch 405/680 Installing : texlive-translator-9:svn54512-36.fc34.noarch 406/680 Installing : texlive-catchfile-9:svn53084-36.fc34.noarch 407/680 Installing : texlive-ifplatform-9:svn45533-36.fc34.noarch 408/680 Installing : texlive-babelbib-9:svn50354-36.fc34.noarch 409/680 Installing : texlive-memoir-9:svn54554-36.fc34.noarch 410/680 Installing : texlive-atveryend-9:svn53108-36.fc34.noarch 411/680 Installing : texlive-bookmark-9:svn53026-36.fc34.noarch 412/680 Installing : texlive-euenc-9:svn19795.0.1h-36.fc34.noarch 413/680 Installing : 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urw-base35-nimbus-sans-fonts-20200910-2.fc34.noa 680/680 Running scriptlet: urw-base35-p052-fonts-20200910-2.fc34.noarch 680/680 Running scriptlet: urw-base35-standard-symbols-ps-fonts-20200910-2. 680/680 Running scriptlet: urw-base35-z003-fonts-20200910-2.fc34.noarch 680/680 Running scriptlet: crypto-policies-scripts-20210127-2.gitb21c811.fc 680/680 Running scriptlet: nss-3.60.1-3.fc34.x86_64 680/680 Running scriptlet: swig-4.0.2-3.fc34.x86_64 680/680 Verifying : python3-pygments-2.7.4-1.fc34.noarch 1/680 Verifying : adobe-mappings-cmap-20171205-9.fc33.noarch 2/680 Verifying : adobe-mappings-cmap-deprecated-20171205-9.fc33.n 3/680 Verifying : adobe-mappings-pdf-20180407-7.fc33.noarch 4/680 Verifying : annobin-9.58-1.fc34.x86_64 5/680 Verifying : atk-2.36.0-2.fc33.x86_64 6/680 Verifying : avahi-libs-0.8-6.fc34.x86_64 7/680 Verifying : biber-2.14-4.fc33.noarch 8/680 Verifying : cairo-1.17.4-1.fc34.x86_64 9/680 Verifying : cairo-gobject-1.17.4-1.fc34.x86_64 10/680 Verifying : clang-libs-11.1.0-0.3.rc2.fc34.x86_64 11/680 Verifying : clang-resource-filesystem-11.1.0-0.3.rc2.fc34.x8 12/680 Verifying : cmake-3.19.3-1.fc34.x86_64 13/680 Verifying : cmake-data-3.19.3-1.fc34.noarch 14/680 Verifying : cmake-filesystem-3.19.3-1.fc34.x86_64 15/680 Verifying : cmake-rpm-macros-3.19.3-1.fc34.noarch 16/680 Verifying : cpp-11.0.0-0.17.fc34.x86_64 17/680 Verifying : crypto-policies-scripts-20210127-2.gitb21c811.fc 18/680 Verifying : cups-libs-1:2.3.3op1-1.fc34.x86_64 19/680 Verifying : dbus-libs-1:1.12.20-2.fc33.x86_64 20/680 Verifying : dejavu-sans-fonts-2.37-15.fc34.noarch 21/680 Verifying : doxygen-1:1.9.1-4.fc34.x86_64 22/680 Verifying : emacs-filesystem-1:27.1-2.fc34.noarch 23/680 Verifying : flexiblas-3.0.4-2.fc34.x86_64 24/680 Verifying : flexiblas-netlib-3.0.4-2.fc34.x86_64 25/680 Verifying : flexiblas-openblas-openmp-3.0.4-2.fc34.x86_64 26/680 Verifying : fontconfig-2.13.93-4.fc34.x86_64 27/680 Verifying : fonts-filesystem-1:2.0.5-4.fc33.noarch 28/680 Verifying : freetype-2.10.4-1.fc34.x86_64 29/680 Verifying : fribidi-1.0.10-3.fc33.x86_64 30/680 Verifying : gcc-11.0.0-0.17.fc34.x86_64 31/680 Verifying : gcc-c++-11.0.0-0.17.fc34.x86_64 32/680 Verifying : gd-2.3.0-3.fc33.x86_64 33/680 Verifying : gdbm-libs-1:1.19-1.fc34.x86_64 34/680 Verifying : gdk-pixbuf2-2.40.0-3.fc33.x86_64 35/680 Verifying : gdk-pixbuf2-modules-2.40.0-3.fc33.x86_64 36/680 Verifying : ghostscript-9.53.3-4.fc34.x86_64 37/680 Verifying : glib2-2.67.1-3.fc34.x86_64 38/680 Verifying : glibc-devel-2.32.9000-26.fc34.x86_64 39/680 Verifying : glibc-headers-x86-2.32.9000-26.fc34.noarch 40/680 Verifying : gnutls-3.6.15-2.fc34.x86_64 41/680 Verifying : google-droid-sans-fonts-20200215-8.fc34.noarch 42/680 Verifying : graphite2-1.3.14-6.fc34.x86_64 43/680 Verifying : graphviz-2.44.0-16.fc34.x86_64 44/680 Verifying : groff-base-1.22.4-4.fc34.x86_64 45/680 Verifying : gtk-update-icon-cache-3.24.24-2.fc34.x86_64 46/680 Verifying : gtk2-2.24.33-3.fc34.x86_64 47/680 Verifying : gts-0.7.6-38.20121130.fc33.x86_64 48/680 Verifying : harfbuzz-2.7.4-1.fc34.x86_64 49/680 Verifying : hicolor-icon-theme-0.17-9.fc33.noarch 50/680 Verifying : isl-0.16.1-12.fc33.x86_64 51/680 Verifying : jasper-libs-2.0.24-1.fc34.x86_64 52/680 Verifying : jbig2dec-libs-0.19-3.fc34.x86_64 53/680 Verifying : jbigkit-libs-2.1-20.fc34.x86_64 54/680 Verifying : jsoncpp-1.9.4-2.fc34.x86_64 55/680 Verifying : kernel-headers-5.11.0-0.rc5.git0.1.fc34.x86_64 56/680 Verifying : langpacks-core-font-en-3.0-6.fc34.noarch 57/680 Verifying : lasi-1.1.3-4.fc33.x86_64 58/680 Verifying : lcms2-2.11-2.fc33.x86_64 59/680 Verifying : libICE-1.0.10-5.fc34.x86_64 60/680 Verifying : libSM-1.2.3-7.fc34.x86_64 61/680 Verifying : libX11-1.7.0-2.fc34.x86_64 62/680 Verifying : libX11-common-1.7.0-2.fc34.noarch 63/680 Verifying : libXau-1.0.9-5.fc34.x86_64 64/680 Verifying : libXaw-1.0.13-16.fc34.x86_64 65/680 Verifying : libXcomposite-0.4.5-4.fc34.x86_64 66/680 Verifying : libXcursor-1.2.0-4.fc34.x86_64 67/680 Verifying : libXdamage-1.1.5-4.fc34.x86_64 68/680 Verifying : libXext-1.3.4-5.fc34.x86_64 69/680 Verifying : libXfixes-5.0.3-13.fc34.x86_64 70/680 Verifying : libXft-2.3.3-5.fc34.x86_64 71/680 Verifying : libXi-1.7.10-5.fc34.x86_64 72/680 Verifying : libXinerama-1.1.4-7.fc34.x86_64 73/680 Verifying : libXmu-1.1.3-5.fc34.x86_64 74/680 Verifying : libXpm-3.5.13-4.fc34.x86_64 75/680 Verifying : libXrandr-1.5.2-5.fc34.x86_64 76/680 Verifying : libXrender-0.9.10-13.fc34.x86_64 77/680 Verifying : libXt-1.2.0-3.fc34.x86_64 78/680 Verifying : libdatrie-0.2.9-13.fc34.x86_64 79/680 Verifying : libedit-3.1-33.20191231cvs.fc33.x86_64 80/680 Verifying : libevent-2.1.12-2.fc34.x86_64 81/680 Verifying : libfontenc-1.1.3-14.fc34.x86_64 82/680 Verifying : libgfortran-11.0.0-0.17.fc34.x86_64 83/680 Verifying : libgs-9.53.3-4.fc34.x86_64 84/680 Verifying : libicu-67.1-4.fc33.x86_64 85/680 Verifying : libijs-0.35-12.fc33.x86_64 86/680 Verifying : libimagequant-2.13.1-1.fc34.x86_64 87/680 Verifying : libjpeg-turbo-2.0.5-5.fc33.x86_64 88/680 Verifying : libmpc-1.2.1-1.fc34.x86_64 89/680 Verifying : libpaper-1.1.28-1.fc34.x86_64 90/680 Verifying : libpng-2:1.6.37-6.fc34.x86_64 91/680 Verifying : libquadmath-11.0.0-0.17.fc34.x86_64 92/680 Verifying : libraqm-0.7.0-6.fc33.x86_64 93/680 Verifying : librsvg2-2.50.2-1.fc34.x86_64 94/680 Verifying : libstdc++-devel-11.0.0-0.17.fc34.x86_64 95/680 Verifying : libthai-0.1.28-5.fc33.x86_64 96/680 Verifying : libtiff-4.1.0-6.fc34.x86_64 97/680 Verifying : libuv-1:1.40.0-1.fc34.x86_64 98/680 Verifying : libwebp-1.1.0-5.fc33.x86_64 99/680 Verifying : libxcb-1.13.1-6.fc34.x86_64 100/680 Verifying : libxcrypt-devel-4.4.17-1.fc34.x86_64 101/680 Verifying : libxslt-1.1.34-4.fc34.x86_64 102/680 Verifying : llvm-libs-11.1.0-0.2.rc2.fc34.x86_64 103/680 Verifying : mailcap-2.1.49-2.fc33.noarch 104/680 Verifying : maloc-1.5-21.fc33.x86_64 105/680 Verifying : maloc-devel-1.5-21.fc33.x86_64 106/680 Verifying : ncurses-6.2-3.20200222.fc33.x86_64 107/680 Verifying : netpbm-10.93.00-1.fc34.x86_64 108/680 Verifying : nettle-3.7-1.fc34.x86_64 109/680 Verifying : nspr-4.29.0-11.fc34.x86_64 110/680 Verifying : nss-3.60.1-3.fc34.x86_64 111/680 Verifying : nss-softokn-3.60.1-3.fc34.x86_64 112/680 Verifying : nss-softokn-freebl-3.60.1-3.fc34.x86_64 113/680 Verifying : nss-sysinit-3.60.1-3.fc34.x86_64 114/680 Verifying : nss-util-3.60.1-3.fc34.x86_64 115/680 Verifying : openblas-0.3.12-1.fc34.x86_64 116/680 Verifying : openblas-openmp-0.3.12-1.fc34.x86_64 117/680 Verifying : openjpeg2-2.4.0-1.fc34.x86_64 118/680 Verifying : pango-1.48.1-1.fc34.x86_64 119/680 Verifying : perl-Authen-SASL-2.16-22.fc33.noarch 120/680 Verifying : perl-AutoLoader-5.74-469.fc34.noarch 121/680 Verifying : perl-B-1.80-469.fc34.x86_64 122/680 Verifying : perl-B-Hooks-EndOfScope-0.24-12.fc33.noarch 123/680 Verifying : perl-Business-ISBN-3.006-1.fc34.noarch 124/680 Verifying : perl-Business-ISBN-Data-20210112.001-1.fc34.noar 125/680 Verifying : perl-Business-ISMN-1.201-7.fc33.noarch 126/680 Verifying : perl-Business-ISSN-1.004-3.fc33.noarch 127/680 Verifying : perl-Carp-1.50-457.fc33.noarch 128/680 Verifying : perl-Class-Accessor-0.51-10.fc33.noarch 129/680 Verifying : perl-Class-Data-Inheritable-0.08-36.fc33.noarch 130/680 Verifying : perl-Class-Inspector-1.36-4.fc33.noarch 131/680 Verifying : perl-Class-Method-Modifiers-2.13-5.fc33.noarch 132/680 Verifying : perl-Class-Singleton-1.6-1.fc34.noarch 133/680 Verifying : perl-Class-Struct-0.66-469.fc34.noarch 134/680 Verifying : perl-Clone-0.45-3.fc33.x86_64 135/680 Verifying : perl-Compress-Raw-Bzip2-2.100-1.fc34.x86_64 136/680 Verifying : perl-Compress-Raw-Zlib-2.100-1.fc34.x86_64 137/680 Verifying : perl-Convert-ASN1-0.27-21.fc34.noarch 138/680 Verifying : perl-Data-Compare-1.27-4.fc33.noarch 139/680 Verifying : perl-Data-Dump-1.23-15.fc33.noarch 140/680 Verifying : perl-Data-Dumper-2.174-459.fc34.x86_64 141/680 Verifying : perl-Data-OptList-0.110-14.fc33.noarch 142/680 Verifying : perl-Data-Uniqid-0.12-23.fc33.noarch 143/680 Verifying : perl-Date-ISO8601-0.005-10.fc33.noarch 144/680 Verifying : perl-Date-Manip-6.83-2.fc34.noarch 145/680 Verifying : perl-DateTime-2:1.54-1.fc34.x86_64 146/680 Verifying : perl-DateTime-Calendar-Julian-0.103-1.fc34.noarc 147/680 Verifying : perl-DateTime-Format-Builder-0.8300-1.fc33.noarc 148/680 Verifying : perl-DateTime-Format-Strptime-1:1.78-1.fc34.noar 149/680 Verifying : perl-DateTime-Locale-1.31-1.fc34.noarch 150/680 Verifying : perl-DateTime-TimeZone-2.47-1.fc34.noarch 151/680 Verifying : perl-DateTime-TimeZone-SystemV-0.010-11.fc33.noa 152/680 Verifying : perl-DateTime-TimeZone-Tzfile-0.011-11.fc33.noar 153/680 Verifying : perl-Devel-CallChecker-0.008-11.fc33.x86_64 154/680 Verifying : perl-Devel-Caller-2.06-23.fc33.x86_64 155/680 Verifying : perl-Devel-GlobalDestruction-0.14-13.fc33.noarch 156/680 Verifying : perl-Devel-LexAlias-0.05-24.fc33.x86_64 157/680 Verifying : perl-Devel-StackTrace-1:2.04-7.fc33.noarch 158/680 Verifying : perl-Digest-1.19-1.fc34.noarch 159/680 Verifying : perl-Digest-HMAC-1.03-26.fc33.noarch 160/680 Verifying : perl-Digest-MD5-2.58-1.fc34.x86_64 161/680 Verifying : perl-Digest-SHA-1:6.02-458.fc33.x86_64 162/680 Verifying : perl-Dist-CheckConflicts-0.11-20.fc33.noarch 163/680 Verifying : perl-DynaLoader-1.47-469.fc34.x86_64 164/680 Verifying : perl-DynaLoader-Functions-0.003-10.fc33.noarch 165/680 Verifying : perl-Email-Date-Format-1.005-17.fc33.noarch 166/680 Verifying : perl-Encode-4:3.08-458.fc34.x86_64 167/680 Verifying : perl-Encode-EUCJPASCII-0.03-31.fc33.x86_64 168/680 Verifying : perl-Encode-HanExtra-0.23-31.fc33.x86_64 169/680 Verifying : perl-Encode-JIS2K-0.03-16.fc33.x86_64 170/680 Verifying : perl-Encode-Locale-1.05-18.fc33.noarch 171/680 Verifying : perl-Errno-1.30-469.fc34.x86_64 172/680 Verifying : perl-Eval-Closure-0.14-13.fc33.noarch 173/680 Verifying : perl-Exception-Class-1.44-10.fc33.noarch 174/680 Verifying : perl-Exporter-5.74-458.fc33.noarch 175/680 Verifying : perl-Exporter-Tiny-1.002002-3.fc33.noarch 176/680 Verifying : perl-ExtUtils-MM-Utils-2:7.58-1.fc34.noarch 177/680 Verifying : perl-Fcntl-1.13-469.fc34.x86_64 178/680 Verifying : perl-File-Basename-2.85-469.fc34.noarch 179/680 Verifying : perl-File-Compare-1.100.600-469.fc34.noarch 180/680 Verifying : perl-File-Copy-2.34-469.fc34.noarch 181/680 Verifying : perl-File-Find-1.37-469.fc34.noarch 182/680 Verifying : perl-File-Find-Rule-0.34-16.fc33.noarch 183/680 Verifying : perl-File-Listing-6.14-1.fc34.noarch 184/680 Verifying : perl-File-Path-2.18-1.fc34.noarch 185/680 Verifying : perl-File-ShareDir-1.118-1.fc34.noarch 186/680 Verifying : perl-File-Slurper-0.012-9.fc33.noarch 187/680 Verifying : perl-File-Temp-1:0.231.100-1.fc34.noarch 188/680 Verifying : perl-File-stat-1.09-469.fc34.noarch 189/680 Verifying : perl-FileHandle-2.03-469.fc34.noarch 190/680 Verifying : perl-Filter-2:1.60-1.fc33.x86_64 191/680 Verifying : perl-FindBin-1.51-469.fc34.noarch 192/680 Verifying : perl-GSSAPI-0.28-32.fc33.x86_64 193/680 Verifying : perl-Getopt-Long-1:2.52-1.fc34.noarch 194/680 Verifying : perl-Getopt-Std-1.12-469.fc34.noarch 195/680 Verifying : perl-HTML-Parser-3.75-2.fc34.x86_64 196/680 Verifying : perl-HTML-Tagset-3.20-44.fc33.noarch 197/680 Verifying : perl-HTTP-Cookies-6.10-1.fc34.noarch 198/680 Verifying : perl-HTTP-Date-6.05-4.fc33.noarch 199/680 Verifying : perl-HTTP-Message-6.27-1.fc34.noarch 200/680 Verifying : perl-HTTP-Negotiate-6.01-27.fc33.noarch 201/680 Verifying : perl-HTTP-Tiny-0.076-457.fc33.noarch 202/680 Verifying : perl-Hash-Util-FieldHash-1.20-469.fc34.x86_64 203/680 Verifying : perl-I18N-LangTags-0.44-469.fc34.noarch 204/680 Verifying : perl-I18N-Langinfo-0.19-469.fc34.x86_64 205/680 Verifying : perl-IO-1.43-469.fc34.x86_64 206/680 Verifying : perl-IO-Compress-2.100-1.fc34.noarch 207/680 Verifying : perl-IO-HTML-1.004-1.fc34.noarch 208/680 Verifying : perl-IO-Socket-IP-0.41-2.fc34.noarch 209/680 Verifying : perl-IO-Socket-SSL-2.069-1.fc34.noarch 210/680 Verifying : perl-IO-String-1.08-40.fc33.noarch 211/680 Verifying : perl-IPC-Cmd-2:1.04-458.fc33.noarch 212/680 Verifying : perl-IPC-Open3-1.21-469.fc34.noarch 213/680 Verifying : perl-IPC-Run3-0.048-20.fc33.noarch 214/680 Verifying : perl-IPC-SysV-2.09-1.fc34.x86_64 215/680 Verifying : perl-JSON-4.03-1.fc34.noarch 216/680 Verifying : perl-LDAP-1:0.68-1.fc34.noarch 217/680 Verifying : perl-LWP-MediaTypes-6.04-6.fc33.noarch 218/680 Verifying : perl-LWP-Protocol-https-6.10-1.fc34.noarch 219/680 Verifying : perl-List-AllUtils-0.18-1.fc34.noarch 220/680 Verifying : perl-List-MoreUtils-0.430-1.fc34.noarch 221/680 Verifying : perl-List-MoreUtils-XS-0.430-1.fc34.x86_64 222/680 Verifying : perl-List-SomeUtils-0.58-4.fc33.noarch 223/680 Verifying : perl-List-UtilsBy-0.11-10.fc33.noarch 224/680 Verifying : perl-Locale-Maketext-1.29-458.fc33.noarch 225/680 Verifying : perl-Locale-Maketext-Simple-1:0.21-469.fc34.noar 226/680 Verifying : perl-Log-Dispatch-2.70-2.fc34.noarch 227/680 Verifying : perl-Log-Dispatch-FileRotate-1.36-7.fc33.noarch 228/680 Verifying : perl-Log-Log4perl-1.53-1.fc34.noarch 229/680 Verifying : perl-MIME-Base64-3.16-1.fc34.x86_64 230/680 Verifying : perl-MIME-Charset-1.012.2-12.fc33.noarch 231/680 Verifying : perl-MIME-Lite-3.031-4.fc33.noarch 232/680 Verifying : perl-MIME-Types-2.18-1.fc34.noarch 233/680 Verifying : perl-MRO-Compat-0.13-12.fc33.noarch 234/680 Verifying : perl-Mail-Sender-1:0.903-13.fc33.noarch 235/680 Verifying : perl-Mail-Sendmail-0.80-10.fc33.noarch 236/680 Verifying : perl-MailTools-2.21-6.fc33.noarch 237/680 Verifying : perl-Math-BigInt-1:1.9998.18-457.fc33.noarch 238/680 Verifying : perl-Math-Complex-1.59-469.fc34.noarch 239/680 Verifying : perl-Module-CoreList-1:5.20210123-1.fc34.noarch 240/680 Verifying : perl-Module-Implementation-0.09-27.fc33.noarch 241/680 Verifying : perl-Module-Load-1:0.36-1.fc34.noarch 242/680 Verifying : perl-Module-Load-Conditional-0.74-1.fc34.noarch 243/680 Verifying : perl-Module-Metadata-1.000037-457.fc33.noarch 244/680 Verifying : perl-Module-Runtime-0.016-10.fc33.noarch 245/680 Verifying : perl-Mozilla-CA-20200520-3.fc33.noarch 246/680 Verifying : perl-NTLM-1.09-27.fc33.noarch 247/680 Verifying : perl-Net-HTTP-6.20-1.fc34.noarch 248/680 Verifying : perl-Net-SMTP-SSL-1.04-13.fc33.noarch 249/680 Verifying : perl-Net-SSLeay-1.90-1.fc34.x86_64 250/680 Verifying : perl-Number-Compare-0.03-27.fc33.noarch 251/680 Verifying : perl-Opcode-1.48-469.fc34.x86_64 252/680 Verifying : perl-POSIX-1.94-469.fc34.x86_64 253/680 Verifying : perl-Package-Generator-1.106-20.fc34.noarch 254/680 Verifying : perl-Package-Stash-0.39-1.fc34.noarch 255/680 Verifying : perl-Package-Stash-XS-0.29-8.fc33.x86_64 256/680 Verifying : perl-PadWalker-2.5-1.fc34.x86_64 257/680 Verifying : perl-Params-Check-1:0.38-458.fc34.noarch 258/680 Verifying : perl-Params-Classify-0.015-11.fc33.x86_64 259/680 Verifying : perl-Params-Util-1.102-2.fc34.x86_64 260/680 Verifying : perl-Params-Validate-1.30-1.fc34.x86_64 261/680 Verifying : perl-Params-ValidationCompiler-0.30-9.fc33.noarc 262/680 Verifying : perl-Parse-RecDescent-1.967015-12.fc33.noarch 263/680 Verifying : perl-PathTools-3.78-458.fc34.x86_64 264/680 Verifying : perl-PerlIO-utf8_strict-0.008-1.fc34.x86_64 265/680 Verifying : perl-Pod-Escapes-1:1.07-457.fc33.noarch 266/680 Verifying : perl-Pod-Html-1.25-469.fc34.noarch 267/680 Verifying : perl-Pod-Perldoc-3.28.01-458.fc33.noarch 268/680 Verifying : perl-Pod-Simple-1:3.42-1.fc34.noarch 269/680 Verifying : perl-Pod-Usage-4:2.01-1.fc34.noarch 270/680 Verifying : perl-Ref-Util-0.204-9.fc33.noarch 271/680 Verifying : perl-Ref-Util-XS-0.117-10.fc33.x86_64 272/680 Verifying : perl-Regexp-Common-2017060201-13.fc33.noarch 273/680 Verifying : perl-Role-Tiny-2.002004-1.fc34.noarch 274/680 Verifying : perl-Safe-2.41-469.fc34.noarch 275/680 Verifying : perl-Scalar-List-Utils-4:1.55-457.fc33.x86_64 276/680 Verifying : perl-SelectSaver-1.02-469.fc34.noarch 277/680 Verifying : perl-Socket-4:2.031-1.fc34.x86_64 278/680 Verifying : perl-Sort-Key-1.33-19.fc33.x86_64 279/680 Verifying : perl-Specio-0.46-4.fc33.noarch 280/680 Verifying : perl-Storable-1:3.21-457.fc33.x86_64 281/680 Verifying : perl-Sub-Exporter-0.987-24.fc33.noarch 282/680 Verifying : perl-Sub-Exporter-Progressive-0.001013-13.fc33.n 283/680 Verifying : perl-Sub-Identify-0.14-14.fc33.x86_64 284/680 Verifying : perl-Sub-Install-0.928-25.fc33.noarch 285/680 Verifying : perl-Symbol-1.08-469.fc34.noarch 286/680 Verifying : perl-Sys-Hostname-1.23-469.fc34.x86_64 287/680 Verifying : perl-Sys-Syslog-0.36-458.fc33.x86_64 288/680 Verifying : perl-Term-ANSIColor-5.01-458.fc33.noarch 289/680 Verifying : perl-Term-Cap-1.17-457.fc33.noarch 290/680 Verifying : perl-Text-Balanced-2.04-1.fc34.noarch 291/680 Verifying : perl-Text-BibTeX-0.88-6.fc33.x86_64 292/680 Verifying : perl-Text-CSV-2.00-5.fc33.noarch 293/680 Verifying : perl-Text-Glob-0.11-12.fc33.noarch 294/680 Verifying : perl-Text-ParseWords-3.30-457.fc33.noarch 295/680 Verifying : perl-Text-Roman-3.5-17.fc33.noarch 296/680 Verifying : perl-Text-Soundex-3.05-17.fc33.x86_64 297/680 Verifying : perl-Text-Tabs+Wrap-2013.0523-457.fc33.noarch 298/680 Verifying : perl-Text-Unidecode-1.30-13.fc33.noarch 299/680 Verifying : perl-Tie-4.6-469.fc34.noarch 300/680 Verifying : perl-Tie-Cycle-1.226-1.fc34.noarch 301/680 Verifying : perl-Time-HiRes-4:1.9764-459.fc34.x86_64 302/680 Verifying : perl-Time-Local-2:1.300-4.fc33.noarch 303/680 Verifying : perl-TimeDate-1:2.33-3.fc33.noarch 304/680 Verifying : perl-Try-Tiny-0.30-10.fc33.noarch 305/680 Verifying : perl-URI-5.06-1.fc34.noarch 306/680 Verifying : perl-Unicode-Collate-1.29-1.fc34.x86_64 307/680 Verifying : perl-Unicode-LineBreak-2019.001-8.fc33.x86_64 308/680 Verifying : perl-Unicode-Normalize-1.27-458.fc33.x86_64 309/680 Verifying : perl-Unicode-UCD-0.75-469.fc34.noarch 310/680 Verifying : perl-Variable-Magic-0.62-11.fc33.x86_64 311/680 Verifying : perl-WWW-RobotRules-6.02-27.fc34.noarch 312/680 Verifying : perl-XML-LibXML-1:2.0206-2.fc34.x86_64 313/680 Verifying : perl-XML-LibXML-Simple-1.01-4.fc33.noarch 314/680 Verifying : perl-XML-LibXSLT-1.99-4.fc33.x86_64 315/680 Verifying : perl-XML-NamespaceSupport-1.12-12.fc33.noarch 316/680 Verifying : perl-XML-Parser-2.46-6.fc33.x86_64 317/680 Verifying : perl-XML-SAX-1.02-5.fc33.noarch 318/680 Verifying : perl-XML-SAX-Base-1.09-12.fc33.noarch 319/680 Verifying : perl-XML-Writer-0.900-2.fc34.noarch 320/680 Verifying : perl-XML-XPath-1.44-8.fc34.noarch 321/680 Verifying : perl-XString-0.005-1.fc34.x86_64 322/680 Verifying : perl-autovivification-0.18-11.fc33.x86_64 323/680 Verifying : perl-base-2.27-469.fc34.noarch 324/680 Verifying : perl-constant-1.33-458.fc33.noarch 325/680 Verifying : perl-deprecate-0.04-469.fc34.noarch 326/680 Verifying : perl-encoding-4:3.00-458.fc34.x86_64 327/680 Verifying : perl-if-0.60.800-469.fc34.noarch 328/680 Verifying : perl-interpreter-4:5.32.1-469.fc34.x86_64 329/680 Verifying : perl-lib-0.65-469.fc34.x86_64 330/680 Verifying : perl-libnet-3.13-1.fc34.noarch 331/680 Verifying : perl-libs-4:5.32.1-469.fc34.x86_64 332/680 Verifying : perl-libwww-perl-6.52-1.fc34.noarch 333/680 Verifying : perl-locale-1.09-469.fc34.noarch 334/680 Verifying : perl-meta-notation-5.32.1-469.fc34.noarch 335/680 Verifying : perl-mro-1.23-469.fc34.x86_64 336/680 Verifying : perl-namespace-autoclean-0.29-5.fc33.noarch 337/680 Verifying : perl-namespace-clean-0.27-15.fc33.noarch 338/680 Verifying : perl-open-1.12-469.fc34.noarch 339/680 Verifying : perl-overload-1.31-469.fc34.noarch 340/680 Verifying : perl-overloading-0.02-469.fc34.noarch 341/680 Verifying : perl-parent-1:0.238-457.fc33.noarch 342/680 Verifying : perl-podlators-1:4.14-457.fc33.noarch 343/680 Verifying : perl-sigtrap-1.09-469.fc34.noarch 344/680 Verifying : perl-subs-1.03-469.fc34.noarch 345/680 Verifying : perl-vars-1.05-469.fc34.noarch 346/680 Verifying : perl-version-7:0.99.28-1.fc34.x86_64 347/680 Verifying : perltidy-20210111-1.fc34.noarch 348/680 Verifying : pixman-0.40.0-2.fc33.x86_64 349/680 Verifying : poppler-21.01.0-1.fc34.x86_64 350/680 Verifying : poppler-data-0.4.9-6.fc33.noarch 351/680 Verifying : python-pip-wheel-21.0-1.fc34.noarch 352/680 Verifying : python-rpm-macros-3.9-11.fc34.noarch 353/680 Verifying : python-setuptools-wheel-52.0.0-1.fc34.noarch 354/680 Verifying : python3-3.9.1-4.fc34.x86_64 355/680 Verifying : python3-babel-2.9.0-3.fc34.noarch 356/680 Verifying : python3-chardet-3.0.4-18.fc33.noarch 357/680 Verifying : python3-devel-3.9.1-4.fc34.x86_64 358/680 Verifying : python3-docutils-0.16-3.fc33.noarch 359/680 Verifying : python3-idna-2.10-2.fc33.noarch 360/680 Verifying : python3-imagesize-1.2.0-3.fc34.noarch 361/680 Verifying : python3-jinja2-2.11.2-7.fc34.noarch 362/680 Verifying : python3-libs-3.9.1-4.fc34.x86_64 363/680 Verifying : python3-markupsafe-1.1.1-9.fc34.x86_64 364/680 Verifying : python3-numpy-1:1.20.0-0.1.rc2.fc34.x86_64 365/680 Verifying : python3-packaging-20.8-1.fc34.noarch 366/680 Verifying : python3-pyparsing-2.4.7-4.fc33.noarch 367/680 Verifying : python3-pysocks-1.7.1-7.fc33.noarch 368/680 Verifying : python3-pytz-2020.5-1.fc34.noarch 369/680 Verifying : python3-requests-2.25.0-1.fc34.noarch 370/680 Verifying : python3-rpm-generators-11-12.fc34.noarch 371/680 Verifying : python3-rpm-macros-3.9-11.fc34.noarch 372/680 Verifying : python3-setuptools-52.0.0-1.fc34.noarch 373/680 Verifying : python3-six-1.15.0-3.fc34.noarch 374/680 Verifying : python3-snowballstemmer-1.9.0-7.fc33.noarch 375/680 Verifying : python3-sphinx-1:3.4.3-1.fc34.noarch 376/680 Verifying : python3-sphinx-theme-alabaster-0.7.12-10.fc33.no 377/680 Verifying : python3-sphinxcontrib-applehelp-1.0.2-2.fc33.noa 378/680 Verifying : python3-sphinxcontrib-devhelp-1.0.2-2.fc33.noarc 379/680 Verifying : python3-sphinxcontrib-htmlhelp-1.0.3-2.fc33.noar 380/680 Verifying : python3-sphinxcontrib-jsmath-1.0.1-9.fc33.noarch 381/680 Verifying : python3-sphinxcontrib-qthelp-1.0.3-2.fc33.noarch 382/680 Verifying : python3-sphinxcontrib-serializinghtml-1.1.4-2.fc 383/680 Verifying : python3-urllib3-1.25.10-3.fc34.noarch 384/680 Verifying : rhash-1.4.0-2.fc33.x86_64 385/680 Verifying : shared-mime-info-2.1-1.fc34.x86_64 386/680 Verifying : sombok-2.4.0-13.fc33.x86_64 387/680 Verifying : swig-4.0.2-3.fc34.x86_64 388/680 Verifying : teckit-2.5.9-5.fc33.x86_64 389/680 Verifying : texlive-ae-9:svn15878.1.4-36.fc34.noarch 390/680 Verifying : texlive-algorithms-9:svn42428-36.fc34.noarch 391/680 Verifying : texlive-alphalph-9:svn53087-36.fc34.noarch 392/680 Verifying : texlive-amscls-9:svn46099-36.fc34.noarch 393/680 Verifying : texlive-amsfonts-9:svn29208.3.04-36.fc34.noarch 394/680 Verifying : texlive-amsmath-9:svn53640-36.fc34.noarch 395/680 Verifying : texlive-anysize-9:svn15878.0-36.fc34.noarch 396/680 Verifying : texlive-atbegshi-9:svn53051-36.fc34.noarch 397/680 Verifying : texlive-attachfile-9:svn42099-36.fc34.noarch 398/680 Verifying : texlive-attachfile2-9:20200327-25.fc34.noarch 399/680 Verifying : texlive-atveryend-9:svn53108-36.fc34.noarch 400/680 Verifying : texlive-auto-pst-pdf-9:svn52849-36.fc34.noarch 401/680 Verifying : texlive-auxhook-9:svn53173-36.fc34.noarch 402/680 Verifying : texlive-avantgar-9:svn31835.0-36.fc34.noarch 403/680 Verifying : texlive-babel-english-9:svn44495-36.fc34.noarch 404/680 Verifying : texlive-babel-9:svn54487-36.fc34.noarch 405/680 Verifying : texlive-babelbib-9:svn50354-36.fc34.noarch 406/680 Verifying : texlive-base-9:20200327-25.fc34.x86_64 407/680 Verifying : texlive-beamer-9:svn54841-36.fc34.noarch 408/680 Verifying : texlive-bera-9:svn20031.0-36.fc34.noarch 409/680 Verifying : texlive-beton-9:svn15878.0-36.fc34.noarch 410/680 Verifying : texlive-biblatex-9:svn53063-36.fc34.noarch 411/680 Verifying : texlive-bibtex-9:20200327-25.fc34.x86_64 412/680 Verifying : texlive-bidi-9:svn53615-36.fc34.noarch 413/680 Verifying : texlive-bigintcalc-9:svn53172-36.fc34.noarch 414/680 Verifying : texlive-bitset-9:svn53837-36.fc34.noarch 415/680 Verifying : texlive-bookman-9:svn31835.0-36.fc34.noarch 416/680 Verifying : texlive-bookmark-9:svn53026-36.fc34.noarch 417/680 Verifying : texlive-booktabs-9:svn53402-36.fc34.noarch 418/680 Verifying : texlive-breakurl-9:svn29901.1.40-36.fc34.noarch 419/680 Verifying : texlive-breqn-9:svn54801-36.fc34.noarch 420/680 Verifying : texlive-caption-9:svn53517-36.fc34.noarch 421/680 Verifying : texlive-carlisle-9:svn47876-36.fc34.noarch 422/680 Verifying : texlive-catchfile-9:svn53084-36.fc34.noarch 423/680 Verifying : texlive-changepage-9:svn15878.1.0c-36.fc34.noarc 424/680 Verifying : texlive-charter-9:svn15878.0-36.fc34.noarch 425/680 Verifying : texlive-cite-9:svn36428.5.5-36.fc34.noarch 426/680 Verifying : texlive-cm-super-9:svn15878.0-36.fc34.noarch 427/680 Verifying : texlive-cm-9:svn49028-36.fc34.noarch 428/680 Verifying : texlive-cmap-9:svn42428-36.fc34.noarch 429/680 Verifying : texlive-cmextra-9:svn42428-36.fc34.noarch 430/680 Verifying : texlive-collection-basic-9:svn54186-36.fc34.noar 431/680 Verifying : texlive-collection-fontsrecommended-9:svn54074-3 432/680 Verifying : texlive-collection-latex-9:svn54074-36.fc34.noar 433/680 Verifying : texlive-collection-latexrecommended-9:svn54074-3 434/680 Verifying : texlive-colorprofiles-9:svn49086-36.fc34.noarch 435/680 Verifying : texlive-colortbl-9:svn53545-36.fc34.noarch 436/680 Verifying : texlive-courier-9:svn35058.0-36.fc34.noarch 437/680 Verifying : texlive-crop-9:svn15878.1.5-36.fc34.noarch 438/680 Verifying : texlive-csquotes-9:svn53041-36.fc34.noarch 439/680 Verifying : texlive-ctable-9:svn38672-36.fc34.noarch 440/680 Verifying : texlive-ctablestack-9:svn38514-36.fc34.noarch 441/680 Verifying : texlive-currfile-9:svn40725-36.fc34.noarch 442/680 Verifying : texlive-dehyph-9:svn48599-36.fc34.noarch 443/680 Verifying : texlive-dvipdfmx-9:20200327-25.fc34.x86_64 444/680 Verifying : texlive-dvips-9:20200327-25.fc34.x86_64 445/680 Verifying : texlive-ec-9:svn25033.1.0-36.fc34.noarch 446/680 Verifying : texlive-enctex-9:svn34957.0-36.fc34.noarch 447/680 Verifying : texlive-enumitem-9:svn51423-36.fc34.noarch 448/680 Verifying : texlive-epstopdf-pkg-9:svn53546-36.fc34.noarch 449/680 Verifying : texlive-eso-pic-9:svn47694-36.fc34.noarch 450/680 Verifying : texlive-etex-pkg-9:svn41784-36.fc34.noarch 451/680 Verifying : texlive-etex-9:svn37057.0-36.fc34.noarch 452/680 Verifying : texlive-etexcmds-9:svn53171-36.fc34.noarch 453/680 Verifying : texlive-etoolbox-9:svn52153-36.fc34.noarch 454/680 Verifying : texlive-euenc-9:svn19795.0.1h-36.fc34.noarch 455/680 Verifying : texlive-euler-9:svn42428-36.fc34.noarch 456/680 Verifying : texlive-euro-ce-9:svn25714-36.fc34.noarch 457/680 Verifying : texlive-euro-9:svn22191.1.1-36.fc34.noarch 458/680 Verifying : texlive-eurosym-9:svn17265.1.4_subrfix-36.fc34.n 459/680 Verifying : texlive-extsizes-9:svn17263.1.4a-36.fc34.noarch 460/680 Verifying : texlive-fancybox-9:svn18304.1.4-36.fc34.noarch 461/680 Verifying : texlive-fancyhdr-9:svn49886-36.fc34.noarch 462/680 Verifying : texlive-fancyref-9:svn15878.0.9c-36.fc34.noarch 463/680 Verifying : texlive-fancyvrb-9:svn53392-36.fc34.noarch 464/680 Verifying : texlive-filecontents-9:svn52142-36.fc34.noarch 465/680 Verifying : texlive-filehook-9:svn53655-36.fc34.noarch 466/680 Verifying : texlive-finstrut-9:svn21719.0.5-36.fc34.noarch 467/680 Verifying : texlive-fix2col-9:svn38770-36.fc34.noarch 468/680 Verifying : texlive-float-9:svn15878.1.3d-36.fc34.noarch 469/680 Verifying : texlive-fontspec-9:svn53860-36.fc34.noarch 470/680 Verifying : texlive-footmisc-9:svn23330.5.5b-36.fc34.noarch 471/680 Verifying : texlive-footnotehyper-9:svn52676-36.fc34.noarch 472/680 Verifying : texlive-fp-9:svn49719-36.fc34.noarch 473/680 Verifying : texlive-fpl-9:svn54512-36.fc34.noarch 474/680 Verifying : texlive-geometry-9:svn54080-36.fc34.noarch 475/680 Verifying : texlive-gettitlestring-9:svn53170-36.fc34.noarch 476/680 Verifying : texlive-glyphlist-9:20200327-25.fc34.noarch 477/680 Verifying : texlive-graphics-cfg-9:svn41448-36.fc34.noarch 478/680 Verifying : texlive-graphics-def-9:svn54522-36.fc34.noarch 479/680 Verifying : texlive-graphics-9:svn53640-36.fc34.noarch 480/680 Verifying : texlive-grfext-9:svn53024-36.fc34.noarch 481/680 Verifying : texlive-grffile-9:svn52756-36.fc34.noarch 482/680 Verifying : texlive-helvetic-9:svn31835.0-36.fc34.noarch 483/680 Verifying : texlive-hobsub-9:svn52810-36.fc34.noarch 484/680 Verifying : texlive-hologo-9:svn53048-36.fc34.noarch 485/680 Verifying : texlive-hycolor-9:svn53584-36.fc34.noarch 486/680 Verifying : texlive-hyperref-9:svn54841-36.fc34.noarch 487/680 Verifying : texlive-hyph-utf8-9:svn54568-36.fc34.noarch 488/680 Verifying : texlive-hyphen-base-9:svn54763-36.fc34.noarch 489/680 Verifying : texlive-hyphenex-9:svn37354.0-36.fc34.noarch 490/680 Verifying : texlive-ifmtarg-9:svn47544-36.fc34.noarch 491/680 Verifying : texlive-ifplatform-9:svn45533-36.fc34.noarch 492/680 Verifying : texlive-iftex-9:svn54159-36.fc34.noarch 493/680 Verifying : texlive-index-9:svn24099.4.1beta-36.fc34.noarch 494/680 Verifying : texlive-infwarerr-9:svn53023-36.fc34.noarch 495/680 Verifying : texlive-intcalc-9:svn53168-36.fc34.noarch 496/680 Verifying : texlive-jknapltx-9:svn19440.0-36.fc34.noarch 497/680 Verifying : texlive-kastrup-9:svn15878.0-36.fc34.noarch 498/680 Verifying : texlive-knuth-lib-9:svn35820.0-36.fc34.noarch 499/680 Verifying : texlive-knuth-local-9:svn38627-36.fc34.noarch 500/680 Verifying : texlive-koma-script-9:svn54825-36.fc34.noarch 501/680 Verifying : texlive-kpathsea-9:20200327-25.fc34.x86_64 502/680 Verifying : texlive-kvdefinekeys-9:svn53193-36.fc34.noarch 503/680 Verifying : texlive-kvoptions-9:svn52985-36.fc34.noarch 504/680 Verifying : texlive-kvsetkeys-9:svn53166-36.fc34.noarch 505/680 Verifying : texlive-l3backend-9:svn54259-36.fc34.noarch 506/680 Verifying : texlive-l3experimental-9:svn53394-36.fc34.noarch 507/680 Verifying : texlive-l3kernel-9:svn54672-36.fc34.noarch 508/680 Verifying : texlive-l3packages-9:svn54131-36.fc34.noarch 509/680 Verifying : texlive-latex-9:20200327-25.fc34.noarch 510/680 Verifying : texlive-latex-fonts-9:svn28888.0-36.fc34.noarch 511/680 Verifying : texlive-latexbug-9:svn52414-36.fc34.noarch 512/680 Verifying : texlive-latexconfig-9:svn53525-36.fc34.noarch 513/680 Verifying : texlive-letltxmacro-9:svn53022-36.fc34.noarch 514/680 Verifying : texlive-lib-9:20200327-25.fc34.x86_64 515/680 Verifying : texlive-lineno-9:svn21442.4.41-36.fc34.noarch 516/680 Verifying : texlive-listings-9:svn54554-36.fc34.noarch 517/680 Verifying : texlive-lm-math-9:svn36915.1.959-36.fc34.noarch 518/680 Verifying : texlive-lm-9:svn48145-36.fc34.noarch 519/680 Verifying : texlive-logreq-9:svn53003-36.fc34.noarch 520/680 Verifying : texlive-ltabptch-9:svn17533.1.74d-36.fc34.noarch 521/680 Verifying : texlive-ltxcmds-9:svn53165-36.fc34.noarch 522/680 Verifying : texlive-ltxmisc-9:svn21927.0-36.fc34.noarch 523/680 Verifying : texlive-lua-alt-getopt-9:svn29349.0.7.0-36.fc34. 524/680 Verifying : texlive-luabidi-9:svn54512-36.fc34.noarch 525/680 Verifying : texlive-luahbtex-9:20200327-25.fc34.x86_64 526/680 Verifying : texlive-lualatex-math-9:svn52663-36.fc34.noarch 527/680 Verifying : texlive-lualibs-9:svn53682-36.fc34.noarch 528/680 Verifying : texlive-luaotfload-9:20200327-25.fc34.noarch 529/680 Verifying : texlive-luatex-9:20200327-25.fc34.x86_64 530/680 Verifying : texlive-luatexbase-9:svn52663-36.fc34.noarch 531/680 Verifying : texlive-lwarp-9:20200327-25.fc34.noarch 532/680 Verifying : texlive-makecmds-9:svn15878.0-36.fc34.noarch 533/680 Verifying : texlive-makeindex-9:20200327-25.fc34.x86_64 534/680 Verifying : texlive-manfnt-font-9:svn54684-36.fc34.noarch 535/680 Verifying : texlive-marginnote-9:svn48383-36.fc34.noarch 536/680 Verifying : texlive-marvosym-9:svn29349.2.2a-36.fc34.noarch 537/680 Verifying : texlive-mathpazo-9:svn52663-36.fc34.noarch 538/680 Verifying : texlive-mathspec-9:svn42773-36.fc34.noarch 539/680 Verifying : texlive-mathtools-9:svn54516-36.fc34.noarch 540/680 Verifying : texlive-mdwtools-9:svn15878.1.05.4-36.fc34.noarc 541/680 Verifying : texlive-memoir-9:svn54554-36.fc34.noarch 542/680 Verifying : texlive-metafont-9:20200327-25.fc34.x86_64 543/680 Verifying : texlive-metalogo-9:svn18611.0.12-36.fc34.noarch 544/680 Verifying : texlive-mflogo-font-9:svn54512-36.fc34.noarch 545/680 Verifying : texlive-mflogo-9:svn42428-36.fc34.noarch 546/680 Verifying : texlive-mfnfss-9:svn46036-36.fc34.noarch 547/680 Verifying : texlive-mfware-9:20200327-25.fc34.x86_64 548/680 Verifying : texlive-microtype-9:svn52853-36.fc34.noarch 549/680 Verifying : texlive-minitoc-9:svn48196-36.fc34.noarch 550/680 Verifying : texlive-mnsymbol-9:svn18651.1.4-36.fc34.noarch 551/680 Verifying : texlive-modes-9:svn53604-36.fc34.noarch 552/680 Verifying : texlive-mparhack-9:svn15878.1.4-36.fc34.noarch 553/680 Verifying : texlive-mptopdf-9:20200327-25.fc34.noarch 554/680 Verifying : texlive-ms-9:svn51784-36.fc34.noarch 555/680 Verifying : texlive-multido-9:svn18302.1.42-36.fc34.noarch 556/680 Verifying : texlive-natbib-9:svn20668.8.31b-36.fc34.noarch 557/680 Verifying : texlive-ncntrsbk-9:svn31835.0-36.fc34.noarch 558/680 Verifying : texlive-newfloat-9:svn52906-36.fc34.noarch 559/680 Verifying : texlive-notoccite-9:svn18129.0-36.fc34.noarch 560/680 Verifying : texlive-ntgclass-9:svn53882-36.fc34.noarch 561/680 Verifying : texlive-oberdiek-9:20200327-25.fc34.noarch 562/680 Verifying : texlive-palatino-9:svn31835.0-36.fc34.noarch 563/680 Verifying : texlive-paralist-9:svn43021-36.fc34.noarch 564/680 Verifying : texlive-parallel-9:svn15878.0-36.fc34.noarch 565/680 Verifying : texlive-parskip-9:svn53503-36.fc34.noarch 566/680 Verifying : texlive-pdfcolmk-9:svn52912-36.fc34.noarch 567/680 Verifying : texlive-pdfescape-9:svn53082-36.fc34.noarch 568/680 Verifying : texlive-pdflscape-9:svn53047-36.fc34.noarch 569/680 Verifying : texlive-pdfpages-9:svn53583-36.fc34.noarch 570/680 Verifying : texlive-pdftex-9:20200327-25.fc34.x86_64 571/680 Verifying : texlive-pdftexcmds-9:svn52913-36.fc34.noarch 572/680 Verifying : texlive-pgf-9:svn54512-36.fc34.noarch 573/680 Verifying : texlive-picture-9:svn54867-36.fc34.noarch 574/680 Verifying : texlive-placeins-9:svn19848.2.2-36.fc34.noarch 575/680 Verifying : texlive-plain-9:svn43076-36.fc34.noarch 576/680 Verifying : texlive-polyglossia-9:svn54758-36.fc34.noarch 577/680 Verifying : texlive-psfrag-9:svn15878.3.04-36.fc34.noarch 578/680 Verifying : texlive-pslatex-9:svn16416.0-36.fc34.noarch 579/680 Verifying : texlive-psnfss-9:svn54694-36.fc34.noarch 580/680 Verifying : texlive-pspicture-9:svn15878.0-36.fc34.noarch 581/680 Verifying : texlive-pst-3d-9:svn17257.1.10-36.fc34.noarch 582/680 Verifying : texlive-pst-coil-9:svn37377.1.07-36.fc34.noarch 583/680 Verifying : texlive-pst-eps-9:svn15878.1.0-36.fc34.noarch 584/680 Verifying : texlive-pst-fill-9:svn15878.1.01-36.fc34.noarch 585/680 Verifying : texlive-pst-grad-9:svn15878.1.06-36.fc34.noarch 586/680 Verifying : texlive-pst-math-9:svn49425-36.fc34.noarch 587/680 Verifying : texlive-pst-node-9:svn54687-36.fc34.noarch 588/680 Verifying : texlive-pst-ovl-9:svn45506-36.fc34.noarch 589/680 Verifying : texlive-pst-plot-9:svn54080-36.fc34.noarch 590/680 Verifying : texlive-pst-text-9:svn49542-36.fc34.noarch 591/680 Verifying : texlive-pst-tools-9:svn54518-36.fc34.noarch 592/680 Verifying : texlive-pst-tree-9:svn43272-36.fc34.noarch 593/680 Verifying : texlive-pstricks-add-9:svn53763-36.fc34.noarch 594/680 Verifying : texlive-pstricks-9:svn54080-36.fc34.noarch 595/680 Verifying : texlive-pxfonts-9:svn15878.0-36.fc34.noarch 596/680 Verifying : texlive-qstest-9:svn15878.0-36.fc34.noarch 597/680 Verifying : texlive-ragged2e-9:svn51780-36.fc34.noarch 598/680 Verifying : texlive-rcs-9:svn15878.0-36.fc34.noarch 599/680 Verifying : texlive-realscripts-9:svn39706-36.fc34.noarch 600/680 Verifying : texlive-refcount-9:svn53164-36.fc34.noarch 601/680 Verifying : texlive-rerunfilecheck-9:svn54841-36.fc34.noarch 602/680 Verifying : texlive-rsfs-9:svn15878.0-36.fc34.noarch 603/680 Verifying : texlive-sansmath-9:svn17997.1.1-36.fc34.noarch 604/680 Verifying : texlive-sansmathaccent-9:svn53628-36.fc34.noarch 605/680 Verifying : texlive-sauerj-9:svn15878.0-36.fc34.noarch 606/680 Verifying : texlive-section-9:svn20180.0-36.fc34.noarch 607/680 Verifying : texlive-seminar-9:svn34011.1.62-36.fc34.noarch 608/680 Verifying : texlive-sepnum-9:svn20186.2.0-36.fc34.noarch 609/680 Verifying : texlive-setspace-9:svn24881.6.7a-36.fc34.noarch 610/680 Verifying : texlive-showexpl-9:svn42677-36.fc34.noarch 611/680 Verifying : texlive-soul-9:svn15878.2.4-36.fc34.noarch 612/680 Verifying : texlive-stringenc-9:svn52982-36.fc34.noarch 613/680 Verifying : texlive-subfig-9:svn15878.1.3-36.fc34.noarch 614/680 Verifying : texlive-symbol-9:svn31835.0-36.fc34.noarch 615/680 Verifying : texlive-tex-9:20200327-25.fc34.x86_64 616/680 Verifying : texlive-tex-gyre-math-9:svn41264-36.fc34.noarch 617/680 Verifying : texlive-tex-gyre-9:svn48058-36.fc34.noarch 618/680 Verifying : texlive-tex-ini-files-9:svn40533-36.fc34.noarch 619/680 Verifying : texlive-texlive-common-doc-9:svn54176-36.fc34.no 620/680 Verifying : texlive-texlive-docindex-9:svn54903-36.fc34.noar 621/680 Verifying : texlive-texlive-en-9:20200327-25.fc34.noarch 622/680 Verifying : texlive-texlive-msg-translations-9:svn54919-36.f 623/680 Verifying : texlive-texlive-scripts-9:20200327-25.fc34.noarc 624/680 Verifying : texlive-texlive.infra-9:20200327-25.fc34.noarch 625/680 Verifying : texlive-textcase-9:svn52092-36.fc34.noarch 626/680 Verifying : texlive-thumbpdf-9:20200327-25.fc34.noarch 627/680 Verifying : texlive-times-9:svn35058.0-36.fc34.noarch 628/680 Verifying : texlive-tipa-9:svn29349.1.3-36.fc34.noarch 629/680 Verifying : texlive-titlesec-9:svn52413-36.fc34.noarch 630/680 Verifying : texlive-tools-9:svn53640-36.fc34.noarch 631/680 Verifying : texlive-translator-9:svn54512-36.fc34.noarch 632/680 Verifying : texlive-transparent-9:svn52981-36.fc34.noarch 633/680 Verifying : texlive-txfonts-9:svn15878.0-36.fc34.noarch 634/680 Verifying : texlive-typehtml-9:svn17134.0-36.fc34.noarch 635/680 Verifying : texlive-ucharcat-9:svn38907-36.fc34.noarch 636/680 Verifying : texlive-ucs-9:svn35853.2.2-36.fc34.noarch 637/680 Verifying : texlive-underscore-9:svn18261.0-36.fc34.noarch 638/680 Verifying : texlive-unicode-data-9:svn54758-36.fc34.noarch 639/680 Verifying : texlive-unicode-math-9:svn53609-36.fc34.noarch 640/680 Verifying : texlive-uniquecounter-9:svn53162-36.fc34.noarch 641/680 Verifying : texlive-updmap-map-9:svn56618-36.fc34.noarch 642/680 Verifying : texlive-url-9:svn32528.3.4-36.fc34.noarch 643/680 Verifying : texlive-utopia-9:svn15878.0-36.fc34.noarch 644/680 Verifying : texlive-varwidth-9:svn24104.0.92-36.fc34.noarch 645/680 Verifying : texlive-wasy-9:svn53533-36.fc34.noarch 646/680 Verifying : texlive-wasy-type1-9:svn53534-36.fc34.noarch 647/680 Verifying : texlive-wasysym-9:svn54080-36.fc34.noarch 648/680 Verifying : texlive-xcolor-9:svn41044-36.fc34.noarch 649/680 Verifying : texlive-xdvi-9:20200327-25.fc34.x86_64 650/680 Verifying : texlive-xetex-9:20200327-25.fc34.x86_64 651/680 Verifying : texlive-xetexconfig-9:svn45845-36.fc34.noarch 652/680 Verifying : texlive-xifthen-9:svn38929-36.fc34.noarch 653/680 Verifying : texlive-xkeyval-9:svn35741.2.7a-36.fc34.noarch 654/680 Verifying : texlive-xltxtra-9:svn49555-36.fc34.noarch 655/680 Verifying : texlive-xpatch-9:svn54563-36.fc34.noarch 656/680 Verifying : texlive-xstring-9:svn49946-36.fc34.noarch 657/680 Verifying : texlive-xunicode-9:svn30466.0.981-36.fc34.noarch 658/680 Verifying : texlive-zapfchan-9:svn31835.0-36.fc34.noarch 659/680 Verifying : texlive-zapfding-9:svn31835.0-36.fc34.noarch 660/680 Verifying : texlive-zref-9:svn54098-36.fc34.noarch 661/680 Verifying : urw-base35-bookman-fonts-20200910-2.fc34.noarch 662/680 Verifying : urw-base35-c059-fonts-20200910-2.fc34.noarch 663/680 Verifying : urw-base35-d050000l-fonts-20200910-2.fc34.noarch 664/680 Verifying : urw-base35-fonts-20200910-2.fc34.noarch 665/680 Verifying : urw-base35-fonts-common-20200910-2.fc34.noarch 666/680 Verifying : urw-base35-gothic-fonts-20200910-2.fc34.noarch 667/680 Verifying : urw-base35-nimbus-mono-ps-fonts-20200910-2.fc34. 668/680 Verifying : urw-base35-nimbus-roman-fonts-20200910-2.fc34.no 669/680 Verifying : urw-base35-nimbus-sans-fonts-20200910-2.fc34.noa 670/680 Verifying : urw-base35-p052-fonts-20200910-2.fc34.noarch 671/680 Verifying : urw-base35-standard-symbols-ps-fonts-20200910-2. 672/680 Verifying : urw-base35-z003-fonts-20200910-2.fc34.noarch 673/680 Verifying : vim-filesystem-2:8.2.2311-1.fc34.noarch 674/680 Verifying : xapian-core-libs-1.4.17-2.fc34.x86_64 675/680 Verifying : xml-common-0.6.3-55.fc33.noarch 676/680 Verifying : xorg-x11-font-utils-1:7.5-47.fc34.x86_64 677/680 Verifying : xorg-x11-fonts-ISO8859-1-100dpi-7.5-26.fc34.noar 678/680 Verifying : zlib-devel-1.2.11-23.fc34.x86_64 679/680 Verifying : zziplib-0.13.71-1.fc34.x86_64 680/680 Installed: adobe-mappings-cmap-20171205-9.fc33.noarch adobe-mappings-cmap-deprecated-20171205-9.fc33.noarch adobe-mappings-pdf-20180407-7.fc33.noarch annobin-9.58-1.fc34.x86_64 atk-2.36.0-2.fc33.x86_64 avahi-libs-0.8-6.fc34.x86_64 biber-2.14-4.fc33.noarch cairo-1.17.4-1.fc34.x86_64 cairo-gobject-1.17.4-1.fc34.x86_64 clang-libs-11.1.0-0.3.rc2.fc34.x86_64 clang-resource-filesystem-11.1.0-0.3.rc2.fc34.x86_64 cmake-3.19.3-1.fc34.x86_64 cmake-data-3.19.3-1.fc34.noarch cmake-filesystem-3.19.3-1.fc34.x86_64 cmake-rpm-macros-3.19.3-1.fc34.noarch cpp-11.0.0-0.17.fc34.x86_64 crypto-policies-scripts-20210127-2.gitb21c811.fc34.noarch cups-libs-1:2.3.3op1-1.fc34.x86_64 dbus-libs-1:1.12.20-2.fc33.x86_64 dejavu-sans-fonts-2.37-15.fc34.noarch doxygen-1:1.9.1-4.fc34.x86_64 emacs-filesystem-1:27.1-2.fc34.noarch flexiblas-3.0.4-2.fc34.x86_64 flexiblas-netlib-3.0.4-2.fc34.x86_64 flexiblas-openblas-openmp-3.0.4-2.fc34.x86_64 fontconfig-2.13.93-4.fc34.x86_64 fonts-filesystem-1:2.0.5-4.fc33.noarch freetype-2.10.4-1.fc34.x86_64 fribidi-1.0.10-3.fc33.x86_64 gcc-11.0.0-0.17.fc34.x86_64 gcc-c++-11.0.0-0.17.fc34.x86_64 gd-2.3.0-3.fc33.x86_64 gdbm-libs-1:1.19-1.fc34.x86_64 gdk-pixbuf2-2.40.0-3.fc33.x86_64 gdk-pixbuf2-modules-2.40.0-3.fc33.x86_64 ghostscript-9.53.3-4.fc34.x86_64 glib2-2.67.1-3.fc34.x86_64 glibc-devel-2.32.9000-26.fc34.x86_64 glibc-headers-x86-2.32.9000-26.fc34.noarch gnutls-3.6.15-2.fc34.x86_64 google-droid-sans-fonts-20200215-8.fc34.noarch graphite2-1.3.14-6.fc34.x86_64 graphviz-2.44.0-16.fc34.x86_64 groff-base-1.22.4-4.fc34.x86_64 gtk-update-icon-cache-3.24.24-2.fc34.x86_64 gtk2-2.24.33-3.fc34.x86_64 gts-0.7.6-38.20121130.fc33.x86_64 harfbuzz-2.7.4-1.fc34.x86_64 hicolor-icon-theme-0.17-9.fc33.noarch isl-0.16.1-12.fc33.x86_64 jasper-libs-2.0.24-1.fc34.x86_64 jbig2dec-libs-0.19-3.fc34.x86_64 jbigkit-libs-2.1-20.fc34.x86_64 jsoncpp-1.9.4-2.fc34.x86_64 kernel-headers-5.11.0-0.rc5.git0.1.fc34.x86_64 langpacks-core-font-en-3.0-6.fc34.noarch lasi-1.1.3-4.fc33.x86_64 lcms2-2.11-2.fc33.x86_64 libICE-1.0.10-5.fc34.x86_64 libSM-1.2.3-7.fc34.x86_64 libX11-1.7.0-2.fc34.x86_64 libX11-common-1.7.0-2.fc34.noarch libXau-1.0.9-5.fc34.x86_64 libXaw-1.0.13-16.fc34.x86_64 libXcomposite-0.4.5-4.fc34.x86_64 libXcursor-1.2.0-4.fc34.x86_64 libXdamage-1.1.5-4.fc34.x86_64 libXext-1.3.4-5.fc34.x86_64 libXfixes-5.0.3-13.fc34.x86_64 libXft-2.3.3-5.fc34.x86_64 libXi-1.7.10-5.fc34.x86_64 libXinerama-1.1.4-7.fc34.x86_64 libXmu-1.1.3-5.fc34.x86_64 libXpm-3.5.13-4.fc34.x86_64 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texlive-euro-ce-9:svn25714-36.fc34.noarch texlive-eurosym-9:svn17265.1.4_subrfix-36.fc34.noarch texlive-extsizes-9:svn17263.1.4a-36.fc34.noarch texlive-fancybox-9:svn18304.1.4-36.fc34.noarch texlive-fancyhdr-9:svn49886-36.fc34.noarch texlive-fancyref-9:svn15878.0.9c-36.fc34.noarch texlive-fancyvrb-9:svn53392-36.fc34.noarch texlive-filecontents-9:svn52142-36.fc34.noarch texlive-filehook-9:svn53655-36.fc34.noarch texlive-finstrut-9:svn21719.0.5-36.fc34.noarch texlive-fix2col-9:svn38770-36.fc34.noarch texlive-float-9:svn15878.1.3d-36.fc34.noarch texlive-fontspec-9:svn53860-36.fc34.noarch texlive-footmisc-9:svn23330.5.5b-36.fc34.noarch texlive-footnotehyper-9:svn52676-36.fc34.noarch texlive-fp-9:svn49719-36.fc34.noarch texlive-fpl-9:svn54512-36.fc34.noarch texlive-geometry-9:svn54080-36.fc34.noarch texlive-gettitlestring-9:svn53170-36.fc34.noarch texlive-glyphlist-9:20200327-25.fc34.noarch texlive-graphics-9:svn53640-36.fc34.noarch texlive-graphics-cfg-9:svn41448-36.fc34.noarch texlive-graphics-def-9:svn54522-36.fc34.noarch texlive-grfext-9:svn53024-36.fc34.noarch texlive-grffile-9:svn52756-36.fc34.noarch texlive-helvetic-9:svn31835.0-36.fc34.noarch texlive-hobsub-9:svn52810-36.fc34.noarch texlive-hologo-9:svn53048-36.fc34.noarch texlive-hycolor-9:svn53584-36.fc34.noarch texlive-hyperref-9:svn54841-36.fc34.noarch texlive-hyph-utf8-9:svn54568-36.fc34.noarch texlive-hyphen-base-9:svn54763-36.fc34.noarch texlive-hyphenex-9:svn37354.0-36.fc34.noarch texlive-ifmtarg-9:svn47544-36.fc34.noarch texlive-ifplatform-9:svn45533-36.fc34.noarch texlive-iftex-9:svn54159-36.fc34.noarch texlive-index-9:svn24099.4.1beta-36.fc34.noarch texlive-infwarerr-9:svn53023-36.fc34.noarch texlive-intcalc-9:svn53168-36.fc34.noarch texlive-jknapltx-9:svn19440.0-36.fc34.noarch texlive-kastrup-9:svn15878.0-36.fc34.noarch texlive-knuth-lib-9:svn35820.0-36.fc34.noarch texlive-knuth-local-9:svn38627-36.fc34.noarch texlive-koma-script-9:svn54825-36.fc34.noarch texlive-kpathsea-9:20200327-25.fc34.x86_64 texlive-kvdefinekeys-9:svn53193-36.fc34.noarch texlive-kvoptions-9:svn52985-36.fc34.noarch texlive-kvsetkeys-9:svn53166-36.fc34.noarch texlive-l3backend-9:svn54259-36.fc34.noarch texlive-l3experimental-9:svn53394-36.fc34.noarch texlive-l3kernel-9:svn54672-36.fc34.noarch texlive-l3packages-9:svn54131-36.fc34.noarch texlive-latex-9:20200327-25.fc34.noarch texlive-latex-fonts-9:svn28888.0-36.fc34.noarch texlive-latexbug-9:svn52414-36.fc34.noarch texlive-latexconfig-9:svn53525-36.fc34.noarch texlive-letltxmacro-9:svn53022-36.fc34.noarch texlive-lib-9:20200327-25.fc34.x86_64 texlive-lineno-9:svn21442.4.41-36.fc34.noarch texlive-listings-9:svn54554-36.fc34.noarch texlive-lm-9:svn48145-36.fc34.noarch texlive-lm-math-9:svn36915.1.959-36.fc34.noarch texlive-logreq-9:svn53003-36.fc34.noarch texlive-ltabptch-9:svn17533.1.74d-36.fc34.noarch texlive-ltxcmds-9:svn53165-36.fc34.noarch texlive-ltxmisc-9:svn21927.0-36.fc34.noarch texlive-lua-alt-getopt-9:svn29349.0.7.0-36.fc34.noarch texlive-luabidi-9:svn54512-36.fc34.noarch texlive-luahbtex-9:20200327-25.fc34.x86_64 texlive-lualatex-math-9:svn52663-36.fc34.noarch texlive-lualibs-9:svn53682-36.fc34.noarch texlive-luaotfload-9:20200327-25.fc34.noarch texlive-luatex-9:20200327-25.fc34.x86_64 texlive-luatexbase-9:svn52663-36.fc34.noarch texlive-lwarp-9:20200327-25.fc34.noarch texlive-makecmds-9:svn15878.0-36.fc34.noarch texlive-makeindex-9:20200327-25.fc34.x86_64 texlive-manfnt-font-9:svn54684-36.fc34.noarch texlive-marginnote-9:svn48383-36.fc34.noarch texlive-marvosym-9:svn29349.2.2a-36.fc34.noarch texlive-mathpazo-9:svn52663-36.fc34.noarch texlive-mathspec-9:svn42773-36.fc34.noarch texlive-mathtools-9:svn54516-36.fc34.noarch texlive-mdwtools-9:svn15878.1.05.4-36.fc34.noarch texlive-memoir-9:svn54554-36.fc34.noarch texlive-metafont-9:20200327-25.fc34.x86_64 texlive-metalogo-9:svn18611.0.12-36.fc34.noarch texlive-mflogo-9:svn42428-36.fc34.noarch texlive-mflogo-font-9:svn54512-36.fc34.noarch texlive-mfnfss-9:svn46036-36.fc34.noarch texlive-mfware-9:20200327-25.fc34.x86_64 texlive-microtype-9:svn52853-36.fc34.noarch texlive-minitoc-9:svn48196-36.fc34.noarch texlive-mnsymbol-9:svn18651.1.4-36.fc34.noarch texlive-modes-9:svn53604-36.fc34.noarch texlive-mparhack-9:svn15878.1.4-36.fc34.noarch texlive-mptopdf-9:20200327-25.fc34.noarch texlive-ms-9:svn51784-36.fc34.noarch texlive-multido-9:svn18302.1.42-36.fc34.noarch texlive-natbib-9:svn20668.8.31b-36.fc34.noarch texlive-ncntrsbk-9:svn31835.0-36.fc34.noarch texlive-newfloat-9:svn52906-36.fc34.noarch texlive-notoccite-9:svn18129.0-36.fc34.noarch texlive-ntgclass-9:svn53882-36.fc34.noarch texlive-oberdiek-9:20200327-25.fc34.noarch texlive-palatino-9:svn31835.0-36.fc34.noarch texlive-paralist-9:svn43021-36.fc34.noarch texlive-parallel-9:svn15878.0-36.fc34.noarch texlive-parskip-9:svn53503-36.fc34.noarch texlive-pdfcolmk-9:svn52912-36.fc34.noarch texlive-pdfescape-9:svn53082-36.fc34.noarch texlive-pdflscape-9:svn53047-36.fc34.noarch texlive-pdfpages-9:svn53583-36.fc34.noarch texlive-pdftex-9:20200327-25.fc34.x86_64 texlive-pdftexcmds-9:svn52913-36.fc34.noarch texlive-pgf-9:svn54512-36.fc34.noarch texlive-picture-9:svn54867-36.fc34.noarch texlive-placeins-9:svn19848.2.2-36.fc34.noarch texlive-plain-9:svn43076-36.fc34.noarch texlive-polyglossia-9:svn54758-36.fc34.noarch texlive-psfrag-9:svn15878.3.04-36.fc34.noarch texlive-pslatex-9:svn16416.0-36.fc34.noarch texlive-psnfss-9:svn54694-36.fc34.noarch texlive-pspicture-9:svn15878.0-36.fc34.noarch texlive-pst-3d-9:svn17257.1.10-36.fc34.noarch texlive-pst-coil-9:svn37377.1.07-36.fc34.noarch texlive-pst-eps-9:svn15878.1.0-36.fc34.noarch texlive-pst-fill-9:svn15878.1.01-36.fc34.noarch texlive-pst-grad-9:svn15878.1.06-36.fc34.noarch texlive-pst-math-9:svn49425-36.fc34.noarch texlive-pst-node-9:svn54687-36.fc34.noarch texlive-pst-ovl-9:svn45506-36.fc34.noarch texlive-pst-plot-9:svn54080-36.fc34.noarch texlive-pst-text-9:svn49542-36.fc34.noarch texlive-pst-tools-9:svn54518-36.fc34.noarch texlive-pst-tree-9:svn43272-36.fc34.noarch texlive-pstricks-9:svn54080-36.fc34.noarch texlive-pstricks-add-9:svn53763-36.fc34.noarch texlive-pxfonts-9:svn15878.0-36.fc34.noarch texlive-qstest-9:svn15878.0-36.fc34.noarch texlive-ragged2e-9:svn51780-36.fc34.noarch texlive-rcs-9:svn15878.0-36.fc34.noarch texlive-realscripts-9:svn39706-36.fc34.noarch texlive-refcount-9:svn53164-36.fc34.noarch texlive-rerunfilecheck-9:svn54841-36.fc34.noarch texlive-rsfs-9:svn15878.0-36.fc34.noarch texlive-sansmath-9:svn17997.1.1-36.fc34.noarch texlive-sansmathaccent-9:svn53628-36.fc34.noarch texlive-sauerj-9:svn15878.0-36.fc34.noarch texlive-section-9:svn20180.0-36.fc34.noarch texlive-seminar-9:svn34011.1.62-36.fc34.noarch texlive-sepnum-9:svn20186.2.0-36.fc34.noarch texlive-setspace-9:svn24881.6.7a-36.fc34.noarch texlive-showexpl-9:svn42677-36.fc34.noarch texlive-soul-9:svn15878.2.4-36.fc34.noarch texlive-stringenc-9:svn52982-36.fc34.noarch texlive-subfig-9:svn15878.1.3-36.fc34.noarch texlive-symbol-9:svn31835.0-36.fc34.noarch texlive-tex-9:20200327-25.fc34.x86_64 texlive-tex-gyre-9:svn48058-36.fc34.noarch texlive-tex-gyre-math-9:svn41264-36.fc34.noarch texlive-tex-ini-files-9:svn40533-36.fc34.noarch texlive-texlive-common-doc-9:svn54176-36.fc34.noarch texlive-texlive-docindex-9:svn54903-36.fc34.noarch texlive-texlive-en-9:20200327-25.fc34.noarch texlive-texlive-msg-translations-9:svn54919-36.fc34.noarch texlive-texlive-scripts-9:20200327-25.fc34.noarch texlive-texlive.infra-9:20200327-25.fc34.noarch texlive-textcase-9:svn52092-36.fc34.noarch texlive-thumbpdf-9:20200327-25.fc34.noarch texlive-times-9:svn35058.0-36.fc34.noarch texlive-tipa-9:svn29349.1.3-36.fc34.noarch texlive-titlesec-9:svn52413-36.fc34.noarch texlive-tools-9:svn53640-36.fc34.noarch texlive-translator-9:svn54512-36.fc34.noarch texlive-transparent-9:svn52981-36.fc34.noarch texlive-txfonts-9:svn15878.0-36.fc34.noarch texlive-typehtml-9:svn17134.0-36.fc34.noarch texlive-ucharcat-9:svn38907-36.fc34.noarch texlive-ucs-9:svn35853.2.2-36.fc34.noarch texlive-underscore-9:svn18261.0-36.fc34.noarch texlive-unicode-data-9:svn54758-36.fc34.noarch texlive-unicode-math-9:svn53609-36.fc34.noarch texlive-uniquecounter-9:svn53162-36.fc34.noarch texlive-updmap-map-9:svn56618-36.fc34.noarch texlive-url-9:svn32528.3.4-36.fc34.noarch texlive-utopia-9:svn15878.0-36.fc34.noarch texlive-varwidth-9:svn24104.0.92-36.fc34.noarch texlive-wasy-9:svn53533-36.fc34.noarch texlive-wasy-type1-9:svn53534-36.fc34.noarch texlive-wasysym-9:svn54080-36.fc34.noarch texlive-xcolor-9:svn41044-36.fc34.noarch texlive-xdvi-9:20200327-25.fc34.x86_64 texlive-xetex-9:20200327-25.fc34.x86_64 texlive-xetexconfig-9:svn45845-36.fc34.noarch texlive-xifthen-9:svn38929-36.fc34.noarch texlive-xkeyval-9:svn35741.2.7a-36.fc34.noarch texlive-xltxtra-9:svn49555-36.fc34.noarch texlive-xpatch-9:svn54563-36.fc34.noarch texlive-xstring-9:svn49946-36.fc34.noarch texlive-xunicode-9:svn30466.0.981-36.fc34.noarch texlive-zapfchan-9:svn31835.0-36.fc34.noarch texlive-zapfding-9:svn31835.0-36.fc34.noarch texlive-zref-9:svn54098-36.fc34.noarch urw-base35-bookman-fonts-20200910-2.fc34.noarch urw-base35-c059-fonts-20200910-2.fc34.noarch urw-base35-d050000l-fonts-20200910-2.fc34.noarch urw-base35-fonts-20200910-2.fc34.noarch urw-base35-fonts-common-20200910-2.fc34.noarch urw-base35-gothic-fonts-20200910-2.fc34.noarch urw-base35-nimbus-mono-ps-fonts-20200910-2.fc34.noarch urw-base35-nimbus-roman-fonts-20200910-2.fc34.noarch urw-base35-nimbus-sans-fonts-20200910-2.fc34.noarch urw-base35-p052-fonts-20200910-2.fc34.noarch urw-base35-standard-symbols-ps-fonts-20200910-2.fc34.noarch urw-base35-z003-fonts-20200910-2.fc34.noarch vim-filesystem-2:8.2.2311-1.fc34.noarch xapian-core-libs-1.4.17-2.fc34.x86_64 xml-common-0.6.3-55.fc33.noarch xorg-x11-font-utils-1:7.5-47.fc34.x86_64 xorg-x11-fonts-ISO8859-1-100dpi-7.5-26.fc34.noarch zlib-devel-1.2.11-23.fc34.x86_64 zziplib-0.13.71-1.fc34.x86_64 Complete! Finish: build setup for apbs-3.0.0-6.fc34.src.rpm Start: rpmbuild apbs-3.0.0-6.fc34.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1609459200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.53mj9n + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf apbs-pdb2pqr-vAPBS-3.0.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/apbs-pdb2pqr-vAPBS-3.0.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd apbs-pdb2pqr-vAPBS-3.0.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (apbs-cmake.patch):' Patch #0 (apbs-cmake.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 -b --suffix .apbs-cmake --fuzz=0 patching file apbs/CMakeLists.txt patching file apbs/src/CMakeLists.txt patching file apbs/tools/manip/CMakeLists.txt patching file apbs/tools/mesh/CMakeLists.txt + cp -p apbs/contrib/iapbs/COPYING apbs/contrib/iapbs/iapbs-COPYING + cp -p /builddir/build/SOURCES/apbs-LGPL_V2 apbs/contrib/iapbs/iapbs-LGPLv2 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.YGjNis + umask 022 + cd /builddir/build/BUILD + cd apbs-pdb2pqr-vAPBS-3.0.0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm' + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B x86_64-redhat-linux-gnu -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -S apbs -DBUILD_DOC:BOOL=OFF -DCMAKE_BUILD_TYPE:STRING=Release -DENABLE_iAPBS:BOOL=ON -DENABLE_OPENMP:BOOL=ON -DENABLE_VERBOSE_DEBUG:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -DENABLE_FETK:BOOL=OFF -DENABLE_PYTHON:BOOL=ON CMake Deprecation Warning at CMakeLists.txt:11 (cmake_policy): The OLD behavior for policy CMP0054 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- The C compiler identification is GNU 11.0.0 -- The CXX compiler identification is GNU 11.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Setting project paths -- Setting lookup paths for headers and libraries -- Computing machine epsilon values -- Floating point epsilon is 2.220446e-16 -- Double precision epsilon is 2.220446e-16 -- Looking for time -- Looking for time - found -- Looking for rand -- Looking for rand - found -- Looking for srand -- Looking for srand - found -- Inline functions enabled -- Checking for OpenMP -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- OpenMP support enabled CMake Deprecation Warning at src/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Adding apbs_generic -- With source files nosh.c;mgparm.c;femparm.c;pbamparm.c;pbsamparm.c;pbeparm.c;bemparm.c;geoflowparm.c;apolparm.c;vacc.c;valist.c;vatom.c;vpbe.c;vcap.c;vclist.c;vstring.c;vparam.c;vgreen.c -- With external header files nosh.h;mgparm.h;femparm.h;pbamparm.h;pbsamparm.h;pbeparm.h;bemparm.h;geoflowparm.h;apolparm.h;vacc.h;valist.h;vatom.h;vpbe.h;vcap.h;vclist.h;vstring.h;vparam.h;vgreen.h;vmatrix.h;vhal.h;vunit.h -- With internal header files -- With library dependencies m;stdc++;maloc;-fopenmp -- Added apbs_generic -- Adding apbs_pmgc -- With source files buildAd.c;buildBd.c;buildGd.c;buildPd.c;cgd.c;gsd.c;matvecd.c;mgcsd.c;mgdrvd.c;mgsubd.c;mikpckd.c;mlinpckd.c;mypdec.c;newtond.c;newdrvd.c;powerd.c;smoothd.c;mgfasd.c -- With external header files buildAd.h;buildBd.h;buildGd.h;buildPd.h;cgd.h;gsd.h;matvecd.h;mgcsd.h;mgdrvd.h;mgsubd.h;mikpckd.h;mlinpckd.h;mypdec.h;newtond.h;newdrvd.h;powerd.h;smoothd.h;mgfasd.h -- With internal header files -- With library dependencies m;stdc++;maloc;-fopenmp -- Added apbs_pmgc -- Adding apbs_mg -- With source files vgrid.c;vmgrid.c;vopot.c;vpmg.c;vpmgp.c -- With external header files vgrid.h;vmgrid.h;vopot.h;vpmg.h;vpmgp.h -- With internal header files -- With library dependencies m;stdc++;maloc;-fopenmp;apbs_generic;apbs_pmgc -- Added apbs_mg -- Adding apbs_routines -- With source files routines.c -- With external header files -- With internal header files -- With library dependencies m;stdc++;maloc;-fopenmp -- Added apbs_routines -- External Headers: -- -- APBS Libraries: m;stdc++;maloc;-fopenmp -- Internal Libraries: apbs_generic;apbs_pmgc;apbs_mg;apbs_routines -- -- -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -- Supplemental tools enabled -- Building mesh -- libraries: apbs -- Building manip -- libraries: apbs -- Found SWIG: /usr/bin/swig (found version "4.0.2") -- Found Python3: /usr/bin/python3.9 (found version "3.9.1") found components: Interpreter Development Development.Module Development.Embed -- ******* Python3 FOUND -- ***** Python3 include path is: /usr/include/python3.9 -- ***** Python3 library path is: /usr/lib64/libpython3.9.so -- ***** Python3 library dir is: /usr/lib64 -- Building of iAPBS interface enabled -- Found Python3: /usr/bin/python3.9 (found version "3.9.1") found components: Interpreter -- ******* Python3 FOUND /usr/bin/python3.9 -- TEST born_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t born -- TEST actin-dimer-auto_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t actin-dimer-auto -- TEST actin-dimer-parallel_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t actin-dimer-parallel -- TEST alkanes_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t alkanes -- TEST FKBP_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t FKBP -- TEST hca-bind_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t hca-bind -- TEST ionize_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t ionize -- TEST ion-pmf_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t ion-pmf -- TEST ion-protein_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t ion-protein -- TEST pka-lig_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t pka-lig -- TEST point-pmf_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t point-pmf -- TEST solv_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t solv -- TEST geoflow_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t geoflow -- TEST bem_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t bem -- TEST bem-pKa_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t bem-pKa -- TEST bem-binding-energy_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t bem-binding-energy -- TEST pbam_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t pbam -- TEST pbsam_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t pbsam -- TEST protein-rna_test COMMAND /usr/bin/python3.9 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/apbs_tester.py -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tests/test_cases.cfg -e /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/apbs -t protein-rna -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP CMAKE_SKIP_INSTALL_RPATH LIB_SUFFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu + /usr/bin/cmake --build x86_64-redhat-linux-gnu -j2 --verbose /usr/bin/cmake -S/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs -B/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/CMakeFiles /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/mg/CMakeFiles/apbs_mg.dir/build.make src/mg/CMakeFiles/apbs_mg.dir/depend /usr/bin/gmake -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg/CMakeFiles/apbs_mg.dir/DependInfo.cmake --color= gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg/CMakeFiles/apbs_mg.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg/CMakeFiles/apbs_mg.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg/CMakeFiles/apbs_mg.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/depend.internal". Scanning dependencies of target apbs_mg gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/mg/CMakeFiles/apbs_mg.dir/build.make src/mg/CMakeFiles/apbs_mg.dir/build Scanning dependencies of target apbs_generic gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 1%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vgrid.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vgrid.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c [ 2%] Building C object src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/nosh.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c: In function 'Vgrid_readDXBIN': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c:816:13: warning: variable 'isBinary' set but not used [-Wunused-but-set-variable] 816 | int isBinary = 0; | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c:813:25: warning: unused variable 'itmp' [-Wunused-variable] 813 | size_t i, j, k, itmp, u; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c: In function 'Vgrid_writeUHBD': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c:1697:36: warning: variable 'hy' set but not used [-Wunused-but-set-variable] 1697 | double xmin, ymin, zmin, hzed, hy, hx; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c:1697:30: warning: variable 'hzed' set but not used [-Wunused-but-set-variable] 1697 | double xmin, ymin, zmin, hzed, hy, hx; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c: In function 'Vgrid_readDXBIN': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vgrid.c:853:17: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 853 | fgets(tok, VMAX_BUFSIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c: In function 'NOsh_setupCalcGEOFLOWMANUAL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:2683:15: warning: variable 'apolparm' set but not used [-Wunused-but-set-variable] 2683 | APOLparm *apolparm = VNULL; | ^~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:57: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:57: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:57: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/maloc/maloc_base.h:82, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:57: In function 'strncpy', inlined from 'NOsh_parsePBAM' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:3139:3: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1000 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parsePBSAM' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:3268:3: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1000 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ [ 3%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vmgrid.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vmgrid.c In function 'strncpy', inlined from 'NOsh_parseAPOLAR' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:1348:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:582:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseELEC' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:1222:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:577:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_MESH' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:953:9, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:1007:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_CHARGE' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:918:5, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:1005:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_POTENTIAL' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:872:5, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:1003:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_KAPPA' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:827:5, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:1001:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_DIEL' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:772:5, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:999:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_DIEL' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:776:5, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:999:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_DIEL' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:780:5, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:999:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_PARM' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:723:13, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:997:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_PARM' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:701:13, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:997:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_MOL' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:659:9, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:995:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_MOL' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:640:9, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:995:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'NOsh_parseREAD_MOL' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:621:9, inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:995:13, inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.c:567:18: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vmgrid.c: In function 'Vmgrid_addGrid': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vmgrid.c:198:12: warning: unused variable 'tgrad' [-Wunused-variable] 198 | double tgrad[3]; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vmgrid.c:197:15: warning: unused variable 'rc' [-Wunused-variable] 197 | int i, j, rc; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vmgrid.c:197:12: warning: unused variable 'j' [-Wunused-variable] 197 | int i, j, rc; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vmgrid.c:197:9: warning: unused variable 'i' [-Wunused-variable] 197 | int i, j, rc; | ^ [ 4%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vopot.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vopot.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vopot.c: In function 'Vopot_curvature': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vopot.c:219:26: warning: variable 'eps_w' set but not used [-Wunused-but-set-variable] 219 | double u, T, charge, eps_w, xkappa, dist, size, val, *position, zkappa2; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vopot.c:219:18: warning: variable 'charge' set but not used [-Wunused-but-set-variable] 219 | double u, T, charge, eps_w, xkappa, dist, size, val, *position, zkappa2; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vopot.c:219:15: warning: variable 'T' set but not used [-Wunused-but-set-variable] 219 | double u, T, charge, eps_w, xkappa, dist, size, val, *position, zkappa2; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vopot.c:269:23: warning: 'val' may be used uninitialized in this function [-Wmaybe-uninitialized] 269 | u = u + val; | ~~^~~~~~~~~ [ 5%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o [ 7%] Building C object src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/mgparm.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/mgparm.c cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vpmg.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'Vpmg_ctor2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:157:61: warning: variable 'zkappa2' set but not used [-Wunused-but-set-variable] 157 | double ionConc[MAXION], ionQ[MAXION], ionRadii[MAXION], zkappa2, zks2; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'Vpmg_qmEnergySMPBE': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1503:12: warning: variable 'zks2' set but not used [-Wunused-but-set-variable] 1503 | zks2; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'Vpmg_qfEnergyPoint': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1712:13: warning: variable 'pvec' set but not used [-Wunused-but-set-variable] 1712 | double *pvec; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1709:24: warning: variable 'zmax' set but not used [-Wunused-but-set-variable] 1709 | double xmax, ymax, zmax, xmin, ymin, zmin, hx, hy, hzed, ifloat, jfloat; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1709:18: warning: variable 'ymax' set but not used [-Wunused-but-set-variable] 1709 | double xmax, ymax, zmax, xmin, ymin, zmin, hx, hy, hzed, ifloat, jfloat; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1709:12: warning: variable 'xmax' set but not used [-Wunused-but-set-variable] 1709 | double xmax, ymax, zmax, xmin, ymin, zmin, hx, hy, hzed, ifloat, jfloat; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'Vpmg_qfAtomEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1794:36: warning: variable 'zmax' set but not used [-Wunused-but-set-variable] 1794 | double xmax, xmin, ymax, ymin, zmax, zmin, hx, hy, hzed, ifloat, jfloat; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1794:24: warning: variable 'ymax' set but not used [-Wunused-but-set-variable] 1794 | double xmax, xmin, ymax, ymin, zmax, zmin, hx, hy, hzed, ifloat, jfloat; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1794:12: warning: variable 'xmax' set but not used [-Wunused-but-set-variable] 1794 | double xmax, xmin, ymax, ymin, zmax, zmin, hx, hy, hzed, ifloat, jfloat; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'focusFillBound': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1953:12: warning: variable 'charge' set but not used [-Wunused-but-set-variable] 1953 | charge, | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1952:13: warning: variable 'apos' set but not used [-Wunused-but-set-variable] 1952 | *apos, | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1951:12: warning: variable 'size' set but not used [-Wunused-but-set-variable] 1951 | size, | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1950:12: warning: variable 'xkappa' set but not used [-Wunused-but-set-variable] 1950 | xkappa, | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcfl2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:2668:40: warning: variable 'qzy' set but not used [-Wunused-but-set-variable] 2668 | double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:2668:36: warning: variable 'qzx' set but not used [-Wunused-but-set-variable] 2668 | double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:2668:24: warning: variable 'qyx' set but not used [-Wunused-but-set-variable] 2668 | double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcCalcOrig': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:2832:34: warning: unused variable 'debye' [-Wunused-variable] 2832 | double *dipole, *quadrupole, debye, eps_p; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:2832:22: warning: variable 'quadrupole' set but not used [-Wunused-but-set-variable] 2832 | double *dipole, *quadrupole, debye, eps_p; | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:2832:13: warning: variable 'dipole' set but not used [-Wunused-but-set-variable] 2832 | double *dipole, *quadrupole, debye, eps_p; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcflnew': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3415:31: warning: variable 'eps_p' set but not used [-Wunused-but-set-variable] 3415 | double dist, pre1, eps_w, eps_p, T, xkappa; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3410:29: warning: unused variable 'z1' [-Wunused-variable] 3410 | int x0, x1, y0, y1, z0, z1; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3410:25: warning: unused variable 'z0' [-Wunused-variable] 3410 | int x0, x1, y0, y1, z0, z1; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3410:21: warning: unused variable 'y1' [-Wunused-variable] 3410 | int x0, x1, y0, y1, z0, z1; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3410:17: warning: unused variable 'y0' [-Wunused-variable] 3410 | int x0, x1, y0, y1, z0, z1; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3410:13: warning: unused variable 'x1' [-Wunused-variable] 3410 | int x0, x1, y0, y1, z0, z1; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3410:9: warning: unused variable 'x0' [-Wunused-variable] 3410 | int x0, x1, y0, y1, z0, z1; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3409:13: warning: unused variable 'k' [-Wunused-variable] 3409 | int i,j,k, iatom, igrid; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3409:11: warning: unused variable 'j' [-Wunused-variable] 3409 | int i,j,k, iatom, igrid; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3409:9: warning: unused variable 'i' [-Wunused-variable] 3409 | int i,j,k, iatom, igrid; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'multipolebc': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3492:19: warning: variable 'kr3' set but not used [-Wunused-but-set-variable] 3492 | double kr,kr2,kr3; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcfl_sdh': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3608:40: warning: variable 'qzy' set but not used [-Wunused-but-set-variable] 3608 | double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3608:36: warning: variable 'qzx' set but not used [-Wunused-but-set-variable] 3608 | double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3608:24: warning: variable 'qyx' set but not used [-Wunused-but-set-variable] 3608 | double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3604:22: warning: unused variable 'quadrupole' [-Wunused-variable] 3604 | double *dipole, *quadrupole; | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3604:13: warning: unused variable 'dipole' [-Wunused-variable] 3604 | double *dipole, *quadrupole; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcfl_mdh': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3875:41: warning: variable 'eps_p' set but not used [-Wunused-but-set-variable] 3875 | double size, charge, xkappa, eps_w, eps_p, T, pre1, dist; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3874:22: warning: unused variable 'quadrupole' [-Wunused-variable] 3874 | double *dipole, *quadrupole; | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3874:13: warning: unused variable 'dipole' [-Wunused-variable] 3874 | double *dipole, *quadrupole; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcfl_mem': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4008:24: warning: unused variable 'edge_L' [-Wunused-variable] 4008 | double A, B, C, D, edge_L, l; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4007:38: warning: unused variable 'z_shift' [-Wunused-variable] 4007 | double dist, val, z_low, z_high, z_shift; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4007:12: warning: unused variable 'dist' [-Wunused-variable] 4007 | double dist, val, z_low, z_high, z_shift; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcfl_map': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4177:38: warning: variable 'hzed' set but not used [-Wunused-but-set-variable] 4177 | double position[3], pot, hx, hy, hzed; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4177:34: warning: variable 'hy' set but not used [-Wunused-but-set-variable] 4177 | double position[3], pot, hx, hy, hzed; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4177:30: warning: variable 'hx' set but not used [-Wunused-but-set-variable] 4177 | double position[3], pot, hx, hy, hzed; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4176:11: warning: unused variable 'pbe' [-Wunused-variable] 4176 | Vpbe *pbe; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoCoefMap': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4492:46: warning: unused variable 'pot' [-Wunused-variable] 4492 | double ionstr, position[3], tkappa, eps, pot, hx, hy, hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoCoefMolIon': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4638:16: warning: variable 'surfMeth' set but not used [-Wunused-but-set-variable] 4638 | Vsurf_Meth surfMeth; | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4630:11: warning: variable 'acc' set but not used [-Wunused-but-set-variable] 4630 | Vacc *acc; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoCoefMolDielNoSmooth': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:4746:30: warning: unused variable 'deps' [-Wunused-variable] 4746 | double srad, epsw, epsp, deps, area; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoCoefSpline': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5031:47: warning: variable 'rtot2' set but not used [-Wunused-but-set-variable] 5031 | double dx2, dy2, dz2, stot2, itot2, rtot, rtot2, splineWin, w3i; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoCharge': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5289:15: warning: unused variable 'rc' [-Wunused-variable] 5289 | Vrc_Codes rc; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoChargeMap': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5346:49: warning: variable 'hzed' set but not used [-Wunused-but-set-variable] 5346 | double position[3], charge, zmagic, hx, hy, hzed; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5346:45: warning: variable 'hy' set but not used [-Wunused-but-set-variable] 5346 | double position[3], charge, zmagic, hx, hy, hzed; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5346:41: warning: variable 'hx' set but not used [-Wunused-but-set-variable] 5346 | double position[3], charge, zmagic, hx, hy, hzed; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'Vpmg_force': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5829:12: warning: unused variable 'npF' [-Wunused-variable] 5829 | double npF[3]; /* Non-polar boundary force */ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'Vpmg_ibForce': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5854:24: warning: variable 'zlen' set but not used [-Wunused-but-set-variable] 5854 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5854:18: warning: variable 'ylen' set but not used [-Wunused-but-set-variable] 5854 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5854:12: warning: variable 'xlen' set but not used [-Wunused-but-set-variable] 5854 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:5848:13: warning: variable 'alist' set but not used [-Wunused-but-set-variable] 5848 | Valist *alist; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'Vpmg_dbForce': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6019:55: warning: variable 'kT' set but not used [-Wunused-but-set-variable] 6019 | double rtot, dx, gpos[3], tgrad[3], dbFmag, epsw, kT; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6019:18: warning: variable 'dx' set but not used [-Wunused-but-set-variable] 6019 | double rtot, dx, gpos[3], tgrad[3], dbFmag, epsw, kT; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6018:66: warning: variable 'rtot2' set but not used [-Wunused-but-set-variable] 6018 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2, epsp; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6018:24: warning: variable 'zlen' set but not used [-Wunused-but-set-variable] 6018 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2, epsp; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6018:18: warning: variable 'ylen' set but not used [-Wunused-but-set-variable] 6018 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2, epsp; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6018:12: warning: variable 'xlen' set but not used [-Wunused-but-set-variable] 6018 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2, epsp; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'qfForceSpline2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6453:24: warning: variable 'zlen' set but not used [-Wunused-but-set-variable] 6453 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6453:18: warning: variable 'ylen' set but not used [-Wunused-but-set-variable] 6453 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6453:12: warning: variable 'xlen' set but not used [-Wunused-but-set-variable] 6453 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'qfForceSpline4': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6576:15: warning: unused variable 'k' [-Wunused-variable] 6576 | int i, j, k, ii, jj, kk; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6576:12: warning: unused variable 'j' [-Wunused-variable] 6576 | int i, j, k, ii, jj, kk; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6568:24: warning: variable 'zlen' set but not used [-Wunused-but-set-variable] 6568 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6568:18: warning: variable 'ylen' set but not used [-Wunused-but-set-variable] 6568 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6568:12: warning: variable 'xlen' set but not used [-Wunused-but-set-variable] 6568 | double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'markFrac': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6692:39: warning: variable 'a000' set but not used [-Wunused-but-set-variable] 6692 | double dx, dx2, dy, dy2, dz, dz2, a000, a001, a010, a100, r2; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'zlapSolve': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6912:12: warning: unused variable 'norm' [-Wunused-variable] 6912 | double norm, coef, proj, eigx, eigy, eigz; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'Vpmg_solveLaplace': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7044:35: warning: variable 'n' set but not used [-Wunused-but-set-variable] 7044 | int i, j, k, ijk, nx, ny, nz, n, dilo, dihi, djlo, djhi, dklo, dkhi; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7044:18: warning: unused variable 'ijk' [-Wunused-variable] 7044 | int i, j, k, ijk, nx, ny, nz, n, dilo, dihi, djlo, djhi, dklo, dkhi; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoPermanentMultipole': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:58: warning: unused variable 'mqzz' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:53: warning: unused variable 'mqzy' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:48: warning: unused variable 'mqzx' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:43: warning: unused variable 'mqyy' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:38: warning: unused variable 'mqyx' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:33: warning: unused variable 'mqxx' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:29: warning: unused variable 'muz' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:25: warning: unused variable 'muy' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:21: warning: unused variable 'mux' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:18: warning: unused variable 'mc' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7263:12: warning: unused variable 'debye' [-Wunused-variable] 7263 | double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7262:24: warning: unused variable 'mr2' [-Wunused-variable] 7262 | double mir,mjr,mkr,mr2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7262:20: warning: unused variable 'mkr' [-Wunused-variable] 7262 | double mir,mjr,mkr,mr2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7262:16: warning: unused variable 'mjr' [-Wunused-variable] 7262 | double mir,mjr,mkr,mr2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7262:12: warning: unused variable 'mir' [-Wunused-variable] 7262 | double mir,mjr,mkr,mr2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7258:9: warning: unused variable 'i' [-Wunused-variable] 7258 | int i, ii, jj, kk, nx, ny, nz, iatom; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7253:47: warning: unused variable 'qave' [-Wunused-variable] 7253 | double c,ux,uy,uz,qxx,qyx,qyy,qzx,qzy,qzz,qave; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7252:29: warning: unused variable 'quad' [-Wunused-variable] 7252 | double charge, *dipole,*quad; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7252:21: warning: unused variable 'dipole' [-Wunused-variable] 7252 | double charge, *dipole,*quad; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoCoefSpline4': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:9948:47: warning: variable 'rtot2' set but not used [-Wunused-but-set-variable] 9948 | double dx2, dy2, dz2, stot2, itot2, rtot, rtot2, splineWin; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:9946:42: warning: unused variable 'w2i' [-Wunused-variable] 9946 | double irad, dx, dy, dz, epsw, epsp, w2i; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoPermanentInduced': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10278:9: warning: unused variable 'i' [-Wunused-variable] 10278 | int i, ii, jj, kk, nx, ny, nz, iatom; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10273:47: warning: unused variable 'qave' [-Wunused-variable] 10273 | double c,ux,uy,uz,qxx,qyx,qyy,qzx,qzy,qzz,qave; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10272:29: warning: unused variable 'quad' [-Wunused-variable] 10272 | double charge, *dipole,*quad; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10272:21: warning: unused variable 'dipole' [-Wunused-variable] 10272 | double charge, *dipole,*quad; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'fillcoCoefSpline3': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10441:27: warning: variable 'e5' set but not used [-Wunused-but-set-variable] 10441 | double e, e2, e3, e4, e5; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10439:47: warning: variable 'rtot2' set but not used [-Wunused-but-set-variable] 10439 | double dx2, dy2, dz2, stot2, itot2, rtot, rtot2, splineWin; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10437:42: warning: unused variable 'w2i' [-Wunused-variable] 10437 | double irad, dx, dy, dz, epsw, epsp, w2i; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcolcomp': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10746:55: warning: variable 'mxlv' set but not used [-Wunused-but-set-variable] 10746 | int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10746:47: warning: unused variable 'maxlev' [-Wunused-variable] 10746 | int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10746:39: warning: unused variable 'ierror' [-Wunused-variable] 10746 | int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10746:15: warning: variable 'niwk' set but not used [-Wunused-but-set-variable] 10746 | int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10746:9: warning: variable 'nrwk' set but not used [-Wunused-but-set-variable] 10746 | int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10743:29: warning: unused variable 'i' [-Wunused-variable] 10743 | int nrow, ncol, nnzero, i; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10743:21: warning: unused variable 'nnzero' [-Wunused-variable] 10743 | int nrow, ncol, nnzero, i; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10743:15: warning: unused variable 'ncol' [-Wunused-variable] 10743 | int nrow, ncol, nnzero, i; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10743:9: warning: unused variable 'nrow' [-Wunused-variable] 10743 | int nrow, ncol, nnzero, i; | ^~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:73: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcolcomp2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10804:5: note: in expansion of macro 'MAT2' 10804 | MAT2(iz, 50, nlev); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcolcomp3': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10836:5: note: in expansion of macro 'MAT2' 10836 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: In function 'bcolcomp4': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10874:5: note: in expansion of macro 'MAT3' 10874 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10873:5: note: in expansion of macro 'MAT3' 10873 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10872:5: note: in expansion of macro 'MAT3' 10872 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10871:5: note: in expansion of macro 'MAT3' 10871 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10870:5: note: in expansion of macro 'MAT3' 10870 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:10866:27: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 10866 | int inonz, iirow, nn, nrow, ncol, nonz, irow, n; | ^~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:73: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:7229:16: warning: 'd3bspline4' defined but not used [-Wunused-function] 7229 | VPUBLIC double d3bspline4(double x) { | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:6684:15: warning: 'markFrac' defined but not used [-Wunused-function] 6684 | VPRIVATE void markFrac( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:3868:15: warning: 'bcfl_mdh' defined but not used [-Wunused-function] 3868 | VPRIVATE void bcfl_mdh(Vpmg *thee){ | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:2828:15: warning: 'bcCalcOrig' defined but not used [-Wunused-function] 2828 | VPRIVATE void bcCalcOrig(Vpmg *thee) { | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:2547:17: warning: 'bcfl1sp' defined but not used [-Wunused-function] 2547 | VPRIVATE double bcfl1sp(double size, double *apos, double charge, | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.c:1148:17: warning: 'Vpmg_polarizEnergy' defined but not used [-Wunused-function] 1148 | VPRIVATE double Vpmg_polarizEnergy(Vpmg *thee, | ^~~~~~~~~~~~~~~~~~ [ 8%] Building C object src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/femparm.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/femparm.c [ 9%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/pbamparm.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c: In function 'PBAMparm_parseRandorient': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:305:17: warning: unused variable 'name' [-Wunused-variable] 305 | const char* name = "randorient"; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c: In function 'PBAMparm_parse3Dmap': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:373:10: warning: unused variable 'tok' [-Wunused-variable] 373 | char tok[VMAX_BUFSIZE]; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:372:17: warning: unused variable 'name' [-Wunused-variable] 372 | const char* name = "3dmap"; | ^~~~ In file included from /usr/include/string.h:519, from /usr/include/maloc/maloc_base.h:82, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:68, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:57: In function 'strncpy', inlined from 'PBAMparm_parseRunType' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:282:7: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseRunName' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:297:7: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseUnits' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:344:7: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseTermcombine' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:452:7: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseGrid2D' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:400:7: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseGrid2D' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:408:7: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseXYZ' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:656:8: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseDiff' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:500:8: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseTerm' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:563:9: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBAMparm_parseTerm' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.c:573:11: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ [ 10%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/pbsamparm.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c: In function 'PBSAMparm_ctor2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c:79:9: warning: unused variable 'i' [-Wunused-variable] 79 | int i; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c: In function 'PBSAMparm_parseMSMS': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c:183:13: warning: unused variable 'td' [-Wunused-variable] 183 | int td; | ^~ In file included from /usr/include/string.h:519, from /usr/include/maloc/maloc_base.h:82, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:68, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c:57: In function 'strncpy', inlined from 'PBSAMparm_parseSurf' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c:174:8: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBSAMparm_parseImat' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c:211:8: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBSAMparm_parseExp' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.c:226:8: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ [ 11%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/pbeparm.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbeparm.c In file included from /usr/include/string.h:519, from /usr/include/maloc/maloc_base.h:82, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbeparm.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbeparm.c:57: In function 'strncpy', inlined from 'PBEparm_parseWRITE' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbeparm.c:1163:9: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'PBEparm_parseWRITEMAT' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbeparm.c:1204:5: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building C object src/generic/CMakeFiles/apbs_generic.dir/bemparm.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/bemparm.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c: In function 'BEMparm_ctor2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c:79:9: warning: unused variable 'i' [-Wunused-variable] 79 | int i; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c: In function 'BEMparm_check': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c:127:36: warning: unused variable 'nlev' [-Wunused-variable] 127 | int i, tdime[3], ti, tnlev[3], nlev; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c:127:26: warning: unused variable 'tnlev' [-Wunused-variable] 127 | int i, tdime[3], ti, tnlev[3], nlev; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c:127:22: warning: unused variable 'ti' [-Wunused-variable] 127 | int i, tdime[3], ti, tnlev[3], nlev; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c:127:12: warning: unused variable 'tdime' [-Wunused-variable] 127 | int i, tdime[3], ti, tnlev[3], nlev; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c:127:9: warning: unused variable 'i' [-Wunused-variable] 127 | int i, tdime[3], ti, tnlev[3], nlev; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c: In function 'BEMparm_copy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/bemparm.c:176:9: warning: unused variable 'i' [-Wunused-variable] 176 | int i; | ^ [ 14%] Building C object src/generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/geoflowparm.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.c: In function 'GEOFLOWparm_ctor2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.c:79:9: warning: unused variable 'i' [-Wunused-variable] 79 | int i; | ^ [ 15%] Building C object src/generic/CMakeFiles/apbs_generic.dir/apolparm.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/apolparm.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/apolparm.c [ 16%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vacc.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c: In function 'VaccSurf_dtor': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:841:11: warning: variable 'mem' set but not used [-Wunused-but-set-variable] 841 | Vmem *mem; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c: In function 'Vacc_splineAccGradAtomNorm3': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1104:27: warning: variable 'e5' set but not used [-Wunused-but-set-variable] 1104 | double e, e2, e3, e4, e5; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c: In function 'Vacc_atomdSASA': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1338:12: warning: variable 'ts' set but not used [-Wunused-but-set-variable] 1338 | time_t ts; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1335:15: warning: variable 'ref' set but not used [-Wunused-but-set-variable] 1335 | VaccSurf *ref; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c: In function 'Vacc_totalAtomdSASA': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1395:15: warning: variable 'ref' set but not used [-Wunused-but-set-variable] 1395 | VaccSurf *ref; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1392:23: warning: variable 'tRad' set but not used [-Wunused-but-set-variable] 1392 | double *temp_Pos, tRad; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1391:9: warning: variable 'iatom' set but not used [-Wunused-but-set-variable] 1391 | int iatom; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c: In function 'Vacc_totalAtomdSAV': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1454:15: warning: variable 'ref' set but not used [-Wunused-but-set-variable] 1454 | VaccSurf *ref; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1451:23: warning: variable 'tRad' set but not used [-Wunused-but-set-variable] 1451 | double *temp_Pos, tRad; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1450:9: warning: variable 'iatom' set but not used [-Wunused-but-set-variable] 1450 | int iatom; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c: In function 'Vacc_wcaEnergyAtom': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1584:9: warning: variable 'npts' set but not used [-Wunused-but-set-variable] 1584 | int npts[3]; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c: In function 'Vacc_wcaForceAtom': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1807:12: warning: variable 'ts' set but not used [-Wunused-but-set-variable] 1807 | time_t ts; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vacc.c:1764:9: warning: variable 'npts' set but not used [-Wunused-but-set-variable] 1764 | npts[3], | ^~~~ [ 17%] Building C object src/generic/CMakeFiles/apbs_generic.dir/valist.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/valist.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c: In function 'Valist_readPQR': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c:618:10: warning: unused variable 'chs' [-Wunused-variable] 618 | char chs[VMAX_BUFSIZE]; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c: In function 'Valist_readXML': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c:834:17: warning: 'radius' may be used uninitialized in this function [-Wmaybe-uninitialized] 834 | Vatom_setRadius(nextAtom, radius); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c:833:17: warning: 'charge' may be used uninitialized in this function [-Wmaybe-uninitialized] 833 | Vatom_setCharge(nextAtom, charge); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c:831:48: warning: 'z' may be used uninitialized in this function [-Wmaybe-uninitialized] 831 | pos[0] = x; pos[1] = y; pos[2] = z; | ~~~~~~~^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c:831:36: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized] 831 | pos[0] = x; pos[1] = y; pos[2] = z; | ~~~~~~~^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/valist.c:831:24: warning: 'x' may be used uninitialized in this function [-Wmaybe-uninitialized] 831 | pos[0] = x; pos[1] = y; pos[2] = z; | ~~~~~~~^~~ [ 18%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vatom.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vatom.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vatom.c [ 20%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vpbe.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vpbe.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vpbe.c [ 21%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vcap.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vcap.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vcap.c [ 22%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vclist.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vclist.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vclist.c [ 23%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vstring.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vstring.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vstring.c [ 24%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vparam.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vparam.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.c [ 25%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/mg && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vpmgp.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmgp.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmgp.c: In function 'Vpmgp_size': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmgp.c:204:87: warning: unused variable 'iretot' [-Wunused-variable] 204 | int nxf, nyf, nzf, level, num_nf_oper, num_narrc_oper, n_band, nc_band, num_band, iretot; | ^~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 25%] Built target apbs_mg /usr/bin/gmake -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/depend.internal". Scanning dependencies of target apbs_pmgc gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 27%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildAd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c: In function 'VbuildA': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:66:5: note: in expansion of macro 'MAT2' 66 | MAT2(ac, *nx * *ny * *nz, 14); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c: In function 'VbuildA_fv': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gzcf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:167:5: note: in expansion of macro 'MAT3' 167 | MAT3(gzcf, *nx, *ny, 2); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gycf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:166:5: note: in expansion of macro 'MAT3' 166 | MAT3(gycf, *nx, *nz, 2); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gxcf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:165:5: note: in expansion of macro 'MAT3' 165 | MAT3(gxcf, *ny, *nz, 2); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:164:5: note: in expansion of macro 'MAT3' 164 | MAT3( oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:163:5: note: in expansion of macro 'MAT3' 163 | MAT3( oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:162:5: note: in expansion of macro 'MAT3' 162 | MAT3( uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a3cf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:161:5: note: in expansion of macro 'MAT3' 161 | MAT3(a3cf, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a2cf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:160:5: note: in expansion of macro 'MAT3' 160 | MAT3(a2cf, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a1cf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:159:5: note: in expansion of macro 'MAT3' 159 | MAT3(a1cf, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:158:5: note: in expansion of macro 'MAT3' 158 | MAT3( oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_ccf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:157:5: note: in expansion of macro 'MAT3' 157 | MAT3( ccf, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:156:5: note: in expansion of macro 'MAT3' 156 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fcf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:155:5: note: in expansion of macro 'MAT3' 155 | MAT3( fcf, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildAd.c:154:5: note: in expansion of macro 'MAT3' 154 | MAT3( fc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.c: In function 'Vparam_readXMLFile': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.c:389:69: warning: 'nalloc' may be used uninitialized in this function [-Wmaybe-uninitialized] 389 | tatoms = (Vparam_AtomData*)Vmem_malloc(thee->vmem, 2*nalloc, sizeof(Vparam_AtomData)); | ~^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.c:309:18: warning: 'natoms' may be used uninitialized in this function [-Wmaybe-uninitialized] 309 | int i, ires, natoms, nalloc, ralloc; | ^~~~~~ [ 28%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vgreen.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/generic && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vgreen.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c [ 29%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildBd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c: In function 'Vgreen_coulomb_direct': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:229:31: warning: unused variable 'fz' [-Wunused-variable] 229 | double *q, qtemp, fx, fy, fz; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:229:27: warning: unused variable 'fy' [-Wunused-variable] 229 | double *q, qtemp, fx, fy, fz; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:229:23: warning: unused variable 'fx' [-Wunused-variable] 229 | double *q, qtemp, fx, fy, fz; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:229:16: warning: unused variable 'qtemp' [-Wunused-variable] 229 | double *q, qtemp, fx, fy, fz; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:229:13: warning: unused variable 'q' [-Wunused-variable] 229 | double *q, qtemp, fx, fy, fz; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c: In function 'Vgreen_coulomb': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:264:9: warning: unused variable 'iatom' [-Wunused-variable] 264 | int iatom, ipos; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:263:31: warning: unused variable 'fz' [-Wunused-variable] 263 | double *q, qtemp, fx, fy, fz; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:263:27: warning: unused variable 'fy' [-Wunused-variable] 263 | double *q, qtemp, fx, fy, fz; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:263:23: warning: unused variable 'fx' [-Wunused-variable] 263 | double *q, qtemp, fx, fy, fz; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:263:16: warning: unused variable 'qtemp' [-Wunused-variable] 263 | double *q, qtemp, fx, fy, fz; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:263:13: warning: unused variable 'q' [-Wunused-variable] 263 | double *q, qtemp, fx, fy, fz; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:262:45: warning: unused variable 'scale' [-Wunused-variable] 262 | double *apos, charge, dist, dx, dy, dz, scale; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:262:41: warning: unused variable 'dz' [-Wunused-variable] 262 | double *apos, charge, dist, dx, dy, dz, scale; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:262:37: warning: unused variable 'dy' [-Wunused-variable] 262 | double *apos, charge, dist, dx, dy, dz, scale; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:262:33: warning: unused variable 'dx' [-Wunused-variable] 262 | double *apos, charge, dist, dx, dy, dz, scale; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:262:27: warning: unused variable 'dist' [-Wunused-variable] 262 | double *apos, charge, dist, dx, dy, dz, scale; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:262:19: warning: unused variable 'charge' [-Wunused-variable] 262 | double *apos, charge, dist, dx, dy, dz, scale; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:262:13: warning: unused variable 'apos' [-Wunused-variable] 262 | double *apos, charge, dist, dx, dy, dz, scale; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:261:12: warning: unused variable 'atom' [-Wunused-variable] 261 | Vatom *atom; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c: In function 'Vgreen_coulombD_direct': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:316:16: warning: unused variable 'qtemp' [-Wunused-variable] 316 | double *q, qtemp; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:316:13: warning: unused variable 'q' [-Wunused-variable] 316 | double *q, qtemp; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c: In function 'Vgreen_coulombD': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:368:9: warning: unused variable 'iatom' [-Wunused-variable] 368 | int iatom, ipos; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:367:16: warning: unused variable 'qtemp' [-Wunused-variable] 367 | double *q, qtemp; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:367:13: warning: unused variable 'q' [-Wunused-variable] 367 | double *q, qtemp; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:60: warning: unused variable 'scale' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:56: warning: unused variable 'dx' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:52: warning: unused variable 'dz' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:48: warning: unused variable 'dy' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:40: warning: unused variable 'idist3' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:33: warning: unused variable 'dist2' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:27: warning: unused variable 'dist' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:19: warning: unused variable 'charge' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:366:13: warning: unused variable 'apos' [-Wunused-variable] 366 | double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:365:12: warning: unused variable 'atom' [-Wunused-variable] 365 | Vatom *atom; | ^~~~ At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:525:14: warning: 'treecalc' defined but not used [-Wunused-function] 525 | VPRIVATE int treecalc(Vgreen *thee, double *xtar, double *ytar, double *ztar, | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:505:14: warning: 'treecleanup' defined but not used [-Wunused-function] 505 | VPRIVATE int treecleanup(Vgreen *thee) { | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vgreen.c:425:14: warning: 'treesetup' defined but not used [-Wunused-function] 425 | VPRIVATE int treesetup(Vgreen *thee) { | ^~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c: In function 'Vbuildband': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:65:5: note: in expansion of macro 'MAT2' 65 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c: In function 'Vbuildband1_7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:133:5: note: in expansion of macro 'MAT3' 133 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:132:5: note: in expansion of macro 'MAT3' 132 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:131:5: note: in expansion of macro 'MAT3' 131 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:130:5: note: in expansion of macro 'MAT3' 130 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_acB' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:128:5: note: in expansion of macro 'MAT2' 128 | MAT2(acB, *lda, *ny-1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c: In function 'Vbuildband1_27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:213:5: note: in expansion of macro 'MAT3' 213 | MAT3(uSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:212:5: note: in expansion of macro 'MAT3' 212 | MAT3(uSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:211:5: note: in expansion of macro 'MAT3' 211 | MAT3(uNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:210:5: note: in expansion of macro 'MAT3' 210 | MAT3(uNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:208:5: note: in expansion of macro 'MAT3' 208 | MAT3( uS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:207:5: note: in expansion of macro 'MAT3' 207 | MAT3( uN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:206:5: note: in expansion of macro 'MAT3' 206 | MAT3( uW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:205:5: note: in expansion of macro 'MAT3' 205 | MAT3( uE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:203:5: note: in expansion of macro 'MAT3' 203 | MAT3(oNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:202:5: note: in expansion of macro 'MAT3' 202 | MAT3(oNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:200:5: note: in expansion of macro 'MAT3' 200 | MAT3( uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:199:5: note: in expansion of macro 'MAT3' 199 | MAT3( oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:198:5: note: in expansion of macro 'MAT3' 198 | MAT3( oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:197:5: note: in expansion of macro 'MAT3' 197 | MAT3( oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_acB' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildBd.c:195:5: note: in expansion of macro 'MAT2' 195 | MAT2(acB, *lda, *ny-1); | ^~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 29%] Built target apbs_generic /usr/bin/gmake -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs_routines.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs_routines.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs_routines.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs_routines.dir/depend.internal". [ 30%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildGd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c Scanning dependencies of target apbs_routines gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 31%] Building C object src/CMakeFiles/apbs_routines.dir/routines.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_routines.dir/routines.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c: In function 'VbuildG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:64:5: note: in expansion of macro 'MAT2' 64 | MAT2( ac, *nxc * *nyc * *nzc, 27); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_acFF' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:63:5: note: in expansion of macro 'MAT2' 63 | MAT2(acFF, *nxf * *nyf * *nzf, 27); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pcFF' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:62:5: note: in expansion of macro 'MAT2' 62 | MAT2(pcFF, *nxc * *nyc * *nzc, 27); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c: In function 'VbuildG_1': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:216:5: note: in expansion of macro 'MAT3' 216 | MAT3(dPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:215:5: note: in expansion of macro 'MAT3' 215 | MAT3(dPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:214:5: note: in expansion of macro 'MAT3' 214 | MAT3(dPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:213:5: note: in expansion of macro 'MAT3' 213 | MAT3(dPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:212:5: note: in expansion of macro 'MAT3' 212 | MAT3( dPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:211:5: note: in expansion of macro 'MAT3' 211 | MAT3( dPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:210:5: note: in expansion of macro 'MAT3' 210 | MAT3( dPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:209:5: note: in expansion of macro 'MAT3' 209 | MAT3( dPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:208:5: note: in expansion of macro 'MAT3' 208 | MAT3( dPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:206:5: note: in expansion of macro 'MAT3' 206 | MAT3(uPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:205:5: note: in expansion of macro 'MAT3' 205 | MAT3(uPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:204:5: note: in expansion of macro 'MAT3' 204 | MAT3(uPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:203:5: note: in expansion of macro 'MAT3' 203 | MAT3(uPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:202:5: note: in expansion of macro 'MAT3' 202 | MAT3( uPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:201:5: note: in expansion of macro 'MAT3' 201 | MAT3( uPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:200:5: note: in expansion of macro 'MAT3' 200 | MAT3( uPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:199:5: note: in expansion of macro 'MAT3' 199 | MAT3( uPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:198:5: note: in expansion of macro 'MAT3' 198 | MAT3( uPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:196:5: note: in expansion of macro 'MAT3' 196 | MAT3(oPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:195:5: note: in expansion of macro 'MAT3' 195 | MAT3(oPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:194:5: note: in expansion of macro 'MAT3' 194 | MAT3(oPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:193:5: note: in expansion of macro 'MAT3' 193 | MAT3(oPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:192:5: note: in expansion of macro 'MAT3' 192 | MAT3( oPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:191:5: note: in expansion of macro 'MAT3' 191 | MAT3( oPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:190:5: note: in expansion of macro 'MAT3' 190 | MAT3( oPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:189:5: note: in expansion of macro 'MAT3' 189 | MAT3( oPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:188:5: note: in expansion of macro 'MAT3' 188 | MAT3( oPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:186:5: note: in expansion of macro 'MAT3' 186 | MAT3(XuSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:185:5: note: in expansion of macro 'MAT3' 185 | MAT3(XuSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:184:5: note: in expansion of macro 'MAT3' 184 | MAT3(XuNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:183:5: note: in expansion of macro 'MAT3' 183 | MAT3(XuNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:182:5: note: in expansion of macro 'MAT3' 182 | MAT3( XuS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:181:5: note: in expansion of macro 'MAT3' 181 | MAT3( XuN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:180:5: note: in expansion of macro 'MAT3' 180 | MAT3( XuW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:179:5: note: in expansion of macro 'MAT3' 179 | MAT3( XuE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:177:5: note: in expansion of macro 'MAT3' 177 | MAT3(XoNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:176:5: note: in expansion of macro 'MAT3' 176 | MAT3(XoNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:174:5: note: in expansion of macro 'MAT3' 174 | MAT3( XuC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:172:5: note: in expansion of macro 'MAT3' 172 | MAT3( XoN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:171:5: note: in expansion of macro 'MAT3' 171 | MAT3( XoE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:170:5: note: in expansion of macro 'MAT3' 170 | MAT3( XoC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:168:5: note: in expansion of macro 'MAT3' 168 | MAT3( oC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:164:21: warning: variable 'nzm1' set but not used [-Wunused-but-set-variable] 164 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:164:15: warning: variable 'nym1' set but not used [-Wunused-but-set-variable] 164 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:164:9: warning: variable 'nxm1' set but not used [-Wunused-but-set-variable] 164 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:163:33: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable] 163 | int iim1, iip1, jjm1, jjp1, kkm1, kkp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'loadDielMaps': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:296:17: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 296 | for (ii=0; ii<(nx*ny*nz); ii++) | ^~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c: In function 'VbuildG_7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:532:5: note: in expansion of macro 'MAT3' 532 | MAT3(dPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:531:5: note: in expansion of macro 'MAT3' 531 | MAT3(dPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:530:5: note: in expansion of macro 'MAT3' 530 | MAT3(dPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:529:5: note: in expansion of macro 'MAT3' 529 | MAT3(dPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:298:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 298 | sum = sum*hx*hy*hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:528:5: note: in expansion of macro 'MAT3' 528 | MAT3( dPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:527:5: note: in expansion of macro 'MAT3' 527 | MAT3( dPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:526:5: note: in expansion of macro 'MAT3' 526 | MAT3( dPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:525:5: note: in expansion of macro 'MAT3' 525 | MAT3( dPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:331:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 331 | for (ii=0; ii<(nx*ny*nz); ii++) | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:333:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 333 | sum = sum*hx*hy*hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:524:5: note: in expansion of macro 'MAT3' 524 | MAT3( dPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:522:5: note: in expansion of macro 'MAT3' 522 | MAT3(uPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:521:5: note: in expansion of macro 'MAT3' 521 | MAT3(uPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:520:5: note: in expansion of macro 'MAT3' 520 | MAT3(uPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:519:5: note: in expansion of macro 'MAT3' 519 | MAT3(uPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:518:5: note: in expansion of macro 'MAT3' 518 | MAT3( uPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:517:5: note: in expansion of macro 'MAT3' 517 | MAT3( uPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:516:5: note: in expansion of macro 'MAT3' 516 | MAT3( uPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:420:17: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 420 | for (ii=0; ii<(nx*ny*nz); ii++) | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:515:5: note: in expansion of macro 'MAT3' 515 | MAT3( uPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:422:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 422 | sum = sum*hx*hy*hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:514:5: note: in expansion of macro 'MAT3' 514 | MAT3( uPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:512:5: note: in expansion of macro 'MAT3' 512 | MAT3(oPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:511:5: note: in expansion of macro 'MAT3' 511 | MAT3(oPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:510:5: note: in expansion of macro 'MAT3' 510 | MAT3(oPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:454:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 454 | for (ii=0; ii<(nx*ny*nz); ii++) | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:509:5: note: in expansion of macro 'MAT3' 509 | MAT3(oPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:456:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 456 | sum = sum*hx*hy*hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:508:5: note: in expansion of macro 'MAT3' 508 | MAT3( oPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:507:5: note: in expansion of macro 'MAT3' 507 | MAT3( oPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:506:5: note: in expansion of macro 'MAT3' 506 | MAT3( oPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:505:5: note: in expansion of macro 'MAT3' 505 | MAT3( oPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:504:5: note: in expansion of macro 'MAT3' 504 | MAT3( oPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:502:5: note: in expansion of macro 'MAT3' 502 | MAT3(XuSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:501:5: note: in expansion of macro 'MAT3' 501 | MAT3(XuSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:500:5: note: in expansion of macro 'MAT3' 500 | MAT3(XuNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:499:5: note: in expansion of macro 'MAT3' 499 | MAT3(XuNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:498:5: note: in expansion of macro 'MAT3' 498 | MAT3( XuS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:497:5: note: in expansion of macro 'MAT3' 497 | MAT3( XuN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:496:5: note: in expansion of macro 'MAT3' 496 | MAT3( XuW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:495:5: note: in expansion of macro 'MAT3' 495 | MAT3( XuE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:494:5: note: in expansion of macro 'MAT3' 494 | MAT3( XuC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:492:5: note: in expansion of macro 'MAT3' 492 | MAT3(XoNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:491:5: note: in expansion of macro 'MAT3' 491 | MAT3(XoNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:490:5: note: in expansion of macro 'MAT3' 490 | MAT3( XoN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:489:5: note: in expansion of macro 'MAT3' 489 | MAT3( XoE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:488:5: note: in expansion of macro 'MAT3' 488 | MAT3( XoC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:486:5: note: in expansion of macro 'MAT3' 486 | MAT3( uC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:484:5: note: in expansion of macro 'MAT3' 484 | MAT3( oN, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:483:5: note: in expansion of macro 'MAT3' 483 | MAT3( oE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:482:5: note: in expansion of macro 'MAT3' 482 | MAT3( oC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:473:21: warning: variable 'nzm1' set but not used [-Wunused-but-set-variable] 473 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:473:15: warning: variable 'nym1' set but not used [-Wunused-but-set-variable] 473 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:473:9: warning: variable 'nxm1' set but not used [-Wunused-but-set-variable] 473 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:472:9: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable] 472 | int kkm1, kkp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:469:28: warning: variable 'kp2' set but not used [-Wunused-but-set-variable] 469 | int km1, kp1, km2, kp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:469:22: warning: variable 'km2' set but not used [-Wunused-but-set-variable] 469 | int km1, kp1, km2, kp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:468:28: warning: variable 'jp2' set but not used [-Wunused-but-set-variable] 468 | int jm1, jp1, jm2, jp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:467:28: warning: variable 'ip2' set but not used [-Wunused-but-set-variable] 467 | int im1, ip1, im2, ip2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'initMG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:1234:12: warning: variable 'iparm' set but not used [-Wunused-but-set-variable] 1234 | iparm, | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'energyMG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:1584:13: warning: variable 'mgparm' set but not used [-Wunused-but-set-variable] 1584 | MGparm *mgparm; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writematMG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:1803:10: warning: variable 'mxtype' set but not used [-Wunused-but-set-variable] 1803 | char mxtype[3]; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'printApolForce': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:3485:12: warning: variable 'scalar' set but not used [-Wunused-but-set-variable] 3485 | scalar, | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:3484:12: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 3484 | double temp, | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'initAPOL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4496:12: warning: variable 'sav' set but not used [-Wunused-but-set-variable] 4496 | sav, /**< @todo document */ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4495:12: warning: variable 'sasa' set but not used [-Wunused-but-set-variable] 4495 | double sasa, /**< @todo document */ | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4489:12: warning: unused variable 'ts' [-Wunused-variable] 4489 | time_t ts; /**< Temporary timing variable for debugging (PCE) */ | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'forceAPOL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4753:13: warning: unused variable 'apos' [-Wunused-variable] 4753 | *apos; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4737:46: warning: unused variable 'ts_sub' [-Wunused-variable] 4737 | time_t ts, ts_main, ts_sub; | ^~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c: In function 'VbuildG_27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1380:5: note: in expansion of macro 'MAT3' 1380 | MAT3(dPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1379:5: note: in expansion of macro 'MAT3' 1379 | MAT3(dPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1378:5: note: in expansion of macro 'MAT3' 1378 | MAT3(dPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1377:5: note: in expansion of macro 'MAT3' 1377 | MAT3(dPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1376:5: note: in expansion of macro 'MAT3' 1376 | MAT3( dPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1375:5: note: in expansion of macro 'MAT3' 1375 | MAT3( dPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1374:5: note: in expansion of macro 'MAT3' 1374 | MAT3( dPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1373:5: note: in expansion of macro 'MAT3' 1373 | MAT3( dPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1372:5: note: in expansion of macro 'MAT3' 1372 | MAT3( dPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1370:5: note: in expansion of macro 'MAT3' 1370 | MAT3(uPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1369:5: note: in expansion of macro 'MAT3' 1369 | MAT3(uPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1368:5: note: in expansion of macro 'MAT3' 1368 | MAT3(uPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1367:5: note: in expansion of macro 'MAT3' 1367 | MAT3(uPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1366:5: note: in expansion of macro 'MAT3' 1366 | MAT3( uPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1365:5: note: in expansion of macro 'MAT3' 1365 | MAT3( uPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1364:5: note: in expansion of macro 'MAT3' 1364 | MAT3( uPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1363:5: note: in expansion of macro 'MAT3' 1363 | MAT3( uPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1362:5: note: in expansion of macro 'MAT3' 1362 | MAT3( uPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1360:5: note: in expansion of macro 'MAT3' 1360 | MAT3(oPSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1359:5: note: in expansion of macro 'MAT3' 1359 | MAT3(oPSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1358:5: note: in expansion of macro 'MAT3' 1358 | MAT3(oPNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1357:5: note: in expansion of macro 'MAT3' 1357 | MAT3(oPNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1356:5: note: in expansion of macro 'MAT3' 1356 | MAT3( oPW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1355:5: note: in expansion of macro 'MAT3' 1355 | MAT3( oPE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1354:5: note: in expansion of macro 'MAT3' 1354 | MAT3( oPS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1353:5: note: in expansion of macro 'MAT3' 1353 | MAT3( oPN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1352:5: note: in expansion of macro 'MAT3' 1352 | MAT3( oPC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1350:5: note: in expansion of macro 'MAT3' 1350 | MAT3(XuSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1349:5: note: in expansion of macro 'MAT3' 1349 | MAT3(XuSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1348:5: note: in expansion of macro 'MAT3' 1348 | MAT3(XuNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1347:5: note: in expansion of macro 'MAT3' 1347 | MAT3(XuNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1346:5: note: in expansion of macro 'MAT3' 1346 | MAT3( XuS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1345:5: note: in expansion of macro 'MAT3' 1345 | MAT3( XuN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1344:5: note: in expansion of macro 'MAT3' 1344 | MAT3( XuW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1343:5: note: in expansion of macro 'MAT3' 1343 | MAT3( XuE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1342:5: note: in expansion of macro 'MAT3' 1342 | MAT3( XuC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1340:5: note: in expansion of macro 'MAT3' 1340 | MAT3(XoNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1339:5: note: in expansion of macro 'MAT3' 1339 | MAT3(XoNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1338:5: note: in expansion of macro 'MAT3' 1338 | MAT3( XoN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1337:5: note: in expansion of macro 'MAT3' 1337 | MAT3( XoE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1336:5: note: in expansion of macro 'MAT3' 1336 | MAT3( XoC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1334:5: note: in expansion of macro 'MAT3' 1334 | MAT3( uSW, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1333:5: note: in expansion of macro 'MAT3' 1333 | MAT3( uSE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1332:5: note: in expansion of macro 'MAT3' 1332 | MAT3( uNW, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1331:5: note: in expansion of macro 'MAT3' 1331 | MAT3( uNE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1330:5: note: in expansion of macro 'MAT3' 1330 | MAT3( uS, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1329:5: note: in expansion of macro 'MAT3' 1329 | MAT3( uN, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1328:5: note: in expansion of macro 'MAT3' 1328 | MAT3( uW, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1327:5: note: in expansion of macro 'MAT3' 1327 | MAT3( uE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1326:5: note: in expansion of macro 'MAT3' 1326 | MAT3( uC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1324:5: note: in expansion of macro 'MAT3' 1324 | MAT3( oNW, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1323:5: note: in expansion of macro 'MAT3' 1323 | MAT3( oNE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1322:5: note: in expansion of macro 'MAT3' 1322 | MAT3( oN, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1321:5: note: in expansion of macro 'MAT3' 1321 | MAT3( oE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1320:5: note: in expansion of macro 'MAT3' 1320 | MAT3( oC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1277:21: warning: variable 'nzm1' set but not used [-Wunused-but-set-variable] 1277 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1277:15: warning: variable 'nym1' set but not used [-Wunused-but-set-variable] 1277 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1277:9: warning: variable 'nxm1' set but not used [-Wunused-but-set-variable] 1277 | int nxm1, nym1, nzm1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1276:9: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable] 1276 | int kkm1, kkp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1273:28: warning: variable 'kp2' set but not used [-Wunused-but-set-variable] 1273 | int km1, kp1, km2, kp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildGd.c:1273:22: warning: variable 'km2' set but not used [-Wunused-but-set-variable] 1273 | int km1, kp1, km2, kp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writematMG.part.0': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:1840:30: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 1840 | sprintf(outpath, "%s.%s", writematstem, "mat"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writedataMG.part.0': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2676:30: warning: '%s' directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2676 | sprintf(outpath, "%s.%s", writestem, "dxbin"); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 7 and 1030 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2720:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2720 | sprintf(outpath, "%s.%s", writestem, "txt"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2711:38: warning: '%s' directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2711 | sprintf(outpath, "%s.%s", writestem, "dx.gz"); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 7 and 1030 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2694:38: warning: '%s' directive writing 4 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2694 | sprintf(outpath, "%s.%s", writestem, "mcsf"); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 6 and 1029 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2687:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2687 | sprintf(outpath, "%s.%s", writestem, "ucd"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2701:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2701 | sprintf(outpath, "%s.%s", writestem, "grd"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2666:38: warning: '%s' directive writing 2 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2666 | sprintf(outpath, "%s.%s", writestem, "dx"); | ^~ ~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 4 and 1027 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writedataFlat': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2105:33: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2105 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writedataXML': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2363:33: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2363 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'returnEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2778:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2778 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'printEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2839:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2839 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'printElecEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2904:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2904 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'printApolEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2970:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2970 | gtenergy += (scalar * ((apolparm->gamma*apolparm->sasa) + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2971 | (apolparm->press*apolparm->sav) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2972 | (apolparm->wcaEnergy))); | ~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'initAPOL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4547:30: warning: 'center' may be used uninitialized [-Wmaybe-uninitialized] 4547 | disp[0] = (x - center[0]); | ~~~~~~^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4516:12: note: 'center' declared here 4516 | center[3], /**< @todo document */ | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4548:30: warning: 'center' may be used uninitialized [-Wmaybe-uninitialized] 4548 | disp[1] = (y - center[1]); | ~~~~~~^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4516:12: note: 'center' declared here 4516 | center[3], /**< @todo document */ | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4549:30: warning: 'center' may be used uninitialized [-Wmaybe-uninitialized] 4549 | disp[2] = (z - center[2]); | ~~~~~~^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4516:12: note: 'center' declared here 4516 | center[3], /**< @todo document */ | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 4590 | atomData = Vparam_getAtomData(param, "WAT", "OW"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: note: referencing argument 2 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 3 [-Wstringop-overflow=] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: note: referencing argument 3 of type 'char *' In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/apolparm.h:73, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:73, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.h:304:27: note: in a call to function 'Vparam_getAtomData' 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 4591 | if (atomData == VNULL) atomData = Vparam_getAtomData(param, "WAT", "O"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: note: referencing argument 2 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 2 [-Wstringop-overflow=] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: note: referencing argument 3 of type 'char *' In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/apolparm.h:73, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:73, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.h:304:27: note: in a call to function 'Vparam_getAtomData' 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 31%] Built target apbs_routines /usr/bin/gmake -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/python /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". Scanning dependencies of target apbslib_swig_compilation gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 32%] Swig compile apbslib.i for python cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python && /usr/bin/cmake -E make_directory /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python && /usr/bin/cmake -E touch /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON.stamp cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig/4.0.2 /usr/bin/swig -python -outdir /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python -interface _apbslib -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -I/usr/include/python3.9 -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/python -o /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/python/apbslib.i gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 32%] Built target apbslib_swig_compilation /usr/bin/gmake -f contrib/iapbs/src/CMakeFiles/iapbs.dir/build.make contrib/iapbs/src/CMakeFiles/iapbs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src/CMakeFiles/iapbs.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src/CMakeFiles/iapbs.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src/CMakeFiles/iapbs.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src/CMakeFiles/iapbs.dir/depend.internal". Scanning dependencies of target iapbs gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f contrib/iapbs/src/CMakeFiles/iapbs.dir/build.make contrib/iapbs/src/CMakeFiles/iapbs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 34%] Building C object contrib/iapbs/src/CMakeFiles/iapbs.dir/apbs_driver.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/iapbs.dir/apbs_driver.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:57:21: warning: argument 23 of type 'double[1]' with mismatched bound [-Warray-parameter=] 57 | double esenergy[1], | ~~~~~~~^~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:19: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.h:173:30: note: previously declared as 'double[20]' 173 | double esEnergy[NOSH_MAXCALC], | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:58:21: warning: argument 24 of type 'double[1]' with mismatched bound [-Warray-parameter=] 58 | double npenergy[1], | ~~~~~~~^~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:19: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.h:174:30: note: previously declared as 'double[20]' 174 | double npEnergy[NOSH_MAXCALC], | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c: In function 'apbsdrv_': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:278:5: warning: multi-line comment [-Wcomment] 278 | // Vnm_print(1,"\nError you must provide a parameter file if you\n" \ | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:110:21: warning: unused variable 'isolve' [-Wunused-variable] 110 | int rank, size, isolve, debug, natom; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:98:11: warning: unused variable 'gm' [-Wunused-variable] 98 | void *gm[NOSH_MAXMOL]; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:97:11: warning: variable 'fetk' set but not used [-Wunused-but-set-variable] 97 | void *fetk[NOSH_MAXCALC]; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:85:14: warning: unused variable 'feparm' [-Wunused-variable] 85 | FEMparm *feparm = VNULL; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c: In function 'setupString': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:938:64: warning: implicit declaration of function 'getpid' [-Wimplicit-function-declaration] 938 | sprintf(string, "%swrite pot dx iapbs-pot-%d\n", string, getpid()); | ^~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:11: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:11: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:11: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:11: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c: In function 'getElecEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:1055:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 1055 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c: In function 'apbsdrv_': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/contrib/iapbs/src/apbs_driver.c:549:56: warning: 'outputformat' may be used uninitialized [-Wmaybe-uninitialized] 549 | if ((pbeparm->calcenergy == PCE_COMPS) && (outputformat != OUTPUT_NULL)){ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 35%] Linking C static library ../../../lib/libiapbs.a cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src && /usr/bin/cmake -P CMakeFiles/iapbs.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/contrib/iapbs/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/iapbs.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libiapbs.a CMakeFiles/iapbs.dir/apbs_driver.c.o /usr/bin/ranlib ../../../lib/libiapbs.a gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 35%] Built target iapbs [ 36%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildPd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.h:58, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c: In function 'VbuildP': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:67:5: note: in expansion of macro 'MAT2' 67 | MAT2(ac, *nxf * *nyf * *nzf, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:66:5: note: in expansion of macro 'MAT2' 66 | MAT2(pc, *nxc * *nyc * *nzc, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c: In function 'VbuildP_trilin': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:101:5: note: in expansion of macro 'MAT2' 101 | MAT2(pc, *nxc * *nyc * *nzc, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c: In function 'VbuildPb_trilin': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:163:5: note: in expansion of macro 'MAT3' 163 | MAT3(dPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:162:5: note: in expansion of macro 'MAT3' 162 | MAT3(dPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:161:5: note: in expansion of macro 'MAT3' 161 | MAT3(dPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:160:5: note: in expansion of macro 'MAT3' 160 | MAT3(dPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:158:5: note: in expansion of macro 'MAT3' 158 | MAT3( dPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:157:5: note: in expansion of macro 'MAT3' 157 | MAT3( dPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:156:5: note: in expansion of macro 'MAT3' 156 | MAT3( dPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:155:5: note: in expansion of macro 'MAT3' 155 | MAT3( dPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:154:5: note: in expansion of macro 'MAT3' 154 | MAT3( dPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:152:5: note: in expansion of macro 'MAT3' 152 | MAT3(uPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:151:5: note: in expansion of macro 'MAT3' 151 | MAT3(uPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:150:5: note: in expansion of macro 'MAT3' 150 | MAT3(uPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:149:5: note: in expansion of macro 'MAT3' 149 | MAT3(uPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:147:5: note: in expansion of macro 'MAT3' 147 | MAT3( uPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:146:5: note: in expansion of macro 'MAT3' 146 | MAT3( uPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:145:5: note: in expansion of macro 'MAT3' 145 | MAT3( uPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:144:5: note: in expansion of macro 'MAT3' 144 | MAT3( uPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:143:5: note: in expansion of macro 'MAT3' 143 | MAT3( uPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:141:5: note: in expansion of macro 'MAT3' 141 | MAT3(oPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:140:5: note: in expansion of macro 'MAT3' 140 | MAT3(oPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:139:5: note: in expansion of macro 'MAT3' 139 | MAT3(oPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:138:5: note: in expansion of macro 'MAT3' 138 | MAT3(oPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:136:5: note: in expansion of macro 'MAT3' 136 | MAT3( oPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:135:5: note: in expansion of macro 'MAT3' 135 | MAT3( oPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:134:5: note: in expansion of macro 'MAT3' 134 | MAT3( oPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:133:5: note: in expansion of macro 'MAT3' 133 | MAT3( oPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:132:5: note: in expansion of macro 'MAT3' 132 | MAT3( oPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c: In function 'VbuildP_op7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:212:5: note: in expansion of macro 'MAT2' 212 | MAT2(pc, *nxc * *nyc * *nzc, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:211:5: note: in expansion of macro 'MAT2' 211 | MAT2(ac, *nxf * *nyf * *nzf, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c: In function 'VbuildPb_op7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:287:5: note: in expansion of macro 'MAT3' 287 | MAT3(dPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:286:5: note: in expansion of macro 'MAT3' 286 | MAT3(dPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:285:5: note: in expansion of macro 'MAT3' 285 | MAT3(dPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:284:5: note: in expansion of macro 'MAT3' 284 | MAT3(dPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:283:5: note: in expansion of macro 'MAT3' 283 | MAT3( dPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:282:5: note: in expansion of macro 'MAT3' 282 | MAT3( dPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:281:5: note: in expansion of macro 'MAT3' 281 | MAT3( dPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:280:5: note: in expansion of macro 'MAT3' 280 | MAT3( dPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:279:5: note: in expansion of macro 'MAT3' 279 | MAT3( dPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:278:5: note: in expansion of macro 'MAT3' 278 | MAT3(uPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:277:5: note: in expansion of macro 'MAT3' 277 | MAT3(uPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:276:5: note: in expansion of macro 'MAT3' 276 | MAT3(uPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:275:5: note: in expansion of macro 'MAT3' 275 | MAT3(uPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:274:5: note: in expansion of macro 'MAT3' 274 | MAT3( uPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:273:5: note: in expansion of macro 'MAT3' 273 | MAT3( uPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:272:5: note: in expansion of macro 'MAT3' 272 | MAT3( uPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:271:5: note: in expansion of macro 'MAT3' 271 | MAT3( uPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:270:5: note: in expansion of macro 'MAT3' 270 | MAT3( uPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:269:5: note: in expansion of macro 'MAT3' 269 | MAT3(oPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:268:5: note: in expansion of macro 'MAT3' 268 | MAT3(oPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:267:5: note: in expansion of macro 'MAT3' 267 | MAT3(oPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:266:5: note: in expansion of macro 'MAT3' 266 | MAT3(oPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:265:5: note: in expansion of macro 'MAT3' 265 | MAT3( oPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:264:5: note: in expansion of macro 'MAT3' 264 | MAT3( oPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:263:5: note: in expansion of macro 'MAT3' 263 | MAT3( oPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:262:5: note: in expansion of macro 'MAT3' 262 | MAT3( oPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:261:5: note: in expansion of macro 'MAT3' 261 | MAT3( oPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:260:5: note: in expansion of macro 'MAT3' 260 | MAT3( uC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:259:5: note: in expansion of macro 'MAT3' 259 | MAT3( oN, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:258:5: note: in expansion of macro 'MAT3' 258 | MAT3( oE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:257:5: note: in expansion of macro 'MAT3' 257 | MAT3( oC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:255:32: warning: variable 'eighth' set but not used [-Wunused-but-set-variable] 255 | double won, half, quarter, eighth; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:255:23: warning: variable 'quarter' set but not used [-Wunused-but-set-variable] 255 | double won, half, quarter, eighth; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:255:17: warning: variable 'half' set but not used [-Wunused-but-set-variable] 255 | double won, half, quarter, eighth; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:253:15: warning: variable 'kkp1' set but not used [-Wunused-but-set-variable] 253 | int kkm1, kkp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:253:9: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable] 253 | int kkm1, kkp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:252:15: warning: variable 'jjp1' set but not used [-Wunused-but-set-variable] 252 | int jjm1, jjp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:252:9: warning: variable 'jjm1' set but not used [-Wunused-but-set-variable] 252 | int jjm1, jjp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:251:15: warning: variable 'iip1' set but not used [-Wunused-but-set-variable] 251 | int iim1, iip1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:251:9: warning: variable 'iim1' set but not used [-Wunused-but-set-variable] 251 | int iim1, iip1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:250:16: warning: variable 'kp2' set but not used [-Wunused-but-set-variable] 250 | int km2, kp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:250:10: warning: variable 'km2' set but not used [-Wunused-but-set-variable] 250 | int km2, kp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:248:16: warning: variable 'jp2' set but not used [-Wunused-but-set-variable] 248 | int jm2, jp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:248:10: warning: variable 'jm2' set but not used [-Wunused-but-set-variable] 248 | int jm2, jp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:246:16: warning: variable 'ip2' set but not used [-Wunused-but-set-variable] 246 | int im2, ip2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:246:10: warning: variable 'im2' set but not used [-Wunused-but-set-variable] 246 | int im2, ip2; | ^~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.h:58, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c: In function 'VbuildP_op27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:728:5: note: in expansion of macro 'MAT2' 728 | MAT2(pc, *nxc * *nyc * *nzc, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:727:5: note: in expansion of macro 'MAT2' 727 | MAT2(ac, *nxf * *nyf * *nzf, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c: In function 'VbuildPb_op27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:818:7: note: in expansion of macro 'MAT3' 818 | MAT3(dPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:817:7: note: in expansion of macro 'MAT3' 817 | MAT3(dPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:816:7: note: in expansion of macro 'MAT3' 816 | MAT3(dPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:815:7: note: in expansion of macro 'MAT3' 815 | MAT3(dPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:814:7: note: in expansion of macro 'MAT3' 814 | MAT3( dPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:813:7: note: in expansion of macro 'MAT3' 813 | MAT3( dPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:812:7: note: in expansion of macro 'MAT3' 812 | MAT3( dPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:811:7: note: in expansion of macro 'MAT3' 811 | MAT3( dPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:810:7: note: in expansion of macro 'MAT3' 810 | MAT3( dPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:809:7: note: in expansion of macro 'MAT3' 809 | MAT3(uPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:808:7: note: in expansion of macro 'MAT3' 808 | MAT3(uPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:807:7: note: in expansion of macro 'MAT3' 807 | MAT3(uPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:806:7: note: in expansion of macro 'MAT3' 806 | MAT3(uPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:805:7: note: in expansion of macro 'MAT3' 805 | MAT3( uPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:804:7: note: in expansion of macro 'MAT3' 804 | MAT3( uPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:803:7: note: in expansion of macro 'MAT3' 803 | MAT3( uPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:802:7: note: in expansion of macro 'MAT3' 802 | MAT3( uPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:801:7: note: in expansion of macro 'MAT3' 801 | MAT3( uPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:800:7: note: in expansion of macro 'MAT3' 800 | MAT3(oPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:799:7: note: in expansion of macro 'MAT3' 799 | MAT3(oPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:798:7: note: in expansion of macro 'MAT3' 798 | MAT3(oPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:797:7: note: in expansion of macro 'MAT3' 797 | MAT3(oPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:796:7: note: in expansion of macro 'MAT3' 796 | MAT3( oPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:795:7: note: in expansion of macro 'MAT3' 795 | MAT3( oPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:794:7: note: in expansion of macro 'MAT3' 794 | MAT3( oPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:793:7: note: in expansion of macro 'MAT3' 793 | MAT3( oPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:792:7: note: in expansion of macro 'MAT3' 792 | MAT3( oPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:791:7: note: in expansion of macro 'MAT3' 791 | MAT3( uSW, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:790:7: note: in expansion of macro 'MAT3' 790 | MAT3( uSE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:789:7: note: in expansion of macro 'MAT3' 789 | MAT3( uNW, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:788:7: note: in expansion of macro 'MAT3' 788 | MAT3( uNE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:787:7: note: in expansion of macro 'MAT3' 787 | MAT3( uS, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:786:7: note: in expansion of macro 'MAT3' 786 | MAT3( uN, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:785:7: note: in expansion of macro 'MAT3' 785 | MAT3( uW, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:784:7: note: in expansion of macro 'MAT3' 784 | MAT3( uE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:783:7: note: in expansion of macro 'MAT3' 783 | MAT3( oNW, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:782:7: note: in expansion of macro 'MAT3' 782 | MAT3( oNE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:781:7: note: in expansion of macro 'MAT3' 781 | MAT3( uC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:780:7: note: in expansion of macro 'MAT3' 780 | MAT3( oN, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:779:7: note: in expansion of macro 'MAT3' 779 | MAT3( oE, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:778:7: note: in expansion of macro 'MAT3' 778 | MAT3( oC, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:776:34: warning: variable 'eighth' set but not used [-Wunused-but-set-variable] 776 | double won, half, quarter, eighth; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:776:25: warning: variable 'quarter' set but not used [-Wunused-but-set-variable] 776 | double won, half, quarter, eighth; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:776:19: warning: variable 'half' set but not used [-Wunused-but-set-variable] 776 | double won, half, quarter, eighth; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:774:17: warning: variable 'kkp1' set but not used [-Wunused-but-set-variable] 774 | int kkm1, kkp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:774:11: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable] 774 | int kkm1, kkp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:773:17: warning: variable 'jjp1' set but not used [-Wunused-but-set-variable] 773 | int jjm1, jjp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:773:11: warning: variable 'jjm1' set but not used [-Wunused-but-set-variable] 773 | int jjm1, jjp1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:772:17: warning: variable 'iip1' set but not used [-Wunused-but-set-variable] 772 | int iim1, iip1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:772:11: warning: variable 'iim1' set but not used [-Wunused-but-set-variable] 772 | int iim1, iip1; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:771:18: warning: variable 'kp2' set but not used [-Wunused-but-set-variable] 771 | int km2, kp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:771:12: warning: variable 'km2' set but not used [-Wunused-but-set-variable] 771 | int km2, kp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:769:18: warning: variable 'jp2' set but not used [-Wunused-but-set-variable] 769 | int jm2, jp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:769:12: warning: variable 'jm2' set but not used [-Wunused-but-set-variable] 769 | int jm2, jp2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:767:18: warning: variable 'ip2' set but not used [-Wunused-but-set-variable] 767 | int im2, ip2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/buildPd.c:767:12: warning: variable 'im2' set but not used [-Wunused-but-set-variable] 767 | int im2, ip2; | ^~~ [ 37%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/cgd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/cgd.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/cgd.c: In function 'Vcghs': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/cgd.c:99:24: warning: 'rhok1' may be used uninitialized in this function [-Wmaybe-uninitialized] 99 | beta = rhok2 / rhok1; | ~~~~~~^~~~~~~ [ 38%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/gsd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c: In function 'Vgsrb': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:67:5: note: in expansion of macro 'MAT2' 67 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c: In function 'Vgsrb7x': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:116:5: note: in expansion of macro 'MAT3' 116 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:115:5: note: in expansion of macro 'MAT3' 115 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:114:5: note: in expansion of macro 'MAT3' 114 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:113:5: note: in expansion of macro 'MAT3' 113 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:111:5: note: in expansion of macro 'MAT3' 111 | MAT3( r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_r' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:111:5: note: in expansion of macro 'MAT3' 111 | MAT3( r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_r' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:111:5: note: in expansion of macro 'MAT3' 111 | MAT3( r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w2' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:110:5: note: in expansion of macro 'MAT3' 110 | MAT3(w2, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_w2' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:110:5: note: in expansion of macro 'MAT3' 110 | MAT3(w2, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_w2' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:110:5: note: in expansion of macro 'MAT3' 110 | MAT3(w2, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:109:5: note: in expansion of macro 'MAT3' 109 | MAT3(w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_w1' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:109:5: note: in expansion of macro 'MAT3' 109 | MAT3(w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_w1' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:109:5: note: in expansion of macro 'MAT3' 109 | MAT3(w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:108:5: note: in expansion of macro 'MAT3' 108 | MAT3( x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:107:5: note: in expansion of macro 'MAT3' 107 | MAT3(fc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:106:5: note: in expansion of macro 'MAT3' 106 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c: In function 'Vgsrb27x': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:208:5: note: in expansion of macro 'MAT3' 208 | MAT3(uSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:207:5: note: in expansion of macro 'MAT3' 207 | MAT3(uSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:206:5: note: in expansion of macro 'MAT3' 206 | MAT3(uNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:205:5: note: in expansion of macro 'MAT3' 205 | MAT3(uNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:204:5: note: in expansion of macro 'MAT3' 204 | MAT3( uS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:203:5: note: in expansion of macro 'MAT3' 203 | MAT3( uN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:202:5: note: in expansion of macro 'MAT3' 202 | MAT3( uW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:201:5: note: in expansion of macro 'MAT3' 201 | MAT3( uE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:199:5: note: in expansion of macro 'MAT3' 199 | MAT3(oNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:198:5: note: in expansion of macro 'MAT3' 198 | MAT3(oNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:196:5: note: in expansion of macro 'MAT3' 196 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:195:5: note: in expansion of macro 'MAT3' 195 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:194:5: note: in expansion of macro 'MAT3' 194 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:193:5: note: in expansion of macro 'MAT3' 193 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:191:5: note: in expansion of macro 'MAT3' 191 | MAT3( r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_r' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:191:5: note: in expansion of macro 'MAT3' 191 | MAT3( r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_r' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:191:5: note: in expansion of macro 'MAT3' 191 | MAT3( r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w2' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:190:5: note: in expansion of macro 'MAT3' 190 | MAT3(w2, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_w2' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:190:5: note: in expansion of macro 'MAT3' 190 | MAT3(w2, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_w2' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:190:5: note: in expansion of macro 'MAT3' 190 | MAT3(w2, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:189:5: note: in expansion of macro 'MAT3' 189 | MAT3(w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_w1' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:189:5: note: in expansion of macro 'MAT3' 189 | MAT3(w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_w1' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:189:5: note: in expansion of macro 'MAT3' 189 | MAT3(w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:188:5: note: in expansion of macro 'MAT3' 188 | MAT3( x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:187:5: note: in expansion of macro 'MAT3' 187 | MAT3(fc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:186:5: note: in expansion of macro 'MAT3' 186 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:182:9: warning: variable 'istep' set but not used [-Wunused-but-set-variable] 182 | int istep; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:180:17: warning: variable 'k2' set but not used [-Wunused-but-set-variable] 180 | int i2, j2, k2; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:180:13: warning: variable 'j2' set but not used [-Wunused-but-set-variable] 180 | int i2, j2, k2; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:180:9: warning: variable 'i2' set but not used [-Wunused-but-set-variable] 180 | int i2, j2, k2; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:179:17: warning: variable 'k1' set but not used [-Wunused-but-set-variable] 179 | int i1, j1, k1; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:179:13: warning: variable 'j1' set but not used [-Wunused-but-set-variable] 179 | int i1, j1, k1; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/gsd.c:179:9: warning: variable 'i1' set but not used [-Wunused-but-set-variable] 179 | int i1, j1, k1; | ^~ [ 40%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/matvecd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c [ 41%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgcsd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgcsd.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.h:55, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vmatvec7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:87:5: note: in expansion of macro 'MAT2' 87 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vmatvec7_1s': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:112:5: note: in expansion of macro 'MAT3' 112 | MAT3(y, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:111:5: note: in expansion of macro 'MAT3' 111 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:110:5: note: in expansion of macro 'MAT3' 110 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:109:5: note: in expansion of macro 'MAT3' 109 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:108:5: note: in expansion of macro 'MAT3' 108 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:107:5: note: in expansion of macro 'MAT3' 107 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:106:5: note: in expansion of macro 'MAT3' 106 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vmatvec27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:139:5: note: in expansion of macro 'MAT2' 139 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vmatvec27_1s': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:184:5: note: in expansion of macro 'MAT3' 184 | MAT3(uSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:183:5: note: in expansion of macro 'MAT3' 183 | MAT3(uSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:182:5: note: in expansion of macro 'MAT3' 182 | MAT3(uNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:181:5: note: in expansion of macro 'MAT3' 181 | MAT3(uNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:180:5: note: in expansion of macro 'MAT3' 180 | MAT3(uS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:179:5: note: in expansion of macro 'MAT3' 179 | MAT3(uN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:178:5: note: in expansion of macro 'MAT3' 178 | MAT3(uW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:177:5: note: in expansion of macro 'MAT3' 177 | MAT3(uE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:176:5: note: in expansion of macro 'MAT3' 176 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:174:5: note: in expansion of macro 'MAT3' 174 | MAT3(oNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:173:5: note: in expansion of macro 'MAT3' 173 | MAT3(oNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:172:5: note: in expansion of macro 'MAT3' 172 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:171:5: note: in expansion of macro 'MAT3' 171 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:170:5: note: in expansion of macro 'MAT3' 170 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:168:5: note: in expansion of macro 'MAT3' 168 | MAT3(y, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:167:5: note: in expansion of macro 'MAT3' 167 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:166:5: note: in expansion of macro 'MAT3' 166 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vnmatvec7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:263:5: note: in expansion of macro 'MAT2' 263 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vnmatvecd7_1s': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:292:5: note: in expansion of macro 'MAT3' 292 | MAT3(w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:291:5: note: in expansion of macro 'MAT3' 291 | MAT3( y, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:290:5: note: in expansion of macro 'MAT3' 290 | MAT3( x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:289:5: note: in expansion of macro 'MAT3' 289 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:288:5: note: in expansion of macro 'MAT3' 288 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_cc' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:288:5: note: in expansion of macro 'MAT3' 288 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_cc' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:288:5: note: in expansion of macro 'MAT3' 288 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:287:5: note: in expansion of macro 'MAT3' 287 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:286:5: note: in expansion of macro 'MAT3' 286 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:285:5: note: in expansion of macro 'MAT3' 285 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vnmatvec27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:322:5: note: in expansion of macro 'MAT2' 322 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vnmatvecd27_1s': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:370:5: note: in expansion of macro 'MAT3' 370 | MAT3( w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:369:5: note: in expansion of macro 'MAT3' 369 | MAT3( y, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:368:5: note: in expansion of macro 'MAT3' 368 | MAT3( x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:367:5: note: in expansion of macro 'MAT3' 367 | MAT3( oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:366:5: note: in expansion of macro 'MAT3' 366 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_cc' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:366:5: note: in expansion of macro 'MAT3' 366 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_cc' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:366:5: note: in expansion of macro 'MAT3' 366 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:365:5: note: in expansion of macro 'MAT3' 365 | MAT3(uSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:364:5: note: in expansion of macro 'MAT3' 364 | MAT3(uSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:363:5: note: in expansion of macro 'MAT3' 363 | MAT3(uNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:362:5: note: in expansion of macro 'MAT3' 362 | MAT3(uNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:361:5: note: in expansion of macro 'MAT3' 361 | MAT3( uS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:360:5: note: in expansion of macro 'MAT3' 360 | MAT3( uN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:359:5: note: in expansion of macro 'MAT3' 359 | MAT3( uW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:358:5: note: in expansion of macro 'MAT3' 358 | MAT3( uE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:357:5: note: in expansion of macro 'MAT3' 357 | MAT3(oNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:356:5: note: in expansion of macro 'MAT3' 356 | MAT3(oNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:355:5: note: in expansion of macro 'MAT3' 355 | MAT3( uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:354:5: note: in expansion of macro 'MAT3' 354 | MAT3( oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:353:5: note: in expansion of macro 'MAT3' 353 | MAT3( oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vmresid7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:451:5: note: in expansion of macro 'MAT2' 451 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vmresid7_1s': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:476:5: note: in expansion of macro 'MAT3' 476 | MAT3(r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:475:5: note: in expansion of macro 'MAT3' 475 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:474:5: note: in expansion of macro 'MAT3' 474 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:473:5: note: in expansion of macro 'MAT3' 473 | MAT3(fc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:472:5: note: in expansion of macro 'MAT3' 472 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:471:5: note: in expansion of macro 'MAT3' 471 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:470:5: note: in expansion of macro 'MAT3' 470 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:469:5: note: in expansion of macro 'MAT3' 469 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vmresid27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:503:5: note: in expansion of macro 'MAT2' 503 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vmresid27_1s': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:550:5: note: in expansion of macro 'MAT3' 550 | MAT3(uSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:549:5: note: in expansion of macro 'MAT3' 549 | MAT3(uSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:548:5: note: in expansion of macro 'MAT3' 548 | MAT3(uNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:547:5: note: in expansion of macro 'MAT3' 547 | MAT3(uNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:546:5: note: in expansion of macro 'MAT3' 546 | MAT3(uS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:545:5: note: in expansion of macro 'MAT3' 545 | MAT3(uN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:544:5: note: in expansion of macro 'MAT3' 544 | MAT3(uW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:543:5: note: in expansion of macro 'MAT3' 543 | MAT3(uE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:542:5: note: in expansion of macro 'MAT3' 542 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:540:5: note: in expansion of macro 'MAT3' 540 | MAT3(oNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:539:5: note: in expansion of macro 'MAT3' 539 | MAT3(oNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:538:5: note: in expansion of macro 'MAT3' 538 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:537:5: note: in expansion of macro 'MAT3' 537 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:536:5: note: in expansion of macro 'MAT3' 536 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:534:5: note: in expansion of macro 'MAT3' 534 | MAT3(r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:533:5: note: in expansion of macro 'MAT3' 533 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:532:5: note: in expansion of macro 'MAT3' 532 | MAT3(fc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:531:5: note: in expansion of macro 'MAT3' 531 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vnmresid7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:623:5: note: in expansion of macro 'MAT2' 623 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vnmresid7_1s': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:650:5: note: in expansion of macro 'MAT3' 650 | MAT3(w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:649:5: note: in expansion of macro 'MAT3' 649 | MAT3( r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:648:5: note: in expansion of macro 'MAT3' 648 | MAT3( x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:647:5: note: in expansion of macro 'MAT3' 647 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:646:5: note: in expansion of macro 'MAT3' 646 | MAT3(fc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:645:5: note: in expansion of macro 'MAT3' 645 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_cc' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:645:5: note: in expansion of macro 'MAT3' 645 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_cc' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:645:5: note: in expansion of macro 'MAT3' 645 | MAT3(cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:644:5: note: in expansion of macro 'MAT3' 644 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:643:5: note: in expansion of macro 'MAT3' 643 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:642:5: note: in expansion of macro 'MAT3' 642 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vnmresid27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:681:5: note: in expansion of macro 'MAT2' 681 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vnmresid27_1s': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:727:5: note: in expansion of macro 'MAT3' 727 | MAT3( w1, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:726:5: note: in expansion of macro 'MAT3' 726 | MAT3( r, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:725:5: note: in expansion of macro 'MAT3' 725 | MAT3( x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:724:5: note: in expansion of macro 'MAT3' 724 | MAT3(uSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:723:5: note: in expansion of macro 'MAT3' 723 | MAT3(uSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:722:5: note: in expansion of macro 'MAT3' 722 | MAT3(uNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:721:5: note: in expansion of macro 'MAT3' 721 | MAT3(uNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:720:5: note: in expansion of macro 'MAT3' 720 | MAT3( uS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:719:5: note: in expansion of macro 'MAT3' 719 | MAT3( uN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:718:5: note: in expansion of macro 'MAT3' 718 | MAT3( uW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:717:5: note: in expansion of macro 'MAT3' 717 | MAT3( uE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:716:5: note: in expansion of macro 'MAT3' 716 | MAT3(oNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:715:5: note: in expansion of macro 'MAT3' 715 | MAT3(oNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:714:5: note: in expansion of macro 'MAT3' 714 | MAT3( uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:713:5: note: in expansion of macro 'MAT3' 713 | MAT3( oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:712:5: note: in expansion of macro 'MAT3' 712 | MAT3( oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:711:5: note: in expansion of macro 'MAT3' 711 | MAT3( fc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:710:5: note: in expansion of macro 'MAT3' 710 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_cc' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:710:5: note: in expansion of macro 'MAT3' 710 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_cc' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:710:5: note: in expansion of macro 'MAT3' 710 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:709:5: note: in expansion of macro 'MAT3' 709 | MAT3( oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vrestrc': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:786:5: note: in expansion of macro 'MAT2' 786 | MAT2(pc, *nxc * *nyc * *nzc, 1 ); | ^~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgcsd.h:58, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgcsd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgcsd.c: In function 'Vmvcs': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgcsd.c:99:5: note: in expansion of macro 'MAT2' 99 | MAT2(iz, 50, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vrestrc2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:852:5: note: in expansion of macro 'MAT3' 852 | MAT3(dPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:851:5: note: in expansion of macro 'MAT3' 851 | MAT3(dPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:850:5: note: in expansion of macro 'MAT3' 850 | MAT3(dPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:849:5: note: in expansion of macro 'MAT3' 849 | MAT3(dPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:847:5: note: in expansion of macro 'MAT3' 847 | MAT3(dPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:846:5: note: in expansion of macro 'MAT3' 846 | MAT3(dPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:845:5: note: in expansion of macro 'MAT3' 845 | MAT3(dPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:844:5: note: in expansion of macro 'MAT3' 844 | MAT3(dPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:843:5: note: in expansion of macro 'MAT3' 843 | MAT3(dPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:841:5: note: in expansion of macro 'MAT3' 841 | MAT3(uPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:840:5: note: in expansion of macro 'MAT3' 840 | MAT3(uPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:839:5: note: in expansion of macro 'MAT3' 839 | MAT3(uPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:838:5: note: in expansion of macro 'MAT3' 838 | MAT3(uPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:836:5: note: in expansion of macro 'MAT3' 836 | MAT3(uPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:835:5: note: in expansion of macro 'MAT3' 835 | MAT3(uPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:834:5: note: in expansion of macro 'MAT3' 834 | MAT3(uPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:833:5: note: in expansion of macro 'MAT3' 833 | MAT3(uPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:832:5: note: in expansion of macro 'MAT3' 832 | MAT3(uPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:830:5: note: in expansion of macro 'MAT3' 830 | MAT3(oPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:829:5: note: in expansion of macro 'MAT3' 829 | MAT3(oPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:828:5: note: in expansion of macro 'MAT3' 828 | MAT3(oPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:827:5: note: in expansion of macro 'MAT3' 827 | MAT3(oPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:825:5: note: in expansion of macro 'MAT3' 825 | MAT3(oPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:824:5: note: in expansion of macro 'MAT3' 824 | MAT3(oPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:823:5: note: in expansion of macro 'MAT3' 823 | MAT3(oPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:822:5: note: in expansion of macro 'MAT3' 822 | MAT3(oPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:821:5: note: in expansion of macro 'MAT3' 821 | MAT3(oPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xout' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:819:5: note: in expansion of macro 'MAT3' 819 | MAT3(xout, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xin' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:818:5: note: in expansion of macro 'MAT3' 818 | MAT3(xin, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:816:12: warning: variable 'dimfac' set but not used [-Wunused-but-set-variable] 816 | double dimfac; | ^~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.h:55, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'VinterpPMG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:920:5: note: in expansion of macro 'MAT2' 920 | MAT2(pc, *nxc * *nyc * *nzc, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'VinterpPMG2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:982:5: note: in expansion of macro 'MAT3' 982 | MAT3(dPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:981:5: note: in expansion of macro 'MAT3' 981 | MAT3(dPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:980:5: note: in expansion of macro 'MAT3' 980 | MAT3(dPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:979:5: note: in expansion of macro 'MAT3' 979 | MAT3(dPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:977:5: note: in expansion of macro 'MAT3' 977 | MAT3( dPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:976:5: note: in expansion of macro 'MAT3' 976 | MAT3( dPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:975:5: note: in expansion of macro 'MAT3' 975 | MAT3( dPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:974:5: note: in expansion of macro 'MAT3' 974 | MAT3( dPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:973:5: note: in expansion of macro 'MAT3' 973 | MAT3( dPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:971:5: note: in expansion of macro 'MAT3' 971 | MAT3(uPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:970:5: note: in expansion of macro 'MAT3' 970 | MAT3(uPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:969:5: note: in expansion of macro 'MAT3' 969 | MAT3(uPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:968:5: note: in expansion of macro 'MAT3' 968 | MAT3(uPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:966:5: note: in expansion of macro 'MAT3' 966 | MAT3( uPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:965:5: note: in expansion of macro 'MAT3' 965 | MAT3( uPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:964:5: note: in expansion of macro 'MAT3' 964 | MAT3( uPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:963:5: note: in expansion of macro 'MAT3' 963 | MAT3( uPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:962:5: note: in expansion of macro 'MAT3' 962 | MAT3( uPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:960:5: note: in expansion of macro 'MAT3' 960 | MAT3(oPSW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:959:5: note: in expansion of macro 'MAT3' 959 | MAT3(oPSE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:958:5: note: in expansion of macro 'MAT3' 958 | MAT3(oPNW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:957:5: note: in expansion of macro 'MAT3' 957 | MAT3(oPNE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:955:5: note: in expansion of macro 'MAT3' 955 | MAT3( oPW, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:954:5: note: in expansion of macro 'MAT3' 954 | MAT3( oPE, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:953:5: note: in expansion of macro 'MAT3' 953 | MAT3( oPS, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:952:5: note: in expansion of macro 'MAT3' 952 | MAT3( oPN, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:951:5: note: in expansion of macro 'MAT3' 951 | MAT3( oPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_oPC' [-Wunused-variable] 78 | int dy_##mat = dy; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:951:5: note: in expansion of macro 'MAT3' 951 | MAT3( oPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_oPC' [-Wunused-variable] 77 | int dx_##mat = dx; \ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:951:5: note: in expansion of macro 'MAT3' 951 | MAT3( oPC, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xout' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:949:5: note: in expansion of macro 'MAT3' 949 | MAT3(xout, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xin' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:948:5: note: in expansion of macro 'MAT3' 948 | MAT3( xin, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c: In function 'Vextrac': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xout' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:1086:5: note: in expansion of macro 'MAT3' 1086 | MAT3(xout, *nxc, *nyc, *nzc); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xin' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/matvecd.c:1085:5: note: in expansion of macro 'MAT3' 1085 | MAT3( xin, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgcsd.c:303:13: warning: 'rsnrm' may be used uninitialized in this function [-Wmaybe-uninitialized] 303 | Vprtstp(*iok, *iters, rsnrm, rsden, orsnrm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgcsd.c:562:37: warning: 'rsden' may be used uninitialized in this function [-Wmaybe-uninitialized] 562 | } while (*iters<*itmax && (rsnrm/rsden) > *errtol); | ~~~~~~^~~~~~~ [ 42%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c: In function 'Vmgdriv': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:85:9: warning: unused variable 'ierror' [-Wunused-variable] 85 | int ierror = 0; | ^~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.h:62, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c: In function 'Vmgdriv2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:267:5: note: in expansion of macro 'MAT2' 267 | MAT2(iz, 50, nlev); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:234:12: warning: unused variable 'tsolve' [-Wunused-variable] 234 | double tsolve = 0.0; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:233:12: warning: unused variable 'tsetupc' [-Wunused-variable] 233 | double tsetupc = 0.0; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:232:12: warning: unused variable 'tsetupf' [-Wunused-variable] 232 | double tsetupf = 0.0; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:231:12: warning: unused variable 'oh' [-Wunused-variable] 231 | double oh = 0.0; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:230:12: warning: unused variable 'bf' [-Wunused-variable] 230 | double bf = 0.0; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:226:12: warning: unused variable 'epsmac' [-Wunused-variable] 226 | double epsmac = 0.0; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c: In function 'Vmgsz': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:655:26: warning: 'num_narrc_oper' may be used uninitialized [-Wmaybe-uninitialized] 655 | + (num_narrc + num_narrc_oper) * *narrc | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:656:13: warning: 'n_band' may be used uninitialized in this function [-Wmaybe-uninitialized] 653 | *iretot = num_narr * *narr | ~~~~~~~~~~~~~~~~ 654 | + (num_nf + num_nf_oper) * *nf | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 | + (num_narrc + num_narrc_oper) * *narrc | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 | + n_band | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgdrvd.c:654:41: warning: 'num_nf_oper' may be used uninitialized in this function [-Wmaybe-uninitialized] 654 | + (num_nf + num_nf_oper) * *nf | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ [ 43%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.h:58, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c: In function 'Vbuildops': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:83:5: note: in expansion of macro 'MAT2' 83 | MAT2(iz, 50, *nlev); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c: In function 'Vbuildstr': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:266:5: note: in expansion of macro 'MAT2' 266 | MAT2(iz, 50, *nlev); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c: In function 'Vbuildcopy0': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fcf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:628:5: note: in expansion of macro 'MAT3' 628 | MAT3( fcf, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_ccf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:627:5: note: in expansion of macro 'MAT3' 627 | MAT3( ccf, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_tcf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:626:5: note: in expansion of macro 'MAT3' 626 | MAT3( tcf, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a3cf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:625:5: note: in expansion of macro 'MAT3' 625 | MAT3(a3cf, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a2cf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:624:5: note: in expansion of macro 'MAT3' 624 | MAT3(a2cf, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a1cf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:623:5: note: in expansion of macro 'MAT3' 623 | MAT3(a1cf, *nxf, *nyf, *nzf); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gzcf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:622:5: note: in expansion of macro 'MAT3' 622 | MAT3(gzcf, *nxf, *nyf, 4); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gycf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:621:5: note: in expansion of macro 'MAT3' 621 | MAT3(gycf, *nxf, *nzf, 4); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gxcf' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:620:5: note: in expansion of macro 'MAT3' 620 | MAT3(gxcf, *nyf, *nzf, 4); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_tc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:619:5: note: in expansion of macro 'MAT3' 619 | MAT3( tc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:618:5: note: in expansion of macro 'MAT3' 618 | MAT3( fc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:617:5: note: in expansion of macro 'MAT3' 617 | MAT3( cc, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a3c' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:616:5: note: in expansion of macro 'MAT3' 616 | MAT3( a3c, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a2c' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:615:5: note: in expansion of macro 'MAT3' 615 | MAT3( a2c, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a1c' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:614:5: note: in expansion of macro 'MAT3' 614 | MAT3( a1c, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gzc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:613:5: note: in expansion of macro 'MAT3' 613 | MAT3( gzc, *nx, *ny, 4); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gyc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:612:5: note: in expansion of macro 'MAT3' 612 | MAT3( gyc, *nx, *nz, 4); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gxc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:611:5: note: in expansion of macro 'MAT3' 611 | MAT3( gxc, *ny, *nz, 4); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c: In function 'Vbuildalg': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgsubd.c:914:5: note: in expansion of macro 'MAT2' 914 | MAT2(iz, 50, *nlev); | ^~~~ [ 44%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.h:58, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vxcopy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:60:5: note: in expansion of macro 'MAT3' 60 | MAT3(y, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:59:5: note: in expansion of macro 'MAT3' 59 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vxcopy_small': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:78:5: note: in expansion of macro 'MAT3' 78 | MAT3(y, *nx - 2, *ny - 2, *nz - 2); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:77:5: note: in expansion of macro 'MAT3' 77 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vxcopy_large': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:99:5: note: in expansion of macro 'MAT3' 99 | MAT3(y, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:98:5: note: in expansion of macro 'MAT3' 98 | MAT3(x, *nx - 2, *ny - 2, *nz - 2); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vxaxpy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:117:5: note: in expansion of macro 'MAT3' 117 | MAT3(y, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:116:5: note: in expansion of macro 'MAT3' 116 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vxnrm1': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:136:5: note: in expansion of macro 'MAT3' 136 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vxnrm2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:157:5: note: in expansion of macro 'MAT3' 157 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vxdot': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:182:5: note: in expansion of macro 'MAT3' 182 | MAT3(y, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:181:5: note: in expansion of macro 'MAT3' 181 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vazeros': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:198:9: warning: unused variable 'nproc' [-Wunused-variable] 198 | int nproc = 1; | ^~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.h:58, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'VfboundPMG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gzc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:218:5: note: in expansion of macro 'MAT3' 218 | MAT3(gzc, *nx, *ny, 2); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gyc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:217:5: note: in expansion of macro 'MAT3' 217 | MAT3(gyc, *nx, *nz, 2); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gxc' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:216:5: note: in expansion of macro 'MAT3' 216 | MAT3(gxc, *ny, *nz, 2); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:215:5: note: in expansion of macro 'MAT3' 215 | MAT3( x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'VfboundPMG00': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:262:5: note: in expansion of macro 'MAT3' 262 | MAT3( x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vaxrand': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:295:12: warning: variable 'xdum' set but not used [-Wunused-but-set-variable] 295 | double xdum; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:293:33: warning: variable 'iflag' set but not used [-Wunused-but-set-variable] 293 | int n, i, ii, ipara, ivect, iflag; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:293:26: warning: variable 'ivect' set but not used [-Wunused-but-set-variable] 293 | int n, i, ii, ipara, ivect, iflag; | ^~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.h:58, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vxscal': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:322:5: note: in expansion of macro 'MAT3' 322 | MAT3(x, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vprtmatd': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:337:5: note: in expansion of macro 'MAT2' 337 | MAT2(ac, *nx * *ny * *nz, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vprtmatd7': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:370:5: note: in expansion of macro 'MAT3' 370 | MAT3(uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:369:5: note: in expansion of macro 'MAT3' 369 | MAT3(oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:368:5: note: in expansion of macro 'MAT3' 368 | MAT3(oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:367:5: note: in expansion of macro 'MAT3' 367 | MAT3(oC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c: In function 'Vprtmatd27': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:415:5: note: in expansion of macro 'MAT3' 415 | MAT3(uSW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:414:5: note: in expansion of macro 'MAT3' 414 | MAT3(uSE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:413:5: note: in expansion of macro 'MAT3' 413 | MAT3(uNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:412:5: note: in expansion of macro 'MAT3' 412 | MAT3(uNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:411:5: note: in expansion of macro 'MAT3' 411 | MAT3( uS, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:410:5: note: in expansion of macro 'MAT3' 410 | MAT3( uN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:409:5: note: in expansion of macro 'MAT3' 409 | MAT3( uW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:408:5: note: in expansion of macro 'MAT3' 408 | MAT3( uE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:407:5: note: in expansion of macro 'MAT3' 407 | MAT3(oNW, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:406:5: note: in expansion of macro 'MAT3' 406 | MAT3(oNE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:405:5: note: in expansion of macro 'MAT3' 405 | MAT3( uC, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:404:5: note: in expansion of macro 'MAT3' 404 | MAT3( oN, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:403:5: note: in expansion of macro 'MAT3' 403 | MAT3( oE, *nx, *ny, *nz); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mikpckd.c:402:5: note: in expansion of macro 'MAT3' 402 | MAT3( oC, *nx, *ny, *nz); | ^~~~ [ 45%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mlinpckd.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mlinpckd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mlinpckd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mlinpckd.c: In function 'Vdpbsl': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_abd' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mlinpckd.c:62:5: note: in expansion of macro 'MAT2' 62 | MAT2(abd, *lda, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mlinpckd.c: In function 'Vdpbfa': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_abd' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mlinpckd.c:199:5: note: in expansion of macro 'MAT2' 199 | MAT2(abd, *lda, 1); | ^~~~ [ 47%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mypdec.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c [ 48%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/newtond.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c: In function 'Vmypdefinitsmpbe': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:96:9: warning: unused variable 'i' [-Wunused-variable] 96 | int i; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c: In function 'Vc_vecsmpbe': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:223:26: warning: variable 'ivect' set but not used [-Wunused-but-set-variable] 223 | int n, i, ii, ipara, ivect; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:223:19: warning: variable 'ipara' set but not used [-Wunused-but-set-variable] 223 | int n, i, ii, ipara, ivect; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:223:15: warning: unused variable 'ii' [-Wunused-variable] 223 | int n, i, ii, ipara, ivect; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:222:9: warning: unused variable 'iion' [-Wunused-variable] 222 | int iion; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:219:28: warning: unused variable 'fact' [-Wunused-variable] 219 | double argument, poly, fact; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:219:22: warning: unused variable 'poly' [-Wunused-variable] 219 | double argument, poly, fact; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:219:12: warning: unused variable 'argument' [-Wunused-variable] 219 | double argument, poly, fact; | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:218:29: warning: unused variable 'am_pos' [-Wunused-variable] 218 | double am_zero, am_neg, am_pos; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:218:21: warning: unused variable 'am_neg' [-Wunused-variable] 218 | double am_zero, am_neg, am_pos; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:217:18: warning: unused variable 'zu2' [-Wunused-variable] 217 | double zcf2, zu2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:217:12: warning: unused variable 'zcf2' [-Wunused-variable] 217 | double zcf2, zu2; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:216:9: warning: unused variable 'ideg' [-Wunused-variable] 216 | int ideg; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c: In function 'Vdc_vec': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:345:9: warning: unused variable 'n' [-Wunused-variable] 345 | int n = *nx * *ny * *nz; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:344:9: warning: unused variable 'i' [-Wunused-variable] 344 | int i; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c: In function 'Vdc_vecpmg': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:360:28: warning: unused variable 'fact' [-Wunused-variable] 360 | double argument, poly, fact; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:360:22: warning: unused variable 'poly' [-Wunused-variable] 360 | double argument, poly, fact; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:357:9: warning: unused variable 'ideg' [-Wunused-variable] 357 | int ideg, iion; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c: In function 'Vdc_vecsmpbe': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:433:16: warning: variable 'ivect' set but not used [-Wunused-but-set-variable] 433 | int ipara, ivect; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:433:9: warning: variable 'ipara' set but not used [-Wunused-but-set-variable] 433 | int ipara, ivect; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:432:15: warning: unused variable 'ii' [-Wunused-variable] 432 | int n, i, ii; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:429:28: warning: unused variable 'fact' [-Wunused-variable] 429 | double argument, poly, fact; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:429:22: warning: unused variable 'poly' [-Wunused-variable] 429 | double argument, poly, fact; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:429:12: warning: unused variable 'argument' [-Wunused-variable] 429 | double argument, poly, fact; | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:428:29: warning: unused variable 'am_pos' [-Wunused-variable] 428 | double am_zero, am_neg, am_pos; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:428:21: warning: unused variable 'am_neg' [-Wunused-variable] 428 | double am_zero, am_neg, am_pos; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:427:18: warning: unused variable 'zu2' [-Wunused-variable] 427 | double zcf2, zu2; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:427:12: warning: unused variable 'zcf2' [-Wunused-variable] 427 | double zcf2, zu2; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:426:15: warning: unused variable 'iion' [-Wunused-variable] 426 | int ideg, iion; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mypdec.c:426:9: warning: unused variable 'ideg' [-Wunused-variable] 426 | int ideg, iion; | ^~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.c:56: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.c: In function 'Vfnewton': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.c:77:5: note: in expansion of macro 'MAT2' 77 | MAT2( iz, 50, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.c: In function 'Vnewton': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.c:187:5: note: in expansion of macro 'MAT2' 187 | MAT2(iz, 50, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.c: In function 'Vgetjac': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newtond.c:560:5: note: in expansion of macro 'MAT2' 560 | MAT2(iz, 50, 1); | ^~~~ [ 49%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/newdrvd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c [ 50%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/powerd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c: In function 'Vnewdriv': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:86:9: warning: unused variable 'maxlev' [-Wunused-variable] 86 | int maxlev; /// @todo: Doc | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:85:9: warning: unused variable 'ierror' [-Wunused-variable] 85 | int ierror; /// @todo: Doc | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c: In function 'Vnewdriv2': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:223:9: warning: unused variable 'i' [-Wunused-variable] 223 | int i; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:221:12: warning: unused variable 'orsnrm_t' [-Wunused-variable] 221 | double orsnrm_t; | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:220:12: warning: unused variable 'rsden_t' [-Wunused-variable] 220 | double rsden_t; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:219:12: warning: unused variable 'rsnrm_t' [-Wunused-variable] 219 | double rsnrm_t; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:218:9: warning: unused variable 'iters_t' [-Wunused-variable] 218 | int iters_t; | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:217:9: warning: unused variable 'iok_t' [-Wunused-variable] 217 | int iok_t; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:215:9: warning: unused variable 'numlev' [-Wunused-variable] 215 | int numlev; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:210:12: warning: unused variable 'tsolve' [-Wunused-variable] 210 | double tsolve; /// @todo: Doc | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:209:12: warning: unused variable 'tsetupc' [-Wunused-variable] 209 | double tsetupc; /// @todo: Doc | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:208:12: warning: unused variable 'tsetupf' [-Wunused-variable] 208 | double tsetupf; /// @todo: Doc | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:207:12: warning: unused variable 'oh' [-Wunused-variable] 207 | double oh; /// @todo: Doc | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:206:12: warning: unused variable 'bf' [-Wunused-variable] 206 | double bf; /// @todo: Doc | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:204:12: warning: variable 'omegal' set but not used [-Wunused-but-set-variable] 204 | double omegal; /// @todo: Doc | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/newdrvd.c:202:12: warning: unused variable 'epsmac' [-Wunused-variable] 202 | double epsmac; /// @todo: Doc | ^~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c: In function 'Vpower': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c:74:5: note: in expansion of macro 'MAT2' 74 | MAT2(iz, 50, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c:71:9: warning: unused variable 'skipIters' [-Wunused-variable] 71 | int skipIters = 0; | ^~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c: In function 'Vipower': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c:188:5: note: in expansion of macro 'MAT2' 188 | MAT2(iz, 50, 1); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c: In function 'Vmpower': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/powerd.c:311:5: note: in expansion of macro 'MAT2' 311 | MAT2(iz, 50, 1); | ^~~~ [ 51%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/smoothd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/smoothd.c [ 52%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/pmgc && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/smoothd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c: In function 'Vfmvfas': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c:79:5: note: in expansion of macro 'MAT2' 79 | MAT2(iz, 50, *nlev); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c:74:12: warning: variable 'errd' set but not used [-Wunused-but-set-variable] 74 | double errd; | ^~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/smoothd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.h:57, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c:55: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c: In function 'Vmvfas': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable] 66 | int dy_##mat = dy | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c:182:5: note: in expansion of macro 'MAT2' 182 | MAT2(iz, 50, *nlev); | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c:171:33: warning: unused variable 'ivariv' [-Wunused-variable] 171 | int itmax_s, iters_s, nuuu, ivariv, mgsmoo_s, iresid; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c:359:13: warning: 'rsnrm' may be used uninitialized in this function [-Wmaybe-uninitialized] 359 | Vprtstp(*iok, *iters, rsnrm, rsden, orsnrm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/pmgc/mgfasd.c:597:24: warning: 'rsden' may be used uninitialized in this function [-Wmaybe-uninitialized] 597 | if ((rsnrm / rsden) <= *errtol) | ~~~~~~~^~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 52%] Built target apbs_pmgc /usr/bin/gmake -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/depend /usr/bin/gmake -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/python /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/DependInfo.cmake --color= cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs.dir/depend.internal". Scanning dependencies of target apbs gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' Scanning dependencies of target _apbslib gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 54%] Linking C shared library ../lib/libapbs.so /usr/bin/gmake -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/build cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs.dir/link.txt --verbose=1 gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gcc -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libapbs.so.1 -o ../lib/libapbs.so.1 generic/CMakeFiles/apbs_generic.dir/nosh.c.o generic/CMakeFiles/apbs_generic.dir/mgparm.c.o generic/CMakeFiles/apbs_generic.dir/femparm.c.o generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o generic/CMakeFiles/apbs_generic.dir/bemparm.c.o generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o generic/CMakeFiles/apbs_generic.dir/apolparm.c.o generic/CMakeFiles/apbs_generic.dir/vacc.c.o generic/CMakeFiles/apbs_generic.dir/valist.c.o generic/CMakeFiles/apbs_generic.dir/vatom.c.o generic/CMakeFiles/apbs_generic.dir/vpbe.c.o generic/CMakeFiles/apbs_generic.dir/vcap.c.o generic/CMakeFiles/apbs_generic.dir/vclist.c.o generic/CMakeFiles/apbs_generic.dir/vstring.c.o generic/CMakeFiles/apbs_generic.dir/vparam.c.o generic/CMakeFiles/apbs_generic.dir/vgreen.c.o pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o mg/CMakeFiles/apbs_mg.dir/vgrid.c.o mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o mg/CMakeFiles/apbs_mg.dir/vopot.c.o mg/CMakeFiles/apbs_mg.dir/vpmg.c.o mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o [ 55%] Building C object tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python && /usr/bin/gcc -D_apbslib_EXPORTS -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -I/usr/include/python3.9 -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/python -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIC -fopenmp -o CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c: In function 'getPotentials': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3264:12: warning: unused variable 'rc' [-Wunused-variable] 3264 | int i, rc, nx, ny, nz; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c: In function 'getForces': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3318:31: warning: unused variable 'npholder' [-Wunused-variable] 3318 | PyObject *npvalues, *np, *npholder; | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3318:26: warning: unused variable 'np' [-Wunused-variable] 3318 | PyObject *npvalues, *np, *npholder; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3318:15: warning: unused variable 'npvalues' [-Wunused-variable] 3318 | PyObject *npvalues, *np, *npholder; | ^~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:2727: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:2727: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:2727: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:2727: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 56%] Linking C shared library ../../lib/_apbslib.so cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/_apbslib.dir/link.txt --verbose=1 /usr/bin/gcc -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,_apbslib.so -o ../../lib/_apbslib.so CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/bemparm.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/apolparm.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/valist.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/vatom.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/vpbe.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/vcap.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/vclist.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/vstring.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/vparam.c.o ../../src/generic/CMakeFiles/apbs_generic.dir/vgreen.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o ../../src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o ../../src/mg/CMakeFiles/apbs_mg.dir/vgrid.c.o ../../src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o ../../src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o ../../src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o ../../src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o ../../src/CMakeFiles/apbs_routines.dir/routines.c.o -lm -lstdc++ -lmaloc -fopenmp /usr/lib64/libpython3.9.so cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library ../lib/libapbs.so.1 ../lib/libapbs.so.1 ../lib/libapbs.so gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 56%] Built target apbs /usr/bin/gmake -f src/CMakeFiles/apbs-bin.dir/build.make src/CMakeFiles/apbs-bin.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs-bin.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs-bin.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs-bin.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src/CMakeFiles/apbs-bin.dir/depend.internal". Scanning dependencies of target apbs-bin gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/apbs-bin.dir/build.make src/CMakeFiles/apbs-bin.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 57%] Building C object src/CMakeFiles/apbs-bin.dir/main.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/apbs-bin.dir/main.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:117:11: warning: unused variable 'gm' [-Wunused-variable] 117 | void *gm[NOSH_MAXMOL]; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:116:11: warning: variable 'fetk' set but not used [-Wunused-but-set-variable] 116 | void *fetk[NOSH_MAXCALC]; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:96:18: warning: unused variable 'geoflowparm' [-Wunused-variable] 96 | GEOFLOWparm *geoflowparm = VNULL; | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:92:14: warning: unused variable 'feparm' [-Wunused-variable] 92 | FEMparm *feparm = VNULL; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:86:17: warning: unused variable 'te' [-Wunused-variable] 86 | clock_t ts, te; | ^~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:70: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:70: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:70: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/main.c:70: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building C object src/CMakeFiles/apbs-bin.dir/routines.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/apbs-bin.dir/routines.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'loadDielMaps': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:296:17: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 296 | for (ii=0; ii<(nx*ny*nz); ii++) | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:298:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 298 | sum = sum*hx*hy*hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:331:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 331 | for (ii=0; ii<(nx*ny*nz); ii++) | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:333:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 333 | sum = sum*hx*hy*hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:420:17: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 420 | for (ii=0; ii<(nx*ny*nz); ii++) | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:422:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 422 | sum = sum*hx*hy*hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:454:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 454 | for (ii=0; ii<(nx*ny*nz); ii++) | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:456:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 456 | sum = sum*hx*hy*hzed; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'initMG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:1234:12: warning: variable 'iparm' set but not used [-Wunused-but-set-variable] 1234 | iparm, | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'energyMG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:1584:13: warning: variable 'mgparm' set but not used [-Wunused-but-set-variable] 1584 | MGparm *mgparm; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writematMG': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:1803:10: warning: variable 'mxtype' set but not used [-Wunused-but-set-variable] 1803 | char mxtype[3]; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'printApolForce': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:3485:12: warning: variable 'scalar' set but not used [-Wunused-but-set-variable] 3485 | scalar, | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:3484:12: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 3484 | double temp, | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'initAPOL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4496:12: warning: variable 'sav' set but not used [-Wunused-but-set-variable] 4496 | sav, /**< @todo document */ | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4495:12: warning: variable 'sasa' set but not used [-Wunused-but-set-variable] 4495 | double sasa, /**< @todo document */ | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4489:12: warning: unused variable 'ts' [-Wunused-variable] 4489 | time_t ts; /**< Temporary timing variable for debugging (PCE) */ | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'forceAPOL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4753:13: warning: unused variable 'apos' [-Wunused-variable] 4753 | *apos; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4737:46: warning: unused variable 'ts_sub' [-Wunused-variable] 4737 | time_t ts, ts_main, ts_sub; | ^~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writematMG.part.0': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:1840:30: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 1840 | sprintf(outpath, "%s.%s", writematstem, "mat"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writedataMG.part.0': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2676:30: warning: '%s' directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2676 | sprintf(outpath, "%s.%s", writestem, "dxbin"); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 7 and 1030 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2720:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2720 | sprintf(outpath, "%s.%s", writestem, "txt"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2711:38: warning: '%s' directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2711 | sprintf(outpath, "%s.%s", writestem, "dx.gz"); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 7 and 1030 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2694:38: warning: '%s' directive writing 4 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2694 | sprintf(outpath, "%s.%s", writestem, "mcsf"); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 6 and 1029 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2687:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2687 | sprintf(outpath, "%s.%s", writestem, "ucd"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2701:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2701 | sprintf(outpath, "%s.%s", writestem, "grd"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2666:38: warning: '%s' directive writing 2 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2666 | sprintf(outpath, "%s.%s", writestem, "dx"); | ^~ ~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /usr/include/bits/stdio2.h:38:10: note: '__sprintf_chk' output between 4 and 1027 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'initAPOL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 4590 | atomData = Vparam_getAtomData(param, "WAT", "OW"); | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: note: referencing argument 2 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 3 [-Wstringop-overflow=] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: note: referencing argument 3 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.c:267:26: note: in a call to function 'Vparam_getAtomData' 267 | VPUBLIC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 4591 | if (atomData == VNULL) atomData = Vparam_getAtomData(param, "WAT", "O"); | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: note: referencing argument 2 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 2 [-Wstringop-overflow=] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: note: referencing argument 3 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.c:267:26: note: in a call to function 'Vparam_getAtomData' 267 | VPUBLIC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writedataFlat': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2105:33: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2105 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'writedataXML': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2363:33: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2363 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'returnEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2778:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2778 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'printEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2839:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2839 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'printElecEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2904:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2904 | ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na * /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'printApolEnergy': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:2970:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized] 2970 | gtenergy += (scalar * ((apolparm->gamma*apolparm->sasa) + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2971 | (apolparm->press*apolparm->sav) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2972 | (apolparm->wcaEnergy))); | ~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'initAPOL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4547:30: warning: 'center' may be used uninitialized [-Wmaybe-uninitialized] 4547 | disp[0] = (x - center[0]); | ~~~~~~^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4516:12: note: 'center' declared here 4516 | center[3], /**< @todo document */ | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4548:30: warning: 'center' may be used uninitialized [-Wmaybe-uninitialized] 4548 | disp[1] = (y - center[1]); | ~~~~~~^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4516:12: note: 'center' declared here 4516 | center[3], /**< @todo document */ | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4549:30: warning: 'center' may be used uninitialized [-Wmaybe-uninitialized] 4549 | disp[2] = (z - center[2]); | ~~~~~~^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4516:12: note: 'center' declared here 4516 | center[3], /**< @todo document */ | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 4590 | atomData = Vparam_getAtomData(param, "WAT", "OW"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: note: referencing argument 2 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 3 [-Wstringop-overflow=] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: note: referencing argument 3 of type 'char *' In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/apolparm.h:73, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:73, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.h:304:27: note: in a call to function 'Vparam_getAtomData' 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 4591 | if (atomData == VNULL) atomData = Vparam_getAtomData(param, "WAT", "O"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: note: referencing argument 2 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 2 [-Wstringop-overflow=] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: note: referencing argument 3 of type 'char *' In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/apolparm.h:73, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:73, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.h:64, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:54: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.h:304:27: note: in a call to function 'Vparam_getAtomData' 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^~~~~~~~~~~~~~~~~~ [ 60%] Linking C executable ../bin/apbs cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs-bin.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/apbs-bin.dir/main.c.o CMakeFiles/apbs-bin.dir/routines.c.o -o ../bin/apbs -lm -lstdc++ -lmaloc -fopenmp ../lib/libapbs.so.1 /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c: In function 'initAPOL': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 4590 | atomData = Vparam_getAtomData(param, "WAT", "OW"); | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: note: referencing argument 2 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 3 [-Wstringop-overflow=] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4590:20: note: referencing argument 3 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.h:304:27: note: in a call to function 'Vparam_getAtomData' 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 4591 | if (atomData == VNULL) atomData = Vparam_getAtomData(param, "WAT", "O"); | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: note: referencing argument 2 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 2 [-Wstringop-overflow=] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/routines.c:4591:43: note: referencing argument 3 of type 'char *' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vparam.h:304:27: note: in a call to function 'Vparam_getAtomData' 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 60%] Built target apbs-bin /usr/bin/gmake -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend.internal". Scanning dependencies of target uhbd_asc2bin gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 61%] Building C object tools/mesh/CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:3: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_grid' [-Wunused-variable] 79 | int dz_##mat = dz | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:24:5: note: in expansion of macro 'MAT3' 24 | MAT3(grid, MXGRD, MXGRD, MXGRD); | ^~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:3: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:3: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:3: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:3: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:30:5: warning: ignoring return value of 'scanf' declared with attribute 'warn_unused_result' [-Wunused-result] 30 | scanf("%s", flnm); | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:42:5: warning: ignoring return value of 'scanf' declared with attribute 'warn_unused_result' [-Wunused-result] 42 | scanf("%s", newfile); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:54:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 54 | fscanf(inFile, "%s", title); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:57:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 57 | fscanf(inFile, "%lf", &scale); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:60:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 60 | fscanf(inFile, "%lf", &dum2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:63:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 63 | fscanf(inFile, "%d", &grdflg); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:66:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 66 | fscanf(inFile, "%d", &idum2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:69:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 69 | fscanf(inFile, "%d", &km); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:72:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 72 | fscanf(inFile, "%d", &one); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:75:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 75 | fscanf(inFile, "%d", &km); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:78:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 78 | fscanf(inFile, "%d", &im); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:81:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 81 | fscanf(inFile, "%d", &jm); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:84:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 84 | fscanf(inFile, "%d", &km); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:87:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 87 | fscanf(inFile, "%lf", &h); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:90:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 90 | fscanf(inFile, "%lf", &ox); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:93:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 93 | fscanf(inFile, "%lf", &oy); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:96:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 96 | fscanf(inFile, "%lf", &oz); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:99:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | fscanf(inFile, "%lf", &dum3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:102:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 102 | fscanf(inFile, "%lf", &dum4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:105:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | fscanf(inFile, "%lf", &dum5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:108:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 108 | fscanf(inFile, "%lf", &dum6); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:111:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 111 | fscanf(inFile, "%lf", &dum7); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:114:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 114 | fscanf(inFile, "%lf", &dum8); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:117:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 117 | fscanf(inFile, "%d", &idum3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:120:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 120 | fscanf(inFile, "%d", &idum4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:125:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 125 | fscanf(inFile, "%d", &kk); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:128:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 128 | fscanf(inFile, "%d", &im); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:131:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 131 | fscanf(inFile, "%d", &jm); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/uhbd_asc2bin.c:138:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 138 | fscanf(inFile, "%lf", RAT3(grid, i, j, k)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Linking C executable ../bin/uhbd_asc2bin cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/uhbd_asc2bin.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -o ../bin/uhbd_asc2bin ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 62%] Built target uhbd_asc2bin /usr/bin/gmake -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/depend.internal". Scanning dependencies of target tensor2dx gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 63%] Building C object tools/mesh/CMakeFiles/tensor2dx.dir/tensor2dx.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/tensor2dx.dir/tensor2dx.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:42:19: warning: unused variable 'index' [-Wunused-variable] 42 | int i,j,k,index,icol; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:42:17: warning: unused variable 'k' [-Wunused-variable] 42 | int i,j,k,index,icol; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:42:15: warning: unused variable 'j' [-Wunused-variable] 42 | int i,j,k,index,icol; | ^ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:14: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:14: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:14: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:14: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:97:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(pfile1,"%lf %lf %lf",&origin_xyz[0],&origin_xyz[1],&origin_xyz[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:98:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 98 | fscanf(pfile1,"%lf %lf %lf",&gspace[0],&gspace[1],&gspace[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:137:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 137 | fscanf(pfile2,"%i %i %i",&itmp[0],&itmp[1],&itmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:138:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 138 | fscanf(pfile2,"%lf %lf %lf",&datapt[0],&tmp[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:139:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 139 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&datapt[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:140:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 140 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&tmp[1],&datapt[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:155:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 155 | fscanf(pfile2,"%i %i %i",&itmp[0],&itmp[1],&itmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:156:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 156 | fscanf(pfile2,"%lf %lf %lf",&datapt[0],&tmp[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:157:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&datapt[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/tensor2dx.c:158:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 158 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&tmp[1],&datapt[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 64%] Linking C executable ../bin/tensor2dx cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/tensor2dx.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/tensor2dx.dir/tensor2dx.c.o -o ../bin/tensor2dx ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 64%] Built target tensor2dx /usr/bin/gmake -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/depend.internal". Scanning dependencies of target mgmesh gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 65%] Building C object tools/mesh/CMakeFiles/mgmesh.dir/mgmesh.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/mgmesh.dir/mgmesh.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mgmesh.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mgmesh.c:10: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mgmesh.c:10: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mgmesh.c:10: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mgmesh.c:10: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 67%] Linking C executable ../bin/mgmesh cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mgmesh.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/mgmesh.dir/mgmesh.c.o -o ../bin/mgmesh ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 67%] Built target mgmesh /usr/bin/gmake -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/depend.internal". Scanning dependencies of target mergedx gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 68%] Building C object tools/mesh/CMakeFiles/mergedx.dir/mergedx.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/mergedx.dir/mergedx.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c:81:13: warning: 'nx' may be used uninitialized in this function [-Wmaybe-uninitialized] 81 | mgrid = Vgrid_ctor(nx, ny, nz, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, VNULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c:81:13: warning: 'nz' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx.c:81:13: warning: 'ny' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 69%] Linking C executable ../bin/mergedx cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/mergedx.dir/mergedx.c.o -o ../bin/mergedx ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 69%] Built target mergedx /usr/bin/gmake -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/depend.internal". Scanning dependencies of target del2dx gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 70%] Building C object tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/del2dx.dir/del2dx.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:45:64: warning: variable 'extent' set but not used [-Wunused-but-set-variable] 45 | float val, xmax, scale, oldmid[3], temp, xdata, range, extent, origin[3], delta[3]; | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:45:50: warning: unused variable 'xdata' [-Wunused-variable] 45 | float val, xmax, scale, oldmid[3], temp, xdata, range, extent, origin[3], delta[3]; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:45:15: warning: unused variable 'val' [-Wunused-variable] 45 | float val, xmax, scale, oldmid[3], temp, xdata, range, extent, origin[3], delta[3]; | ^~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:16: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:16: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:16: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:16: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:76:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 76 | fread(&igrid, 1, sizeof(int), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:89:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 89 | fread(buffer, 1, sizeof(char) * 10, pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:97:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fread(data, tot_grid, sizeof(float), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:103:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fread(&scale, 1, sizeof(float), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/del2dx.c:106:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 106 | fread(oldmid, 3, sizeof(float), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Linking C executable ../bin/del2dx cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/del2dx.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/del2dx.dir/del2dx.c.o -o ../bin/del2dx ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 71%] Built target del2dx /usr/bin/gmake -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/depend.internal". Scanning dependencies of target smooth gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 72%] Building C object tools/mesh/CMakeFiles/smooth.dir/smooth.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/smooth.dir/smooth.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/smooth.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/smooth.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/smooth.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/smooth.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/smooth.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python && /usr/bin/cmake -E copy /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python/apbslib.py /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/../pdb2pqr/pdb2pka cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/python && /usr/bin/cmake -E copy /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/lib/_apbslib.so /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/../pdb2pqr/pdb2pka gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 72%] Built target _apbslib /usr/bin/gmake -f tools/mesh/CMakeFiles/dxmath.dir/build.make tools/mesh/CMakeFiles/dxmath.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/depend.internal". Scanning dependencies of target dxmath gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/dxmath.dir/build.make tools/mesh/CMakeFiles/dxmath.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/smooth.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/smooth.c:169:15: warning: 'format' may be used uninitialized in this function [-Wmaybe-uninitialized] 169 | } else if (format == VDF_DXBIN) { | ^ [ 74%] Building C object tools/mesh/CMakeFiles/dxmath.dir/dxmath.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/dxmath.dir/dxmath.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dxmath.c [ 75%] Linking C executable ../bin/smooth cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/smooth.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/smooth.dir/smooth.c.o -o ../bin/smooth ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dxmath.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dxmath.c:41:10: warning: unused variable 'format' [-Wunused-variable] 41 | char format[VMAX_BUFSIZE]; | ^~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dxmath.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dxmath.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dxmath.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dxmath.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dxmath.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 76%] Linking C executable ../bin/dxmath cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dxmath.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/dxmath.dir/dxmath.c.o -o ../bin/dxmath ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 76%] Built target smooth /usr/bin/gmake -f tools/mesh/CMakeFiles/mergedx2.dir/build.make tools/mesh/CMakeFiles/mergedx2.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/DependInfo.cmake --color= Dependee 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Scanning dependencies of target mergedx2 gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/mergedx2.dir/build.make tools/mesh/CMakeFiles/mergedx2.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 77%] Building C object tools/mesh/CMakeFiles/mergedx2.dir/mergedx2.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/mergedx2.dir/mergedx2.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx2.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx2.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx2.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx2.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/mergedx2.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 77%] Built target dxmath /usr/bin/gmake -f tools/mesh/CMakeFiles/benchmark.dir/build.make tools/mesh/CMakeFiles/benchmark.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/depend.internal". Scanning dependencies of target benchmark gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/benchmark.dir/build.make tools/mesh/CMakeFiles/benchmark.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 78%] Building C object tools/mesh/CMakeFiles/benchmark.dir/benchmark.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/benchmark.dir/benchmark.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:28:12: warning: unused variable 'grid' [-Wunused-variable] 28 | Vgrid *grid; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:58: warning: unused variable 'sum' [-Wunused-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:51: warning: unused variable 'value' [-Wunused-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:44: warning: unused variable 'pt' [-Wunused-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:38: warning: variable 'zmin' set but not used [-Wunused-but-set-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:32: warning: variable 'ymin' set but not used [-Wunused-but-set-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:26: warning: variable 'xmin' set but not used [-Wunused-but-set-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:20: warning: variable 'hzed' set but not used [-Wunused-but-set-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:16: warning: variable 'hx' set but not used [-Wunused-but-set-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:18:12: warning: variable 'hy' set but not used [-Wunused-but-set-variable] 18 | double hy, hx, hzed, xmin, ymin, zmin, pt[3], value, sum, dtmp; | ^~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:17:27: warning: unused variable 'k' [-Wunused-variable] 17 | int nx, ny, nz, i, j, k, itmp; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:17:24: warning: unused variable 'j' [-Wunused-variable] 17 | int nx, ny, nz, i, j, k, itmp; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:17:21: warning: unused variable 'i' [-Wunused-variable] 17 | int nx, ny, nz, i, j, k, itmp; | ^ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/benchmark.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 80%] Linking C executable ../bin/benchmark cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmark.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/benchmark.dir/benchmark.c.o -o ../bin/benchmark ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp [ 81%] Linking C executable ../bin/mergedx2 cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx2.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/mergedx2.dir/mergedx2.c.o -o ../bin/mergedx2 ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 81%] Built target benchmark /usr/bin/gmake -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/depend.internal". Scanning dependencies of target dx2mol gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 82%] Building C object tools/mesh/CMakeFiles/dx2mol.dir/dx2mol.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/dx2mol.dir/dx2mol.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2mol.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2mol.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2mol.c:28:12: warning: unused variable 'avg' [-Wunused-variable] 28 | double avg; | ^~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2mol.c:19: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2mol.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2mol.c:19: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2mol.c:19: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2mol.c:19: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 83%] Linking C executable ../bin/dx2mol cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2mol.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/dx2mol.dir/dx2mol.c.o -o ../bin/dx2mol ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 83%] Built target mergedx2 gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/value.dir/DependInfo.cmake --color= [ 83%] Built target dx2mol /usr/bin/gmake -f tools/mesh/CMakeFiles/multivalue.dir/build.make tools/mesh/CMakeFiles/multivalue.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/value.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/value.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/value.dir/depend.internal". Scanning dependencies of target value Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/depend.internal". gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' Scanning dependencies of target multivalue gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/multivalue.dir/build.make tools/mesh/CMakeFiles/multivalue.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 84%] Building C object tools/mesh/CMakeFiles/value.dir/value.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/value.dir/value.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/value.c [ 85%] Building C object tools/mesh/CMakeFiles/multivalue.dir/multivalue.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/multivalue.dir/multivalue.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/multivalue.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/value.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/value.c:37:9: warning: unused variable 'inorm' [-Wunused-variable] 37 | int inorm; | ^~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/value.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/value.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/value.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/value.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/value.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/multivalue.c:46: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/multivalue.c:46: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/multivalue.c:46: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/multivalue.c:46: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 87%] Linking C executable ../bin/value cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/value.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/value.dir/value.c.o -o ../bin/value ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp [ 88%] Linking C executable ../bin/multivalue cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/multivalue.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/multivalue.dir/multivalue.c.o -o ../bin/multivalue ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 88%] Built target value /usr/bin/gmake -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/depend.internal". Scanning dependencies of target similarity gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 89%] Building C object tools/mesh/CMakeFiles/similarity.dir/similarity.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/similarity.dir/similarity.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c [ 89%] Built target multivalue /usr/bin/gmake -f tools/mesh/CMakeFiles/analysis.dir/build.make tools/mesh/CMakeFiles/analysis.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/depend.internal". Scanning dependencies of target analysis gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/analysis.dir/build.make tools/mesh/CMakeFiles/analysis.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 90%] Building C object tools/mesh/CMakeFiles/analysis.dir/analysis.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/analysis.dir/analysis.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:13: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:14: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:14: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:14: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:14: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/maloc/maloc_base.h:82, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:14: In function 'strncpy', inlined from 'main' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:123:13: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1024 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'main' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:133:13: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1024 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:292:5: warning: 'minG2pt[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] 292 | Vnm_print(1, "Min gradient-squared value location = (%4.3f, %4.3f, %4.3f)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 | minG2pt[0], minG2pt[1], minG2pt[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:292:5: warning: 'minG2pt[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:292:5: warning: 'minG2pt[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:284:5: warning: 'minSpt[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] 284 | Vnm_print(1, "Min scalar value location = (%4.3f, %4.3f, %4.3f)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 | minSpt[0], minSpt[1], minSpt[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:284:5: warning: 'minSpt[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:284:5: warning: 'minSpt[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:288:5: warning: 'maxG2pt[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] 288 | Vnm_print(1, "Max gradient-squared value location = (%4.3f, %4.3f, %4.3f)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 | maxG2pt[0], maxG2pt[1], maxG2pt[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:280:5: warning: 'maxSpt[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] 280 | Vnm_print(1, "Max scalar value location = (%4.3f, %4.3f, %4.3f)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 | maxSpt[0], maxSpt[1], maxSpt[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:288:5: warning: 'maxG2pt[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] 288 | Vnm_print(1, "Max gradient-squared value location = (%4.3f, %4.3f, %4.3f)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 | maxG2pt[0], maxG2pt[1], maxG2pt[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:288:5: warning: 'maxG2pt[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:280:5: warning: 'maxSpt[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] 280 | Vnm_print(1, "Max scalar value location = (%4.3f, %4.3f, %4.3f)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 | maxSpt[0], maxSpt[1], maxSpt[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:280:5: warning: 'maxSpt[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:290:5: warning: 'minG2' may be used uninitialized in this function [-Wmaybe-uninitialized] 290 | Vnm_print(1, "Min gradient-squared value = %1.12E\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 | minG2); | ~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:286:5: warning: 'maxG2' may be used uninitialized in this function [-Wmaybe-uninitialized] 286 | Vnm_print(1, "Max gradient-squared value = %1.12E\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 | maxG2); | ~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:278:5: warning: 'maxS' may be used uninitialized in this function [-Wmaybe-uninitialized] 278 | Vnm_print(1, "Max scalar value = %1.12E\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 | maxS); | ~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/analysis.c:182:14: warning: 'format' may be used uninitialized in this function [-Wmaybe-uninitialized] 182 | if (!readGrid(&mask, maskPath, format)) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/maloc/maloc_base.h:82, from /usr/include/maloc/maloc.h:38, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:67, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:13: In function 'strncpy', inlined from 'main' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:298:13: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1024 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'main' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:305:13: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1024 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'main' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:312:13: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1024 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'main' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:322:13: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1024 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'main' at /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:329:13: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' specified bound 1024 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/similarity.c:452:14: warning: 'format' may be used uninitialized in this function [-Wmaybe-uninitialized] 452 | if (!readGrid(&mask2, mask2Path, format)) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Linking C executable ../bin/analysis cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysis.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/analysis.dir/analysis.c.o -o ../bin/analysis ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp [ 92%] Linking C executable ../bin/similarity cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/similarity.dir/similarity.c.o -o ../bin/similarity ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 92%] Built target analysis /usr/bin/gmake -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/depend.internal". Scanning dependencies of target dx2uhbd gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 94%] Building C object tools/mesh/CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:25:10: warning: unused variable 'avg' [-Wunused-variable] 25 | double avg; | ^~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:24:19: warning: unused variable 'k' [-Wunused-variable] 24 | size_t u, i, j, k, nx, ny, nz; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:24:16: warning: unused variable 'j' [-Wunused-variable] 24 | size_t u, i, j, k, nx, ny, nz; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:24:13: warning: unused variable 'i' [-Wunused-variable] 24 | size_t u, i, j, k, nx, ny, nz; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:24:10: warning: unused variable 'u' [-Wunused-variable] 24 | size_t u, i, j, k, nx, ny, nz; | ^ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:17: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:17: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:17: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/mesh/dx2uhbd.c:17: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 95%] Linking C executable ../bin/dx2uhbd cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2uhbd.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -o ../bin/dx2uhbd ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 95%] Built target similarity /usr/bin/gmake -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/born.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/born.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/born.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/born.dir/depend.internal". Scanning dependencies of target born gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 96%] Building C object tools/manip/CMakeFiles/born.dir/born.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/born.dir/born.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/born.c gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [ 96%] Built target dx2uhbd /usr/bin/gmake -f tools/manip/CMakeFiles/coulomb.dir/build.make tools/manip/CMakeFiles/coulomb.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/coulomb.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/coulomb.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/coulomb.dir/depend.internal". Dependee "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip/CMakeFiles/coulomb.dir/depend.internal". Scanning dependencies of target coulomb gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/manip/CMakeFiles/coulomb.dir/build.make tools/manip/CMakeFiles/coulomb.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/born.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/born.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/born.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/born.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 97%] Building C object tools/manip/CMakeFiles/coulomb.dir/coulomb.c.o cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip && /usr/bin/gcc -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/src -I/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -fPIE -fopenmp -o CMakeFiles/coulomb.dir/coulomb.c.o -c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c: In function 'main': /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c:20:12: warning: unused variable 'j' [-Wunused-variable] 20 | int i, j; | ^ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c:18:34: warning: unused variable 'disp' [-Wunused-variable] 18 | double *pos, energy, zmagic, disp[3], force[3]; | ^~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:77, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c: At top level: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function] 169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function] 171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:78, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function] 251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function] 260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function] 269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function] 278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function] 287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function] 296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function] 305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function] 314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function] 323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function] 332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function] 341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function] 350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function] 359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/nosh.h:79, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:70, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function] 199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function] 208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function] 217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function] 226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function] 235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock); | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/apbs.h:93, from /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/tools/manip/coulomb.c:8: /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function] 811 | VPRIVATE void bcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function] 834 | VPRIVATE void bcolcomp2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function] 863 | VPRIVATE void bcolcomp3( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function] 885 | VPRIVATE void bcolcomp4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function] 910 | VPRIVATE void pcolcomp( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function] 933 | VPRIVATE double bspline2( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function] 942 | VPRIVATE double dbspline2( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function] 951 | VPRIVATE double VFCHI4( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function] 961 | VPRIVATE double bspline4( | ^~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function] 970 | VPRIVATE double dbspline4( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function] 979 | VPRIVATE double d2bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function] 988 | VPRIVATE double d3bspline4( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function] 998 | VPRIVATE double Vpmg_polarizEnergy( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function] 1009 | VPRIVATE double Vpmg_qfEnergyPoint( | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function] 1020 | VPRIVATE double Vpmg_qfEnergyVolume( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function] 1031 | VPRIVATE void Vpmg_splineSelect( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function] 1047 | VPRIVATE void focusFillBound( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function] 1058 | VPRIVATE void bcfl1( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function] 1080 | VPRIVATE void bcfl2( | ^~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function] 1109 | VPRIVATE void multipolebc( | ^~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function] 1126 | VPRIVATE double bcfl1sp( | ^~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function] 1139 | VPRIVATE void bcCalc( | ^~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function] 1147 | VPRIVATE void fillcoCoef( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function] 1155 | VPRIVATE void fillcoCoefMap( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function] 1164 | VPRIVATE void fillcoCoefMol( | ^~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function] 1173 | VPRIVATE void fillcoCoefMolIon( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function] 1182 | VPRIVATE void fillcoCoefMolDiel( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function] 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function] 1208 | VPRIVATE void fillcoCoefMolDielSmooth( | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function] 1217 | VPRIVATE void fillcoCoefSpline( | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function] 1226 | VPRIVATE void fillcoCoefSpline3( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function] 1235 | VPRIVATE void fillcoCoefSpline4( | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function] 1244 | VPRIVATE Vrc_Codes fillcoCharge( | ^~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function] 1253 | VPRIVATE Vrc_Codes fillcoChargeMap( | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function] 1261 | VPRIVATE void fillcoChargeSpline1( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function] 1269 | VPRIVATE void fillcoChargeSpline2( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function] 1277 | VPRIVATE void fillcoPermanentMultipole( | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function] 1285 | VPRIVATE void fillcoInducedDipole( | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function] 1294 | VPRIVATE void fillcoNLInducedDipole( | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function] 1304 | VPRIVATE void extEnergy( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function] 1317 | VPRIVATE void qfForceSpline1( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function] 1327 | VPRIVATE void qfForceSpline2( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function] 1337 | VPRIVATE void qfForceSpline4( | ^~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function] 1351 | VPRIVATE void zlapSolve( | ^~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function] 1364 | VPRIVATE void markSphere( | ^~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function] 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function] 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag); | ^~~~~~~~~~~~~~~~~~~ [ 98%] Linking C executable ../bin/born cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/born.dir/link.txt --verbose=1 [100%] Linking C executable ../bin/coulomb cd /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/coulomb.dir/link.txt --verbose=1 /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/born.dir/born.c.o -o ../bin/born ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp /usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fcommon -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -lm -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/coulomb.dir/coulomb.c.o -o ../bin/coulomb ../../lib/libapbs.so.1 -lm -lstdc++ -lmaloc -fopenmp gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [100%] Built target coulomb gmake[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' [100%] Built target born gmake[1]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0/x86_64-redhat-linux-gnu/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.noEMPh + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 ++ dirname /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 + cd apbs-pdb2pqr-vAPBS-3.0.0 + DESTDIR=/builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 + /usr/bin/cmake --install x86_64-redhat-linux-gnu -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/coulomb -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/born -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/dx2uhbd -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/similarity -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/analysis -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/multivalue -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/value -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/dx2mol -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/mergedx2 -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/benchmark -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/dxmath -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/smooth -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/del2dx -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/mergedx -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/mgmesh -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/tensor2dx -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs/tools/bin/uhbd_asc2bin -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/libapbs.so.1 -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/libapbs.so -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/apbscfg.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/apbs.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/routines.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/nosh.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/mgparm.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/femparm.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/pbamparm.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/pbsamparm.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/pbeparm.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/bemparm.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/geoflowparm.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/apolparm.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vacc.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/valist.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vatom.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vpbe.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vcap.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vclist.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vstring.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vparam.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vgreen.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vmatrix.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vhal.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/generic/vunit.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/buildAd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/buildBd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/buildGd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/buildPd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/cgd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/gsd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/matvecd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/mgcsd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/mgdrvd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/mgsubd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/mikpckd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/mlinpckd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/mypdec.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/newtond.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/newdrvd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/powerd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/smoothd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/pmgc/mgfasd.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/mg/vgrid.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/mg/vmgrid.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/mg/vopot.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/mg/vpmg.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/apbs/mg/vpmgp.h -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mgmesh -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/smooth -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dxmath -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mergedx -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mergedx2 -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/value -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/multivalue -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/benchmark -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/similarity -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/analysis -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dx2mol -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dx2uhbd -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/del2dx -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/tensor2dx -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/uhbd_asc2bin -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/coulomb -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/born -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib/libiapbs.a -- Installing: /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/include/iapbs/apbs_driver.h + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/coulomb + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/coulomb /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-coulomb + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/coulomb + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/born + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/born /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-born + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/born + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mgmesh + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mgmesh /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mgmesh + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mgmesh + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dxmath + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dxmath /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dxmath + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dxmath + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mergedx2 + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mergedx2 /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mergedx2 + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mergedx2 + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mergedx + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mergedx /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mergedx + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/mergedx + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/value + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/value /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-value + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/value + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/uhbd_asc2bin + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/uhbd_asc2bin /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-uhbd_asc2bin + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/uhbd_asc2bin + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/smooth + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/smooth /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-smooth + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/smooth + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dx2mol + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dx2mol /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dx2mol + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dx2mol + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dx2uhbd + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dx2uhbd /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dx2uhbd + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/dx2uhbd + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/similarity + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/similarity /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-similarity + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/similarity + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/multivalue + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/multivalue /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-multivalue + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/multivalue + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/benchmark + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/benchmark /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-benchmark + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/benchmark + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/analysis + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/analysis /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-analysis + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/analysis + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/del2dx + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/del2dx /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-del2dx + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/del2dx + for bin in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/{coulomb,born,mgmesh,dxmath,mergedx2,mergedx,value,uhbd_asc2bin,smooth,dx2mol,dx2uhbd,similarity,multivalue,benchmark,analysis,del2dx,tensor2dx} ++ basename /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/tensor2dx + cp -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/tensor2dx /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-tensor2dx + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/tensor2dx + mkdir -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/python3.9/site-packages/apbs + install -pm 755 apbs/tools/manip/psize.py /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/python3.9/site-packages/apbs/ + pathfix.py -pn -i /usr/bin/python3 /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/python3.9/site-packages/apbs/psize.py /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/python3.9/site-packages/apbs/psize.py: updating + ln -s /usr/lib64/python3.9/site-packages/apbs/psize.py /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-psize.py + install -pm 755 x86_64-redhat-linux-gnu/lib/_apbslib.so /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/python3.9/site-packages/apbs/ + rm -rf /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/apbs ++ find /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 -type f '(' -name '*.a' ')' + for i in `find /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 -type f \( -name "*.a" \)` + rm -f /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib/libiapbs.a + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 3.0.0-6.fc34 --unique-debug-suffix -3.0.0-6.fc34.x86_64 --unique-debug-src-base apbs-3.0.0-6.fc34.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/apbs-pdb2pqr-vAPBS-3.0.0 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-analysis extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-analysis explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-benchmark explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-born extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-benchmark extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-born explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-coulomb explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-del2dx extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-del2dx extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-coulomb explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dx2uhbd explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dx2mol extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dx2mol extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dx2uhbd explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dxmath explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mergedx extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mergedx extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-dxmath explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mergedx2 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mgmesh extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mgmesh extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-mergedx2 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-multivalue explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-similarity extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-similarity extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-multivalue explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-smooth explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-tensor2dx extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-smooth extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-tensor2dx explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-value explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-uhbd_asc2bin extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-uhbd_asc2bin extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/bin/apbs-value explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/python3.9/site-packages/apbs/_apbslib.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/libapbs.so.1 extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/python3.9/site-packages/apbs/_apbslib.so extracting debug info from /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/libapbs.so.1 original debug info size: 4756kB, size after compression: 4300kB /usr/lib/rpm/sepdebugcrcfix: Updated 20 CRC32s, 0 CRC32s did match. 5153 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib/debug/usr/lib64/python3.9 using /usr/bin/python3.9 Bytecompiling .py files below /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/lib64/python3.9 using /usr/bin/python3.9 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Processing files: apbs-3.0.0-6.fc34.x86_64 Provides: apbs = 3.0.0-6.fc34 apbs(x86-64) = 3.0.0-6.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libapbs.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libmaloc.so.1()(64bit) rtld(GNU_HASH) Processing files: apbs-tools-3.0.0-6.fc34.x86_64 warning: absolute symlink: /usr/bin/apbs-psize.py -> /usr/lib64/python3.9/site-packages/apbs/psize.py Provides: apbs-tools = 3.0.0-6.fc34 apbs-tools(x86-64) = 3.0.0-6.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libapbs.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmaloc.so.1()(64bit) libpthread.so.0()(64bit) rtld(GNU_HASH) Processing files: apbs-libs-3.0.0-6.fc34.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.mQuuNX + umask 022 + cd /builddir/build/BUILD + cd apbs-pdb2pqr-vAPBS-3.0.0 + DOCDIR=/builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/doc/apbs-libs + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/doc/apbs-libs + cp -pr apbs/README.md /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/doc/apbs-libs + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.xc07yy + umask 022 + cd /builddir/build/BUILD + cd apbs-pdb2pqr-vAPBS-3.0.0 + LICENSEDIR=/builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-libs + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-libs + cp -pr apbs/LICENSE.md /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-libs + cp -pr apbs/COPYING /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-libs + cp -pr apbs/contrib/iapbs/iapbs-COPYING /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-libs + cp -pr apbs/contrib/iapbs/iapbs-LGPLv2 /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-libs + RPM_EC=0 ++ jobs -p + exit 0 Provides: apbs-libs = 3.0.0-6.fc34 apbs-libs(x86-64) = 3.0.0-6.fc34 libapbs.so.1()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmaloc.so.1()(64bit) libpython3.9.so.1.0()(64bit) python(abi) = 3.9 rtld(GNU_HASH) Processing files: apbs-devel-3.0.0-6.fc34.x86_64 Provides: apbs-devel = 3.0.0-6.fc34 apbs-devel(x86-64) = 3.0.0-6.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libapbs.so.1()(64bit) Processing files: apbs-doc-3.0.0-6.fc34.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.dlNCXQ + umask 022 + cd /builddir/build/BUILD + cd apbs-pdb2pqr-vAPBS-3.0.0 + DOCDIR=/builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/doc/apbs-doc + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/doc/apbs-doc + cp -pr doc/_build/html /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/doc/apbs-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.vhWFSt + umask 022 + cd /builddir/build/BUILD + cd apbs-pdb2pqr-vAPBS-3.0.0 + LICENSEDIR=/builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-doc + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-doc + cp -pr doc/apbs/license.rst /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64/usr/share/licenses/apbs-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: apbs-doc = 3.0.0-6.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: apbs-debugsource-3.0.0-6.fc34.x86_64 Provides: apbs-debugsource = 3.0.0-6.fc34 apbs-debugsource(x86-64) = 3.0.0-6.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: apbs-debuginfo-3.0.0-6.fc34.x86_64 Provides: apbs-debuginfo = 3.0.0-6.fc34 apbs-debuginfo(x86-64) = 3.0.0-6.fc34 debuginfo(build-id) = 3940b8e694e943db7ffb5195b65dd7f0051755e1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: apbs-debugsource(x86-64) = 3.0.0-6.fc34 Processing files: apbs-tools-debuginfo-3.0.0-6.fc34.x86_64 Provides: apbs-tools-debuginfo = 3.0.0-6.fc34 apbs-tools-debuginfo(x86-64) = 3.0.0-6.fc34 debuginfo(build-id) = 059e219f66753e88c59232193dbe3ad23c9493ae debuginfo(build-id) = 094512a4cec64a7269806091b9bf023462c93067 debuginfo(build-id) = 2b39d0bb639fab13ddd627ba824151978b273189 debuginfo(build-id) = 386c6607f004a194b9decdf04f1bdce0c34904e7 debuginfo(build-id) = 4398021a1aa6f48899ac948bedb005060b703862 debuginfo(build-id) = 5b8c02fea68237a0406cec0ae978edc1cf6007fe debuginfo(build-id) = 5d7c6b7b5ba00be3685261ed37a75ff3aec94b2e debuginfo(build-id) = 60509be1fdb520edba0d4a62ca2fc4bd019a6e95 debuginfo(build-id) = 72fc09103ad49f243c9f07d95c6addb2fd2246a2 debuginfo(build-id) = 7f0f2b5c2f06d078253f10ce52dbec988d92855d debuginfo(build-id) = 84a9bafbeed862ef3caf906f63a45471e19c67c1 debuginfo(build-id) = 8cf387065b4d1fff8648ac9a4431a5f055a0b4d5 debuginfo(build-id) = 93a0d5feac25884552a24884e0f6a76d75007847 debuginfo(build-id) = 97e19d1304a7385dbe46843b7376c4400ae63d45 debuginfo(build-id) = d188b2dc464fd87158fd2b189ad36bf25b4e8177 debuginfo(build-id) = e4f043d708c59de84ad4ba26dd193f3c130ca6d2 debuginfo(build-id) = f5716586554d49dcde9ed7cc82b1d0b39fb7e493 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: apbs-debugsource(x86-64) = 3.0.0-6.fc34 Processing files: apbs-libs-debuginfo-3.0.0-6.fc34.x86_64 Provides: apbs-libs-debuginfo = 3.0.0-6.fc34 apbs-libs-debuginfo(x86-64) = 3.0.0-6.fc34 debuginfo(build-id) = 3746c48848d00aa28f4f1f283e6a82550c74f646 debuginfo(build-id) = cd2ecf006e748f55804d301a04cfa9c18c18d74f Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: apbs-debugsource(x86-64) = 3.0.0-6.fc34 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 Wrote: /builddir/build/RPMS/apbs-libs-debuginfo-3.0.0-6.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/apbs-debugsource-3.0.0-6.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/apbs-doc-3.0.0-6.fc34.noarch.rpm Wrote: /builddir/build/RPMS/apbs-libs-3.0.0-6.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/apbs-devel-3.0.0-6.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/apbs-tools-debuginfo-3.0.0-6.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/apbs-debuginfo-3.0.0-6.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/apbs-tools-3.0.0-6.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/apbs-3.0.0-6.fc34.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.5S1Eb6 + umask 022 + cd /builddir/build/BUILD + cd apbs-pdb2pqr-vAPBS-3.0.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/apbs-3.0.0-6.fc34.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild apbs-3.0.0-6.fc34.src.rpm Finish: build phase for apbs-3.0.0-6.fc34.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1611922180.450503/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1611922180.450503/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1611922180.450503/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/apbs-3.0.0-6.fc34.src.rpm) Config(child) 2 minutes 52 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run INFO: unmounting tmpfs.