Mock Version: 2.9 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-pyphi.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1611945155.958005/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.1jcqpu74:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.1jcqpu74:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '1a3d9e64333d432e8d2831a9da662f9e', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1611945155.958005/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.1jcqpu74:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-pyphi.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1596240000 Wrote: /builddir/build/SRPMS/python-pyphi-1.2.0-8.fc34.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-pyphi.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1611945155.958005/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.1jcqpu74:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.1jcqpu74:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '429b67348dee4b7b9a41fc1601811a34', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1611945155.958005/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.1jcqpu74:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-pyphi.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1596240000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.AN2OIC + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf pyphi-1.2.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/pyphi-1.2.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd pyphi-1.2.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i s/sphinxcontrib.napoleon/sphinx.ext.napoleon/ docs/conf.py + find pyphi -name '*.py' -exec sed -i '/#!\/usr\/bin\/env python3/ d' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.iNSgQq + umask 022 + cd /builddir/build/BUILD + cd pyphi-1.2.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_py creating build creating build/lib creating build/lib/pyphi copying pyphi/__about__.py -> build/lib/pyphi copying pyphi/__init__.py -> build/lib/pyphi copying pyphi/actual.py -> build/lib/pyphi copying pyphi/cache.py -> build/lib/pyphi copying pyphi/conf.py -> build/lib/pyphi copying pyphi/connectivity.py -> build/lib/pyphi copying pyphi/constants.py -> build/lib/pyphi copying pyphi/convert.py -> build/lib/pyphi copying pyphi/db.py -> build/lib/pyphi copying pyphi/direction.py -> build/lib/pyphi copying pyphi/distance.py -> build/lib/pyphi copying pyphi/distribution.py -> build/lib/pyphi copying pyphi/examples.py -> build/lib/pyphi copying pyphi/exceptions.py -> build/lib/pyphi copying pyphi/jsonify.py -> build/lib/pyphi copying pyphi/labels.py -> build/lib/pyphi copying pyphi/log.py -> build/lib/pyphi copying pyphi/macro.py -> build/lib/pyphi copying pyphi/memory.py -> build/lib/pyphi copying pyphi/network.py -> build/lib/pyphi copying pyphi/node.py -> build/lib/pyphi copying pyphi/partition.py -> build/lib/pyphi copying pyphi/registry.py -> build/lib/pyphi copying pyphi/subsystem.py -> build/lib/pyphi copying pyphi/timescale.py -> build/lib/pyphi copying pyphi/tpm.py -> build/lib/pyphi copying pyphi/utils.py -> build/lib/pyphi copying pyphi/validate.py -> build/lib/pyphi creating build/lib/pyphi/models copying pyphi/models/__init__.py -> build/lib/pyphi/models copying pyphi/models/actual_causation.py -> build/lib/pyphi/models copying pyphi/models/cmp.py -> build/lib/pyphi/models copying pyphi/models/cuts.py -> build/lib/pyphi/models copying pyphi/models/fmt.py -> build/lib/pyphi/models copying pyphi/models/mechanism.py -> build/lib/pyphi/models copying pyphi/models/subsystem.py -> build/lib/pyphi/models creating build/lib/pyphi/compute copying pyphi/compute/__init__.py -> build/lib/pyphi/compute copying pyphi/compute/distance.py -> build/lib/pyphi/compute copying pyphi/compute/network.py -> build/lib/pyphi/compute copying pyphi/compute/parallel.py -> build/lib/pyphi/compute copying pyphi/compute/subsystem.py -> build/lib/pyphi/compute running egg_info creating pyphi.egg-info writing pyphi.egg-info/PKG-INFO writing dependency_links to pyphi.egg-info/dependency_links.txt writing requirements to pyphi.egg-info/requires.txt writing top-level names to pyphi.egg-info/top_level.txt writing manifest file 'pyphi.egg-info/SOURCES.txt' reading manifest file 'pyphi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyphi.egg-info/SOURCES.txt' creating build/lib/pyphi/data creating build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/0.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/1.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/2.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/3.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/4.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/5.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/6.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/7.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/8.npy -> build/lib/pyphi/data/hamming_matrices copying pyphi/data/hamming_matrices/9.npy -> build/lib/pyphi/data/hamming_matrices creating build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/0.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/1.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/2.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/3.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/4.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/5.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/6.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/7.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/8.npy -> build/lib/pyphi/data/partition_lists copying pyphi/data/partition_lists/9.npy -> build/lib/pyphi/data/partition_lists + make -C docs SPHINXBUILD=sphinx-build-3 html make: Entering directory '/builddir/build/BUILD/pyphi-1.2.0/docs' sphinx-build-3 -b html -d _build/doctrees . _build/html Running Sphinx v3.4.3 Welcome to PyPhi! If you use PyPhi in your research, please cite the paper: Mayner WGP, Marshall W, Albantakis L, Findlay G, Marchman R, Tononi G. (2018). PyPhi: A toolbox for integrated information theory. PLOS Computational Biology 14(7): e1006343. https://doi.org/10.1371/journal.pcbi.1006343 Documentation is available online (or with the built-in `help()` function): https://pyphi.readthedocs.io To report issues, please use the issue tracker on the GitHub repository: https://github.com/wmayner/pyphi For general discussion, you are welcome to join the pyphi-users group: https://groups.google.com/forum/#!forum/pyphi-users To suppress this message, either: - Set `WELCOME_OFF: true` in your `pyphi_config.yml` file, or - Set the environment variable PYPHI_WELCOME_OFF to any value in your shell: export PYPHI_WELCOME_OFF='yes' making output directory... done building [mo]: targets for 0 po files that are out of date building [html]: targets for 45 source files that are out of date updating environment: [new config] 45 added, 0 changed, 0 removed reading sources... [ 2%] api/actual reading sources... [ 4%] api/cache reading sources... [ 6%] api/compute reading sources... [ 8%] api/compute.distance reading sources... [ 11%] api/compute.network reading sources... [ 13%] api/compute.parallel reading sources... [ 15%] api/compute.subsystem reading sources... [ 17%] api/conf reading sources... [ 20%] api/connectivity reading sources... [ 22%] api/constants reading sources... [ 24%] api/convert reading sources... [ 26%] api/direction reading sources... [ 28%] api/distance reading sources... [ 31%] api/distribution reading sources... [ 33%] api/examples reading sources... [ 35%] api/exceptions reading sources... [ 37%] api/jsonify reading sources... [ 40%] api/macro reading sources... [ 42%] api/models reading sources... [ 44%] api/models.actual_causation reading sources... [ 46%] api/models.cuts reading sources... [ 48%] api/models.mechanism reading sources... [ 51%] api/models.subsystem reading sources... [ 53%] api/network reading sources... [ 55%] api/node reading sources... [ 57%] api/partition reading sources... [ 60%] api/subsystem reading sources... [ 62%] api/timescale reading sources... [ 64%] api/tpm reading sources... [ 66%] api/utils reading sources... [ 68%] api/validate reading sources... [ 71%] caching reading sources... [ 73%] configuration reading sources... [ 75%] conventions reading sources... [ 77%] examples/2014paper reading sources... [ 80%] examples/actual_causation reading sources... [ 82%] examples/conditional_independence reading sources... [ 84%] examples/emergence reading sources... [ 86%] examples/index reading sources... [ 88%] examples/magic_cut reading sources... [ 91%] examples/residue reading sources... [ 93%] examples/xor reading sources... [ 95%] index reading sources... [ 97%] installation reading sources... [100%] macos_installation /builddir/build/BUILD/pyphi-1.2.0/pyphi/actual.py:docstring of pyphi.actual.Transition:67: WARNING: duplicate object description of pyphi.actual.Transition.cause_system, other instance in api/actual, use :noindex: for one of them /builddir/build/BUILD/pyphi-1.2.0/pyphi/macro.py:docstring of pyphi.macro.MacroNetwork.emergence:1: WARNING: duplicate object description of pyphi.macro.MacroNetwork.emergence, other instance in api/macro, use :noindex: for one of them /builddir/build/BUILD/pyphi-1.2.0/pyphi/models/cuts.py:docstring of pyphi.models.cuts.Cut.from_nodes:1: WARNING: duplicate object description of pyphi.models.cuts.Cut.from_nodes, other instance in api/models.cuts, use :noindex: for one of them /builddir/build/BUILD/pyphi-1.2.0/pyphi/models/cuts.py:docstring of pyphi.models.cuts.Cut.to_nodes:1: WARNING: duplicate object description of pyphi.models.cuts.Cut.to_nodes, other instance in api/models.cuts, use :noindex: for one of them looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 2%] api/actual writing output... [ 4%] api/cache writing output... [ 6%] api/compute writing output... [ 8%] api/compute.distance writing output... [ 11%] api/compute.network writing output... [ 13%] api/compute.parallel writing output... [ 15%] api/compute.subsystem writing output... [ 17%] api/conf writing output... [ 20%] api/connectivity writing output... [ 22%] api/constants writing output... [ 24%] api/convert writing output... [ 26%] api/direction writing output... [ 28%] api/distance writing output... [ 31%] api/distribution writing output... [ 33%] api/examples writing output... [ 35%] api/exceptions writing output... [ 37%] api/jsonify writing output... [ 40%] api/macro writing output... [ 42%] api/models writing output... [ 44%] api/models.actual_causation writing output... [ 46%] api/models.cuts writing output... [ 48%] api/models.mechanism writing output... [ 51%] api/models.subsystem writing output... [ 53%] api/network writing output... [ 55%] api/node writing output... [ 57%] api/partition writing output... [ 60%] api/subsystem writing output... [ 62%] api/timescale writing output... [ 64%] api/tpm writing output... [ 66%] api/utils writing output... [ 68%] api/validate writing output... [ 71%] caching writing output... [ 73%] configuration writing output... [ 75%] conventions writing output... [ 77%] examples/2014paper writing output... [ 80%] examples/actual_causation writing output... [ 82%] examples/conditional_independence writing output... [ 84%] examples/emergence writing output... [ 86%] examples/index writing output... [ 88%] examples/magic_cut writing output... [ 91%] examples/residue writing output... [ 93%] examples/xor writing output... [ 95%] index writing output... [ 97%] installation writing output... [100%] macos_installation generating indices... /builddir/build/BUILD/pyphi-1.2.0/pyphi/actual.py:docstring of pyphi.actual.true_events:: WARNING: more than one target found for cross-reference 'AcSystemIrreducibilityAnalysis': pyphi.models.AcSystemIrreducibilityAnalysis, pyphi.models.actual_causation.AcSystemIrreducibilityAnalysis /builddir/build/BUILD/pyphi-1.2.0/pyphi/actual.py:docstring of pyphi.actual.extrinsic_events:: WARNING: more than one target found for cross-reference 'AcSystemIrreducibilityAnalysis': pyphi.models.AcSystemIrreducibilityAnalysis, pyphi.models.actual_causation.AcSystemIrreducibilityAnalysis /builddir/build/BUILD/pyphi-1.2.0/pyphi/subsystem.py:docstring of pyphi.subsystem.Subsystem:: WARNING: more than one target found for cross-reference 'Cut': pyphi.models.Cut, pyphi.models.cuts.Cut genindex py-modindex done writing additional pages... search done copying images... [100%] _static/connectivity-matrix-example-network.png copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 7 warnings. The HTML pages are in _build/html. Build finished. The HTML pages are in _build/html. make: Leaving directory '/builddir/build/BUILD/pyphi-1.2.0/docs' + rm docs/_build/html/.doctrees docs/_build/html/.buildinfo -vf removed 'docs/_build/html/.buildinfo' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.WDyzVV + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64 ++ dirname /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64 + cd pyphi-1.2.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64 running install running install_lib creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9 creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/9.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/8.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/7.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/6.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/5.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/4.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/3.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/2.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/1.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists copying build/lib/pyphi/data/partition_lists/0.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/partition_lists creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/9.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/8.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/7.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/6.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/5.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/4.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/3.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/2.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/1.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices copying build/lib/pyphi/data/hamming_matrices/0.npy -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/data/hamming_matrices creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute copying build/lib/pyphi/compute/subsystem.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute copying build/lib/pyphi/compute/parallel.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute copying build/lib/pyphi/compute/network.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute copying build/lib/pyphi/compute/distance.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute copying build/lib/pyphi/compute/__init__.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute creating /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models copying build/lib/pyphi/models/subsystem.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models copying build/lib/pyphi/models/mechanism.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models copying build/lib/pyphi/models/fmt.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models copying build/lib/pyphi/models/cuts.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models copying build/lib/pyphi/models/cmp.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models copying build/lib/pyphi/models/actual_causation.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models copying build/lib/pyphi/models/__init__.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models copying build/lib/pyphi/validate.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/utils.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/tpm.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/timescale.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/subsystem.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/registry.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/partition.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/node.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/network.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/memory.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/macro.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/log.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/labels.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/jsonify.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/exceptions.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/examples.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/distribution.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/distance.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/direction.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/db.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/convert.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/constants.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/connectivity.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/conf.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/cache.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/actual.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/__init__.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi copying build/lib/pyphi/__about__.py -> /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute/subsystem.py to subsystem.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute/parallel.py to parallel.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute/network.py to network.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute/distance.py to distance.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/compute/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models/subsystem.py to subsystem.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models/mechanism.py to mechanism.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models/fmt.py to fmt.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models/cuts.py to cuts.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models/cmp.py to cmp.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models/actual_causation.py to actual_causation.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/models/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/validate.py to validate.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/utils.py to utils.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/tpm.py to tpm.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/timescale.py to timescale.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/subsystem.py to subsystem.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/registry.py to registry.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/partition.py to partition.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/node.py to node.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/network.py to network.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/memory.py to memory.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/macro.py to macro.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/log.py to log.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/labels.py to labels.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/jsonify.py to jsonify.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/exceptions.py to exceptions.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/examples.py to examples.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/distribution.py to distribution.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/distance.py to distance.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/direction.py to direction.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/db.py to db.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/convert.py to convert.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/constants.py to constants.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/connectivity.py to connectivity.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/conf.py to conf.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/cache.py to cache.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/actual.py to actual.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi/__about__.py to __about__.cpython-39.pyc writing byte-compilation script '/tmp/tmpwu3amhcv.py' /usr/bin/python3 /tmp/tmpwu3amhcv.py removing /tmp/tmpwu3amhcv.py running install_egg_info running egg_info writing pyphi.egg-info/PKG-INFO writing dependency_links to pyphi.egg-info/dependency_links.txt writing requirements to pyphi.egg-info/requires.txt writing top-level names to pyphi.egg-info/top_level.txt reading manifest file 'pyphi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyphi.egg-info/SOURCES.txt' Copying pyphi.egg-info to /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9/site-packages/pyphi-1.2.0-py3.9.egg-info running install_scripts + rm -rfv /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/bin/__pycache__ + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 1.2.0-8.fc34 --unique-debug-suffix -1.2.0-8.fc34.x86_64 --unique-debug-src-base python-pyphi-1.2.0-8.fc34.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/pyphi-1.2.0 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/lib/python3.9 using /usr/bin/python3.9 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.DvXB1b + umask 022 + cd /builddir/build/BUILD + cd pyphi-1.2.0 + py.test-3.9 ============================= test session starts ============================== platform linux -- Python 3.9.1, pytest-6.0.2, py-1.10.0, pluggy-0.13.1 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/pyphi-1.2.0, configfile: pytest.ini plugins: lazy-fixture-0.6.3 collecting ... collected 576 items docs/conventions.rst::conventions.rst PASSED [ 0%] docs/examples/2014paper.rst::2014paper.rst PASSED [ 0%] docs/examples/actual_causation.rst::actual_causation.rst PASSED [ 0%] docs/examples/conditional_independence.rst::conditional_independence.rst PASSED [ 0%] docs/examples/emergence.rst::emergence.rst PASSED [ 0%] docs/examples/index.rst::index.rst PASSED [ 1%] docs/examples/magic_cut.rst::magic_cut.rst PASSED [ 1%] docs/examples/residue.rst::residue.rst PASSED [ 1%] docs/examples/xor.rst::xor.rst PASSED [ 1%] pyphi/conf.py::pyphi.conf PASSED [ 1%] pyphi/conf.py::pyphi.conf.Config.override PASSED [ 1%] pyphi/convert.py::pyphi.convert.be2le_state_by_state PASSED [ 2%] pyphi/convert.py::pyphi.convert.be_index2state PASSED [ 2%] pyphi/convert.py::pyphi.convert.le_index2state PASSED [ 2%] pyphi/convert.py::pyphi.convert.reverse_bits PASSED [ 2%] pyphi/convert.py::pyphi.convert.state2be_index PASSED [ 2%] pyphi/convert.py::pyphi.convert.state2le_index PASSED [ 2%] pyphi/convert.py::pyphi.convert.state_by_node2state_by_state PASSED [ 3%] pyphi/convert.py::pyphi.convert.state_by_state2state_by_node PASSED [ 3%] pyphi/distance.py::pyphi.distance.MeasureRegistry SKIPPED [ 3%] pyphi/distance.py::pyphi.distance._hamming_matrix PASSED [ 3%] pyphi/distribution.py::pyphi.distribution.repertoire_shape PASSED [ 3%] pyphi/labels.py::pyphi.labels.NodeLabels PASSED [ 3%] pyphi/macro.py::pyphi.macro.Blackbox.reindex PASSED [ 4%] pyphi/macro.py::pyphi.macro.CoarseGrain.macro_state PASSED [ 4%] pyphi/macro.py::pyphi.macro.CoarseGrain.reindex PASSED [ 4%] pyphi/macro.py::pyphi.macro._partitions_list PASSED [ 4%] pyphi/partition.py::pyphi.partition.PartitionRegistry SKIPPED [ 4%] pyphi/partition.py::pyphi.partition.bipartition PASSED [ 5%] pyphi/partition.py::pyphi.partition.bipartition_indices PASSED [ 5%] pyphi/partition.py::pyphi.partition.directed_bipartition PASSED [ 5%] pyphi/partition.py::pyphi.partition.directed_bipartition_indices PASSED [ 5%] pyphi/partition.py::pyphi.partition.directed_bipartition_of_one PASSED [ 5%] pyphi/partition.py::pyphi.partition.directed_tripartition PASSED [ 5%] pyphi/partition.py::pyphi.partition.directed_tripartition_indices PASSED [ 6%] pyphi/partition.py::pyphi.partition.k_partitions PASSED [ 6%] pyphi/partition.py::pyphi.partition.mip_bipartitions PASSED [ 6%] pyphi/partition.py::pyphi.partition.partitions PASSED [ 6%] pyphi/utils.py::pyphi.utils.comb_indices PASSED [ 6%] pyphi/utils.py::pyphi.utils.powerset PASSED [ 6%] pyphi/models/cuts.py::pyphi.models.cuts.Cut.cut_matrix PASSED [ 7%] pyphi/models/fmt.py::pyphi.models.fmt.box PASSED [ 7%] pyphi/models/fmt.py::pyphi.models.fmt.indent PASSED [ 7%] pyphi/models/fmt.py::pyphi.models.fmt.margin PASSED [ 7%] pyphi/models/fmt.py::pyphi.models.fmt.side_by_side PASSED [ 7%] test/test_actual.py::test_background_conditions[background_all_off-EFFECT-mechanism0-purview0-1] PASSED [ 7%] test/test_actual.py::test_background_conditions[background_all_off-CAUSE-mechanism1-purview1-1] PASSED [ 8%] test/test_actual.py::test_background_conditions[background_all_on-EFFECT-mechanism2-purview2-0] PASSED [ 8%] test/test_actual.py::test_background_conditions[background_all_on-CAUSE-mechanism3-purview3-0] PASSED [ 8%] test/test_actual.py::test_background_noised PASSED [ 8%] test/test_actual.py::test_background_3_node[before_state0-purview0-0.0] PASSED [ 8%] test/test_actual.py::test_background_3_node[before_state1-purview1-1.0] PASSED [ 9%] test/test_actual.py::test_potential_purviews PASSED [ 9%] test/test_actual.py::test_transition_initialization PASSED [ 9%] test/test_actual.py::test_purview_state PASSED [ 9%] test/test_actual.py::test_mechanism_state PASSED [ 9%] test/test_actual.py::test_mechanism_indices PASSED [ 9%] test/test_actual.py::test_purview_indices PASSED [ 10%] test/test_actual.py::test_system_dict PASSED [ 10%] test/test_actual.py::test_transition_len PASSED [ 10%] test/test_actual.py::test_transition_bool PASSED [ 10%] test/test_actual.py::test_transition_equal PASSED [ 10%] test/test_actual.py::test_transition_apply_cut PASSED [ 10%] test/test_actual.py::test_to_json PASSED [ 11%] test/test_actual.py::test_acria_ordering PASSED [ 11%] test/test_actual.py::test_acria_hash PASSED [ 11%] test/test_actual.py::test_acria_phi_alias PASSED [ 11%] test/test_actual.py::test_causal_link_ordering PASSED [ 11%] test/test_actual.py::test_account_irreducible_causes_and_effects PASSED [ 11%] test/test_actual.py::test_account_repr_and_str PASSED [ 12%] test/test_actual.py::test_account_addition PASSED [ 12%] test/test_actual.py::test_ac_sia_repr_and_str PASSED [ 12%] test/test_actual.py::test_ac_sia_ordering PASSED [ 12%] test/test_actual.py::test_repertoires[CAUSE-mechanism0-purview0-repertoire0] PASSED [ 12%] test/test_actual.py::test_repertoires[CAUSE-mechanism1-purview1-repertoire1] PASSED [ 13%] test/test_actual.py::test_repertoires[CAUSE-mechanism2-purview2-repertoire2] PASSED [ 13%] test/test_actual.py::test_repertoires[EFFECT-mechanism3-purview3-repertoire3] PASSED [ 13%] test/test_actual.py::test_repertoires[EFFECT-mechanism4-purview4-repertoire4] PASSED [ 13%] test/test_actual.py::test_repertoires[EFFECT-mechanism5-purview5-repertoire5] PASSED [ 13%] test/test_actual.py::test_invalid_repertoires PASSED [ 13%] test/test_actual.py::test_unconstrained_repertoires PASSED [ 14%] test/test_actual.py::test_probability[CAUSE-mechanism0-purview0-0.66666667] PASSED [ 14%] test/test_actual.py::test_probability[CAUSE-mechanism1-purview1-0.66666667] PASSED [ 14%] test/test_actual.py::test_probability[CAUSE-mechanism2-purview2-0.3333333] PASSED [ 14%] test/test_actual.py::test_probability[EFFECT-mechanism3-purview3-1] PASSED [ 14%] test/test_actual.py::test_probability[EFFECT-mechanism4-purview4-1] PASSED [ 14%] test/test_actual.py::test_probability[EFFECT-mechanism5-purview5-1] PASSED [ 15%] test/test_actual.py::test_unconstrained_probability PASSED [ 15%] test/test_actual.py::test_cause_ratio[mechanism0-purview0-0.41504] PASSED [ 15%] test/test_actual.py::test_cause_ratio[mechanism1-purview1-0.41504] PASSED [ 15%] test/test_actual.py::test_cause_ratio[mechanism2-purview2-0.41504] PASSED [ 15%] test/test_actual.py::test_effect_ratio[mechanism0-purview0-0.41504] PASSED [ 15%] test/test_actual.py::test_effect_ratio[mechanism1-purview1-0.41504] PASSED [ 16%] test/test_actual.py::test_effect_ratio[mechanism2-purview2-0.41504] PASSED [ 16%] test/test_actual.py::test_ac_ex1_transition PASSED [ 16%] test/test_actual.py::test_actual_cut_indices PASSED [ 16%] test/test_actual.py::test_actual_apply_cut PASSED [ 16%] test/test_actual.py::test_actual_cut_matrix PASSED [ 17%] test/test_actual.py::test_get_actual_cuts[BIDIRECTIONAL-answer0] PASSED [ 17%] test/test_actual.py::test_get_actual_cuts[CAUSE-answer1] PASSED [ 17%] test/test_actual.py::test_get_actual_cuts[EFFECT-answer2] PASSED [ 17%] test/test_actual.py::test_sia PASSED [ 17%] test/test_actual.py::test_null_ac_sia PASSED [ 17%] test/test_actual.py::test_prevention PASSED [ 18%] test/test_actual.py::test_causal_nexus PASSED [ 18%] test/test_actual.py::test_true_events PASSED [ 18%] test/test_actual.py::test_true_ces PASSED [ 18%] test/test_actual.py::test_extrinsic_events PASSED [ 18%] test/test_big_phi.py::test_sia_cache_key_includes_config_dependencies PASSED [ 18%] test/test_big_phi.py::test_clear_subsystem_caches_after_computing_sia_config_option PASSED [ 19%] test/test_big_phi.py::test_conceptual_info PASSED [ 19%] test/test_big_phi.py::test_sia_empty_subsystem PASSED [ 19%] test/test_big_phi.py::test_sia_disconnected_network PASSED [ 19%] test/test_big_phi.py::test_sia_wrappers PASSED [ 19%] test/test_big_phi.py::test_sia_single_micro_node_selfloops_have_phi PASSED [ 19%] test/test_big_phi.py::test_sia_single_micro_node_selfloops_dont_have_phi PASSED [ 20%] test/test_big_phi.py::test_sia_single_micro_nodes_without_selfloops_dont_have_phi PASSED [ 20%] test/test_big_phi.py::test_find_sia_sequential_standard_example PASSED [ 20%] test/test_big_phi.py::test_find_sia_parallel_standard_example PASSED [ 20%] test/test_big_phi.py::test_find_sia_sequential_noised_example PASSED [ 20%] test/test_big_phi.py::test_find_sia_parallel_noised_example PASSED [ 21%] test/test_big_phi.py::test_find_sia_parallel_micro PASSED [ 21%] test/test_big_phi.py::test_find_sia_sequential_micro PASSED [ 21%] test/test_big_phi.py::test_possible_complexes PASSED [ 21%] test/test_big_phi.py::test_complexes_standard PASSED [ 21%] test/test_big_phi.py::test_all_complexes_standard PASSED [ 21%] test/test_big_phi.py::test_all_complexes_parallelization PASSED [ 22%] test/test_big_phi.py::test_sia_complete_graph_standard_example PASSED [ 22%] test/test_big_phi.py::test_sia_complete_graph_s_noised PASSED [ 22%] test/test_big_phi.py::test_sia_complete_graph_big_subsys_all SKIPPED [ 22%] test/test_big_phi.py::test_sia_complete_graph_rule152_s SKIPPED [ 22%] test/test_big_phi.py::test_sia_big_network SKIPPED [ 22%] test/test_big_phi.py::test_sia_big_network_0_thru_3 PASSED [ 23%] test/test_big_phi.py::test_sia_rule152 SKIPPED [ 23%] test/test_big_phi.py::test_rule152_complexes_no_caching SKIPPED [ 23%] test/test_big_phi.py::test_sia_macro PASSED [ 23%] test/test_big_phi.py::test_sia_bipartitions PASSED [ 23%] test/test_big_phi.py::test_system_cut_styles PASSED [ 23%] test/test_cache.py::test_cache PASSED [ 24%] test/test_cache.py::test_cache_decorator PASSED [ 24%] test/test_cache.py::test_cache_key_generation PASSED [ 24%] test/test_cache.py::test_cache_repertoires_config_option PASSED [ 24%] test/test_cache.py::test_redis_singleton_connection SKIPPED [ 24%] test/test_cache.py::test_redis_cache_info SKIPPED [ 25%] test/test_cache.py::test_use_redis_mice_cache SKIPPED [ 25%] test/test_cache.py::test_redis_cache_sharing_between_processes SKIPPED [ 25%] test/test_cache.py::test_use_dict_mice_cache PASSED [ 25%] test/test_cache.py::test_mice_cache_keys PASSED [ 25%] test/test_cache.py::test_mice_cache[True] SKIPPED [ 25%] test/test_cache.py::test_mice_cache[False] PASSED [ 26%] test/test_cache.py::test_do_not_cache_phi_zero_mice PASSED [ 26%] test/test_cache.py::test_only_cache_uncut_subsystem_mices[True] SKIPPED [ 26%] test/test_cache.py::test_only_cache_uncut_subsystem_mices[False] PASSED [ 26%] test/test_cache.py::test_split_mechanism_mice_is_not_reusable[True] SKIPPED [ 26%] test/test_cache.py::test_split_mechanism_mice_is_not_reusable[False] PASSED [ 26%] test/test_cache.py::test_cut_relevant_connections_mice_is_not_reusable[True] SKIPPED [ 27%] test/test_cache.py::test_cut_relevant_connections_mice_is_not_reusable[False] PASSED [ 27%] test/test_cache.py::test_inherited_mice_cache_keeps_unaffected_mice[True] SKIPPED [ 27%] test/test_cache.py::test_inherited_mice_cache_keeps_unaffected_mice[False] PASSED [ 27%] test/test_cache.py::test_inherited_cache_must_come_from_uncut_subsystem[True] SKIPPED [ 27%] test/test_cache.py::test_inherited_cache_must_come_from_uncut_subsystem[False] PASSED [ 27%] test/test_cache.py::test_mice_cache_respects_cache_memory_limits PASSED [ 28%] test/test_cache.py::test_purview_cache PASSED [ 28%] test/test_cache.py::test_only_cache_purviews_if_configured PASSED [ 28%] test/test_ces.py::test_ces_distance_uses_simple_vs_emd PASSED [ 28%] test/test_ces.py::test_ces_distance_switches_to_small_phi_difference PASSED [ 28%] test/test_ces.py::test_parallel_and_sequential_ces_are_equal PASSED [ 28%] test/test_ces.py::test_ces_concepts_share_the_same_subsystem[False] PASSED [ 29%] test/test_ces.py::test_ces_concepts_share_the_same_subsystem[True] PASSED [ 29%] test/test_concept_style_cuts.py::test_cut_indices PASSED [ 29%] test/test_concept_style_cuts.py::test_apply_cut PASSED [ 29%] test/test_concept_style_cuts.py::test_cut_matrix PASSED [ 29%] test/test_concept_style_cuts.py::test_splits_mechanism PASSED [ 30%] test/test_concept_style_cuts.py::test_all_cut_mechanisms PASSED [ 30%] test/test_concept_style_cuts.py::test_concept_style_cuts PASSED [ 30%] test/test_concept_style_cuts.py::test_kcut_equality PASSED [ 30%] test/test_concept_style_cuts.py::test_system_accessors PASSED [ 30%] test/test_concept_style_cuts.py::test_sia_concept_style_ordering PASSED [ 30%] test/test_concept_style_cuts.py::test_sia_concept_style PASSED [ 31%] test/test_concept_style_cuts.py::test_unpickle PASSED [ 31%] test/test_concept_style_cuts.py::test_concept_style_phi PASSED [ 31%] test/test_config.py::test_load_dict PASSED [ 31%] test/test_config.py::test_snapshot PASSED [ 31%] test/test_config.py::test_load_file PASSED [ 31%] test/test_config.py::test_str PASSED [ 32%] test/test_config.py::test_override PASSED [ 32%] test/test_config.py::test_override_cleans_up_after_exception PASSED [ 32%] test/test_config.py::test_override_is_a_context_manager PASSED [ 32%] test/test_config.py::test_option_descriptor PASSED [ 32%] test/test_config.py::test_defaults PASSED [ 32%] test/test_config.py::test_only_set_public__attributes_that_are_options PASSED [ 33%] test/test_config.py::test_can_set_private_attributes PASSED [ 33%] test/test_config.py::test_on_change PASSED [ 33%] test/test_config.py::test_reconfigure_logging_on_change PASSED [ 33%] test/test_config.py::test_reconfigure_precision_on_change PASSED [ 33%] test/test_config.py::test_reconfigure_joblib_on_change PASSED [ 34%] test/test_config.py::test_config_validation[SYSTEM_CUTS-valid0-invalid0] PASSED [ 34%] test/test_config.py::test_config_validation[REPR_VERBOSITY-valid1-invalid1] PASSED [ 34%] test/test_connectivity.py::test_get_inputs_from_cm PASSED [ 34%] test/test_connectivity.py::test_get_outputs_from_cm PASSED [ 34%] test/test_connectivity.py::test_causally_significant_nodes PASSED [ 34%] test/test_connectivity.py::test_relevant_connections PASSED [ 35%] test/test_connectivity.py::test_block_cm PASSED [ 35%] test/test_connectivity.py::test_block_reducible PASSED [ 35%] test/test_connectivity.py::test_is_strong PASSED [ 35%] test/test_connectivity.py::test_is_full PASSED [ 35%] test/test_connectivity.py::test_apply_boundary_conditions PASSED [ 35%] test/test_convert.py::test_le_index2state PASSED [ 36%] test/test_convert.py::test_be_index2state PASSED [ 36%] test/test_convert.py::test_to_multidimensional PASSED [ 36%] test/test_convert.py::test_to_2dimensional PASSED [ 36%] test/test_convert.py::test_state_by_state2state_by_node PASSED [ 36%] test/test_convert.py::test_state_by_node2state_by_state PASSED [ 36%] test/test_convert.py::test_nondet_state_by_node2state_by_state PASSED [ 37%] test/test_convert.py::test_nondet_state_by_state2state_by_node PASSED [ 37%] test/test_convert.py::test_2_d_state_by_node2state_by_state PASSED [ 37%] test/test_convert.py::test_n_d_state_by_node2state_by_state PASSED [ 37%] test/test_direction.py::test_direction_order PASSED [ 37%] test/test_direction.py::test_direction_json[CAUSE-json_dict0] PASSED [ 38%] test/test_direction.py::test_direction_json[EFFECT-json_dict1] PASSED [ 38%] test/test_direction.py::test_direction_json[BIDIRECTIONAL-json_dict2] PASSED [ 38%] test/test_direction.py::test_direction_str PASSED [ 38%] test/test_distance.py::test_hamming_matrix PASSED [ 38%] test/test_distance.py::test_large_hamming_matrix PASSED [ 38%] test/test_distance.py::test_emd_same_distributions PASSED [ 39%] test/test_distance.py::test_emd_validates_distribution_shapes PASSED [ 39%] test/test_distance.py::test_l1_distance PASSED [ 39%] test/test_distance.py::test_entropy_difference PASSED [ 39%] test/test_distance.py::test_kld PASSED [ 39%] test/test_distance.py::test_psq2 PASSED [ 39%] test/test_distance.py::test_mp2q PASSED [ 40%] test/test_distance.py::test_klm PASSED [ 40%] test/test_distance.py::test_default_measures PASSED [ 40%] test/test_distance.py::test_default_asymmetric_measures PASSED [ 40%] test/test_distance.py::test_system_repertoire_distance_must_be_symmetric PASSED [ 40%] test/test_distance.py::test_suppress_np_warnings PASSED [ 40%] test/test_distribution.py::test_normalize PASSED [ 41%] test/test_distribution.py::test_uniform_distribution PASSED [ 41%] test/test_distribution.py::test_purview_max_entropy_distribution PASSED [ 41%] test/test_distribution.py::test_marginal_zero PASSED [ 41%] test/test_distribution.py::test_marginal PASSED [ 41%] test/test_distribution.py::test_independent PASSED [ 42%] test/test_distribution.py::test_purview_size PASSED [ 42%] test/test_distribution.py::test_purview PASSED [ 42%] test/test_distribution.py::test_repertoire_shape PASSED [ 42%] test/test_distribution.py::test_flatten PASSED [ 42%] test/test_json.py::test_jsonify_native PASSED [ 42%] test/test_json.py::test_jsonify_numpy PASSED [ 43%] test/test_json.py::test_json_deserialization PASSED [ 43%] test/test_json.py::test_json_deserialization_non_pyphi_clasess PASSED [ 43%] test/test_json.py::test_deserialization_memoizes_duplicate_objects PASSED [ 43%] test/test_json.py::test_load PASSED [ 43%] test/test_json.py::test_network_from_json PASSED [ 43%] test/test_json.py::test_version_check_during_deserialization PASSED [ 44%] test/test_labels.py::test_defaults PASSED [ 44%] test/test_labels.py::test_labels2indices PASSED [ 44%] test/test_labels.py::test_indices2labels PASSED [ 44%] test/test_labels.py::test_coerce_to_indices PASSED [ 44%] test/test_labels.py::test_iterable PASSED [ 44%] test/test_labels.py::test_len PASSED [ 45%] test/test_labels.py::test_contains PASSED [ 45%] test/test_labels.py::test_instantiation_from_other_node_labels_object PASSED [ 45%] test/test_macro.py::test_all_partitions PASSED [ 45%] test/test_macro.py::test_all_groupings PASSED [ 45%] test/test_macro.py::test_all_coarse_grains PASSED [ 46%] test/test_macro.py::test_all_coarse_grains_for_blackbox PASSED [ 46%] test/test_macro.py::test_all_blackboxes PASSED [ 46%] test/test_macro.py::test_make_mapping PASSED [ 46%] test/test_macro.py::test_make_macro_tpm PASSED [ 46%] test/test_macro.py::test_make_macro_tpm_conditional_independence_check PASSED [ 46%] test/test_macro.py::test_macro_tpm_sbs PASSED [ 47%] test/test_macro.py::test_coarse_grain_indices PASSED [ 47%] test/test_macro.py::test_coarse_grain_state PASSED [ 47%] test/test_macro.py::test_coarse_grain_len PASSED [ 47%] test/test_macro.py::test_blackbox_indices PASSED [ 47%] test/test_macro.py::test_blackbox_state PASSED [ 47%] test/test_macro.py::test_blackbox_same_box PASSED [ 48%] test/test_macro.py::test_blackbox_hidden_from PASSED [ 48%] test/test_macro.py::test_blackbox_outputs_of PASSED [ 48%] test/test_macro.py::test_blackbox_len PASSED [ 48%] test/test_macro.py::test_rebuild_system_tpm PASSED [ 48%] test/test_macro.py::test_remove_singleton_dimensions PASSED [ 48%] test/test_macro.py::test_pack_attrs PASSED [ 49%] test/test_macro.py::test_apply_attrs PASSED [ 49%] test/test_macro_blackbox.py::test_basic_nor_or SKIPPED [ 49%] test/test_macro_blackbox.py::test_xor_propogation_delay SKIPPED [ 49%] test/test_macro_blackbox.py::test_soup XFAIL [ 49%] test/test_macro_blackbox.py::test_coarsegrain_spatial_degenerate SKIPPED [ 50%] test/test_macro_blackbox.py::test_degenerate PASSED [ 50%] test/test_macro_blackbox.py::test_basic_propagation_delay PASSED [ 50%] test/test_macro_subsystem.py::test_cut_indices PASSED [ 50%] test/test_macro_subsystem.py::test_cut_mechanisms PASSED [ 50%] test/test_macro_subsystem.py::test_cut_node_labels_are_for_micro_elements PASSED [ 50%] test/test_macro_subsystem.py::test_concept_str_uses_macro_node_labels PASSED [ 51%] test/test_macro_subsystem.py::test_node_indices_can_be_none PASSED [ 51%] test/test_macro_subsystem.py::test_pass_node_indices_as_a_range PASSED [ 51%] test/test_macro_subsystem.py::test_node_labels PASSED [ 51%] test/test_macro_subsystem.py::test_macro_subsystem PASSED [ 51%] test/test_macro_subsystem.py::test_macro_cut_subsystem PASSED [ 51%] test/test_macro_subsystem.py::test_sparse_blackbox PASSED [ 52%] test/test_macro_subsystem.py::test_dense_blackbox PASSED [ 52%] test/test_macro_subsystem.py::test_cycle_blackbox PASSED [ 52%] test/test_macro_subsystem.py::test_run_tpm PASSED [ 52%] test/test_macro_subsystem.py::test_macro_cut_is_for_micro_indices PASSED [ 52%] test/test_macro_subsystem.py::test_subsystem_equality PASSED [ 52%] test/test_macro_subsystem.py::test_blackbox PASSED [ 53%] test/test_macro_subsystem.py::test_blackbox_external PASSED [ 53%] test/test_macro_subsystem.py::test_coarse_grain PASSED [ 53%] test/test_macro_subsystem.py::test_blackbox_and_coarse_grain XFAIL [ 53%] test/test_macro_subsystem.py::test_blackbox_and_coarse_grain_external PASSED [ 53%] test/test_macro_subsystem.py::test_blackbox_emergence SKIPPED [ 53%] test/test_macro_subsystem.py::test_macro2micro PASSED [ 54%] test/test_macro_subsystem.py::test_blackbox_partial_noise PASSED [ 54%] test/test_macro_subsystem.py::test_blackbox_timescale XFAIL [ 54%] test/test_models.py::test_phi_mechanism_ordering PASSED [ 54%] test/test_models.py::test_sametype_decorator PASSED [ 54%] test/test_models.py::test_numpy_aware_eq_noniterable PASSED [ 55%] test/test_models.py::test_numpy_aware_eq_nparray PASSED [ 55%] test/test_models.py::test_numpy_aware_eq_tuple_nparrays PASSED [ 55%] test/test_models.py::test_numpy_aware_eq_identical PASSED [ 55%] test/test_models.py::test_general_eq_different_attributes PASSED [ 55%] test/test_models.py::test_general_eq_phi_precision_comparison_true PASSED [ 55%] test/test_models.py::test_general_eq_phi_precision_comparison_false PASSED [ 56%] test/test_models.py::test_general_eq_different_mechanism_order PASSED [ 56%] test/test_models.py::test_general_eq_different_purview_order PASSED [ 56%] test/test_models.py::test_general_eq_different_mechanism_and_purview_order PASSED [ 56%] test/test_models.py::test_general_eq_purview_mechanism_none PASSED [ 56%] test/test_models.py::test_general_eq_attribute_missing PASSED [ 56%] test/test_models.py::test_cut_equality PASSED [ 57%] test/test_models.py::test_cut_splits_mechanism PASSED [ 57%] test/test_models.py::test_cut_splits_connections PASSED [ 57%] test/test_models.py::test_cut_all_cut_mechanisms PASSED [ 57%] test/test_models.py::test_cut_matrix PASSED [ 57%] test/test_models.py::test_cut_indices PASSED [ 57%] test/test_models.py::test_apply_cut PASSED [ 58%] test/test_models.py::test_cut_is_null PASSED [ 58%] test/test_models.py::test_null_cut PASSED [ 58%] test/test_models.py::test_null_cut_str PASSED [ 58%] test/test_models.py::test_null_cut_equality PASSED [ 58%] test/test_models.py::test_cuts_can_have_node_labels PASSED [ 59%] test/test_models.py::test_ria_ordering_and_equality PASSED [ 59%] test/test_models.py::test_null_ria PASSED [ 59%] test/test_models.py::test_ria_repr_str PASSED [ 59%] test/test_models.py::test_mice_ordering_by_phi PASSED [ 59%] test/test_models.py::test_mice_odering_by_mechanism PASSED [ 59%] test/test_models.py::test_mice_ordering_by_purview PASSED [ 60%] test/test_models.py::test_mice_equality PASSED [ 60%] test/test_models.py::test_mice_repr_str PASSED [ 60%] test/test_models.py::test_relevant_connections PASSED [ 60%] test/test_models.py::test_damaged PASSED [ 60%] test/test_models.py::test_mic_raises_wrong_direction PASSED [ 60%] test/test_models.py::test_mie_raises_wrong_direction PASSED [ 61%] test/test_models.py::test_concept_ordering PASSED [ 61%] test/test_models.py::test_concept_ordering_by_mechanism PASSED [ 61%] test/test_models.py::test_concept_equality PASSED [ 61%] test/test_models.py::test_concept_equality_phi PASSED [ 61%] test/test_models.py::test_concept_equality_cause_purview_nodes PASSED [ 61%] test/test_models.py::test_concept_equality_effect_purview_nodes PASSED [ 62%] test/test_models.py::test_concept_equality_repertoires PASSED [ 62%] test/test_models.py::test_concept_equality_network PASSED [ 62%] test/test_models.py::test_concept_equality_one_subsystem_is_subset_of_another PASSED [ 62%] test/test_models.py::test_concept_repr_str PASSED [ 62%] test/test_models.py::test_concept_hashing PASSED [ 63%] test/test_models.py::test_concept_hashing_one_subsystem_is_subset_of_another PASSED [ 63%] test/test_models.py::test_concept_emd_eq PASSED [ 63%] test/test_models.py::test_ces_is_still_a_tuple PASSED [ 63%] test/test_models.py::test_ces_repr_str PASSED [ 63%] test/test_models.py::test_ces_are_always_normalized PASSED [ 63%] test/test_models.py::test_ces_labeled_mechanisms PASSED [ 64%] test/test_models.py::test_ces_ordering PASSED [ 64%] test/test_models.py::test_sia_ordering PASSED [ 64%] test/test_models.py::test_sia_ordering_by_subsystem_size PASSED [ 64%] test/test_models.py::test_sia_equality PASSED [ 64%] test/test_models.py::test_sia_repr_str PASSED [ 64%] test/test_models.py::test_indent PASSED [ 65%] test/test_models.py::test_make_reprs_uses___repr__ PASSED [ 65%] test/test_models.py::test_make_reprs_calls_out_to_string PASSED [ 65%] test/test_models.py::test_bipartition_properties PASSED [ 65%] test/test_models.py::test_bipartition_str PASSED [ 65%] test/test_models.py::test_tripartion_properties PASSED [ 65%] test/test_models.py::test_tripartion_str PASSED [ 66%] test/test_models.py::test_partition_normalize PASSED [ 66%] test/test_models.py::test_partition_normalize_preserves_labels PASSED [ 66%] test/test_models.py::test_partition_eq_hash PASSED [ 66%] test/test_network.py::test_network_init_validation PASSED [ 66%] test/test_network.py::test_network_creates_fully_connected_cm_by_default PASSED [ 67%] test/test_network.py::test_potential_purviews PASSED [ 67%] test/test_network.py::test_node_labels PASSED [ 67%] test/test_network.py::test_num_states PASSED [ 67%] test/test_network.py::test_repr PASSED [ 67%] test/test_network.py::test_str PASSED [ 67%] test/test_network.py::test_len PASSED [ 68%] test/test_network.py::test_size PASSED [ 68%] test/test_node.py::test_node_init_tpm PASSED [ 68%] test/test_node.py::test_node_init_inputs PASSED [ 68%] test/test_node.py::test_node_eq PASSED [ 68%] test/test_node.py::test_node_neq_by_index PASSED [ 68%] test/test_node.py::test_node_neq_by_state PASSED [ 69%] test/test_node.py::test_repr PASSED [ 69%] test/test_node.py::test_str PASSED [ 69%] test/test_node.py::test_expand_tpm PASSED [ 69%] test/test_node.py::test_generate_nodes PASSED [ 69%] test/test_node.py::test_generate_nodes_default_labels PASSED [ 69%] test/test_parallel.py::test_num_processes PASSED [ 70%] test/test_parallel.py::test_map_square PASSED [ 70%] test/test_parallel.py::test_materialize_list_only_when_needed PASSED [ 70%] test/test_parallel.py::test_parallel_exception_handling PASSED [ 70%] test/test_partition.py::test_partitions PASSED [ 70%] test/test_partition.py::test_directed_bipartition PASSED [ 71%] test/test_partition.py::test_directed_tripartition_indices PASSED [ 71%] test/test_partition.py::test_k_partition PASSED [ 71%] test/test_partition.py::test_mip_bipartitions PASSED [ 71%] test/test_partition.py::test_wedge_partitions PASSED [ 71%] test/test_partition.py::test_partitioned_repertoire_with_tripartition PASSED [ 71%] test/test_partition.py::test_tripartitions_choses_smallest_purview PASSED [ 72%] test/test_partition.py::test_all_partitions PASSED [ 72%] test/test_partition.py::test_partition_types PASSED [ 72%] test/test_registry.py::test_registry PASSED [ 72%] test/test_subsystem.py::test_subsystem_validation PASSED [ 72%] test/test_subsystem.py::test_validate_cut_nodes_equal_subsystem_nodes PASSED [ 72%] test/test_subsystem.py::test_empty_init PASSED [ 73%] test/test_subsystem.py::test_default_nodes PASSED [ 73%] test/test_subsystem.py::test_eq PASSED [ 73%] test/test_subsystem.py::test_cmp PASSED [ 73%] test/test_subsystem.py::test_len PASSED [ 73%] test/test_subsystem.py::test_size PASSED [ 73%] test/test_subsystem.py::test_hash PASSED [ 74%] test/test_subsystem.py::test_indices2nodes PASSED [ 74%] test/test_subsystem.py::test_indices2nodes_with_bad_indices PASSED [ 74%] test/test_subsystem.py::test_is_cut PASSED [ 74%] test/test_subsystem.py::test_proper_state PASSED [ 74%] test/test_subsystem.py::test_apply_cut PASSED [ 75%] test/test_subsystem.py::test_cut_indices PASSED [ 75%] test/test_subsystem.py::test_cut_mechanisms PASSED [ 75%] test/test_subsystem.py::test_cut_node_labels PASSED [ 75%] test/test_subsystem.py::test_specify_elements_with_labels PASSED [ 75%] test/test_subsystem.py::test_null_concept PASSED [ 75%] test/test_subsystem.py::test_concept_no_mechanism PASSED [ 76%] test/test_subsystem.py::test_concept_nonexistent PASSED [ 76%] test/test_subsystem_cause_effect_info.py::test_cause_info PASSED [ 76%] test/test_subsystem_cause_effect_info.py::test_effect_info PASSED [ 76%] test/test_subsystem_cause_effect_info.py::test_cause_effect_info PASSED [ 76%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem0-mechanism0-purview0-expected0] PASSED [ 76%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem1-mechanism1-purview1-expected1] PASSED [ 77%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem2-mechanism2-purview2-expected2] PASSED [ 77%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem3-mechanism3-purview3-expected3] PASSED [ 77%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem4-mechanism4-purview4-expected4] PASSED [ 77%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem5-mechanism5-purview5-expected5] PASSED [ 77%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem6-mechanism6-purview6-expected6] PASSED [ 77%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem7-mechanism7-purview7-expected7] PASSED [ 78%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem8-mechanism8-purview8-expected8] PASSED [ 78%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem9-mechanism9-purview9-expected9] PASSED [ 78%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem10-mechanism10-purview10-expected10] PASSED [ 78%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem11-mechanism11-purview11-expected11] PASSED [ 78%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem12-mechanism12-purview12-expected12] PASSED [ 78%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem13-mechanism13-purview13-expected13] PASSED [ 79%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem14-mechanism14-purview14-expected14] PASSED [ 79%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[cause_repertoire-subsystem15-mechanism15-purview15-expected15] PASSED [ 79%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem16-mechanism16-purview16-expected16] PASSED [ 79%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem17-mechanism17-purview17-expected17] PASSED [ 79%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem18-mechanism18-purview18-expected18] PASSED [ 80%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem19-mechanism19-purview19-expected19] PASSED [ 80%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem20-mechanism20-purview20-expected20] PASSED [ 80%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem21-mechanism21-purview21-expected21] PASSED [ 80%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem22-mechanism22-purview22-expected22] PASSED [ 80%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem23-mechanism23-purview23-expected23] PASSED [ 80%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem24-mechanism24-purview24-expected24] PASSED [ 81%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem25-mechanism25-purview25-expected25] PASSED [ 81%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem26-mechanism26-purview26-expected26] PASSED [ 81%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem27-mechanism27-purview27-expected27] PASSED [ 81%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem28-mechanism28-purview28-expected28] PASSED [ 81%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem29-mechanism29-purview29-expected29] PASSED [ 81%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem30-mechanism30-purview30-expected30] PASSED [ 82%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem31-mechanism31-purview31-expected31] PASSED [ 82%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem32-mechanism32-purview32-expected32] PASSED [ 82%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem33-mechanism33-purview33-expected33] PASSED [ 82%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem34-mechanism34-purview34-expected34] PASSED [ 82%] test/test_subsystem_cause_effect_repertoire.py::test_cause_and_effect_repertoire[effect_repertoire-subsystem35-mechanism35-purview35-expected35] PASSED [ 82%] test/test_subsystem_cause_effect_repertoire.py::test_repertoire_wrong_direction_error PASSED [ 83%] test/test_subsystem_expand.py::test_expand_cause_repertoire PASSED [ 83%] test/test_subsystem_expand.py::test_expand_effect_repertoire PASSED [ 83%] test/test_subsystem_expand.py::test_expand_repertoire_purview_must_be_subset_of_new_purview PASSED [ 83%] test/test_subsystem_phi_max.py::test_find_mice[None-CAUSE-expected0] PASSED [ 83%] test/test_subsystem_phi_max.py::test_find_mice[None-CAUSE-expected1] PASSED [ 84%] test/test_subsystem_phi_max.py::test_find_mice[None-CAUSE-expected2] PASSED [ 84%] test/test_subsystem_phi_max.py::test_find_mice[None-CAUSE-expected3] PASSED [ 84%] test/test_subsystem_phi_max.py::test_find_mice[None-EFFECT-expected4] PASSED [ 84%] test/test_subsystem_phi_max.py::test_find_mice[None-EFFECT-expected5] PASSED [ 84%] test/test_subsystem_phi_max.py::test_find_mice[None-EFFECT-expected6] PASSED [ 84%] test/test_subsystem_phi_max.py::test_find_mice[None-EFFECT-expected7] PASSED [ 85%] test/test_subsystem_phi_max.py::test_find_mice[cut8-CAUSE-expected8] PASSED [ 85%] test/test_subsystem_phi_max.py::test_find_mice[cut9-CAUSE-expected9] PASSED [ 85%] test/test_subsystem_phi_max.py::test_find_mice[cut10-CAUSE-expected10] PASSED [ 85%] test/test_subsystem_phi_max.py::test_find_mice[cut11-CAUSE-expected11] PASSED [ 85%] test/test_subsystem_phi_max.py::test_find_mice[cut12-EFFECT-expected12] PASSED [ 85%] test/test_subsystem_phi_max.py::test_find_mice[cut13-EFFECT-expected13] PASSED [ 86%] test/test_subsystem_phi_max.py::test_find_mice[cut14-EFFECT-expected14] PASSED [ 86%] test/test_subsystem_phi_max.py::test_find_mice[cut15-EFFECT-expected15] PASSED [ 86%] test/test_subsystem_phi_max.py::test_find_mice_empty PASSED [ 86%] test/test_subsystem_phi_max.py::test_mic_or_mie[None-CAUSE-expected0] PASSED [ 86%] test/test_subsystem_phi_max.py::test_mic_or_mie[None-CAUSE-expected1] PASSED [ 86%] test/test_subsystem_phi_max.py::test_mic_or_mie[None-CAUSE-expected2] PASSED [ 87%] test/test_subsystem_phi_max.py::test_mic_or_mie[None-CAUSE-expected3] PASSED [ 87%] test/test_subsystem_phi_max.py::test_mic_or_mie[None-EFFECT-expected4] PASSED [ 87%] test/test_subsystem_phi_max.py::test_mic_or_mie[None-EFFECT-expected5] PASSED [ 87%] test/test_subsystem_phi_max.py::test_mic_or_mie[None-EFFECT-expected6] PASSED [ 87%] test/test_subsystem_phi_max.py::test_mic_or_mie[None-EFFECT-expected7] PASSED [ 88%] test/test_subsystem_phi_max.py::test_mic_or_mie[cut8-CAUSE-expected8] PASSED [ 88%] test/test_subsystem_phi_max.py::test_mic_or_mie[cut9-CAUSE-expected9] PASSED [ 88%] test/test_subsystem_phi_max.py::test_mic_or_mie[cut10-CAUSE-expected10] PASSED [ 88%] test/test_subsystem_phi_max.py::test_mic_or_mie[cut11-CAUSE-expected11] PASSED [ 88%] test/test_subsystem_phi_max.py::test_mic_or_mie[cut12-EFFECT-expected12] PASSED [ 88%] test/test_subsystem_phi_max.py::test_mic_or_mie[cut13-EFFECT-expected13] PASSED [ 89%] test/test_subsystem_phi_max.py::test_mic_or_mie[cut14-EFFECT-expected14] PASSED [ 89%] test/test_subsystem_phi_max.py::test_mic_or_mie[cut15-EFFECT-expected15] PASSED [ 89%] test/test_subsystem_phi_max.py::test_phi_max[None-mechanism0-0.25] PASSED [ 89%] test/test_subsystem_phi_max.py::test_phi_max[None-mechanism1-0.5] PASSED [ 89%] test/test_subsystem_phi_max.py::test_phi_max[None-mechanism2-0.333333] PASSED [ 89%] test/test_subsystem_phi_max.py::test_phi_max[None-mechanism3-0.5] PASSED [ 90%] test/test_subsystem_phi_max.py::test_phi_max[cut4-mechanism4-0.0] PASSED [ 90%] test/test_subsystem_phi_max.py::test_phi_max[cut5-mechanism5-0.5] PASSED [ 90%] test/test_subsystem_phi_max.py::test_phi_max[cut6-mechanism6-0.0] PASSED [ 90%] test/test_subsystem_phi_max.py::test_phi_max[cut7-mechanism7-0.0] PASSED [ 90%] test/test_subsystem_small_phi.py::test_find_mip[CAUSE-subsystem0-None-mechanism0-purview0-expected0] PASSED [ 90%] test/test_subsystem_small_phi.py::test_find_mip[CAUSE-subsystem1-cut1-mechanism1-purview1-expected1] PASSED [ 91%] test/test_subsystem_small_phi.py::test_find_mip[EFFECT-subsystem2-None-mechanism2-purview2-expected2] PASSED [ 91%] test/test_subsystem_small_phi.py::test_find_mip[EFFECT-subsystem3-cut3-mechanism3-purview3-expected3] PASSED [ 91%] test/test_subsystem_small_phi.py::test_find_mip[EFFECT-subsystem4-cut4-mechanism4-purview4-expected4] PASSED [ 91%] test/test_subsystem_small_phi.py::test_find_mip[EFFECT-subsystem5-cut5-mechanism5-purview5-expected5] PASSED [ 91%] test/test_subsystem_small_phi.py::test_find_mip[EFFECT-subsystem6-cut6-mechanism6-purview6-expected6] PASSED [ 92%] test/test_subsystem_small_phi.py::test_cause_mip PASSED [ 92%] test/test_subsystem_small_phi.py::test_effect_mip PASSED [ 92%] test/test_subsystem_small_phi.py::test_phi_cause_mip PASSED [ 92%] test/test_subsystem_small_phi.py::test_phi_cause_mip_reducible PASSED [ 92%] test/test_subsystem_small_phi.py::test_phi_effect_mip PASSED [ 92%] test/test_subsystem_small_phi.py::test_phi_effect_mip_reducible PASSED [ 93%] test/test_subsystem_small_phi.py::test_phi PASSED [ 93%] test/test_subsystem_unconstrained_repertoire.py::test_unconstrained_cause_repertoire_matlab_0 PASSED [ 93%] test/test_subsystem_unconstrained_repertoire.py::test_unconstrained_cause_repertoire_matlab_1 PASSED [ 93%] test/test_subsystem_unconstrained_repertoire.py::test_unconstrained_cause_repertoire_matlab_2 PASSED [ 93%] test/test_subsystem_unconstrained_repertoire.py::test_unconstrained_effect_repertoire_matlab_0 PASSED [ 93%] test/test_subsystem_unconstrained_repertoire.py::test_unconstrained_effect_repertoire_matlab_1 PASSED [ 94%] test/test_subsystem_unconstrained_repertoire.py::test_unconstrained_effect_repertoire_matlab_2 PASSED [ 94%] test/test_tpm.py::test_is_state_by_state PASSED [ 94%] test/test_tpm.py::test_expand_tpm PASSED [ 94%] test/test_tpm.py::test_marginalize_out PASSED [ 94%] test/test_tpm.py::test_infer_cm PASSED [ 94%] test/test_tpm.py::test_reconstitute_tpm PASSED [ 95%] test/test_utils.py::test_all_states PASSED [ 95%] test/test_utils.py::test_eq PASSED [ 95%] test/test_utils.py::test_combs_for_1D_input PASSED [ 95%] test/test_utils.py::test_combs_r_is_0 PASSED [ 95%] test/test_utils.py::test_comb_indices PASSED [ 96%] test/test_utils.py::test_powerset PASSED [ 96%] test/test_utils.py::test_powerset_takes_iterable PASSED [ 96%] test/test_utils.py::test_np_hashable PASSED [ 96%] test/test_utils.py::test_time_annotated PASSED [ 96%] test/test_validate.py::test_validate_direction PASSED [ 96%] test/test_validate.py::test_validate_tpm_wrong_shape PASSED [ 97%] test/test_validate.py::test_validate_tpm_nonbinary_nodes PASSED [ 97%] test/test_validate.py::test_validate_tpm_conditional_independence PASSED [ 97%] test/test_validate.py::test_validate_connectivity_matrix_valid PASSED [ 97%] test/test_validate.py::test_validate_connectivity_matrix_not_square PASSED [ 97%] test/test_validate.py::test_validate_connectivity_matrix_not_2D PASSED [ 97%] test/test_validate.py::test_validate_connectivity_matrix_not_binary PASSED [ 98%] test/test_validate.py::test_validate_network_wrong_cm_size PASSED [ 98%] test/test_validate.py::test_validate_is_network PASSED [ 98%] test/test_validate.py::test_validate_state_no_error_1 PASSED [ 98%] test/test_validate.py::test_validate_state_error PASSED [ 98%] test/test_validate.py::test_validate_state_no_error_2 PASSED [ 98%] test/test_validate.py::test_validate_node_labels PASSED [ 99%] test/test_validate.py::test_validate_time_scale PASSED [ 99%] test/test_validate.py::test_validate_coarse_grain PASSED [ 99%] test/test_validate.py::test_validate_blackbox PASSED [ 99%] test/test_validate.py::test_validate_partition PASSED [ 99%] test/test_validate.py::test_validate_blackbox_and_coarsegrain PASSED [100%] =============================== warnings summary =============================== test/test_models.py::test_numpy_aware_eq_nparray /usr/lib64/python3.9/site-packages/numpy/core/_asarray.py:102: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray. return array(a, dtype, copy=False, order=order) -- Docs: https://docs.pytest.org/en/stable/warnings.html ============================= slowest 5 durations ============================== 30.02s call docs/examples/emergence.rst::emergence.rst 21.91s call docs/examples/2014paper.rst::2014paper.rst 12.29s call test/test_macro_blackbox.py::test_soup 10.24s call test/test_macro_blackbox.py::test_degenerate 3.12s call docs/examples/magic_cut.rst::magic_cut.rst ====== 552 passed, 21 skipped, 3 xfailed, 1 warning in 108.45s (0:01:48) ======= + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-pyphi-1.2.0-8.fc34.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.WoP8jG + umask 022 + cd /builddir/build/BUILD + cd pyphi-1.2.0 + DOCDIR=/builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python3-pyphi + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python3-pyphi + cp -pr README.md /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python3-pyphi + cp -pr CHANGELOG.md /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python3-pyphi + cp -pr CACHING.rst /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python3-pyphi + cp -pr redis.conf /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python3-pyphi + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.7PuzyE + umask 022 + cd /builddir/build/BUILD + cd pyphi-1.2.0 + LICENSEDIR=/builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/licenses/python3-pyphi + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/licenses/python3-pyphi + cp -pr LICENSE.md /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/licenses/python3-pyphi + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-pyphi = 1.2.0-8.fc34 python3-pyphi = 1.2.0-8.fc34 python3.9-pyphi = 1.2.0-8.fc34 python3.9dist(pyphi) = 1.2 python3dist(pyphi) = 1.2 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.9 python3.9dist(decorator) >= 4 python3.9dist(joblib) >= 0.8 python3.9dist(numpy) >= 1.11 python3.9dist(psutil) >= 2.1.1 python3.9dist(pyemd) >= 0.3 python3.9dist(pymongo) >= 2.7.1 python3.9dist(pyyaml) >= 3.13 python3.9dist(redis) >= 2.10.5 python3.9dist(scipy) >= 0.13.3 python3.9dist(tblib) >= 1.3.2 python3.9dist(tqdm) >= 4.20 Obsoletes: python-pyphi < 1.2.0-8.fc34 Processing files: python-pyphi-doc-1.2.0-8.fc34.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.twNnmy + umask 022 + cd /builddir/build/BUILD + cd pyphi-1.2.0 + DOCDIR=/builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python-pyphi-doc + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python-pyphi-doc + cp -pr docs/_build/html/ /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/doc/python-pyphi-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Ohb6zl + umask 022 + cd /builddir/build/BUILD + cd pyphi-1.2.0 + LICENSEDIR=/builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/licenses/python-pyphi-doc + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/licenses/python-pyphi-doc + cp -pr LICENSE.md /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64/usr/share/licenses/python-pyphi-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-pyphi-doc = 1.2.0-8.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64 Wrote: /builddir/build/RPMS/python-pyphi-doc-1.2.0-8.fc34.noarch.rpm Wrote: /builddir/build/RPMS/python3-pyphi-1.2.0-8.fc34.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.4itKsm + umask 022 + cd /builddir/build/BUILD + cd pyphi-1.2.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-pyphi-1.2.0-8.fc34.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0