Mock Version: 5.0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b27d3dcaa2fe49728946b9985179d5a4', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1689984000 Wrote: /builddir/build/SRPMS/python-fslpy-3.13.3-1.fc40.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'ba228e2bc104439b819166b0274c829e', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1689984000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.TBlzD1 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf fslpy-3.13.3 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/fslpy-3.13.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd fslpy-3.13.3 + rm -rf /builddir/build/BUILD/fslpy-3.13.3-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/fslpy-3.13.3-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'python-fslpy-3.13.3 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + cat requirements-extra.txt + find . -type f -name '*.py' -exec sed -i '/^#![ ]*\/usr\/bin\/env python$/ d' '{}' ';' + sed -i '/^#![ ]*\/usr\/bin\/env python3$/ d' fsl/wrappers/tbss.py + find . -type f -name '*.py' -exec sed -i 's/#![ ]*\/usr\/bin\/env python$/#!\/usr\/bin\/python3/' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.M7T72H + umask 022 + cd /builddir/build/BUILD + cd fslpy-3.13.3 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/fslpy-3.13.3/pyproject-wheeldir --output /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.7.2) Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-fslpy-3.13.3-1.fc40.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '56318212a72640c59b10302e061fcc44', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1689984000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.to3ZoZ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf fslpy-3.13.3 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/fslpy-3.13.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd fslpy-3.13.3 + rm -rf /builddir/build/BUILD/fslpy-3.13.3-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/fslpy-3.13.3-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'python-fslpy-3.13.3 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + cat requirements-extra.txt + find . -type f -name '*.py' -exec sed -i '/^#![ ]*\/usr\/bin\/env python$/ d' '{}' ';' + sed -i '/^#![ ]*\/usr\/bin\/env python3$/ d' fsl/wrappers/tbss.py + find . -type f -name '*.py' -exec sed -i 's/#![ ]*\/usr\/bin\/env python$/#!\/usr\/bin\/python3/' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.WfQCw4 + umask 022 + cd /builddir/build/BUILD + cd fslpy-3.13.3 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/fslpy-3.13.3/pyproject-wheeldir --output /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.7.2) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.41.1) running egg_info writing fslpy.egg-info/PKG-INFO writing dependency_links to fslpy.egg-info/dependency_links.txt writing entry points to fslpy.egg-info/entry_points.txt writing requirements to fslpy.egg-info/requires.txt writing top-level names to fslpy.egg-info/top_level.txt reading manifest file 'fslpy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'doc/html' adding license file 'LICENSE' writing manifest file 'fslpy.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.1) running dist_info writing fslpy.egg-info/PKG-INFO writing dependency_links to fslpy.egg-info/dependency_links.txt writing entry points to fslpy.egg-info/entry_points.txt writing requirements to fslpy.egg-info/requires.txt writing top-level names to fslpy.egg-info/top_level.txt reading manifest file 'fslpy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'doc/html' adding license file 'LICENSE' writing manifest file 'fslpy.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/fslpy-3.13.3/fslpy-3.13.3.dist-info' Handling h5py >=2.9 from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: h5py >=2.9 Handling nibabel >=2.4 from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: nibabel >=2.4 Handling numpy >=1 from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: numpy >=1 Handling scipy >=0.18 from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: scipy >=0.18 Handling dill from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: dill Handling indexed-gzip >=0.7.0 from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: indexed-gzip >=0.7.0 Handling wxpython ==4.* from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: wxpython ==4.* Handling trimesh >=2.37.29 from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: trimesh >=2.37.29 Handling rtree >=0.8.3 from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: rtree >=0.8.3 Handling Pillow >=3.2.0 from hook generated metadata: Requires-Dist (fslpy) Requirement not satisfied: Pillow >=3.2.0 Handling indexed-gzip >=0.7.0 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: indexed-gzip >=0.7.0 ; extra == 'extras' Handling wxpython ==4.* ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: wxpython ==4.* ; extra == 'extras' Handling trimesh >=2.37.29 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: trimesh >=2.37.29 ; extra == 'extras' Handling rtree >=0.8.3 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: rtree >=0.8.3 ; extra == 'extras' Handling Pillow >=3.2.0 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: Pillow >=3.2.0 ; extra == 'extras' + cat /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-buildrequires + rm -rfv fslpy-3.13.3.dist-info/ removed 'fslpy-3.13.3.dist-info/LICENSE' removed 'fslpy-3.13.3.dist-info/METADATA' removed 'fslpy-3.13.3.dist-info/entry_points.txt' removed 'fslpy-3.13.3.dist-info/top_level.txt' removed directory 'fslpy-3.13.3.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-fslpy-3.13.3-1.fc40.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'a5e5f97d69814b73bc7ee87142b6e243', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1689984000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.raCDPN + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf fslpy-3.13.3 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/fslpy-3.13.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd fslpy-3.13.3 + rm -rf /builddir/build/BUILD/fslpy-3.13.3-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/fslpy-3.13.3-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'python-fslpy-3.13.3 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + cat requirements-extra.txt + find . -type f -name '*.py' -exec sed -i '/^#![ ]*\/usr\/bin\/env python$/ d' '{}' ';' + sed -i '/^#![ ]*\/usr\/bin\/env python3$/ d' fsl/wrappers/tbss.py + find . -type f -name '*.py' -exec sed -i 's/#![ ]*\/usr\/bin\/env python$/#!\/usr\/bin\/python3/' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.SgaP1Q + umask 022 + cd /builddir/build/BUILD + cd fslpy-3.13.3 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/fslpy-3.13.3/pyproject-wheeldir --output /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.7.2) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.41.1) running egg_info writing fslpy.egg-info/PKG-INFO writing dependency_links to fslpy.egg-info/dependency_links.txt writing entry points to fslpy.egg-info/entry_points.txt writing requirements to fslpy.egg-info/requires.txt writing top-level names to fslpy.egg-info/top_level.txt reading manifest file 'fslpy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'doc/html' adding license file 'LICENSE' writing manifest file 'fslpy.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.1) running dist_info writing fslpy.egg-info/PKG-INFO writing dependency_links to fslpy.egg-info/dependency_links.txt writing entry points to fslpy.egg-info/entry_points.txt writing requirements to fslpy.egg-info/requires.txt writing top-level names to fslpy.egg-info/top_level.txt reading manifest file 'fslpy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'doc/html' adding license file 'LICENSE' writing manifest file 'fslpy.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/fslpy-3.13.3/fslpy-3.13.3.dist-info' Handling h5py >=2.9 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: h5py >=2.9 (installed: h5py 3.8.0) Handling nibabel >=2.4 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: nibabel >=2.4 (installed: nibabel 5.1.0) Handling numpy >=1 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: numpy >=1 (installed: numpy 1.24.4) Handling scipy >=0.18 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: scipy >=0.18 (installed: scipy 1.11.1) Handling dill from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: dill (installed: dill 0.3.7) Handling indexed-gzip >=0.7.0 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: indexed-gzip >=0.7.0 (installed: indexed-gzip 1.8.3) Handling wxpython ==4.* from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: wxpython ==4.* (installed: wxpython 4.2.1) Handling trimesh >=2.37.29 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: trimesh >=2.37.29 (installed: trimesh 3.23.0) Handling rtree >=0.8.3 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: rtree >=0.8.3 (installed: rtree 1.0.0) Handling Pillow >=3.2.0 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: Pillow >=3.2.0 (installed: Pillow 10.0.0) Handling indexed-gzip >=0.7.0 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: indexed-gzip >=0.7.0 ; extra == 'extras' Handling wxpython ==4.* ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: wxpython ==4.* ; extra == 'extras' Handling trimesh >=2.37.29 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: trimesh >=2.37.29 ; extra == 'extras' Handling rtree >=0.8.3 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: rtree >=0.8.3 ; extra == 'extras' Handling Pillow >=3.2.0 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: Pillow >=3.2.0 ; extra == 'extras' + cat /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-buildrequires + rm -rfv fslpy-3.13.3.dist-info/ removed 'fslpy-3.13.3.dist-info/LICENSE' removed 'fslpy-3.13.3.dist-info/METADATA' removed 'fslpy-3.13.3.dist-info/entry_points.txt' removed 'fslpy-3.13.3.dist-info/top_level.txt' removed directory 'fslpy-3.13.3.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-fslpy-3.13.3-1.fc40.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'e817eded3c1642578daa6a57163f975c', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1692097484.296108/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._lztnbb2:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-fslpy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1689984000 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.RUrRjU + umask 022 + cd /builddir/build/BUILD + cd fslpy-3.13.3 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/fslpy-3.13.3/pyproject-wheeldir --output /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.7.2) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.41.1) running egg_info writing fslpy.egg-info/PKG-INFO writing dependency_links to fslpy.egg-info/dependency_links.txt writing entry points to fslpy.egg-info/entry_points.txt writing requirements to fslpy.egg-info/requires.txt writing top-level names to fslpy.egg-info/top_level.txt reading manifest file 'fslpy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'doc/html' adding license file 'LICENSE' writing manifest file 'fslpy.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.1) running dist_info writing fslpy.egg-info/PKG-INFO writing dependency_links to fslpy.egg-info/dependency_links.txt writing entry points to fslpy.egg-info/entry_points.txt writing requirements to fslpy.egg-info/requires.txt writing top-level names to fslpy.egg-info/top_level.txt reading manifest file 'fslpy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'doc/html' adding license file 'LICENSE' writing manifest file 'fslpy.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/fslpy-3.13.3/fslpy-3.13.3.dist-info' Handling h5py >=2.9 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: h5py >=2.9 (installed: h5py 3.8.0) Handling nibabel >=2.4 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: nibabel >=2.4 (installed: nibabel 5.1.0) Handling numpy >=1 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: numpy >=1 (installed: numpy 1.24.4) Handling scipy >=0.18 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: scipy >=0.18 (installed: scipy 1.11.1) Handling dill from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: dill (installed: dill 0.3.7) Handling indexed-gzip >=0.7.0 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: indexed-gzip >=0.7.0 (installed: indexed-gzip 1.8.3) Handling wxpython ==4.* from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: wxpython ==4.* (installed: wxpython 4.2.1) Handling trimesh >=2.37.29 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: trimesh >=2.37.29 (installed: trimesh 3.23.0) Handling rtree >=0.8.3 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: rtree >=0.8.3 (installed: rtree 1.0.0) Handling Pillow >=3.2.0 from hook generated metadata: Requires-Dist (fslpy) Requirement satisfied: Pillow >=3.2.0 (installed: Pillow 10.0.0) Handling indexed-gzip >=0.7.0 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: indexed-gzip >=0.7.0 ; extra == 'extras' Handling wxpython ==4.* ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: wxpython ==4.* ; extra == 'extras' Handling trimesh >=2.37.29 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: trimesh >=2.37.29 ; extra == 'extras' Handling rtree >=0.8.3 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: rtree >=0.8.3 ; extra == 'extras' Handling Pillow >=3.2.0 ; extra == 'extras' from hook generated metadata: Requires-Dist (fslpy) Ignoring alien requirement: Pillow >=3.2.0 ; extra == 'extras' + cat /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-buildrequires + rm -rfv fslpy-3.13.3.dist-info/ removed 'fslpy-3.13.3.dist-info/LICENSE' removed 'fslpy-3.13.3.dist-info/METADATA' removed 'fslpy-3.13.3.dist-info/top_level.txt' removed 'fslpy-3.13.3.dist-info/entry_points.txt' removed directory 'fslpy-3.13.3.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ZDKWjN + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd fslpy-3.13.3 + mkdir -p /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/fslpy-3.13.3/pyproject-wheeldir Processing /builddir/build/BUILD/fslpy-3.13.3 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info writing /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'doc/html' adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-modern-metadata-wyestanf/fslpy-3.13.3.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: fslpy Building wheel for fslpy (pyproject.toml): started Running command Building wheel for fslpy (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/fsl copying fsl/version.py -> build/lib/fsl creating build/lib/fsl/wrappers copying fsl/wrappers/wrapperutils.py -> build/lib/fsl/wrappers copying fsl/wrappers/randomise.py -> build/lib/fsl/wrappers copying fsl/wrappers/oxford_asl.py -> build/lib/fsl/wrappers copying fsl/wrappers/misc.py -> build/lib/fsl/wrappers copying fsl/wrappers/melodic.py -> build/lib/fsl/wrappers copying fsl/wrappers/fugue.py -> build/lib/fsl/wrappers copying fsl/wrappers/fslstats.py -> build/lib/fsl/wrappers copying fsl/wrappers/fslmaths.py -> build/lib/fsl/wrappers copying fsl/wrappers/fsl_sub.py -> build/lib/fsl/wrappers copying fsl/wrappers/fsl_anat.py -> build/lib/fsl/wrappers copying fsl/wrappers/fnirt.py -> build/lib/fsl/wrappers copying fsl/wrappers/flirt.py -> build/lib/fsl/wrappers copying fsl/wrappers/first.py -> build/lib/fsl/wrappers copying fsl/wrappers/feat.py -> build/lib/fsl/wrappers copying fsl/wrappers/fast.py -> build/lib/fsl/wrappers copying fsl/wrappers/epi_reg.py -> build/lib/fsl/wrappers copying fsl/wrappers/eddy.py -> build/lib/fsl/wrappers copying fsl/wrappers/dtifit.py -> build/lib/fsl/wrappers copying fsl/wrappers/bianca.py -> build/lib/fsl/wrappers copying fsl/wrappers/bet.py -> build/lib/fsl/wrappers copying fsl/wrappers/bedpostx.py -> build/lib/fsl/wrappers copying fsl/wrappers/avwutils.py -> build/lib/fsl/wrappers copying fsl/wrappers/__init__.py -> build/lib/fsl/wrappers copying fsl/wrappers/tbss.py -> build/lib/fsl/wrappers creating build/lib/fsl/utils copying fsl/utils/weakfuncref.py -> build/lib/fsl/utils copying fsl/utils/tempdir.py -> build/lib/fsl/utils copying fsl/utils/settings.py -> build/lib/fsl/utils copying fsl/utils/run.py -> build/lib/fsl/utils copying fsl/utils/platform.py -> build/lib/fsl/utils copying fsl/utils/path.py -> build/lib/fsl/utils copying fsl/utils/parse_data.py -> build/lib/fsl/utils copying fsl/utils/notifier.py -> build/lib/fsl/utils copying fsl/utils/naninfrange.py -> build/lib/fsl/utils copying fsl/utils/meta.py -> build/lib/fsl/utils copying fsl/utils/memoize.py -> build/lib/fsl/utils copying fsl/utils/imcp.py -> build/lib/fsl/utils copying fsl/utils/idle.py -> build/lib/fsl/utils copying fsl/utils/fslsub.py -> build/lib/fsl/utils copying fsl/utils/ensure.py -> build/lib/fsl/utils copying fsl/utils/deprecated.py -> build/lib/fsl/utils copying fsl/utils/cache.py -> build/lib/fsl/utils copying fsl/utils/bids.py -> build/lib/fsl/utils copying fsl/utils/assertions.py -> build/lib/fsl/utils copying fsl/utils/__init__.py -> build/lib/fsl/utils creating build/lib/fsl/transform copying fsl/transform/x5.py -> build/lib/fsl/transform copying fsl/transform/nonlinear.py -> build/lib/fsl/transform copying fsl/transform/fnirt.py -> build/lib/fsl/transform copying fsl/transform/flirt.py -> build/lib/fsl/transform copying fsl/transform/affine.py -> build/lib/fsl/transform copying fsl/transform/__init__.py -> build/lib/fsl/transform creating build/lib/fsl/scripts copying fsl/scripts/resample_image.py -> build/lib/fsl/scripts copying fsl/scripts/remove_ext.py -> build/lib/fsl/scripts copying fsl/scripts/imtest.py -> build/lib/fsl/scripts copying fsl/scripts/imrm.py -> build/lib/fsl/scripts copying fsl/scripts/immv.py -> build/lib/fsl/scripts copying fsl/scripts/imln.py -> build/lib/fsl/scripts copying fsl/scripts/imglob.py -> build/lib/fsl/scripts copying fsl/scripts/imcp.py -> build/lib/fsl/scripts copying fsl/scripts/fsl_ents.py -> build/lib/fsl/scripts copying fsl/scripts/fsl_convert_x5.py -> build/lib/fsl/scripts copying fsl/scripts/fsl_apply_x5.py -> build/lib/fsl/scripts copying fsl/scripts/fsl_abspath.py -> build/lib/fsl/scripts copying fsl/scripts/atlasq.py -> build/lib/fsl/scripts copying fsl/scripts/Vest2Text.py -> build/lib/fsl/scripts copying fsl/scripts/Text2Vest.py -> build/lib/fsl/scripts creating build/lib/fsl/data copying fsl/data/vtk.py -> build/lib/fsl/data copying fsl/data/volumelabels.py -> build/lib/fsl/data copying fsl/data/vest.py -> build/lib/fsl/data copying fsl/data/utils.py -> build/lib/fsl/data copying fsl/data/mghimage.py -> build/lib/fsl/data copying fsl/data/mesh.py -> build/lib/fsl/data copying fsl/data/melodicimage.py -> build/lib/fsl/data copying fsl/data/melodicanalysis.py -> build/lib/fsl/data copying fsl/data/imagewrapper.py -> build/lib/fsl/data copying fsl/data/image.py -> build/lib/fsl/data copying fsl/data/gifti.py -> build/lib/fsl/data copying fsl/data/freesurfer.py -> build/lib/fsl/data copying fsl/data/fixlabels.py -> build/lib/fsl/data copying fsl/data/featimage.py -> build/lib/fsl/data copying fsl/data/featdesign.py -> build/lib/fsl/data copying fsl/data/featanalysis.py -> build/lib/fsl/data copying fsl/data/dtifit.py -> build/lib/fsl/data copying fsl/data/dicom.py -> build/lib/fsl/data copying fsl/data/constants.py -> build/lib/fsl/data copying fsl/data/cifti.py -> build/lib/fsl/data copying fsl/data/bitmap.py -> build/lib/fsl/data copying fsl/data/atlases.py -> build/lib/fsl/data copying fsl/data/__init__.py -> build/lib/fsl/data creating build/lib/fsl/utils/image copying fsl/utils/image/roi.py -> build/lib/fsl/utils/image copying fsl/utils/image/resample.py -> build/lib/fsl/utils/image copying fsl/utils/image/__init__.py -> build/lib/fsl/utils/image creating build/lib/fsl/utils/filetree copying fsl/utils/filetree/utils.py -> build/lib/fsl/utils/filetree copying fsl/utils/filetree/query.py -> build/lib/fsl/utils/filetree copying fsl/utils/filetree/parse.py -> build/lib/fsl/utils/filetree copying fsl/utils/filetree/filetree.py -> build/lib/fsl/utils/filetree copying fsl/utils/filetree/__init__.py -> build/lib/fsl/utils/filetree creating build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/vbm.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/topup.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/tbss.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/gfeat.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/fsl_anat.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/freesurfer.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/feat_stats.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/feat_reg.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/feat.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/fast.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/epi_reg.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/eddy.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/dti.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/bids_raw.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/bet.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/ProbtrackX.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/HCP_directory.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/HCP_Surface.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/Diffusion.tree -> build/lib/fsl/utils/filetree/trees copying fsl/utils/filetree/trees/BedpostX.tree -> build/lib/fsl/utils/filetree/trees installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/fsl creating build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/__init__.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/atlases.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/bitmap.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/cifti.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/constants.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/dicom.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/dtifit.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/featanalysis.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/featdesign.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/featimage.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/fixlabels.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/freesurfer.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/gifti.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/image.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/imagewrapper.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/melodicanalysis.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/melodicimage.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/mesh.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/mghimage.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/utils.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/vest.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/volumelabels.py -> build/bdist.linux-x86_64/wheel/fsl/data copying build/lib/fsl/data/vtk.py -> build/bdist.linux-x86_64/wheel/fsl/data creating build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/Text2Vest.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/Vest2Text.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/atlasq.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/fsl_abspath.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/fsl_apply_x5.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/fsl_convert_x5.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/fsl_ents.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/imcp.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/imglob.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/imln.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/immv.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/imrm.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/imtest.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/remove_ext.py -> build/bdist.linux-x86_64/wheel/fsl/scripts copying build/lib/fsl/scripts/resample_image.py -> build/bdist.linux-x86_64/wheel/fsl/scripts creating build/bdist.linux-x86_64/wheel/fsl/transform copying build/lib/fsl/transform/__init__.py -> build/bdist.linux-x86_64/wheel/fsl/transform copying build/lib/fsl/transform/affine.py -> build/bdist.linux-x86_64/wheel/fsl/transform copying build/lib/fsl/transform/flirt.py -> build/bdist.linux-x86_64/wheel/fsl/transform copying build/lib/fsl/transform/fnirt.py -> build/bdist.linux-x86_64/wheel/fsl/transform copying build/lib/fsl/transform/nonlinear.py -> build/bdist.linux-x86_64/wheel/fsl/transform copying build/lib/fsl/transform/x5.py -> build/bdist.linux-x86_64/wheel/fsl/transform creating build/bdist.linux-x86_64/wheel/fsl/utils creating build/bdist.linux-x86_64/wheel/fsl/utils/filetree creating build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/BedpostX.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/Diffusion.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/HCP_Surface.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/HCP_directory.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/ProbtrackX.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/bet.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/bids_raw.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/dti.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/eddy.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/epi_reg.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/fast.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/feat.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/feat_reg.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/feat_stats.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/freesurfer.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/fsl_anat.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/gfeat.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/tbss.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/topup.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/trees/vbm.tree -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree/trees copying build/lib/fsl/utils/filetree/__init__.py -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree copying build/lib/fsl/utils/filetree/filetree.py -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree copying build/lib/fsl/utils/filetree/parse.py -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree copying build/lib/fsl/utils/filetree/query.py -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree copying build/lib/fsl/utils/filetree/utils.py -> build/bdist.linux-x86_64/wheel/fsl/utils/filetree creating build/bdist.linux-x86_64/wheel/fsl/utils/image copying build/lib/fsl/utils/image/__init__.py -> build/bdist.linux-x86_64/wheel/fsl/utils/image copying build/lib/fsl/utils/image/resample.py -> build/bdist.linux-x86_64/wheel/fsl/utils/image copying build/lib/fsl/utils/image/roi.py -> build/bdist.linux-x86_64/wheel/fsl/utils/image copying build/lib/fsl/utils/__init__.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/assertions.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/bids.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/cache.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/deprecated.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/ensure.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/fslsub.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/idle.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/imcp.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/memoize.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/meta.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/naninfrange.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/notifier.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/parse_data.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/path.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/platform.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/run.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/settings.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/tempdir.py -> build/bdist.linux-x86_64/wheel/fsl/utils copying build/lib/fsl/utils/weakfuncref.py -> build/bdist.linux-x86_64/wheel/fsl/utils creating build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/tbss.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/__init__.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/avwutils.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/bedpostx.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/bet.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/bianca.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/dtifit.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/eddy.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/epi_reg.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/fast.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/feat.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/first.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/flirt.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/fnirt.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/fsl_anat.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/fsl_sub.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/fslmaths.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/fslstats.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/fugue.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/melodic.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/misc.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/oxford_asl.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/randomise.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/wrappers/wrapperutils.py -> build/bdist.linux-x86_64/wheel/fsl/wrappers copying build/lib/fsl/version.py -> build/bdist.linux-x86_64/wheel/fsl running install_egg_info running egg_info writing fslpy.egg-info/PKG-INFO writing dependency_links to fslpy.egg-info/dependency_links.txt writing entry points to fslpy.egg-info/entry_points.txt writing requirements to fslpy.egg-info/requires.txt writing top-level names to fslpy.egg-info/top_level.txt reading manifest file 'fslpy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'doc/html' adding license file 'LICENSE' writing manifest file 'fslpy.egg-info/SOURCES.txt' Copying fslpy.egg-info to build/bdist.linux-x86_64/wheel/fslpy-3.13.3-py3.12.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/fslpy-3.13.3.dist-info/WHEEL creating '/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir/pip-wheel-d79cd1az/.tmp-bu2psiml/fslpy-3.13.3-py2.py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'fsl/version.py' adding 'fsl/data/__init__.py' adding 'fsl/data/atlases.py' adding 'fsl/data/bitmap.py' adding 'fsl/data/cifti.py' adding 'fsl/data/constants.py' adding 'fsl/data/dicom.py' adding 'fsl/data/dtifit.py' adding 'fsl/data/featanalysis.py' adding 'fsl/data/featdesign.py' adding 'fsl/data/featimage.py' adding 'fsl/data/fixlabels.py' adding 'fsl/data/freesurfer.py' adding 'fsl/data/gifti.py' adding 'fsl/data/image.py' adding 'fsl/data/imagewrapper.py' adding 'fsl/data/melodicanalysis.py' adding 'fsl/data/melodicimage.py' adding 'fsl/data/mesh.py' adding 'fsl/data/mghimage.py' adding 'fsl/data/utils.py' adding 'fsl/data/vest.py' adding 'fsl/data/volumelabels.py' adding 'fsl/data/vtk.py' adding 'fsl/scripts/Text2Vest.py' adding 'fsl/scripts/Vest2Text.py' adding 'fsl/scripts/atlasq.py' adding 'fsl/scripts/fsl_abspath.py' adding 'fsl/scripts/fsl_apply_x5.py' adding 'fsl/scripts/fsl_convert_x5.py' adding 'fsl/scripts/fsl_ents.py' adding 'fsl/scripts/imcp.py' adding 'fsl/scripts/imglob.py' adding 'fsl/scripts/imln.py' adding 'fsl/scripts/immv.py' adding 'fsl/scripts/imrm.py' adding 'fsl/scripts/imtest.py' adding 'fsl/scripts/remove_ext.py' adding 'fsl/scripts/resample_image.py' adding 'fsl/transform/__init__.py' adding 'fsl/transform/affine.py' adding 'fsl/transform/flirt.py' adding 'fsl/transform/fnirt.py' adding 'fsl/transform/nonlinear.py' adding 'fsl/transform/x5.py' adding 'fsl/utils/__init__.py' adding 'fsl/utils/assertions.py' adding 'fsl/utils/bids.py' adding 'fsl/utils/cache.py' adding 'fsl/utils/deprecated.py' adding 'fsl/utils/ensure.py' adding 'fsl/utils/fslsub.py' adding 'fsl/utils/idle.py' adding 'fsl/utils/imcp.py' adding 'fsl/utils/memoize.py' adding 'fsl/utils/meta.py' adding 'fsl/utils/naninfrange.py' adding 'fsl/utils/notifier.py' adding 'fsl/utils/parse_data.py' adding 'fsl/utils/path.py' adding 'fsl/utils/platform.py' adding 'fsl/utils/run.py' adding 'fsl/utils/settings.py' adding 'fsl/utils/tempdir.py' adding 'fsl/utils/weakfuncref.py' adding 'fsl/utils/filetree/__init__.py' adding 'fsl/utils/filetree/filetree.py' adding 'fsl/utils/filetree/parse.py' adding 'fsl/utils/filetree/query.py' adding 'fsl/utils/filetree/utils.py' adding 'fsl/utils/filetree/trees/BedpostX.tree' adding 'fsl/utils/filetree/trees/Diffusion.tree' adding 'fsl/utils/filetree/trees/HCP_Surface.tree' adding 'fsl/utils/filetree/trees/HCP_directory.tree' adding 'fsl/utils/filetree/trees/ProbtrackX.tree' adding 'fsl/utils/filetree/trees/bet.tree' adding 'fsl/utils/filetree/trees/bids_raw.tree' adding 'fsl/utils/filetree/trees/dti.tree' adding 'fsl/utils/filetree/trees/eddy.tree' adding 'fsl/utils/filetree/trees/epi_reg.tree' adding 'fsl/utils/filetree/trees/fast.tree' adding 'fsl/utils/filetree/trees/feat.tree' adding 'fsl/utils/filetree/trees/feat_reg.tree' adding 'fsl/utils/filetree/trees/feat_stats.tree' adding 'fsl/utils/filetree/trees/freesurfer.tree' adding 'fsl/utils/filetree/trees/fsl_anat.tree' adding 'fsl/utils/filetree/trees/gfeat.tree' adding 'fsl/utils/filetree/trees/tbss.tree' adding 'fsl/utils/filetree/trees/topup.tree' adding 'fsl/utils/filetree/trees/vbm.tree' adding 'fsl/utils/image/__init__.py' adding 'fsl/utils/image/resample.py' adding 'fsl/utils/image/roi.py' adding 'fsl/wrappers/__init__.py' adding 'fsl/wrappers/avwutils.py' adding 'fsl/wrappers/bedpostx.py' adding 'fsl/wrappers/bet.py' adding 'fsl/wrappers/bianca.py' adding 'fsl/wrappers/dtifit.py' adding 'fsl/wrappers/eddy.py' adding 'fsl/wrappers/epi_reg.py' adding 'fsl/wrappers/fast.py' adding 'fsl/wrappers/feat.py' adding 'fsl/wrappers/first.py' adding 'fsl/wrappers/flirt.py' adding 'fsl/wrappers/fnirt.py' adding 'fsl/wrappers/fsl_anat.py' adding 'fsl/wrappers/fsl_sub.py' adding 'fsl/wrappers/fslmaths.py' adding 'fsl/wrappers/fslstats.py' adding 'fsl/wrappers/fugue.py' adding 'fsl/wrappers/melodic.py' adding 'fsl/wrappers/misc.py' adding 'fsl/wrappers/oxford_asl.py' adding 'fsl/wrappers/randomise.py' adding 'fsl/wrappers/tbss.py' adding 'fsl/wrappers/wrapperutils.py' adding 'fslpy-3.13.3.dist-info/LICENSE' adding 'fslpy-3.13.3.dist-info/METADATA' adding 'fslpy-3.13.3.dist-info/WHEEL' adding 'fslpy-3.13.3.dist-info/entry_points.txt' adding 'fslpy-3.13.3.dist-info/top_level.txt' adding 'fslpy-3.13.3.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for fslpy (pyproject.toml): finished with status 'done' Created wheel for fslpy: filename=fslpy-3.13.3-py2.py3-none-any.whl size=292134 sha256=613f5d50dfcf042ac68766beecdf04ecda683dfa569e79f91d6a839f1d0bb4df Stored in directory: /builddir/.cache/pip/wheels/9f/1e/5c/b319d90c615c6215574262e36bbdbe9a584bffc9dd8273366b Successfully built fslpy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.lnG8Is + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 ++ dirname /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd fslpy-3.13.3 ++ ls /builddir/build/BUILD/fslpy-3.13.3/pyproject-wheeldir/fslpy-3.13.3-py2.py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=fslpy==3.13.3 + TMPDIR=/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/fslpy-3.13.3/pyproject-wheeldir fslpy==3.13.3 Using pip 23.2.1 from /usr/lib/python3.12/site-packages/pip (python 3.12) Looking in links: /builddir/build/BUILD/fslpy-3.13.3/pyproject-wheeldir Processing ./pyproject-wheeldir/fslpy-3.13.3-py2.py3-none-any.whl Installing collected packages: fslpy Creating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/Text2Vest to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/Vest2Text to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/atlasq to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/atlasquery to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_abspath to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_apply_x5 to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_convert_x5 to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_ents to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imcp to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imglob to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imln to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/immv to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imrm to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imtest to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/remove_ext to 755 changing mode of /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/resample_image to 755 Successfully installed fslpy-3.13.3 + '[' -d /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/Text2Vest /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/Vest2Text /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/atlasq /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/atlasquery /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_abspath /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_apply_x5 /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_convert_x5 /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_ents /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imcp /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imglob /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imln /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/immv /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imrm /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imtest /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/remove_ext /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/resample_image /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/Text2Vest: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/Vest2Text: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/atlasq: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/atlasquery: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_abspath: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_apply_x5: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_convert_x5: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/fsl_ents: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imcp: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imglob: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imln: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/immv: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imrm: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/imtest: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/remove_ext: updating /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/resample_image: updating + rm -rfv /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages ']' + site_dirs+=("/usr/lib/python3.12/site-packages") + '[' /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib64/python3.12/site-packages '!=' /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib64/python3.12/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.12/site-packages/fslpy-3.13.3.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages/fslpy-3.13.3.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 --record /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages/fslpy-3.13.3.dist-info/RECORD --output /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages/fslpy-3.13.3.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages/fslpy-3.13.3.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages/fslpy-3.13.3.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages/fslpy-3.13.3.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_PERCENTAGES_COUNT=2 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 --sitelib /usr/lib/python3.12/site-packages --sitearch /usr/lib64/python3.12/site-packages --python-version 3.12 --pyproject-record /builddir/build/BUILD/python-fslpy-3.13.3-1.fc40.x86_64-pyproject-record --prefix /usr fsl + rm -rfv /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/tests/ + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for atlasq' Generating man page for atlasq + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=atlasq '--version-string=atlasq 3.13.3' --output=atlasq.1 atlasq + cat atlasq.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH ATLASQ "1" "July 2023" "atlasq 3.13.3" "User Commands" .SH NAME atlasq \- atlasq .SH DESCRIPTION FSL atlasq 3.13.3 .PP usage: atlasq [\-h] command [options] .SS "options:" .TP \fB\-h\fR, \fB\-\-help\fR show this help message and exit .SS "Commands:" .IP {ohi,list,summary,query} .TP ohi Emulate the FSL atlasquery tool .TP list List available atlases .TP summary Print a summary of one atlas .TP query Query an atlas at specific coordinates + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D atlasq.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for atlasquery' Generating man page for atlasquery + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=atlasquery '--version-string=atlasquery 3.13.3' --output=atlasquery.1 atlasquery + cat atlasquery.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH ATLASQUERY "1" "July 2023" "atlasquery 3.13.3" "User Commands" .SH NAME atlasquery \- atlasquery .SH DESCRIPTION FSL atlasq 3.13.3 .PP usage: atlasq ohi \fB\-h\fR .IP atlasq ohi \fB\-\-dumpatlases\fR atlasq ohi \fB\-a\fR atlas \fB\-c\fR X,Y,Z atlasq ohi \fB\-a\fR atlas \fB\-m\fR mask .SS "options:" .TP \fB\-h\fR, \fB\-\-help\fR show this help message and exit .TP \fB\-a\fR ATLAS, \fB\-\-atlas\fR ATLAS Name of atlas to use .TP \fB\-V\fR, \fB\-\-verbose\fR Switch on diagnostic messages .TP \fB\-m\fR MASK, \fB\-\-mask\fR MASK A mask image to use during structural lookups .TP \fB\-c\fR COORD, \fB\-\-coord\fR COORD Coordinate to query .TP \fB\-\-dumpatlases\fR Dump a list of the available atlases + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D atlasquery.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for fsl_apply_x5' Generating man page for fsl_apply_x5 + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=fsl_apply_x5 '--version-string=fsl_apply_x5 3.13.3' --output=fsl_apply_x5.1 fsl_apply_x5 + cat fsl_apply_x5.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH FSL_APPLY_X5 "1" "July 2023" "fsl_apply_x5 3.13.3" "User Commands" .SH NAME fsl_apply_x5 \- fsl_apply_x5 .SH DESCRIPTION Warning: this version of fsl_apply_x5 is a development release. Interface, behaviour, and input/output formats of future versions may differ substantially from this version. .PP usage: fsl_apply_x5 [\-h] [\-i {nearest,linear,cubic}] [\-r REF] .IP input xform output .SS "positional arguments:" .TP input Input image .TP xform X5 transformation file .TP output Output image .SS "options:" .TP \fB\-h\fR, \fB\-\-help\fR show this help message and exit .TP \fB\-i\fR {nearest,linear,cubic}, \fB\-\-interp\fR {nearest,linear,cubic} Interpolation (default: linear) .TP \fB\-r\fR REF, \fB\-\-ref\fR REF Alternate reference image (default: reference specified in X5 file) + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D fsl_apply_x5.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for fsl_ents' Generating man page for fsl_ents + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=fsl_ents '--version-string=fsl_ents 3.13.3' --output=fsl_ents.1 fsl_ents + cat fsl_ents.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH FSL_ENTS "1" "July 2023" "fsl_ents 3.13.3" "User Commands" .SH NAME fsl_ents \- fsl_ents .SH DESCRIPTION usage: fsl_ents: Extract component time series from a MELODIC .ica directory Usage: .IP fsl_ents <.ica directory> [\-o outfile] fsl_ents <.ica directory> [\-o outfile] [ ...] fsl_ents <.ica directory> [\-o outfile] [\-c conffile] [\-c conffile] fsl_ents <.ica directory> [\-o outfile] [\-c conffile] [\-c conffile] [ ...] .PP Extract component time series from a MELODIC .ica directory .SS "positional arguments:" .TP icadir \&.ica directory to extract time series from. .TP components Component number or FIX/AROMA file specifying components to extract. .SS "options:" .TP \fB\-h\fR, \fB\-\-help\fR show this help message and exit .TP \fB\-o\fR OUTFILE, \fB\-\-outfile\fR OUTFILE File to save time series to .TP \fB\-ow\fR, \fB\-\-overwrite\fR Overwrite output file if it exists .TP \fB\-c\fR CONFFILE, \fB\-\-conffile\fR CONFFILE Extra files to append to output file. + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D fsl_ents.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for fsl_convert_x5' Generating man page for fsl_convert_x5 + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=fsl_convert_x5 '--version-string=fsl_convert_x5 3.13.3' --output=fsl_convert_x5.1 fsl_convert_x5 + cat fsl_convert_x5.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH FSL_CONVERT_X5 "1" "July 2023" "fsl_convert_x5 3.13.3" "User Commands" .SH NAME fsl_convert_x5 \- fsl_convert_x5 .SH DESCRIPTION Warning: this version of fsl_convert_x5 is a development release. Interface, behaviour, and input/output formats of future versions may differ substantially from this version. .PP usage: fsl_convert_x5 [\-h] {flirt,fnirt} ... .SS "positional arguments:" .IP {flirt,fnirt} .SS "options:" .TP \fB\-h\fR, \fB\-\-help\fR show this help message and exit + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D fsl_convert_x5.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for imcp' Generating man page for imcp + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=imcp '--version-string=imcp 3.13.3' --output=imcp.1 imcp + cat imcp.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH IMCP "1" "July 2023" "imcp 3.13.3" "User Commands" .SH NAME imcp \- imcp .SH DESCRIPTION .SS "Usage:" .IP imcp imcp imcp ... .PP Copy images from to , or copy all s to .PP NB: filenames can be basenames or include an extension. .PP Recognised file extensions: .nii.gz, .nii, .img, .hdr, .img.gz, .hdr.gz + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D imcp.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for immv' Generating man page for immv + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=immv '--version-string=immv 3.13.3' --output=immv.1 immv + cat immv.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH IMMV "1" "July 2023" "immv 3.13.3" "User Commands" .SH NAME immv \- immv .SH DESCRIPTION .SS "Usage:" .IP immv immv immv ... .PP Moves images from to , or move all s to .PP NB: filenames can be basenames or include an extension. .PP Recognised file extensions: .nii.gz, .nii, .img, .hdr, .img.gz, .hdr.gz + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D immv.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for resample_image' Generating man page for resample_image + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=resample_image '--version-string=resample_image 3.13.3' --output=resample_image.1 resample_image + cat resample_image.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH RESAMPLE_IMAGE "1" "July 2023" "resample_image 3.13.3" "User Commands" .SH NAME resample_image \- resample_image .SH DESCRIPTION usage: resample_image (\fB\-\-shape\fR|\-\-dim|\-\-reference) [options] input output .PP Resample an image to different dimensions. .SS "positional arguments:" .TP input Input image .TP output Output image .SS "options:" .TP \fB\-h\fR, \fB\-\-help\fR show this help message and exit .TP \fB\-i\fR {nearest,linear,cubic}, \fB\-\-interp\fR {nearest,linear,cubic} Interpolation (default: linear) .TP \fB\-o\fR {centre,corner}, \fB\-\-origin\fR {centre,corner} Resampling origin (default: centre) .TP \fB\-dt\fR {char,short,int,float,double}, \fB\-\-dtype\fR {char,short,int,float,double} Data type (default: data type of input image) .TP \fB\-n\fR, \fB\-\-nosmooth\fR Do not smooth image when downsampling .SS "Resampling destination:" .IP Specify the resampling destination space using one of the following options. Note that the \fB\-\-reference\fR option will cause the field\-of\-view of the input image to be changed to that of the reference image. .TP \fB\-s\fR X,Y,Z,..., \fB\-\-shape\fR X,Y,Z,... Output shape .TP \fB\-d\fR X,Y,Z,..., \fB\-\-dim\fR X,Y,Z,... Output voxel dimensions .TP \fB\-r\fR IMAGE, \fB\-\-reference\fR IMAGE Resample input to the space of this reference image(overrides \fB\-\-origin\fR) + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D resample_image.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for Text2Vest' Generating man page for Text2Vest + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=Text2Vest '--version-string=Text2Vest 3.13.3' --output=Text2Vest.1 Text2Vest + cat Text2Vest.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH TEXT2VEST "1" "July 2023" "Text2Vest 3.13.3" "User Commands" .SH NAME Text2Vest \- Text2Vest .SH SYNOPSIS .B Text2Vest \fI\, \/\fR .SH DESCRIPTION + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D Text2Vest.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for Vest2Text' Generating man page for Vest2Text + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=Vest2Text '--version-string=Vest2Text 3.13.3' --output=Vest2Text.1 Vest2Text + cat Vest2Text.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH VEST2TEXT "1" "July 2023" "Vest2Text 3.13.3" "User Commands" .SH NAME Vest2Text \- Vest2Text .SH SYNOPSIS .B Vest2Text \fI\, \/\fR .SH DESCRIPTION + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D Vest2Text.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for fsl_abspath' Generating man page for fsl_abspath + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=fsl_abspath '--version-string=fsl_abspath 3.13.3' --output=fsl_abspath.1 fsl_abspath + cat fsl_abspath.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH FSL_ABSPATH "1" "July 2023" "fsl_abspath 3.13.3" "User Commands" .SH NAME fsl_abspath \- fsl_abspath .SH DESCRIPTION \fI\,/builddir/build/BUILD/fslpy\-3.13\/\fP.3/\-\-help + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D fsl_abspath.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for imln' Generating man page for imln + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=imln '--version-string=imln 3.13.3' --output=imln.1 imln + cat imln.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH IMLN "1" "July 2023" "imln 3.13.3" "User Commands" .SH NAME imln \- imln .SH SYNOPSIS .B imln \fI\, \/\fR .SH DESCRIPTION .IP Makes a link (called file2) to file1 NB: filenames can be basenames or include an extension + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D imln.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for imtest' Generating man page for imtest + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=imtest '--version-string=imtest 3.13.3' --output=imtest.1 imtest + cat imtest.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH IMTEST "1" "July 2023" "imtest 3.13.3" "User Commands" .SH NAME imtest \- imtest .SH DESCRIPTION 0 + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D imtest.1 + for binary in "atlasq" "atlasquery" "fsl_apply_x5" "fsl_ents" "fsl_convert_x5" "imcp" "immv" "resample_image" "Text2Vest" "Vest2Text" "fsl_abspath" "imln" "imtest" "remove_ext" + echo 'Generating man page for remove_ext' Generating man page for remove_ext + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man --no-info --no-discard-stderr --name=remove_ext '--version-string=remove_ext 3.13.3' --output=remove_ext.1 remove_ext + cat remove_ext.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH REMOVE_EXT "1" "July 2023" "remove_ext 3.13.3" "User Commands" .SH NAME remove_ext \- remove_ext .SH DESCRIPTION \fB\-\-help\fR + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D remove_ext.1 + for binary in "imglob" "imrm" + echo 'Generating man page for imglob' Generating man page for imglob + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man '--help-option= ' --no-info --no-discard-stderr --name=imglob '--version-string=imglob 3.13.3' --output=imglob.1 imglob + cat imglob.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH IMGLOB "1" "July 2023" "imglob 3.13.3" "User Commands" .SH NAME imglob \- imglob .SH SYNOPSIS .B imglob [\fI\,-extension/extensions\/\fR] \fI\,\/\fR .SH DESCRIPTION .HP \fB\-extension\fR for one image with full extension .HP \fB\-extensions\fR for image list with full extensions + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D imglob.1 + for binary in "imglob" "imrm" + echo 'Generating man page for imrm' Generating man page for imrm + PYTHONPATH=:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/lib/python3.12/site-packages/ + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64//usr/bin/ + help2man '--help-option= ' --no-info --no-discard-stderr --name=imrm '--version-string=imrm 3.13.3' --output=imrm.1 imrm + cat imrm.1 .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. .TH IMRM "1" "July 2023" "imrm 3.13.3" "User Commands" .SH NAME imrm \- imrm .SH SYNOPSIS .B imrm \fI\,\/\fR .SH DESCRIPTION NB: filenames can be basenames or not + install -t /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/man/man1 -p -m 0644 -D imrm.1 + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 3.13.3-1.fc40 --unique-debug-suffix -3.13.3-1.fc40.x86_64 --unique-debug-src-base python-fslpy-3.13.3-1.fc40.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/fslpy-3.13.3 find-debuginfo: starting Extracting debug info from 0 files Creating .debug symlinks for symlinks to ELF files find: 'debug': No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.xDahmk + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd fslpy-3.13.3 + k='not longtest and not test_submit' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly and not test_fileOrImage_all_tempfiles_cleared' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly and not test_fileOrImage_all_tempfiles_cleared and not test_atlas' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly and not test_fileOrImage_all_tempfiles_cleared and not test_atlas and not test_read_nifti' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly and not test_fileOrImage_all_tempfiles_cleared and not test_atlas and not test_read_nifti and not test_VoxelwiseEVs' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly and not test_fileOrImage_all_tempfiles_cleared and not test_atlas and not test_read_nifti and not test_VoxelwiseEVs and not test_imcp_shouldPass' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly and not test_fileOrImage_all_tempfiles_cleared and not test_atlas and not test_read_nifti and not test_VoxelwiseEVs and not test_imcp_shouldPass and not test_immv_shouldPass' + k='not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly and not test_fileOrImage_all_tempfiles_cleared and not test_atlas and not test_read_nifti and not test_VoxelwiseEVs and not test_imcp_shouldPass and not test_immv_shouldPass and not test_fileOrThing_chained_outprefix' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/fslpy-3.13.3/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=2 + /usr/bin/pytest tests -k 'not longtest and not test_submit and not test_FEATFSFDesign_firstLevelVoxelwiseEV and not test_compressed_voxelwise_ev and not test_image_readonly_compressed and not test_runfunc and not test_fslmaths_load and not test_fileOrImage and not test_fileOrThing_outprefix and not test_fileOrThing_outprefix_pathlib and not test_fileOrThing_outprefix_differentTypes and not test_fileOrThing_outprefix_directory and not test_chained_fileOrImageAndArray and not test_fileOrThing_submit_cmdonly and not test_fileOrImage_all_tempfiles_cleared and not test_atlas and not test_read_nifti and not test_VoxelwiseEVs and not test_imcp_shouldPass and not test_immv_shouldPass and not test_fileOrThing_chained_outprefix' --ignore=tests/test_idle.py --ignore=tests/test_platform.py --ignore=tests/test_atlases.py --ignore=tests/test_atlases_query.py --ignore=tests/test_scripts/test_atlasq_list_summary.py --ignore=tests/test_scripts/test_atlasq_ohi.py --ignore=tests/test_scripts/test_atlasq_query.py --ignore=tests/test_dicom.py --ignore=tests/test_scripts/test_fsl_apply_x5.py --ignore=tests/test_scripts/test_fsl_convert_x5.py --ignore=tests/test_scripts/test_immv_imcp.py ============================= test session starts ============================== platform linux -- Python 3.12.0rc1, pytest-7.3.2, pluggy-1.2.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/fslpy-3.13.3 configfile: setup.cfg plugins: cov-4.0.0 collecting ... collected 541 items / 20 deselected / 521 selected tests/test_assertions.py::testdir PASSED [ 0%] tests/test_assertions.py::test_assertFileExists PASSED [ 0%] tests/test_assertions.py::test_assertIsNifti3D PASSED [ 0%] tests/test_assertions.py::test_assertIsNifti4D PASSED [ 0%] tests/test_assertions.py::test_assertIsNifti PASSED [ 0%] tests/test_assertions.py::test_assertNiftiShape PASSED [ 1%] tests/test_assertions.py::test_assertIsSurfGifti PASSED [ 1%] tests/test_assertions.py::test_assertIsFuncGifti PASSED [ 1%] tests/test_assertions.py::test_assertIsMelodicDir PASSED [ 1%] tests/test_assertions.py::test_disabled PASSED [ 1%] tests/test_bids.py::test_parseFilename PASSED [ 2%] tests/test_bids.py::test_isBIDSDir PASSED [ 2%] tests/test_bids.py::test_inBIDSDir PASSED [ 2%] tests/test_bids.py::test_isBIDSFile PASSED [ 2%] tests/test_bids.py::test_loadMetadata PASSED [ 2%] tests/test_bids.py::test_loadMetadata_control_characters PASSED [ 3%] tests/test_bids.py::test_loadMetadata_symlinked PASSED [ 3%] tests/test_bitmap.py::test_bitmap PASSED [ 3%] tests/test_bitmap.py::test_bitmap_asImage PASSED [ 3%] tests/test_cache.py::test_dropOldest PASSED [ 3%] tests/test_cache.py::test_clear PASSED [ 4%] tests/test_cache.py::test_getitem_setitem PASSED [ 4%] tests/test_cache.py::test_getdefault PASSED [ 4%] tests/test_cache.py::test_expiry PASSED [ 4%] tests/test_cache.py::test_lru PASSED [ 4%] tests/test_cache.py::test_accessors PASSED [ 4%] tests/test_cifti.py::test_read_gifti PASSED [ 5%] tests/test_cifti.py::test_io_cifti PASSED [ 5%] tests/test_cifti.py::test_extract_dense PASSED [ 5%] tests/test_cifti.py::test_extract_parcel PASSED [ 5%] tests/test_cifti.py::test_brainstructure PASSED [ 5%] tests/test_deprecated.py::test_warn PASSED [ 6%] tests/test_deprecated.py::test_deprecated PASSED [ 6%] tests/test_dtifit.py::test_getDTIFitDataPrefix_and_isDTIFitPath PASSED [ 6%] tests/test_dtifit.py::test_looksLikeTensorImage PASSED [ 6%] tests/test_dtifit.py::test_decomposeTensorMatrix PASSED [ 6%] tests/test_dtifit.py::test_DTIFitTensor PASSED [ 7%] tests/test_ensure.py::test_ensureIsImage PASSED [ 7%] tests/test_featanalysis.py::test_isFEATImage PASSED [ 7%] tests/test_featanalysis.py::test_isFEATDir PASSED [ 7%] tests/test_featanalysis.py::test_hasStats PASSED [ 7%] tests/test_featanalysis.py::test_hasMelodicDir PASSED [ 8%] tests/test_featanalysis.py::test_getAnalysisDir PASSED [ 8%] tests/test_featanalysis.py::test_getTopLevelAnalysisDir PASSED [ 8%] tests/test_featanalysis.py::test_getReportFile PASSED [ 8%] tests/test_featanalysis.py::test_loadContrasts PASSED [ 8%] tests/test_featanalysis.py::test_loadSettings PASSED [ 9%] tests/test_featanalysis.py::test_loadDesign PASSED [ 9%] tests/test_featanalysis.py::test_getThresholds PASSED [ 9%] tests/test_featanalysis.py::test_isFirstLevelAnalysis PASSED [ 9%] tests/test_featanalysis.py::test_loadClusterResults PASSED [ 9%] tests/test_featanalysis.py::test_getDataFile PASSED [ 9%] tests/test_featanalysis.py::test_getMelodicFile PASSED [ 10%] tests/test_featanalysis.py::test_getResidualFile PASSED [ 10%] tests/test_featanalysis.py::test_getPEFile PASSED [ 10%] tests/test_featanalysis.py::test_getCOPEFile PASSED [ 10%] tests/test_featanalysis.py::test_getZStatFile PASSED [ 10%] tests/test_featanalysis.py::test_getClusterMaskFile PASSED [ 11%] tests/test_featdesign.py::test_FEATFSFDesign PASSED [ 11%] tests/test_featdesign.py::test_getFirstLevelEVs_1 PASSED [ 11%] tests/test_featdesign.py::test_getFirstLevelEVs_2 PASSED [ 11%] tests/test_featdesign.py::test_getFirstLevelEVs_3 PASSED [ 11%] tests/test_featdesign.py::test_getFirstLevelEVs_realdata PASSED [ 12%] tests/test_featdesign.py::test_getHigherLevelEVs_1 PASSED [ 12%] tests/test_featdesign.py::test_getHigherLevelEVs_2 PASSED [ 12%] tests/test_featdesign.py::test_loadDesignMat PASSED [ 12%] tests/test_featimage.py::test_FEATImage_attributes PASSED [ 12%] tests/test_featimage.py::test_FEATImage_imageAccessors PASSED [ 13%] tests/test_featimage.py::test_FEATImage_nostats PASSED [ 13%] tests/test_featimage.py::test_FEATImage_fit_firstLevel PASSED [ 13%] tests/test_featimage.py::test_FEATImage_fit_higherLevel PASSED [ 13%] tests/test_featimage.py::test_FEATImage_partialFit PASSED [ 13%] tests/test_featimage.py::test_modelFit PASSED [ 14%] tests/test_fixlabels.py::test_loadLabelFile_good PASSED [ 14%] tests/test_fixlabels.py::test_loadLabelFile_bad PASSED [ 14%] tests/test_fixlabels.py::test_loadLabelFile_customLabels PASSED [ 14%] tests/test_fixlabels.py::test_saveLabelFile PASSED [ 14%] tests/test_freesurfer.py::test_FreesurferMesh_create PASSED [ 14%] tests/test_freesurfer.py::test_FreesurferMesh_create_loadall PASSED [ 15%] tests/test_freesurfer.py::test_loadVertices PASSED [ 15%] tests/test_freesurfer.py::test_loadVertexData_morph PASSED [ 15%] tests/test_freesurfer.py::test_loadVertexData_label PASSED [ 15%] tests/test_freesurfer.py::test_loadVertexData_mgh PASSED [ 15%] tests/test_freesurfer.py::test_loadVertexData_annot PASSED [ 16%] tests/test_freesurfer.py::test_relatedGeometryFiles PASSED [ 16%] tests/test_freesurfer.py::test_relatedVertexDataFiles PASSED [ 16%] tests/test_freesurfer.py::test_findReferenceImage PASSED [ 16%] tests/test_fsl_data_utils.py::test_guessType PASSED [ 16%] tests/test_fsl_data_utils.py::test_makeWriteable PASSED [ 17%] tests/test_fsl_utils_path.py::testdir PASSED [ 17%] tests/test_fsl_utils_path.py::test_deepest PASSED [ 17%] tests/test_fsl_utils_path.py::test_shallowest PASSED [ 17%] tests/test_fsl_utils_path.py::test_allFiles PASSED [ 17%] tests/test_fsl_utils_path.py::test_hasExt PASSED [ 18%] tests/test_fsl_utils_path.py::test_addExt_imageFiles_mustExist_shouldPass PASSED [ 18%] tests/test_fsl_utils_path.py::test_addExt_otherFiles_mustExist_shouldPass PASSED [ 18%] tests/test_fsl_utils_path.py::test_addExt_imageFiles_mustExist_shouldFail PASSED [ 18%] tests/test_fsl_utils_path.py::test_addExt_otherFiles_mustExist_shouldFail PASSED [ 18%] tests/test_fsl_utils_path.py::test_addExt_noExist PASSED [ 19%] tests/test_fsl_utils_path.py::test_addExt_unambiguous PASSED [ 19%] tests/test_fsl_utils_path.py::test_removeExt PASSED [ 19%] tests/test_fsl_utils_path.py::test_getExt PASSED [ 19%] tests/test_fsl_utils_path.py::test_splitExt PASSED [ 19%] tests/test_fsl_utils_path.py::test_getFileGroup_imageFiles_shouldPass PASSED [ 19%] tests/test_fsl_utils_path.py::test_getFileGroup_otherFiles_shouldPass PASSED [ 20%] tests/test_fsl_utils_path.py::test_getFileGroup_shouldFail PASSED [ 20%] tests/test_fsl_utils_path.py::test_removeDuplicates_imageFiles_shouldPass PASSED [ 20%] tests/test_fsl_utils_path.py::test_removeDuplicates_otherFiles_shouldPass PASSED [ 20%] tests/test_fsl_utils_path.py::test_removeDuplicates_shouldFail PASSED [ 20%] tests/test_fsl_utils_path.py::test_uniquePrefix PASSED [ 21%] tests/test_fsl_utils_path.py::test_commonBase PASSED [ 21%] tests/test_fsl_utils_path.py::test_wslpath PASSED [ 21%] tests/test_fsl_utils_path.py::test_winpath PASSED [ 21%] tests/test_fslsub.py::test_flatten_jobids PASSED [ 21%] tests/test_fslsub.py::test_info PASSED [ 22%] tests/test_fslsub.py::test_add_to_parser PASSED [ 22%] tests/test_fslsub.py::test_func_to_cmd PASSED [ 22%] tests/test_gifti.py::test_GiftiMesh_create PASSED [ 22%] tests/test_gifti.py::test_GiftiMesh_create_loadAll PASSED [ 22%] tests/test_gifti.py::test_loadGiftiMesh PASSED [ 23%] tests/test_gifti.py::test_loadVertices PASSED [ 23%] tests/test_gifti.py::test_GiftiMesh_loadVertexData PASSED [ 23%] tests/test_gifti.py::test_loadGiftiVertexData PASSED [ 23%] tests/test_gifti.py::test_relatedFiles_hcp PASSED [ 23%] tests/test_gifti.py::test_relatedFiles_bids PASSED [ 23%] tests/test_gifti.py::test_GiftiMesh_surface_and_data PASSED [ 24%] tests/test_gifti.py::test_GiftiMesh_multiple_vertices PASSED [ 24%] tests/test_gifti.py::test_GiftiMesh_needsFixing PASSED [ 24%] tests/test_gifti.py::test_loadGiftiMesh_onetriangle PASSED [ 24%] tests/test_image.py::test_load PASSED [ 24%] tests/test_image.py::test_load_from_symlink PASSED [ 25%] tests/test_image.py::test_create PASSED [ 25%] tests/test_image.py::test_name_dataSource PASSED [ 25%] tests/test_image.py::test_bad_create PASSED [ 25%] tests/test_image.py::test_Image_atts_analyze PASSED [ 25%] tests/test_image.py::test_Image_atts_nifti1 PASSED [ 26%] tests/test_image.py::test_Image_atts_nifti2 PASSED [ 26%] tests/test_image.py::test_Image_atts2_analyze PASSED [ 26%] tests/test_image.py::test_Image_atts2_nifti1 PASSED [ 26%] tests/test_image.py::test_Image_atts2_nifti2 PASSED [ 26%] tests/test_image.py::test_canonicalShape PASSED [ 27%] tests/test_image.py::test_looksLikeImage PASSED [ 27%] tests/test_image.py::test_addExt PASSED [ 27%] tests/test_image.py::test_removeExt PASSED [ 27%] tests/test_image.py::test_getExt PASSED [ 27%] tests/test_image.py::test_splitExt PASSED [ 28%] tests/test_image.py::test_defaultExt PASSED [ 28%] tests/test_image.py::test_defaultImageType PASSED [ 28%] tests/test_image.py::test_fixExt PASSED [ 28%] tests/test_image.py::test_Image_orientation_analyze_neuro PASSED [ 28%] tests/test_image.py::test_Image_orientation_analyze_radio PASSED [ 28%] tests/test_image.py::test_Image_orientation_nifti1_neuro PASSED [ 29%] tests/test_image.py::test_Image_orientation_nifti1_radio PASSED [ 29%] tests/test_image.py::test_Image_orientation_nifti2_neuro PASSED [ 29%] tests/test_image.py::test_Image_orientation_nifti2_radio PASSED [ 29%] tests/test_image.py::test_Image_sqforms_nifti1_normal PASSED [ 29%] tests/test_image.py::test_Image_sqforms_nifti1_nosform PASSED [ 30%] tests/test_image.py::test_Image_sqforms_nifti1_noqform PASSED [ 30%] tests/test_image.py::test_Image_sqforms_nifti1_nosqform PASSED [ 30%] tests/test_image.py::test_Image_sqforms_nifti2_normal PASSED [ 30%] tests/test_image.py::test_Image_sqforms_nifti2_nosform PASSED [ 30%] tests/test_image.py::test_Image_sqforms_nifti2_noqform PASSED [ 31%] tests/test_image.py::test_Image_sqforms_nifti2_nosqform PASSED [ 31%] tests/test_image.py::test_Image_changeXform_analyze PASSED [ 31%] tests/test_image.py::test_Image_changeXform_nifti1 PASSED [ 31%] tests/test_image.py::test_Image_changeXform_nifti1_nosqform PASSED [ 31%] tests/test_image.py::test_Image_changeXform_nifti2 PASSED [ 32%] tests/test_image.py::test_Image_changeIntent_analyze PASSED [ 32%] tests/test_image.py::test_Image_changeIntent_nifti1 PASSED [ 32%] tests/test_image.py::test_Image_changeIntent_nifti2 PASSED [ 32%] tests/test_image.py::test_Image_changeData_analyze PASSED [ 32%] tests/test_image.py::test_Image_changeData_nifti1 PASSED [ 33%] tests/test_image.py::test_Image_changeData_nifti2 PASSED [ 33%] tests/test_image.py::test_Image_2D_analyze PASSED [ 33%] tests/test_image.py::test_Image_2D_nifti1 PASSED [ 33%] tests/test_image.py::test_Image_2D_nifti2 PASSED [ 33%] tests/test_image.py::test_Image_5D_analyze PASSED [ 33%] tests/test_image.py::test_Image_5D_nifti1 PASSED [ 34%] tests/test_image.py::test_Image_5D_nifti2 PASSED [ 34%] tests/test_image.py::test_Image_voxToScaledVox_analyze PASSED [ 34%] tests/test_image.py::test_Image_voxToScaledVox_nifti1 PASSED [ 34%] tests/test_image.py::test_Image_voxToScaledVox_nifti2 PASSED [ 34%] tests/test_image.py::test_Image_sameSpace PASSED [ 35%] tests/test_image.py::test_Image_save_analyze PASSED [ 35%] tests/test_image.py::test_Image_save_nifti1 PASSED [ 35%] tests/test_image.py::test_Image_save_nifti2 PASSED [ 35%] tests/test_image.py::test_Image_init_xform_nifti1 PASSED [ 35%] tests/test_image.py::test_Image_init_xform_nifti2 PASSED [ 36%] tests/test_image.py::test_rgb_image PASSED [ 36%] tests/test_image.py::test_determineShape PASSED [ 36%] tests/test_image.py::test_determineAffine PASSED [ 36%] tests/test_image.py::test_generateAffines PASSED [ 36%] tests/test_image.py::test_identifyAffine PASSED [ 37%] tests/test_image.py::test_complex PASSED [ 37%] tests/test_image.py::test_loadMeta PASSED [ 37%] tests/test_image.py::test_loadMeta_nonBids PASSED [ 37%] tests/test_image.py::test_loadMeta_badJSON PASSED [ 37%] tests/test_image.py::test_loadMeta_control_characters PASSED [ 38%] tests/test_image.py::test_loadMetadata PASSED [ 38%] tests/test_image.py::test_adjust PASSED [ 38%] tests/test_image.py::test_strval PASSED [ 38%] tests/test_image_data_access.py::test_image_readonly_uncompressed PASSED [ 38%] tests/test_image_data_access.py::test_image_read_write_compressed PASSED [ 38%] tests/test_image_data_access.py::test_image_read_write_uncompressed PASSED [ 39%] tests/test_image_data_access.py::test_image_read_write_datamanager PASSED [ 39%] tests/test_image_data_access.py::test_Image_without_nibabel_object PASSED [ 39%] tests/test_image_data_access.py::test_3D_indexing PASSED [ 39%] tests/test_image_data_access.py::test_3D_4D_indexing PASSED [ 39%] tests/test_image_data_access.py::test_3D_len_one_indexing PASSED [ 40%] tests/test_image_data_access.py::test_2D_indexing PASSED [ 40%] tests/test_image_data_access.py::test_1D_indexing PASSED [ 40%] tests/test_image_data_access.py::test_4D_indexing PASSED [ 40%] tests/test_image_data_access.py::test_expectedShape PASSED [ 40%] tests/test_image_resample.py::test_resample PASSED [ 41%] tests/test_image_resample.py::test_resample_4d PASSED [ 41%] tests/test_image_resample.py::test_resample_origin PASSED [ 41%] tests/test_image_resample.py::test_resampleToPixdims PASSED [ 41%] tests/test_image_resample.py::test_resampleToReference1 PASSED [ 41%] tests/test_image_resample.py::test_resampleToReference2 PASSED [ 42%] tests/test_image_resample.py::test_resampleToReference3 PASSED [ 42%] tests/test_image_resample.py::test_resampleToReference4 PASSED [ 42%] tests/test_image_roi.py::test_roi PASSED [ 42%] tests/test_importall.py::test_importall PASSED [ 42%] tests/test_melodicanalysis.py::test_isMelodicImage PASSED [ 42%] tests/test_melodicanalysis.py::test_isMelodicDir PASSED [ 43%] tests/test_melodicanalysis.py::test_getAnalysisDir PASSED [ 43%] tests/test_melodicanalysis.py::test_getTopLevelAnalysisDir PASSED [ 43%] tests/test_melodicanalysis.py::test_getDataFile PASSED [ 43%] tests/test_melodicanalysis.py::test_getMeanFile PASSED [ 43%] tests/test_melodicanalysis.py::test_getICFile PASSED [ 44%] tests/test_melodicanalysis.py::test_getMixFile PASSED [ 44%] tests/test_melodicanalysis.py::test_getFTMixFile PASSED [ 44%] tests/test_melodicanalysis.py::test_getReportFile PASSED [ 44%] tests/test_melodicanalysis.py::test_getNumComponents PASSED [ 44%] tests/test_melodicanalysis.py::test_getComponentTimeSeries PASSED [ 45%] tests/test_melodicanalysis.py::test_getComponentPowerSpectra PASSED [ 45%] tests/test_melodicimage.py::test_MelodicImage_create PASSED [ 45%] tests/test_melodicimage.py::test_MelodicImage_atts PASSED [ 45%] tests/test_melodicimage.py::test_MelodicImage_componentData PASSED [ 45%] tests/test_melodicimage.py::test_MelodicImage_tr PASSED [ 46%] tests/test_memoize.py::test_memoize PASSED [ 46%] tests/test_memoize.py::test_memoize_create PASSED [ 46%] tests/test_memoize.py::test_memoize_invalidate PASSED [ 46%] tests/test_memoize.py::test_memoizeMD5 PASSED [ 46%] tests/test_memoize.py::test_skipUnchanged PASSED [ 47%] tests/test_memoize.py::test_Instanceify PASSED [ 47%] tests/test_mesh.py::test_mesh_create PASSED [ 47%] tests/test_mesh.py::test_mesh_addVertices PASSED [ 47%] tests/test_mesh.py::test_loadVertices PASSED [ 47%] tests/test_mesh.py::test_mesh_addVertexData PASSED [ 47%] tests/test_mesh.py::test_loadVertexData PASSED [ 48%] tests/test_mesh.py::test_normals PASSED [ 48%] tests/test_mesh.py::test_needsFixing PASSED [ 48%] tests/test_mesh.py::test_trimesh_no_trimesh PASSED [ 48%] tests/test_mesh.py::test_trimesh PASSED [ 48%] tests/test_mesh.py::test_rayIntersection PASSED [ 49%] tests/test_mesh.py::test_nearestVertex PASSED [ 49%] tests/test_mesh.py::test_planeIntersection PASSED [ 49%] tests/test_mesh.py::test_mesh_different_winding_orders PASSED [ 49%] tests/test_meta.py::test_meta PASSED [ 49%] tests/test_mghimage.py::test_MGHImage PASSED [ 50%] tests/test_mghimage.py::test_MGHImage_save PASSED [ 50%] tests/test_mghimage.py::test_voxToSurfMat PASSED [ 50%] tests/test_naninfrange.py::test_naninfrange PASSED [ 50%] tests/test_naninfrange.py::test_naninfrange_structured_ordered_contiguous PASSED [ 50%] tests/test_notifier.py::test_normal_usage PASSED [ 51%] tests/test_notifier.py::test_enable_disable PASSED [ 51%] tests/test_notifier.py::test_skip PASSED [ 51%] tests/test_parse_data.py::test_mesh PASSED [ 51%] tests/test_parse_data.py::test_image PASSED [ 51%] tests/test_parse_data.py::test_image_out PASSED [ 52%] tests/test_run.py::test_prepareArgs PASSED [ 52%] tests/test_run.py::test_run PASSED [ 52%] tests/test_run.py::test_run_tee PASSED [ 52%] tests/test_run.py::test_run_passthrough PASSED [ 52%] tests/test_run.py::test_cmdonly PASSED [ 52%] tests/test_run.py::test_dryrun PASSED [ 53%] tests/test_run.py::test_runfsl PASSED [ 53%] tests/test_run.py::test_run_submit PASSED [ 53%] tests/test_run.py::test_run_streams PASSED [ 53%] tests/test_run.py::test_run_logcmd PASSED [ 53%] tests/test_run.py::test_hold PASSED [ 54%] tests/test_run.py::test_func_to_cmd PASSED [ 54%] tests/test_run.py::test_job_output PASSED [ 54%] tests/test_settings.py::test_initialise PASSED [ 54%] tests/test_settings.py::test_init_configDir PASSED [ 54%] tests/test_settings.py::test_init_configDir_tempdir PASSED [ 55%] tests/test_settings.py::test_init_writeOnExit PASSED [ 55%] tests/test_settings.py::test_init_not_writeOnExit PASSED [ 55%] tests/test_settings.py::test_readConfigFile PASSED [ 55%] tests/test_settings.py::test_readwrite PASSED [ 55%] tests/test_settings.py::test_readdefault PASSED [ 56%] tests/test_settings.py::test_delete PASSED [ 56%] tests/test_settings.py::test_readwriteFile_text PASSED [ 56%] tests/test_settings.py::test_readwriteFile_binary PASSED [ 56%] tests/test_settings.py::test_deleteFile PASSED [ 56%] tests/test_settings.py::test_readall PASSED [ 57%] tests/test_settings.py::test_listFiles PASSED [ 57%] tests/test_settings.py::test_filePath PASSED [ 57%] tests/test_settings.py::test_clear PASSED [ 57%] tests/test_settings.py::test_writeConfigFile PASSED [ 57%] tests/test_settings.py::test_set PASSED [ 57%] tests/test_settings.py::test_use PASSED [ 58%] tests/test_tempdir.py::test_tempdir PASSED [ 58%] tests/test_tempdir.py::test_tempdir_root PASSED [ 58%] tests/test_tempdir.py::test_tempdir_changeto PASSED [ 58%] tests/test_tempdir.py::test_tempdir_override PASSED [ 58%] tests/test_version.py::testdir PASSED [ 59%] tests/test_version.py::test_parseVersionString PASSED [ 59%] tests/test_version.py::test_parseVersionString_bad PASSED [ 59%] tests/test_version.py::test_compareVersions PASSED [ 59%] tests/test_version.py::test_compareVersions_ignorePoint PASSED [ 59%] tests/test_version.py::test_patchVersion PASSED [ 60%] tests/test_vest.py::test_looksLikeVestLutFile PASSED [ 60%] tests/test_vest.py::test_loadVestLutFile PASSED [ 60%] tests/test_vest.py::test_generateVest PASSED [ 60%] tests/test_vest.py::test_loadVestFile PASSED [ 60%] tests/test_volumelabels.py::test_add_get_hasLabel PASSED [ 61%] tests/test_volumelabels.py::test_removeLabel PASSED [ 61%] tests/test_volumelabels.py::test_clearLabels PASSED [ 61%] tests/test_volumelabels.py::test_add_get_hasComponents PASSED [ 61%] tests/test_volumelabels.py::test_removeComponent PASSED [ 61%] tests/test_volumelabels.py::test_clearComponents PASSED [ 61%] tests/test_volumelabels.py::test_load_fixfile_long PASSED [ 62%] tests/test_volumelabels.py::test_load_fixfile_short PASSED [ 62%] tests/test_volumelabels.py::test_load_aromafile PASSED [ 62%] tests/test_volumelabels.py::test_save PASSED [ 62%] tests/test_vtk.py::test_create_vtkmesh PASSED [ 62%] tests/test_vtk.py::test_loadVTKPolydataFile PASSED [ 63%] tests/test_vtk.py::test_getFIRSTPrefix PASSED [ 63%] tests/test_vtk.py::test_findReferenceImage PASSED [ 63%] tests/test_weakfuncref.py::test_weakfuncref_call PASSED [ 63%] tests/test_weakfuncref.py::test_weakfuncref_function PASSED [ 63%] tests/test_weakfuncref.py::test_weakfuncref_method PASSED [ 64%] tests/test_filetree/test_query.py::testdir PASSED [ 64%] tests/test_filetree/test_query.py::test_query_properties PASSED [ 64%] tests/test_filetree/test_query.py::test_query PASSED [ 64%] tests/test_filetree/test_query.py::test_query_optional_var_folder PASSED [ 64%] tests/test_filetree/test_query.py::test_query_optional_var_filename PASSED [ 65%] tests/test_filetree/test_query.py::test_query_missing_files PASSED [ 65%] tests/test_filetree/test_query.py::test_query_asarray PASSED [ 65%] tests/test_filetree/test_query.py::test_query_subtree PASSED [ 65%] tests/test_filetree/test_query.py::test_query_variable_partial_set PASSED [ 65%] tests/test_filetree/test_query.py::test_query_multi_subtree PASSED [ 66%] tests/test_filetree/test_query.py::test_scan PASSED [ 66%] tests/test_filetree/test_query.py::test_allVariables PASSED [ 66%] tests/test_filetree/test_read.py::test_simple_tree PASSED [ 66%] tests/test_filetree/test_read.py::test_complicated_tree PASSED [ 66%] tests/test_filetree/test_read.py::test_parent_tree PASSED [ 66%] tests/test_filetree/test_read.py::test_custom_tree PASSED [ 67%] tests/test_filetree/test_read.py::test_format PASSED [ 67%] tests/test_filetree/test_read.py::test_read_all PASSED [ 67%] tests/test_filetree/test_read.py::test_extract_vars_but PASSED [ 67%] tests/test_filetree/test_read.py::test_read_local_sub_children PASSED [ 67%] tests/test_filetree/test_read.py::test_io PASSED [ 68%] tests/test_filetree/test_registration.py::test_register_parent PASSED [ 68%] tests/test_filetree/test_registration.py::test_children PASSED [ 68%] tests/test_filetree/test_template.py::test_variables PASSED [ 68%] tests/test_filetree/test_template.py::test_get_variables PASSED [ 68%] tests/test_filetree/test_template.py::test_multiple_optionals PASSED [ 69%] tests/test_scripts/test_fsl_abspath.py::test_usage PASSED [ 69%] tests/test_scripts/test_fsl_abspath.py::test_fsl_abspath PASSED [ 69%] tests/test_scripts/test_fsl_ents.py::test_genComponentIndexList PASSED [ 69%] tests/test_scripts/test_fsl_ents.py::test_loadConfoundFiles PASSED [ 69%] tests/test_scripts/test_fsl_ents.py::test_fsl_ents PASSED [ 70%] tests/test_scripts/test_fsl_ents.py::test_fsl_ents_usage PASSED [ 70%] tests/test_scripts/test_fsl_ents.py::test_fsl_ents_badargs PASSED [ 70%] tests/test_scripts/test_imglob.py::testdir PASSED [ 70%] tests/test_scripts/test_imglob.py::test_imglob_shouldPass1 PASSED [ 70%] tests/test_scripts/test_imglob.py::test_imglob_shouldPass2 PASSED [ 71%] tests/test_scripts/test_imglob.py::test_imglob_script_shouldFail PASSED [ 71%] tests/test_scripts/test_imln.py::test_usage PASSED [ 71%] tests/test_scripts/test_imln.py::test_imln PASSED [ 71%] tests/test_scripts/test_imrm.py::test_imrm_usage PASSED [ 71%] tests/test_scripts/test_imrm.py::test_imrm PASSED [ 71%] tests/test_scripts/test_imtest.py::test_wrongargs PASSED [ 72%] tests/test_scripts/test_imtest.py::test_imtest PASSED [ 72%] tests/test_scripts/test_remove_ext.py::test_usage PASSED [ 72%] tests/test_scripts/test_remove_ext.py::test_remove_ext PASSED [ 72%] tests/test_scripts/test_resample_image.py::test_resample_image_shape PASSED [ 72%] tests/test_scripts/test_resample_image.py::test_resample_image_shape_4D PASSED [ 73%] tests/test_scripts/test_resample_image.py::test_resample_image_dim PASSED [ 73%] tests/test_scripts/test_resample_image.py::test_resample_image_ref PASSED [ 73%] tests/test_scripts/test_resample_image.py::test_resample_image_bad_options PASSED [ 73%] tests/test_scripts/test_vest2text.py::test_usage PASSED [ 73%] tests/test_scripts/test_vest2text.py::test_Vest2Text PASSED [ 74%] tests/test_scripts/test_vest2text.py::test_Text2Vest PASSED [ 74%] tests/test_transform/test_affine.py::test_invert PASSED [ 74%] tests/test_transform/test_affine.py::test_concat PASSED [ 74%] tests/test_transform/test_affine.py::test_veclength PASSED [ 74%] tests/test_transform/test_affine.py::test_normalise PASSED [ 75%] tests/test_transform/test_affine.py::test_scaleOffsetXform PASSED [ 75%] tests/test_transform/test_affine.py::test_compose_and_decompose PASSED [ 75%] tests/test_transform/test_affine.py::test_compose_scaleAtOrigin PASSED [ 75%] tests/test_transform/test_affine.py::test_rotMatToAxisAngles PASSED [ 75%] tests/test_transform/test_affine.py::test_rotMatToAffine PASSED [ 76%] tests/test_transform/test_affine.py::test_axisBounds PASSED [ 76%] tests/test_transform/test_affine.py::test_mergeBounds PASSED [ 76%] tests/test_transform/test_affine.py::test_transform PASSED [ 76%] tests/test_transform/test_affine.py::test_transform_vector PASSED [ 76%] tests/test_transform/test_affine.py::test_transformNormal PASSED [ 76%] tests/test_transform/test_affine.py::test_rmsdev PASSED [ 77%] tests/test_transform/test_affine.py::test_rescale PASSED [ 77%] tests/test_transform/test_flirt.py::test_read_write PASSED [ 77%] tests/test_transform/test_flirt.py::test_fromFlirt PASSED [ 77%] tests/test_transform/test_flirt.py::test_toFlirt PASSED [ 77%] tests/test_transform/test_flirt.py::test_flirtMatrixToSform PASSED [ 78%] tests/test_transform/test_flirt.py::test_sformToFlirtMatrix PASSED [ 78%] tests/test_transform/test_fnirt.py::test_readFnirt PASSED [ 78%] tests/test_transform/test_fnirt.py::test_readFnirt_defType_intent PASSED [ 78%] tests/test_transform/test_fnirt.py::test_toFnirt PASSED [ 78%] tests/test_transform/test_fnirt.py::test_fromFnirt PASSED [ 79%] tests/test_transform/test_nonlinear.py::test_detectDeformationType PASSED [ 79%] tests/test_transform/test_nonlinear.py::test_convertDeformationType PASSED [ 79%] tests/test_transform/test_nonlinear.py::test_convertDeformationSpace PASSED [ 79%] tests/test_transform/test_nonlinear.py::test_DeformationField_transform PASSED [ 79%] tests/test_transform/test_nonlinear.py::test_CoefficientField_displacements PASSED [ 80%] tests/test_transform/test_nonlinear.py::test_CoefficientField_transform PASSED [ 80%] tests/test_transform/test_nonlinear.py::test_coefficientField_transform_altref PASSED [ 80%] tests/test_transform/test_nonlinear.py::test_coefficientFieldToDeformationField PASSED [ 80%] tests/test_transform/test_nonlinear.py::test_applyDeformation PASSED [ 80%] tests/test_transform/test_nonlinear.py::test_applyDeformation_altsrc PASSED [ 80%] tests/test_transform/test_nonlinear.py::test_applyDeformation_premat PASSED [ 81%] tests/test_transform/test_nonlinear.py::test_applyDeformation_altref PASSED [ 81%] tests/test_transform/test_nonlinear.py::test_applyDeformation_worldAligned PASSED [ 81%] tests/test_transform/test_x5.py::test_readWriteLinearX5 PASSED [ 81%] tests/test_transform/test_x5.py::test_readWriteNonLinearX5 PASSED [ 81%] tests/test_wrappers/test_fslmaths.py::testenv PASSED [ 82%] tests/test_wrappers/test_fslmaths.py::test_fslmaths PASSED [ 82%] tests/test_wrappers/test_fslstats.py::test_fslstats_cmdline PASSED [ 82%] tests/test_wrappers/test_fslstats.py::test_fslstats_result PASSED [ 82%] tests/test_wrappers/test_fslstats.py::test_fslstats_index_mask_missing_labels PASSED [ 82%] tests/test_wrappers/test_wrappers.py::testenv PASSED [ 83%] tests/test_wrappers/test_wrappers.py::test_bet PASSED [ 83%] tests/test_wrappers/test_wrappers.py::test_robustfov PASSED [ 83%] tests/test_wrappers/test_wrappers.py::test_eddy PASSED [ 83%] tests/test_wrappers/test_wrappers.py::test_topup PASSED [ 83%] tests/test_wrappers/test_wrappers.py::test_applytopup PASSED [ 84%] tests/test_wrappers/test_wrappers.py::test_flirt PASSED [ 84%] tests/test_wrappers/test_wrappers.py::test_fixscaleskew PASSED [ 84%] tests/test_wrappers/test_wrappers.py::test_epi_reg PASSED [ 84%] tests/test_wrappers/test_wrappers.py::test_applyxfm PASSED [ 84%] tests/test_wrappers/test_wrappers.py::test_applyxfm4D PASSED [ 85%] tests/test_wrappers/test_wrappers.py::test_invxfm PASSED [ 85%] tests/test_wrappers/test_wrappers.py::test_concatxfm PASSED [ 85%] tests/test_wrappers/test_wrappers.py::test_mcflirt PASSED [ 85%] tests/test_wrappers/test_wrappers.py::test_fnirt PASSED [ 85%] tests/test_wrappers/test_wrappers.py::test_applywarp PASSED [ 85%] tests/test_wrappers/test_wrappers.py::test_invwarp PASSED [ 86%] tests/test_wrappers/test_wrappers.py::test_convertwarp PASSED [ 86%] tests/test_wrappers/test_wrappers.py::test_fugue PASSED [ 86%] tests/test_wrappers/test_wrappers.py::test_sigloss PASSED [ 86%] tests/test_wrappers/test_wrappers.py::test_prelude PASSED [ 86%] tests/test_wrappers/test_wrappers.py::test_melodic PASSED [ 87%] tests/test_wrappers/test_wrappers.py::test_fsl_regfilt PASSED [ 87%] tests/test_wrappers/test_wrappers.py::test_fsl_glm PASSED [ 87%] tests/test_wrappers/test_wrappers.py::test_fslorient PASSED [ 87%] tests/test_wrappers/test_wrappers.py::test_fslreorient2std PASSED [ 87%] tests/test_wrappers/test_wrappers.py::test_fslroi PASSED [ 88%] tests/test_wrappers/test_wrappers.py::test_slicer PASSED [ 88%] tests/test_wrappers/test_wrappers.py::test_cluster PASSED [ 88%] tests/test_wrappers/test_wrappers.py::test_fast PASSED [ 88%] tests/test_wrappers/test_wrappers.py::test_fsl_anat PASSED [ 88%] tests/test_wrappers/test_wrappers.py::test_gps PASSED [ 89%] tests/test_wrappers/test_wrappers.py::test_tbss PASSED [ 89%] tests/test_wrappers/test_wrappers.py::test_fsl_prepare_fieldmap PASSED [ 89%] tests/test_wrappers/test_wrappers.py::test_fsl_sub PASSED [ 89%] tests/test_wrappers/test_wrappers.py::test_standard_space_roi PASSED [ 89%] tests/test_wrappers/test_wrappers.py::test_fslswapdim PASSED [ 90%] tests/test_wrappers/test_wrappers.py::test_first PASSED [ 90%] tests/test_wrappers/test_wrappers.py::test_fslmerge PASSED [ 90%] tests/test_wrappers/test_wrappers.py::test_fslselectvols PASSED [ 90%] tests/test_wrappers/test_wrappers.py::test_fslsplit PASSED [ 90%] tests/test_wrappers/test_wrappers.py::test_fslcpgeom PASSED [ 90%] tests/test_wrappers/test_wrappers.py::test_bianca PASSED [ 91%] tests/test_wrappers/test_wrappers.py::test_feat PASSED [ 91%] tests/test_wrappers/test_wrappers.py::test_featquery PASSED [ 91%] tests/test_wrappers/test_wrappers.py::test_dtifit PASSED [ 91%] tests/test_wrappers/test_wrappers.py::test_xfibres PASSED [ 91%] tests/test_wrappers/test_wrappers.py::test_xfibres_gpu PASSED [ 92%] tests/test_wrappers/test_wrappers.py::test_split_parts_gpu PASSED [ 92%] tests/test_wrappers/test_wrappers.py::test_bedpostx_postproc_gpu PASSED [ 92%] tests/test_wrappers/test_wrappers.py::test_probtrackx PASSED [ 92%] tests/test_wrappers/test_wrappers.py::test_probtrackx2 PASSED [ 92%] tests/test_wrappers/test_wrappers.py::test_probtrackx2_gpu PASSED [ 93%] tests/test_wrappers/test_wrappers.py::test_oxford_asl PASSED [ 93%] tests/test_wrappers/test_wrappers.py::test_asl_file PASSED [ 93%] tests/test_wrappers/test_wrappers.py::test_randomise PASSED [ 93%] tests/test_wrappers/test_wrappers_run_arguments.py::test_stdout_stderr_exitcode[True] PASSED [ 93%] tests/test_wrappers/test_wrappers_run_arguments.py::test_stdout_stderr_exitcode[False] PASSED [ 94%] tests/test_wrappers/test_wrappers_run_arguments.py::test_log[True] PASSED [ 94%] tests/test_wrappers/test_wrappers_run_arguments.py::test_log[False] PASSED [ 94%] tests/test_wrappers/test_wrappers_run_arguments.py::test_cmdonly[True] PASSED [ 94%] tests/test_wrappers/test_wrappers_run_arguments.py::test_cmdonly[False] PASSED [ 94%] tests/test_wrappers/test_wrappers_run_arguments.py::test_wrapperconfig[True] PASSED [ 95%] tests/test_wrappers/test_wrappers_run_arguments.py::test_wrapperconfig[False] PASSED [ 95%] tests/test_wrappers/test_wrapperutils.py::testdir PASSED [ 95%] tests/test_wrappers/test_wrapperutils.py::test_applyArgStyle_default PASSED [ 95%] tests/test_wrappers/test_wrapperutils.py::test_applyArgStyle PASSED [ 95%] tests/test_wrappers/test_wrapperutils.py::test_applyArgStyle_charstyle PASSED [ 95%] tests/test_wrappers/test_wrapperutils.py::test_applyArgStyle_argmap PASSED [ 96%] tests/test_wrappers/test_wrapperutils.py::test_applyArgStyle_valmap_show_hide PASSED [ 96%] tests/test_wrappers/test_wrapperutils.py::test_applyArgStyle_valmap_unroll_list PASSED [ 96%] tests/test_wrappers/test_wrapperutils.py::test_applyArgStyle_argmap_valmap PASSED [ 96%] tests/test_wrappers/test_wrapperutils.py::test_applyArgStyle_callable_argmap PASSED [ 96%] tests/test_wrappers/test_wrapperutils.py::test_namedPositionals PASSED [ 97%] tests/test_wrappers/test_wrapperutils.py::test_fileOrArray PASSED [ 97%] tests/test_wrappers/test_wrapperutils.py::test_fileOrThing_sequence PASSED [ 97%] tests/test_wrappers/test_wrapperutils.py::test_fileOrThing_var_positionals PASSED [ 97%] tests/test_wrappers/test_wrapperutils.py::test_fileOrText PASSED [ 97%] tests/test_wrappers/test_wrapperutils.py::test_fileOrThing_pathlib PASSED [ 98%] tests/test_wrappers/test_wrapperutils.py::test_fileOrThing_results PASSED [ 98%] tests/test_wrappers/test_wrapperutils.py::test_FileOrThing_invalid_identifiers PASSED [ 98%] tests/test_wrappers/test_wrapperutils.py::test_cmdwrapper PASSED [ 98%] tests/test_wrappers/test_wrapperutils.py::test_fslwrapper PASSED [ 98%] tests/test_wrappers/test_wrapperutils.py::test_cmdwrapper_submit PASSED [ 99%] tests/test_wrappers/test_wrapperutils.py::test_fslwrapper_submit PASSED [ 99%] tests/test_wrappers/test_wrapperutils.py::test_cmdwrapper_fileorthing_cmdonly PASSED [ 99%] tests/test_wrappers/test_wrapperutils.py::test_cmdwrapper_cmdonly_assert PASSED [ 99%] tests/test_wrappers/test_wrapperutils.py::test_fileOrArray_all_tempfiles_cleared PASSED [ 99%] tests/test_wrappers/test_wrapperutils.py::test_fileOrText_all_tempfiles_cleared PASSED [100%]/usr/lib64/python3.12/site-packages/coverage/report_core.py:113: CoverageWarning: Couldn't parse '/tmp/tmp3mg71a38/fsl/bin/fslstats': No source for code: '/tmp/tmp3mg71a38/fsl/bin/fslstats'. (couldnt-parse) coverage._warn(msg, slug="couldnt-parse") /usr/lib64/python3.12/site-packages/coverage/report_core.py:113: CoverageWarning: Couldn't parse '/tmp/tmp5q7aozu7/fsl/bin/fslstats': No source for code: '/tmp/tmp5q7aozu7/fsl/bin/fslstats'. (couldnt-parse) coverage._warn(msg, slug="couldnt-parse") /usr/lib64/python3.12/site-packages/coverage/report_core.py:113: CoverageWarning: Couldn't parse '/tmp/tmp6aq0ni25/fsl/bin/fsl_sub': No source for code: '/tmp/tmp6aq0ni25/fsl/bin/fsl_sub'. (couldnt-parse) coverage._warn(msg, slug="couldnt-parse") /usr/lib64/python3.12/site-packages/coverage/report_core.py:113: CoverageWarning: Couldn't parse '/tmp/tmp8jp0zawa/fsl/bin/fslstats': No source for code: '/tmp/tmp8jp0zawa/fsl/bin/fslstats'. (couldnt-parse) coverage._warn(msg, slug="couldnt-parse") /usr/lib64/python3.12/site-packages/coverage/report_core.py:113: CoverageWarning: Couldn't parse '/tmp/tmp91hww6r8/fsl/bin/fslstats': No source for code: '/tmp/tmp91hww6r8/fsl/bin/fslstats'. (couldnt-parse) coverage._warn(msg, slug="couldnt-parse") /usr/lib64/python3.12/site-packages/coverage/report_core.py:113: CoverageWarning: Couldn't parse '/tmp/tmp_l13krz7/fsl/bin/fsl_sub': No source for code: '/tmp/tmp_l13krz7/fsl/bin/fsl_sub'. (couldnt-parse) coverage._warn(msg, slug="couldnt-parse") /usr/lib64/python3.12/site-packages/coverage/report_core.py:113: CoverageWarning: Couldn't parse '/tmp/tmplqmoed7s/fsl/bin/fslstats': No source for code: '/tmp/tmplqmoed7s/fsl/bin/fslstats'. (couldnt-parse) coverage._warn(msg, slug="couldnt-parse") /usr/lib64/python3.12/site-packages/coverage/report_core.py:113: CoverageWarning: Couldn't parse '/tmp/tmpono__t9h/fsl/bin/fslstats': No source for code: '/tmp/tmpono__t9h/fsl/bin/fslstats'. (couldnt-parse) coverage._warn(msg, slug="couldnt-parse") =============================== warnings summary =============================== tests/test_filetree/test_query.py:17 /builddir/build/BUILD/fslpy-3.13.3/tests/test_filetree/test_query.py:17: DeprecationWarning: fsl.utils.filetree is deprecated from version 3.6.0 and will be removed in 4.0.0. The filetree package is now released as a separate Python library ("file-tree" on PyPi), and will be removed in a future version of fslpy. import fsl.utils.filetree as filetree tests/test_assertions.py::testdir /usr/lib/python3.12/site-packages/_pytest/python.py:198: PytestReturnNotNoneWarning: Expected None, but tests/test_assertions.py::testdir returned .ctx object at 0x7f7fdb9e5220>, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti /builddir/build/BUILD/fslpy-3.13.3/fsl/data/cifti.py:444: DeprecationWarning: metadata property deprecated. Use GiftiMetaData object as dict or pass to dict() for a standard dictionary. * deprecated from version: 4.0 * Will raise as of version: 6.0 if primary_str in meta.meta.metadata: tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti tests/test_cifti.py::test_read_gifti /builddir/build/BUILD/fslpy-3.13.3/fsl/data/cifti.py:446: DeprecationWarning: metadata property deprecated. Use GiftiMetaData object as dict or pass to dict() for a standard dictionary. * deprecated from version: 4.0 * Will raise as of version: 6.0 if secondary_str in meta.meta.metadata: tests/test_freesurfer.py::test_FreesurferMesh_create tests/test_freesurfer.py::test_FreesurferMesh_create_loadall tests/test_freesurfer.py::test_loadVertices tests/test_freesurfer.py::test_loadVertexData_morph tests/test_freesurfer.py::test_loadVertexData_label tests/test_freesurfer.py::test_loadVertexData_mgh tests/test_freesurfer.py::test_loadVertexData_annot /usr/lib/python3.12/site-packages/nibabel/freesurfer/io.py:62: UserWarning: Unknown extension code. warnings.warn('Unknown extension code.') tests/test_freesurfer.py::test_FreesurferMesh_create tests/test_freesurfer.py::test_FreesurferMesh_create_loadall tests/test_freesurfer.py::test_loadVertices tests/test_freesurfer.py::test_loadVertexData_morph tests/test_freesurfer.py::test_loadVertexData_label tests/test_freesurfer.py::test_loadVertexData_mgh tests/test_freesurfer.py::test_loadVertexData_annot /usr/lib/python3.12/site-packages/nibabel/freesurfer/io.py:188: UserWarning: No volume information contained in the file warnings.warn('No volume information contained in the file') tests/test_fsl_utils_path.py::testdir /usr/lib/python3.12/site-packages/_pytest/python.py:198: PytestReturnNotNoneWarning: Expected None, but tests/test_fsl_utils_path.py::testdir returned .ctx object at 0x7f7fdb9b6cc0>, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( tests/test_gifti.py::test_loadGiftiVertexData /usr/lib/python3.12/site-packages/nibabel/gifti/parse_gifti_fast.py:294: UserWarning: Actual # of data arrays does not match # expected: 4 != 3. warnings.warn( tests/test_mesh.py::test_trimesh_no_trimesh /usr/lib/python3.12/site-packages/trimesh/util.py:94: DeprecationWarning: 'pkgutil.find_loader' is deprecated and slated for removal in Python 3.14; use importlib.util.find_spec() instead return pkgutil.find_loader(name) is not None tests/test_version.py::testdir /usr/lib/python3.12/site-packages/_pytest/python.py:198: PytestReturnNotNoneWarning: Expected None, but tests/test_version.py::testdir returned .ctx object at 0x7f7fd99243e0>, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( tests/test_filetree/test_query.py::testdir /usr/lib/python3.12/site-packages/_pytest/python.py:198: PytestReturnNotNoneWarning: Expected None, but tests/test_filetree/test_query.py::testdir returned .ctx object at 0x7f7fd9a6ed20>, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( tests/test_scripts/test_imglob.py::testdir /usr/lib/python3.12/site-packages/_pytest/python.py:198: PytestReturnNotNoneWarning: Expected None, but tests/test_scripts/test_imglob.py::testdir returned .ctx object at 0x7f7fd9925430>, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( tests/test_transform/test_nonlinear.py::test_applyDeformation tests/test_transform/test_nonlinear.py::test_applyDeformation_altsrc tests/test_transform/test_nonlinear.py::test_applyDeformation_altsrc tests/test_transform/test_nonlinear.py::test_applyDeformation_altsrc tests/test_transform/test_nonlinear.py::test_applyDeformation_premat tests/test_transform/test_nonlinear.py::test_applyDeformation_premat tests/test_transform/test_nonlinear.py::test_applyDeformation_premat tests/test_transform/test_nonlinear.py::test_applyDeformation_altref tests/test_transform/test_nonlinear.py::test_applyDeformation_worldAligned /builddir/build/BUILD/fslpy-3.13.3/fsl/transform/nonlinear.py:792: DeprecationWarning: Please use `map_coordinates` from the `scipy.ndimage` namespace, the `scipy.ndimage.interpolation` namespace is deprecated. return ndinterp.map_coordinates(image.data, tests/test_wrappers/test_fslmaths.py::testenv /usr/lib/python3.12/site-packages/_pytest/python.py:198: PytestReturnNotNoneWarning: Expected None, but tests/test_wrappers/test_fslmaths.py::testenv returned , which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( tests/test_wrappers/test_wrappers.py::testenv /usr/lib/python3.12/site-packages/_pytest/python.py:198: PytestReturnNotNoneWarning: Expected None, but tests/test_wrappers/test_wrappers.py::testenv returned , which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( tests/test_wrappers/test_wrapperutils.py::testdir /usr/lib/python3.12/site-packages/_pytest/python.py:198: PytestReturnNotNoneWarning: Expected None, but tests/test_wrappers/test_wrapperutils.py::testdir returned .ctx object at 0x7f7fd99099d0>, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -------- coverage: platform linux, python 3.12.0-candidate-1 --------- Name Stmts Miss Cover ---------------------------------------------------- fsl/data/__init__.py 2 0 100% fsl/data/atlases.py 319 251 21% fsl/data/bitmap.py 71 6 92% fsl/data/cifti.py 261 53 80% fsl/data/constants.py 115 0 100% fsl/data/dicom.py 116 81 30% fsl/data/dtifit.py 110 5 95% fsl/data/featanalysis.py 171 1 99% fsl/data/featdesign.py 174 24 86% fsl/data/featimage.py 132 0 100% fsl/data/fixlabels.py 89 1 99% fsl/data/freesurfer.py 143 2 99% fsl/data/gifti.py 136 7 95% fsl/data/image.py 571 35 94% fsl/data/imagewrapper.py 362 301 17% fsl/data/melodicanalysis.py 80 0 100% fsl/data/melodicimage.py 46 0 100% fsl/data/mesh.py 225 8 96% fsl/data/mghimage.py 66 0 100% fsl/data/utils.py 56 1 98% fsl/data/vest.py 59 2 97% fsl/data/volumelabels.py 101 1 99% fsl/data/vtk.py 63 2 97% fsl/scripts/Text2Vest.py 19 2 89% fsl/scripts/Vest2Text.py 19 2 89% fsl/scripts/fsl_abspath.py 14 2 86% fsl/scripts/fsl_ents.py 94 1 99% fsl/scripts/imglob.py 55 1 98% fsl/scripts/imln.py 39 6 85% fsl/scripts/imrm.py 19 2 89% fsl/scripts/imtest.py 24 2 92% fsl/scripts/remove_ext.py 18 2 89% fsl/scripts/resample_image.py 80 2 98% fsl/transform/__init__.py 1 0 100% fsl/transform/affine.py 247 1 99% fsl/transform/flirt.py 25 0 100% fsl/transform/fnirt.py 71 7 90% fsl/transform/nonlinear.py 244 6 98% fsl/transform/x5.py 118 14 88% fsl/utils/__init__.py 1 0 100% fsl/utils/assertions.py 58 0 100% fsl/utils/bids.py 80 2 98% fsl/utils/cache.py 61 0 100% fsl/utils/deprecated.py 36 5 86% fsl/utils/ensure.py 9 0 100% fsl/utils/filetree/__init__.py 6 0 100% fsl/utils/filetree/filetree.py 278 25 91% fsl/utils/filetree/parse.py 63 9 86% fsl/utils/filetree/query.py 133 0 100% fsl/utils/filetree/utils.py 195 6 97% fsl/utils/fslsub.py 177 43 76% fsl/utils/idle.py 327 250 24% fsl/utils/image/__init__.py 1 0 100% fsl/utils/image/resample.py 66 1 98% fsl/utils/image/roi.py 38 0 100% fsl/utils/imcp.py 55 23 58% fsl/utils/memoize.py 103 3 97% fsl/utils/meta.py 19 0 100% fsl/utils/naninfrange.py 26 0 100% fsl/utils/notifier.py 148 13 91% fsl/utils/parse_data.py 26 5 81% fsl/utils/path.py 178 3 98% fsl/utils/platform.py 165 49 70% fsl/utils/run.py 238 39 84% fsl/utils/settings.py 175 1 99% fsl/utils/tempdir.py 19 0 100% fsl/utils/weakfuncref.py 48 2 96% fsl/version.py 35 0 100% fsl/wrappers/__init__.py 24 0 100% fsl/wrappers/avwutils.py 56 0 100% fsl/wrappers/bedpostx.py 72 2 97% fsl/wrappers/bet.py 26 0 100% fsl/wrappers/bianca.py 37 2 95% fsl/wrappers/dtifit.py 13 0 100% fsl/wrappers/eddy.py 39 1 97% fsl/wrappers/epi_reg.py 13 0 100% fsl/wrappers/fast.py 16 0 100% fsl/wrappers/feat.py 36 1 97% fsl/wrappers/first.py 41 0 100% fsl/wrappers/flirt.py 60 0 100% fsl/wrappers/fnirt.py 35 0 100% fsl/wrappers/fsl_anat.py 16 0 100% fsl/wrappers/fsl_sub.py 8 0 100% fsl/wrappers/fslmaths.py 128 3 98% fsl/wrappers/fslstats.py 63 0 100% fsl/wrappers/fugue.py 31 0 100% fsl/wrappers/melodic.py 31 0 100% fsl/wrappers/misc.py 59 0 100% fsl/wrappers/oxford_asl.py 23 0 100% fsl/wrappers/randomise.py 9 0 100% fsl/wrappers/tbss.py 33 0 100% fsl/wrappers/wrapperutils.py 376 46 88% ---------------------------------------------------- TOTAL 8564 1365 84% ========== 521 passed, 20 deselected, 46 warnings in 70.91s (0:01:10) ========== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-fslpy-3.13.3-1.fc40.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.9sWzfC + umask 022 + cd /builddir/build/BUILD + cd fslpy-3.13.3 + DOCDIR=/builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/doc/python3-fslpy + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/doc/python3-fslpy + cp -pr /builddir/build/BUILD/fslpy-3.13.3/README.rst /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64/usr/share/doc/python3-fslpy + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-fslpy = 3.13.3-1.fc40 python3-fslpy = 3.13.3-1.fc40 python3.12-fslpy = 3.13.3-1.fc40 python3.12dist(fslpy) = 3.13.3 python3dist(fslpy) = 3.13.3 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.12dist(wxpython) >= 4 with python3.12dist(wxpython) < 5) /usr/bin/python3 python(abi) = 3.12 python3.12dist(dill) python3.12dist(h5py) >= 2.9 python3.12dist(indexed-gzip) >= 0.7 python3.12dist(nibabel) >= 2.4 python3.12dist(numpy) >= 1 python3.12dist(pillow) >= 3.2 python3.12dist(rtree) >= 0.8.3 python3.12dist(scipy) >= 0.18 python3.12dist(trimesh) >= 2.37.29 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 Wrote: /builddir/build/SRPMS/python-fslpy-3.13.3-1.fc40.src.rpm Wrote: /builddir/build/RPMS/python3-fslpy-3.13.3-1.fc40.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.dAkV20 + umask 022 + cd /builddir/build/BUILD + cd fslpy-3.13.3 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-fslpy-3.13.3-1.fc40.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.6Q2WIJ + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/fslpy-3.13.3-SPECPARTS + rm -rf fslpy-3.13.3 fslpy-3.13.3.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0