Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c198' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6866241-fedora-39-x86_64 --chroot fedora-39-x86_64 Version: 0.70 PID: 5869 Logging PID: 5870 Task: {'appstream': False, 'background': True, 'build_id': 6866241, 'buildroot_pkgs': [], 'chroot': 'fedora-39-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '00349ab6898fd20a9b74bdd525f9f7e78edadb4a', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/snakemake', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'snakemake', 'package_version': '7.32.4-3', 'project_dirname': 'automatic-obsoletes', 'project_name': 'automatic-obsoletes', 'project_owner': 'torsava', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/torsava/automatic-obsoletes/fedora-39-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'torsava/automatic-obsoletes--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '6866241-fedora-39-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/snakemake /var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/snakemake', '/var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake'... Running: git checkout 00349ab6898fd20a9b74bdd525f9f7e78edadb4a -- cmd: ['git', 'checkout', '00349ab6898fd20a9b74bdd525f9f7e78edadb4a', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake rc: 0 stdout: stderr: Note: switching to '00349ab6898fd20a9b74bdd525f9f7e78edadb4a'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 00349ab automatic import of snakemake Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated INFO: Reading sources specification file: sources INFO: Downloading snakemake-7.32.4.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o snakemake-7.32.4.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/torsava/automatic-obsoletes/snakemake/snakemake-7.32.4.tar.gz/md5/2d7cd0faf40a8ca3c6e47f214536d1c9/snakemake-7.32.4.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 8677k 100 8677k 0 0 19.3M 0 --:--:-- --:--:-- --:--:-- 19.3M INFO: Reading stdout from command: md5sum snakemake-7.32.4.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1704460428.139735 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.4 starting (python version = 3.11.3, NVR = mock-5.4-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1704460428.139735 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake/snakemake.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.4 INFO: Mock Version: 5.4 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1704460428.139735/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-x86_64-bootstrap-1704460428.139735/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/8ff7ad910417a7b8a49019008335921d2aac0e3304a19ce258deabf431e59801/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/8ff7ad910417a7b8a49019008335921d2aac0e3304a19ce258deabf431e59801/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 55 MB/s | 14 MB 00:00 fedora 29 MB/s | 89 MB 00:03 updates 35 MB/s | 27 MB 00:00 Last metadata expiration check: 0:00:02 ago on Fri Jan 5 13:14:19 2024. Package python3-dnf-4.18.1-2.fc39.noarch is already installed. Dependencies resolved. ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: python3-dnf-plugins-core noarch 4.4.4-1.fc39 copr_base 302 k Upgrading: dnf noarch 4.18.2-1.fc39 copr_base 497 k dnf-data noarch 4.18.2-1.fc39 copr_base 40 k python3-dnf noarch 4.18.2-1.fc39 copr_base 550 k yum noarch 4.18.2-1.fc39 copr_base 37 k Installing dependencies: dbus-libs x86_64 1:1.14.10-1.fc39 fedora 156 k python3-dateutil noarch 1:2.8.2-11.fc39 copr_base 345 k python3-dbus x86_64 1.3.2-4.fc39 fedora 157 k python3-distro noarch 1.8.0-6.fc39 copr_base 45 k python3-six noarch 1.16.0-12.fc39 copr_base 41 k python3-systemd x86_64 235-6.fc39 copr_base 101 k Transaction Summary ================================================================================ Install 7 Packages Upgrade 4 Packages Total download size: 2.2 M Downloading Packages: (1/11): python3-dnf-plugins-core-4.4.4-1.fc39.n 3.1 MB/s | 302 kB 00:00 (2/11): python3-dateutil-2.8.2-11.fc39.noarch.r 3.4 MB/s | 345 kB 00:00 (3/11): python3-six-1.16.0-12.fc39.noarch.rpm 2.1 MB/s | 41 kB 00:00 (4/11): python3-systemd-235-6.fc39.x86_64.rpm 2.5 MB/s | 101 kB 00:00 (5/11): python3-distro-1.8.0-6.fc39.noarch.rpm 135 kB/s | 45 kB 00:00 (6/11): dnf-4.18.2-1.fc39.noarch.rpm 7.9 MB/s | 497 kB 00:00 (7/11): dnf-data-4.18.2-1.fc39.noarch.rpm 2.9 MB/s | 40 kB 00:00 (8/11): python3-dnf-4.18.2-1.fc39.noarch.rpm 14 MB/s | 550 kB 00:00 (9/11): yum-4.18.2-1.fc39.noarch.rpm 3.8 MB/s | 37 kB 00:00 (10/11): python3-dbus-1.3.2-4.fc39.x86_64.rpm 440 kB/s | 157 kB 00:00 (11/11): dbus-libs-1.14.10-1.fc39.x86_64.rpm 250 kB/s | 156 kB 00:00 -------------------------------------------------------------------------------- Total 2.9 MB/s | 2.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : dnf-data-4.18.2-1.fc39.noarch 1/15 Upgrading : python3-dnf-4.18.2-1.fc39.noarch 2/15 Upgrading : dnf-4.18.2-1.fc39.noarch 3/15 Running scriptlet: dnf-4.18.2-1.fc39.noarch 3/15 Installing : dbus-libs-1:1.14.10-1.fc39.x86_64 4/15 Installing : python3-dbus-1.3.2-4.fc39.x86_64 5/15 Installing : python3-systemd-235-6.fc39.x86_64 6/15 Installing : python3-six-1.16.0-12.fc39.noarch 7/15 Installing : python3-dateutil-1:2.8.2-11.fc39.noarch 8/15 Installing : python3-distro-1.8.0-6.fc39.noarch 9/15 Installing : python3-dnf-plugins-core-4.4.4-1.fc39.noarch 10/15 Upgrading : yum-4.18.2-1.fc39.noarch 11/15 Cleanup : yum-4.18.1-2.fc39.noarch 12/15 Running scriptlet: dnf-4.18.1-2.fc39.noarch 13/15 Cleanup : dnf-4.18.1-2.fc39.noarch 13/15 Running scriptlet: dnf-4.18.1-2.fc39.noarch 13/15 Cleanup : python3-dnf-4.18.1-2.fc39.noarch 14/15 Cleanup : dnf-data-4.18.1-2.fc39.noarch 15/15 Running scriptlet: dnf-data-4.18.1-2.fc39.noarch 15/15 Verifying : python3-dateutil-1:2.8.2-11.fc39.noarch 1/15 Verifying : python3-distro-1.8.0-6.fc39.noarch 2/15 Verifying : python3-dnf-plugins-core-4.4.4-1.fc39.noarch 3/15 Verifying : python3-six-1.16.0-12.fc39.noarch 4/15 Verifying : python3-systemd-235-6.fc39.x86_64 5/15 Verifying : dbus-libs-1:1.14.10-1.fc39.x86_64 6/15 Verifying : python3-dbus-1.3.2-4.fc39.x86_64 7/15 Verifying : dnf-4.18.2-1.fc39.noarch 8/15 Verifying : dnf-4.18.1-2.fc39.noarch 9/15 Verifying : dnf-data-4.18.2-1.fc39.noarch 10/15 Verifying : dnf-data-4.18.1-2.fc39.noarch 11/15 Verifying : python3-dnf-4.18.2-1.fc39.noarch 12/15 Verifying : python3-dnf-4.18.1-2.fc39.noarch 13/15 Verifying : yum-4.18.2-1.fc39.noarch 14/15 Verifying : yum-4.18.1-2.fc39.noarch 15/15 Upgraded: dnf-4.18.2-1.fc39.noarch dnf-data-4.18.2-1.fc39.noarch python3-dnf-4.18.2-1.fc39.noarch yum-4.18.2-1.fc39.noarch Installed: dbus-libs-1:1.14.10-1.fc39.x86_64 python3-dateutil-1:2.8.2-11.fc39.noarch python3-dbus-1.3.2-4.fc39.x86_64 python3-distro-1.8.0-6.fc39.noarch python3-dnf-plugins-core-4.4.4-1.fc39.noarch python3-six-1.16.0-12.fc39.noarch python3-systemd-235-6.fc39.x86_64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1704460428.139735/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc39.x86_64 rpm-sequoia-1.5.0-1.fc39.x86_64 python3-dnf-4.18.2-1.fc39.noarch python3-dnf-plugins-core-4.4.4-1.fc39.noarch yum-4.18.2-1.fc39.noarch Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 41 MB/s | 14 MB 00:00 fedora 21 MB/s | 89 MB 00:04 updates 7.4 MB/s | 27 MB 00:03 Last metadata expiration check: 0:00:03 ago on Fri Jan 5 13:15:00 2024. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.21-1.fc39 updates 1.8 M bzip2 x86_64 1.0.8-16.fc39 fedora 52 k coreutils x86_64 9.3-4.fc39 fedora 1.1 M cpio x86_64 2.14-4.fc39 fedora 279 k diffutils x86_64 3.10-3.fc39 fedora 398 k fedora-release-common noarch 39-34 updates 19 k findutils x86_64 1:4.9.0-5.fc39 fedora 492 k gawk x86_64 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.38-14.fc39 updates 70 k grep x86_64 3.11-3.fc39 fedora 298 k gzip x86_64 1.12-6.fc39 fedora 166 k info x86_64 7.0.3-3.fc39 fedora 182 k patch x86_64 2.7.6-22.fc39 fedora 125 k redhat-rpm-config noarch 262-1.fc39 fedora 84 k rpm-build x86_64 4.19.1-2.fc39 copr_base 72 k sed x86_64 4.8-14.fc39 fedora 306 k shadow-utils x86_64 2:4.14.0-2.fc39 updates 1.3 M tar x86_64 2:1.35-2.fc39 fedora 864 k unzip x86_64 6.0-62.fc39 fedora 184 k util-linux x86_64 2.39.3-1.fc39 copr_base 1.1 M which x86_64 2.21-40.fc39 fedora 42 k xz x86_64 5.4.4-1.fc39 fedora 556 k Installing dependencies: alternatives x86_64 1.25-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-11.fc39 fedora 21 k audit-libs x86_64 3.1.2-5.fc39 copr_base 117 k authselect x86_64 1.4.3-1.fc39 fedora 149 k authselect-libs x86_64 1.4.3-1.fc39 fedora 249 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils x86_64 2.40-13.fc39 fedora 5.6 M binutils-gold x86_64 2.40-13.fc39 fedora 797 k bzip2-libs x86_64 1.0.8-16.fc39 fedora 41 k ca-certificates noarch 2023.2.60_v7.0.306-2.fc39 fedora 837 k coreutils-common x86_64 9.3-4.fc39 fedora 2.1 M cracklib x86_64 2.9.11-2.fc39 fedora 94 k crypto-policies noarch 20231204-1.git1e3a2e4.fc39 updates 100 k curl x86_64 8.2.1-4.fc39 updates 345 k cyrus-sasl-lib x86_64 2.1.28-11.fc39 fedora 793 k debugedit x86_64 5.0-12.fc39 updates 79 k dwz x86_64 0.15-3.fc39 fedora 134 k ed x86_64 1.19-4.fc39 fedora 79 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils x86_64 0.190-4.fc39 updates 551 k elfutils-debuginfod-client x86_64 0.190-4.fc39 updates 38 k elfutils-default-yama-scope noarch 0.190-4.fc39 updates 13 k elfutils-libelf x86_64 0.190-4.fc39 updates 194 k elfutils-libs x86_64 0.190-4.fc39 updates 260 k fedora-gpg-keys noarch 39-1 fedora 130 k fedora-release noarch 39-34 updates 8.4 k fedora-release-identity-basic noarch 39-34 updates 9.2 k fedora-repos noarch 39-1 fedora 9.3 k file x86_64 5.45-1.fc39 copr_base 50 k file-libs x86_64 5.45-1.fc39 copr_base 764 k filesystem x86_64 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal x86_64 14.1-1.fc39 updates 4.3 M gdbm-libs x86_64 1:1.23-4.fc39 fedora 56 k ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k glibc x86_64 2.38-14.fc39 updates 2.2 M glibc-common x86_64 2.38-14.fc39 updates 352 k glibc-gconv-extra x86_64 2.38-14.fc39 updates 1.6 M gmp x86_64 1:6.2.1-5.fc39 fedora 313 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.3.1-1.fc39 updates 28 k jansson x86_64 2.13.1-7.fc39 fedora 44 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs x86_64 1.6.1-7.fc39 fedora 31 k krb5-libs x86_64 1.21.2-2.fc39 updates 764 k libacl x86_64 2.3.1-9.fc39 updates 23 k libarchive x86_64 3.7.1-1.fc39 fedora 408 k libattr x86_64 2.5.1-8.fc39 fedora 18 k libblkid x86_64 2.39.3-1.fc39 copr_base 117 k libbrotli x86_64 1.1.0-1.fc39 fedora 336 k libcap x86_64 2.48-9.fc39 updates 68 k libcap-ng x86_64 0.8.4-2.fc39 copr_base 33 k libcom_err x86_64 1.47.0-2.fc39 fedora 26 k libcurl x86_64 8.2.1-4.fc39 updates 323 k libdb x86_64 5.3.28-56.fc39 fedora 760 k libeconf x86_64 0.5.2-1.fc39 fedora 30 k libevent x86_64 2.1.12-9.fc39 fedora 258 k libfdisk x86_64 2.39.3-1.fc39 copr_base 163 k libffi x86_64 3.4.4-4.fc39 fedora 40 k libgcc x86_64 13.2.1-6.fc39 updates 112 k libgomp x86_64 13.2.1-6.fc39 updates 322 k libidn2 x86_64 2.3.4-3.fc39 fedora 117 k libmount x86_64 2.39.3-1.fc39 copr_base 155 k libnghttp2 x86_64 1.55.1-4.fc39 updates 76 k libnsl2 x86_64 2.0.0-6.fc39 fedora 30 k libpkgconf x86_64 1.9.5-2.fc39 fedora 38 k libpsl x86_64 0.21.2-4.fc39 fedora 63 k libpwquality x86_64 1.4.5-7.fc39 copr_base 109 k libselinux x86_64 3.5-5.fc39 copr_base 87 k libsemanage x86_64 3.5-4.fc39 copr_base 120 k libsepol x86_64 3.5-2.fc39 fedora 324 k libsigsegv x86_64 2.14-5.fc39 fedora 27 k libsmartcols x86_64 2.39.3-1.fc39 copr_base 68 k libssh x86_64 0.10.6-2.fc39 updates 212 k libssh-config noarch 0.10.6-2.fc39 updates 9.0 k libstdc++ x86_64 13.2.1-6.fc39 updates 865 k libtasn1 x86_64 4.19.0-3.fc39 fedora 74 k libtirpc x86_64 1.3.4-0.fc39 updates 94 k libunistring x86_64 1.1-5.fc39 fedora 543 k libutempter x86_64 1.2.1-10.fc39 fedora 26 k libuuid x86_64 2.39.3-1.fc39 copr_base 29 k libverto x86_64 0.3.2-6.fc39 fedora 20 k libxcrypt x86_64 4.4.36-2.fc39 fedora 119 k libxml2 x86_64 2.12.3-1.fc39 copr_base 693 k libzstd x86_64 1.5.5-4.fc39 fedora 309 k lua-libs x86_64 5.4.6-3.fc39 fedora 133 k lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k lz4-libs x86_64 1.9.4-4.fc39 fedora 67 k mpfr x86_64 4.2.0-3.fc39 fedora 344 k ncurses-base noarch 6.4-7.20230520.fc39 fedora 88 k ncurses-libs x86_64 6.4-7.20230520.fc39 fedora 336 k ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap x86_64 2.6.6-1.fc39 fedora 255 k openssl-libs x86_64 1:3.1.1-4.fc39 fedora 2.2 M p11-kit x86_64 0.25.3-1.fc39 updates 520 k p11-kit-trust x86_64 0.25.3-1.fc39 updates 140 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam x86_64 1.5.3-3.fc39 updates 542 k pam-libs x86_64 1.5.3-3.fc39 updates 56 k pcre2 x86_64 10.42-1.fc39.2 fedora 233 k pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf x86_64 1.9.5-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.5-2.fc39 fedora 9.6 k popt x86_64 1.19-3.fc39 fedora 66 k publicsuffix-list-dafsa noarch 20230812-1.fc39 fedora 57 k pyproject-srpm-macros noarch 1.11.0-1.fc39 updates 15 k python-srpm-macros noarch 3.12-4.fc39 fedora 25 k qt5-srpm-macros noarch 5.15.11-1.fc39 updates 8.3 k qt6-srpm-macros noarch 6.6.0-1.fc39 updates 8.6 k readline x86_64 8.2-4.fc39 fedora 213 k rpm x86_64 4.19.1-2.fc39 copr_base 513 k rpm-build-libs x86_64 4.19.1-2.fc39 copr_base 97 k rpm-libs x86_64 4.19.1-2.fc39 copr_base 313 k rpm-sequoia x86_64 1.5.0-2.fc39 updates 878 k rpmautospec-rpm-macros noarch 0.4.0-2.fc39 copr_base 9.7 k rust-srpm-macros noarch 25.2-2.fc39 copr_base 13 k setup noarch 2.14.4-1.fc39 fedora 154 k sqlite-libs x86_64 3.42.0-7.fc39 fedora 678 k systemd-libs x86_64 254.7-1.fc39 updates 689 k util-linux-core x86_64 2.39.3-1.fc39 copr_base 493 k xxhash-libs x86_64 0.8.2-1.fc39 fedora 37 k xz-libs x86_64 5.4.4-1.fc39 fedora 108 k zip x86_64 3.0-39.fc39 fedora 266 k zlib x86_64 1.2.13-4.fc39 fedora 94 k zstd x86_64 1.5.5-4.fc39 fedora 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 151 Packages Total download size: 52 M Installed size: 179 M Downloading Packages: (1/151): file-5.45-1.fc39.x86_64.rpm 438 kB/s | 50 kB 00:00 (2/151): audit-libs-3.1.2-5.fc39.x86_64.rpm 838 kB/s | 117 kB 00:00 (3/151): libblkid-2.39.3-1.fc39.x86_64.rpm 2.5 MB/s | 117 kB 00:00 (4/151): file-libs-5.45-1.fc39.x86_64.rpm 4.6 MB/s | 764 kB 00:00 (5/151): libcap-ng-0.8.4-2.fc39.x86_64.rpm 1.1 MB/s | 33 kB 00:00 (6/151): libfdisk-2.39.3-1.fc39.x86_64.rpm 3.9 MB/s | 163 kB 00:00 (7/151): libmount-2.39.3-1.fc39.x86_64.rpm 3.8 MB/s | 155 kB 00:00 (8/151): libpwquality-1.4.5-7.fc39.x86_64.rpm 2.9 MB/s | 109 kB 00:00 (9/151): libsemanage-3.5-4.fc39.x86_64.rpm 4.7 MB/s | 120 kB 00:00 (10/151): libsmartcols-2.39.3-1.fc39.x86_64.rpm 2.7 MB/s | 68 kB 00:00 (11/151): libselinux-3.5-5.fc39.x86_64.rpm 1.7 MB/s | 87 kB 00:00 (12/151): libxml2-2.12.3-1.fc39.x86_64.rpm 16 MB/s | 693 kB 00:00 (13/151): libuuid-2.39.3-1.fc39.x86_64.rpm 616 kB/s | 29 kB 00:00 (14/151): rpm-build-4.19.1-2.fc39.x86_64.rpm 2.3 MB/s | 72 kB 00:00 (15/151): rpm-4.19.1-2.fc39.x86_64.rpm 9.2 MB/s | 513 kB 00:00 (16/151): rpm-build-libs-4.19.1-2.fc39.x86_64.r 2.8 MB/s | 97 kB 00:00 (17/151): rust-srpm-macros-25.2-2.fc39.noarch.r 565 kB/s | 13 kB 00:00 (18/151): rpm-libs-4.19.1-2.fc39.x86_64.rpm 9.7 MB/s | 313 kB 00:00 (19/151): rpmautospec-rpm-macros-0.4.0-2.fc39.n 191 kB/s | 9.7 kB 00:00 (20/151): util-linux-core-2.39.3-1.fc39.x86_64. 7.5 MB/s | 493 kB 00:00 (21/151): util-linux-2.39.3-1.fc39.x86_64.rpm 16 MB/s | 1.1 MB 00:00 (22/151): alternatives-1.25-1.fc39.x86_64.rpm 556 kB/s | 39 kB 00:00 (23/151): ansible-srpm-macros-1-11.fc39.noarch. 474 kB/s | 21 kB 00:00 (24/151): basesystem-11-18.fc39.noarch.rpm 346 kB/s | 7.2 kB 00:00 (25/151): authselect-1.4.3-1.fc39.x86_64.rpm 1.7 MB/s | 149 kB 00:00 (26/151): authselect-libs-1.4.3-1.fc39.x86_64.r 3.2 MB/s | 249 kB 00:00 (27/151): bzip2-1.0.8-16.fc39.x86_64.rpm 3.2 MB/s | 52 kB 00:00 (28/151): bzip2-libs-1.0.8-16.fc39.x86_64.rpm 2.6 MB/s | 41 kB 00:00 (29/151): binutils-gold-2.40-13.fc39.x86_64.rpm 12 MB/s | 797 kB 00:00 (30/151): ca-certificates-2023.2.60_v7.0.306-2. 6.1 MB/s | 837 kB 00:00 (31/151): coreutils-9.3-4.fc39.x86_64.rpm 8.6 MB/s | 1.1 MB 00:00 (32/151): cpio-2.14-4.fc39.x86_64.rpm 11 MB/s | 279 kB 00:00 (33/151): cracklib-2.9.11-2.fc39.x86_64.rpm 5.3 MB/s | 94 kB 00:00 (34/151): cyrus-sasl-lib-2.1.28-11.fc39.x86_64. 15 MB/s | 793 kB 00:00 (35/151): binutils-2.40-13.fc39.x86_64.rpm 14 MB/s | 5.6 MB 00:00 (36/151): diffutils-3.10-3.fc39.x86_64.rpm 3.9 MB/s | 398 kB 00:00 (37/151): dwz-0.15-3.fc39.x86_64.rpm 7.2 MB/s | 134 kB 00:00 (38/151): ed-1.19-4.fc39.x86_64.rpm 4.6 MB/s | 79 kB 00:00 (39/151): efi-srpm-macros-5-9.fc39.noarch.rpm 1.5 MB/s | 22 kB 00:00 (40/151): coreutils-common-9.3-4.fc39.x86_64.rp 9.4 MB/s | 2.1 MB 00:00 (41/151): fedora-repos-39-1.noarch.rpm 651 kB/s | 9.3 kB 00:00 (42/151): fedora-gpg-keys-39-1.noarch.rpm 6.7 MB/s | 130 kB 00:00 (43/151): fonts-srpm-macros-2.0.5-12.fc39.noarc 1.7 MB/s | 26 kB 00:00 (44/151): findutils-4.9.0-5.fc39.x86_64.rpm 16 MB/s | 492 kB 00:00 (45/151): fpc-srpm-macros-1.3-8.fc39.noarch.rpm 519 kB/s | 7.4 kB 00:00 (46/151): gdbm-libs-1.23-4.fc39.x86_64.rpm 3.5 MB/s | 56 kB 00:00 (47/151): ghc-srpm-macros-1.6.1-2.fc39.noarch.r 528 kB/s | 7.8 kB 00:00 (48/151): filesystem-3.18-6.fc39.x86_64.rpm 13 MB/s | 1.1 MB 00:00 (49/151): gawk-5.2.2-2.fc39.x86_64.rpm 23 MB/s | 1.1 MB 00:00 (50/151): gnat-srpm-macros-6-3.fc39.noarch.rpm 623 kB/s | 8.8 kB 00:00 (51/151): gmp-6.2.1-5.fc39.x86_64.rpm 12 MB/s | 313 kB 00:00 (52/151): grep-3.11-3.fc39.x86_64.rpm 13 MB/s | 298 kB 00:00 (53/151): gzip-1.12-6.fc39.x86_64.rpm 6.9 MB/s | 166 kB 00:00 (54/151): info-7.0.3-3.fc39.x86_64.rpm 7.8 MB/s | 182 kB 00:00 (55/151): jansson-2.13.1-7.fc39.x86_64.rpm 2.7 MB/s | 44 kB 00:00 (56/151): kernel-srpm-macros-1.0-20.fc39.noarch 672 kB/s | 10 kB 00:00 (57/151): keyutils-libs-1.6.1-7.fc39.x86_64.rpm 2.0 MB/s | 31 kB 00:00 (58/151): libattr-2.5.1-8.fc39.x86_64.rpm 1.1 MB/s | 18 kB 00:00 (59/151): libarchive-3.7.1-1.fc39.x86_64.rpm 15 MB/s | 408 kB 00:00 (60/151): libbrotli-1.1.0-1.fc39.x86_64.rpm 12 MB/s | 336 kB 00:00 (61/151): libcom_err-1.47.0-2.fc39.x86_64.rpm 1.5 MB/s | 26 kB 00:00 (62/151): libeconf-0.5.2-1.fc39.x86_64.rpm 1.7 MB/s | 30 kB 00:00 (63/151): libdb-5.3.28-56.fc39.x86_64.rpm 20 MB/s | 760 kB 00:00 (64/151): libevent-2.1.12-9.fc39.x86_64.rpm 9.7 MB/s | 258 kB 00:00 (65/151): libffi-3.4.4-4.fc39.x86_64.rpm 2.6 MB/s | 40 kB 00:00 (66/151): libidn2-2.3.4-3.fc39.x86_64.rpm 6.7 MB/s | 117 kB 00:00 (67/151): libnsl2-2.0.0-6.fc39.x86_64.rpm 1.9 MB/s | 30 kB 00:00 (68/151): libpkgconf-1.9.5-2.fc39.x86_64.rpm 2.5 MB/s | 38 kB 00:00 (69/151): libpsl-0.21.2-4.fc39.x86_64.rpm 4.1 MB/s | 63 kB 00:00 (70/151): libsigsegv-2.14-5.fc39.x86_64.rpm 1.8 MB/s | 27 kB 00:00 (71/151): libtasn1-4.19.0-3.fc39.x86_64.rpm 4.6 MB/s | 74 kB 00:00 (72/151): libsepol-3.5-2.fc39.x86_64.rpm 11 MB/s | 324 kB 00:00 (73/151): libutempter-1.2.1-10.fc39.x86_64.rpm 1.8 MB/s | 26 kB 00:00 (74/151): libverto-0.3.2-6.fc39.x86_64.rpm 1.4 MB/s | 20 kB 00:00 (75/151): libunistring-1.1-5.fc39.x86_64.rpm 16 MB/s | 543 kB 00:00 (76/151): libxcrypt-4.4.36-2.fc39.x86_64.rpm 6.8 MB/s | 119 kB 00:00 (77/151): lua-libs-5.4.6-3.fc39.x86_64.rpm 6.3 MB/s | 133 kB 00:00 (78/151): libzstd-1.5.5-4.fc39.x86_64.rpm 9.8 MB/s | 309 kB 00:00 (79/151): lua-srpm-macros-1-9.fc39.noarch.rpm 496 kB/s | 8.6 kB 00:00 (80/151): lz4-libs-1.9.4-4.fc39.x86_64.rpm 3.1 MB/s | 67 kB 00:00 (81/151): ncurses-base-6.4-7.20230520.fc39.noar 4.0 MB/s | 88 kB 00:00 (82/151): mpfr-4.2.0-3.fc39.x86_64.rpm 9.4 MB/s | 344 kB 00:00 (83/151): ocaml-srpm-macros-8-2.fc39.noarch.rpm 665 kB/s | 14 kB 00:00 (84/151): ncurses-libs-6.4-7.20230520.fc39.x86_ 10 MB/s | 336 kB 00:00 (85/151): openblas-srpm-macros-2-14.fc39.noarch 388 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sed-4.8-14.fc39.x86_64.rpm 12 MB/s | 306 kB 00:00 (101/151): setup-2.14.4-1.fc39.noarch.rpm 7.2 MB/s | 154 kB 00:00 (102/151): sqlite-libs-3.42.0-7.fc39.x86_64.rpm 18 MB/s | 678 kB 00:00 (103/151): tar-1.35-2.fc39.x86_64.rpm 16 MB/s | 864 kB 00:00 (104/151): unzip-6.0-62.fc39.x86_64.rpm 8.3 MB/s | 184 kB 00:00 (105/151): xxhash-libs-0.8.2-1.fc39.x86_64.rpm 2.3 MB/s | 37 kB 00:00 (106/151): which-2.21-40.fc39.x86_64.rpm 2.6 MB/s | 42 kB 00:00 (107/151): xz-libs-5.4.4-1.fc39.x86_64.rpm 6.2 MB/s | 108 kB 00:00 (108/151): readline-8.2-4.fc39.x86_64.rpm 1.4 MB/s | 213 kB 00:00 (109/151): xz-5.4.4-1.fc39.x86_64.rpm 15 MB/s | 556 kB 00:00 (110/151): zip-3.0-39.fc39.x86_64.rpm 12 MB/s | 266 kB 00:00 (111/151): zstd-1.5.5-4.fc39.x86_64.rpm 15 MB/s | 482 kB 00:00 (112/151): zlib-1.2.13-4.fc39.x86_64.rpm 1.8 MB/s | 94 kB 00:00 (113/151): crypto-policies-20231204-1.git1e3a2e 309 kB/s | 100 kB 00:00 (114/151): debugedit-5.0-12.fc39.x86_64.rpm 921 kB/s | 79 kB 00:00 (115/151): curl-8.2.1-4.fc39.x86_64.rpm 828 kB/s | 345 kB 00:00 (116/151): elfutils-debuginfod-client-0.190-4.f 635 kB/s | 38 kB 00:00 (117/151): bash-5.2.21-1.fc39.x86_64.rpm 3.2 MB/s | 1.8 MB 00:00 (118/151): elfutils-default-yama-scope-0.190-4. 228 kB/s | 13 kB 00:00 (119/151): elfutils-libelf-0.190-4.fc39.x86_64. 3.2 MB/s | 194 kB 00:00 (120/151): elfutils-0.190-4.fc39.x86_64.rpm 2.7 MB/s | 551 kB 00:00 (121/151): elfutils-libs-0.190-4.fc39.x86_64.rp 3.0 MB/s | 260 kB 00:00 (122/151): fedora-release-39-34.noarch.rpm 151 kB/s | 8.4 kB 00:00 (123/151): fedora-release-common-39-34.noarch.r 334 kB/s | 19 kB 00:00 (124/151): fedora-release-identity-basic-39-34. 164 kB/s | 9.2 kB 00:00 (125/151): glibc-common-2.38-14.fc39.x86_64.rpm 3.6 MB/s | 352 kB 00:00 (126/151): gdb-minimal-14.1-1.fc39.x86_64.rpm 26 MB/s | 4.3 MB 00:00 (127/151): glibc-2.38-14.fc39.x86_64.rpm 12 MB/s | 2.2 MB 00:00 (128/151): glibc-minimal-langpack-2.38-14.fc39. 1.2 MB/s | 70 kB 00:00 (129/151): go-srpm-macros-3.3.1-1.fc39.noarch.r 495 kB/s | 28 kB 00:00 (130/151): krb5-libs-1.21.2-2.fc39.x86_64.rpm 10 MB/s | 764 kB 00:00 (131/151): libacl-2.3.1-9.fc39.x86_64.rpm 412 kB/s | 23 kB 00:00 (132/151): glibc-gconv-extra-2.38-14.fc39.x86_6 8.2 MB/s | 1.6 MB 00:00 (133/151): libcap-2.48-9.fc39.x86_64.rpm 1.1 MB/s | 68 kB 00:00 (134/151): libcurl-8.2.1-4.fc39.x86_64.rpm 5.1 MB/s | 323 kB 00:00 (135/151): libgcc-13.2.1-6.fc39.x86_64.rpm 1.9 MB/s | 112 kB 00:00 (136/151): libgomp-13.2.1-6.fc39.x86_64.rpm 5.3 MB/s | 322 kB 00:00 (137/151): libnghttp2-1.55.1-4.fc39.x86_64.rpm 1.3 MB/s | 76 kB 00:00 (138/151): libssh-0.10.6-2.fc39.x86_64.rpm 3.4 MB/s | 212 kB 00:00 (139/151): libssh-config-0.10.6-2.fc39.noarch.r 162 kB/s | 9.0 kB 00:00 (140/151): libstdc++-13.2.1-6.fc39.x86_64.rpm 12 MB/s | 865 kB 00:00 (141/151): libtirpc-1.3.4-0.fc39.x86_64.rpm 1.6 MB/s | 94 kB 00:00 (142/151): p11-kit-0.25.3-1.fc39.x86_64.rpm 8.0 MB/s | 520 kB 00:00 (143/151): p11-kit-trust-0.25.3-1.fc39.x86_64.r 2.3 MB/s | 140 kB 00:00 (144/151): pam-1.5.3-3.fc39.x86_64.rpm 7.9 MB/s | 542 kB 00:00 (145/151): pam-libs-1.5.3-3.fc39.x86_64.rpm 1.0 MB/s | 56 kB 00:00 (146/151): pyproject-srpm-macros-1.11.0-1.fc39. 263 kB/s | 15 kB 00:00 (147/151): qt5-srpm-macros-5.15.11-1.fc39.noarc 148 kB/s | 8.3 kB 00:00 (148/151): qt6-srpm-macros-6.6.0-1.fc39.noarch. 155 kB/s | 8.6 kB 00:00 (149/151): rpm-sequoia-1.5.0-2.fc39.x86_64.rpm 12 MB/s | 878 kB 00:00 (150/151): systemd-libs-254.7-1.fc39.x86_64.rpm 9.8 MB/s | 689 kB 00:00 (151/151): shadow-utils-4.14.0-2.fc39.x86_64.rp 15 MB/s | 1.3 MB 00:00 -------------------------------------------------------------------------------- Total 17 MB/s | 52 MB 00:03 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-6.fc39.x86_64 1/151 Running scriptlet: libgcc-13.2.1-6.fc39.x86_64 1/151 Installing : crypto-policies-20231204-1.git1e3a2e4.fc39.noarc 2/151 Running scriptlet: crypto-policies-20231204-1.git1e3a2e4.fc39.noarc 2/151 Installing : fedora-release-identity-basic-39-34.noarch 3/151 Installing : fedora-gpg-keys-39-1.noarch 4/151 Installing : fedora-repos-39-1.noarch 5/151 Installing : fedora-release-common-39-34.noarch 6/151 Installing : fedora-release-39-34.noarch 7/151 Installing : setup-2.14.4-1.fc39.noarch 8/151 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.4-1.fc39.noarch 8/151 Installing : filesystem-3.18-6.fc39.x86_64 9/151 Installing : basesystem-11-18.fc39.noarch 10/151 Installing : qt6-srpm-macros-6.6.0-1.fc39.noarch 11/151 Installing : qt5-srpm-macros-5.15.11-1.fc39.noarch 12/151 Installing : libssh-config-0.10.6-2.fc39.noarch 13/151 Installing : publicsuffix-list-dafsa-20230812-1.fc39.noarch 14/151 Installing : pkgconf-m4-1.9.5-2.fc39.noarch 15/151 Installing : perl-srpm-macros-1-51.fc39.noarch 16/151 Installing : pcre2-syntax-10.42-1.fc39.2.noarch 17/151 Installing : package-notes-srpm-macros-0.5-9.fc39.noarch 18/151 Installing : openblas-srpm-macros-2-14.fc39.noarch 19/151 Installing : ocaml-srpm-macros-8-2.fc39.noarch 20/151 Installing : ncurses-base-6.4-7.20230520.fc39.noarch 21/151 Installing : ncurses-libs-6.4-7.20230520.fc39.x86_64 22/151 Installing : bash-5.2.21-1.fc39.x86_64 23/151 Running scriptlet: bash-5.2.21-1.fc39.x86_64 23/151 Installing : glibc-common-2.38-14.fc39.x86_64 24/151 Installing : glibc-gconv-extra-2.38-14.fc39.x86_64 25/151 Running scriptlet: glibc-gconv-extra-2.38-14.fc39.x86_64 25/151 Installing : glibc-minimal-langpack-2.38-14.fc39.x86_64 26/151 Running scriptlet: glibc-2.38-14.fc39.x86_64 27/151 Installing : glibc-2.38-14.fc39.x86_64 27/151 Running scriptlet: glibc-2.38-14.fc39.x86_64 27/151 Installing : zlib-1.2.13-4.fc39.x86_64 28/151 Installing : xz-libs-5.4.4-1.fc39.x86_64 29/151 Installing : bzip2-libs-1.0.8-16.fc39.x86_64 30/151 Installing : libuuid-2.39.3-1.fc39.x86_64 31/151 Installing : libzstd-1.5.5-4.fc39.x86_64 32/151 Installing : elfutils-libelf-0.190-4.fc39.x86_64 33/151 Installing : popt-1.19-3.fc39.x86_64 34/151 Installing : libstdc++-13.2.1-6.fc39.x86_64 35/151 Installing : libblkid-2.39.3-1.fc39.x86_64 36/151 Installing : gmp-1:6.2.1-5.fc39.x86_64 37/151 Installing : libattr-2.5.1-8.fc39.x86_64 38/151 Installing : libacl-2.3.1-9.fc39.x86_64 39/151 Installing : libxcrypt-4.4.36-2.fc39.x86_64 40/151 Installing : readline-8.2-4.fc39.x86_64 41/151 Installing : libcap-2.48-9.fc39.x86_64 42/151 Installing : libeconf-0.5.2-1.fc39.x86_64 43/151 Installing : lz4-libs-1.9.4-4.fc39.x86_64 44/151 Installing : systemd-libs-254.7-1.fc39.x86_64 45/151 Installing : mpfr-4.2.0-3.fc39.x86_64 46/151 Installing : dwz-0.15-3.fc39.x86_64 47/151 Installing : unzip-6.0-62.fc39.x86_64 48/151 Installing : file-libs-5.45-1.fc39.x86_64 49/151 Installing : file-5.45-1.fc39.x86_64 50/151 Installing : libcap-ng-0.8.4-2.fc39.x86_64 51/151 Installing : audit-libs-3.1.2-5.fc39.x86_64 52/151 Installing : pam-libs-1.5.3-3.fc39.x86_64 53/151 Installing : libsmartcols-2.39.3-1.fc39.x86_64 54/151 Installing : alternatives-1.25-1.fc39.x86_64 55/151 Installing : jansson-2.13.1-7.fc39.x86_64 56/151 Installing : libcom_err-1.47.0-2.fc39.x86_64 57/151 Installing : libsepol-3.5-2.fc39.x86_64 58/151 Installing : libtasn1-4.19.0-3.fc39.x86_64 59/151 Installing : libunistring-1.1-5.fc39.x86_64 60/151 Installing : libidn2-2.3.4-3.fc39.x86_64 61/151 Installing : lua-libs-5.4.6-3.fc39.x86_64 62/151 Installing : pcre2-10.42-1.fc39.2.x86_64 63/151 Installing : libselinux-3.5-5.fc39.x86_64 64/151 Installing : sed-4.8-14.fc39.x86_64 65/151 Installing : grep-3.11-3.fc39.x86_64 66/151 Installing : findutils-1:4.9.0-5.fc39.x86_64 67/151 Installing : xz-5.4.4-1.fc39.x86_64 68/151 Installing : libmount-2.39.3-1.fc39.x86_64 69/151 Installing : util-linux-core-2.39.3-1.fc39.x86_64 70/151 Installing : libsemanage-3.5-4.fc39.x86_64 71/151 Installing : shadow-utils-2:4.14.0-2.fc39.x86_64 72/151 Running scriptlet: libutempter-1.2.1-10.fc39.x86_64 73/151 Installing : libutempter-1.2.1-10.fc39.x86_64 73/151 Installing : tar-2:1.35-2.fc39.x86_64 74/151 Installing : libpsl-0.21.2-4.fc39.x86_64 75/151 Installing : zip-3.0-39.fc39.x86_64 76/151 Installing : zstd-1.5.5-4.fc39.x86_64 77/151 Installing : libfdisk-2.39.3-1.fc39.x86_64 78/151 Installing : bzip2-1.0.8-16.fc39.x86_64 79/151 Installing : libxml2-2.12.3-1.fc39.x86_64 80/151 Installing : sqlite-libs-3.42.0-7.fc39.x86_64 81/151 Installing : cpio-2.14-4.fc39.x86_64 82/151 Installing : diffutils-3.10-3.fc39.x86_64 83/151 Installing : ed-1.19-4.fc39.x86_64 84/151 Installing : patch-2.7.6-22.fc39.x86_64 85/151 Installing : gdbm-libs-1:1.23-4.fc39.x86_64 86/151 Installing : cyrus-sasl-lib-2.1.28-11.fc39.x86_64 87/151 Installing : keyutils-libs-1.6.1-7.fc39.x86_64 88/151 Installing : libbrotli-1.1.0-1.fc39.x86_64 89/151 Installing : libdb-5.3.28-56.fc39.x86_64 90/151 Installing : libffi-3.4.4-4.fc39.x86_64 91/151 Installing : p11-kit-0.25.3-1.fc39.x86_64 92/151 Installing : p11-kit-trust-0.25.3-1.fc39.x86_64 93/151 Running scriptlet: p11-kit-trust-0.25.3-1.fc39.x86_64 93/151 Installing : libpkgconf-1.9.5-2.fc39.x86_64 94/151 Installing : pkgconf-1.9.5-2.fc39.x86_64 95/151 Installing : pkgconf-pkg-config-1.9.5-2.fc39.x86_64 96/151 Installing : libsigsegv-2.14-5.fc39.x86_64 97/151 Installing : gawk-5.2.2-2.fc39.x86_64 98/151 Installing : libverto-0.3.2-6.fc39.x86_64 99/151 Installing : xxhash-libs-0.8.2-1.fc39.x86_64 100/151 Installing : libgomp-13.2.1-6.fc39.x86_64 101/151 Installing : libnghttp2-1.55.1-4.fc39.x86_64 102/151 Installing : elfutils-default-yama-scope-0.190-4.fc39.noarch 103/151 Running scriptlet: elfutils-default-yama-scope-0.190-4.fc39.noarch 103/151 Installing : kernel-srpm-macros-1.0-20.fc39.noarch 104/151 Installing : gnat-srpm-macros-6-3.fc39.noarch 105/151 Installing : ghc-srpm-macros-1.6.1-2.fc39.noarch 106/151 Installing : fpc-srpm-macros-1.3-8.fc39.noarch 107/151 Installing : coreutils-common-9.3-4.fc39.x86_64 108/151 Installing : openssl-libs-1:3.1.1-4.fc39.x86_64 109/151 Installing : coreutils-9.3-4.fc39.x86_64 110/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 111/151 Installing : ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 111/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 111/151 Installing : krb5-libs-1.21.2-2.fc39.x86_64 112/151 Installing : libtirpc-1.3.4-0.fc39.x86_64 113/151 Running scriptlet: authselect-libs-1.4.3-1.fc39.x86_64 114/151 Installing : authselect-libs-1.4.3-1.fc39.x86_64 114/151 Installing : gzip-1.12-6.fc39.x86_64 115/151 Installing : cracklib-2.9.11-2.fc39.x86_64 116/151 Installing : libpwquality-1.4.5-7.fc39.x86_64 117/151 Installing : authselect-1.4.3-1.fc39.x86_64 118/151 Installing : libnsl2-2.0.0-6.fc39.x86_64 119/151 Installing : pam-1.5.3-3.fc39.x86_64 120/151 Installing : libssh-0.10.6-2.fc39.x86_64 121/151 Installing : libarchive-3.7.1-1.fc39.x86_64 122/151 Installing : libevent-2.1.12-9.fc39.x86_64 123/151 Installing : openldap-2.6.6-1.fc39.x86_64 124/151 Installing : libcurl-8.2.1-4.fc39.x86_64 125/151 Installing : elfutils-libs-0.190-4.fc39.x86_64 126/151 Installing : elfutils-debuginfod-client-0.190-4.fc39.x86_64 127/151 Installing : binutils-gold-2.40-13.fc39.x86_64 128/151 Running scriptlet: binutils-gold-2.40-13.fc39.x86_64 128/151 Installing : binutils-2.40-13.fc39.x86_64 129/151 Running scriptlet: binutils-2.40-13.fc39.x86_64 129/151 Installing : elfutils-0.190-4.fc39.x86_64 130/151 Installing : gdb-minimal-14.1-1.fc39.x86_64 131/151 Installing : debugedit-5.0-12.fc39.x86_64 132/151 Installing : curl-8.2.1-4.fc39.x86_64 133/151 Installing : rpm-sequoia-1.5.0-2.fc39.x86_64 134/151 Installing : rpm-libs-4.19.1-2.fc39.x86_64 135/151 Running scriptlet: rpm-4.19.1-2.fc39.x86_64 136/151 Installing : rpm-4.19.1-2.fc39.x86_64 136/151 Installing : rpmautospec-rpm-macros-0.4.0-2.fc39.noarch 137/151 Installing : efi-srpm-macros-5-9.fc39.noarch 138/151 Installing : lua-srpm-macros-1-9.fc39.noarch 139/151 Installing : rpm-build-libs-4.19.1-2.fc39.x86_64 140/151 Installing : ansible-srpm-macros-1-11.fc39.noarch 141/151 Installing : rust-srpm-macros-25.2-2.fc39.noarch 142/151 Installing : pyproject-srpm-macros-1.11.0-1.fc39.noarch 143/151 Installing : rpm-build-4.19.1-2.fc39.x86_64 144/151 Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 145/151 Installing : python-srpm-macros-3.12-4.fc39.noarch 146/151 Installing : go-srpm-macros-3.3.1-1.fc39.noarch 147/151 Installing : redhat-rpm-config-262-1.fc39.noarch 148/151 Installing : util-linux-2.39.3-1.fc39.x86_64 149/151 Installing : which-2.21-40.fc39.x86_64 150/151 Installing : info-7.0.3-3.fc39.x86_64 151/151 Running scriptlet: filesystem-3.18-6.fc39.x86_64 151/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 151/151 Running scriptlet: authselect-libs-1.4.3-1.fc39.x86_64 151/151 Running scriptlet: rpm-4.19.1-2.fc39.x86_64 151/151 Running scriptlet: info-7.0.3-3.fc39.x86_64 151/151 Installed: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.21-1.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-4.fc39.x86_64 coreutils-common-9.3-4.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231204-1.git1e3a2e4.fc39.noarch curl-8.2.1-4.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-12.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc39.x86_64 elfutils-debuginfod-client-0.190-4.fc39.x86_64 elfutils-default-yama-scope-0.190-4.fc39.noarch elfutils-libelf-0.190-4.fc39.x86_64 elfutils-libs-0.190-4.fc39.x86_64 fedora-gpg-keys-39-1.noarch fedora-release-39-34.noarch fedora-release-common-39-34.noarch fedora-release-identity-basic-39-34.noarch fedora-repos-39-1.noarch file-5.45-1.fc39.x86_64 file-libs-5.45-1.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-1:4.9.0-5.fc39.x86_64 fonts-srpm-macros-1:2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-14.1-1.fc39.x86_64 gdbm-libs-1:1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-14.fc39.x86_64 glibc-common-2.38-14.fc39.x86_64 glibc-gconv-extra-2.38-14.fc39.x86_64 glibc-minimal-langpack-2.38-14.fc39.x86_64 gmp-1:6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc39.noarch grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-2.fc39.x86_64 libacl-2.3.1-9.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.3-1.fc39.x86_64 libbrotli-1.1.0-1.fc39.x86_64 libcap-2.48-9.fc39.x86_64 libcap-ng-0.8.4-2.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-4.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-1.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.3-1.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-6.fc39.x86_64 libgomp-13.2.1-6.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.3-1.fc39.x86_64 libnghttp2-1.55.1-4.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-7.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.3-1.fc39.x86_64 libssh-0.10.6-2.fc39.x86_64 libssh-config-0.10.6-2.fc39.noarch libstdc++-13.2.1-6.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.4-0.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.3-1.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.12.3-1.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.noarch ncurses-libs-6.4-7.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-1:3.1.1-4.fc39.x86_64 p11-kit-0.25.3-1.fc39.x86_64 p11-kit-trust-0.25.3-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230812-1.fc39.noarch pyproject-srpm-macros-1.11.0-1.fc39.noarch python-srpm-macros-3.12-4.fc39.noarch qt5-srpm-macros-5.15.11-1.fc39.noarch qt6-srpm-macros-6.6.0-1.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.19.1-2.fc39.x86_64 rpm-build-4.19.1-2.fc39.x86_64 rpm-build-libs-4.19.1-2.fc39.x86_64 rpm-libs-4.19.1-2.fc39.x86_64 rpm-sequoia-1.5.0-2.fc39.x86_64 rpmautospec-rpm-macros-0.4.0-2.fc39.noarch rust-srpm-macros-25.2-2.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.7-1.fc39.x86_64 tar-2:1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.3-1.fc39.x86_64 util-linux-core-2.39.3-1.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.21-1.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-4.fc39.x86_64 coreutils-common-9.3-4.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231204-1.git1e3a2e4.fc39.noarch curl-8.2.1-4.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-12.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc39.x86_64 elfutils-debuginfod-client-0.190-4.fc39.x86_64 elfutils-default-yama-scope-0.190-4.fc39.noarch elfutils-libelf-0.190-4.fc39.x86_64 elfutils-libs-0.190-4.fc39.x86_64 fedora-gpg-keys-39-1.noarch fedora-release-39-34.noarch fedora-release-common-39-34.noarch fedora-release-identity-basic-39-34.noarch fedora-repos-39-1.noarch file-5.45-1.fc39.x86_64 file-libs-5.45-1.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-4.9.0-5.fc39.x86_64 fonts-srpm-macros-2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-14.1-1.fc39.x86_64 gdbm-libs-1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-14.fc39.x86_64 glibc-common-2.38-14.fc39.x86_64 glibc-gconv-extra-2.38-14.fc39.x86_64 glibc-minimal-langpack-2.38-14.fc39.x86_64 gmp-6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc39.noarch gpg-pubkey-18b8e74c-62f2920f grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-2.fc39.x86_64 libacl-2.3.1-9.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.3-1.fc39.x86_64 libbrotli-1.1.0-1.fc39.x86_64 libcap-2.48-9.fc39.x86_64 libcap-ng-0.8.4-2.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-4.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-1.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.3-1.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-6.fc39.x86_64 libgomp-13.2.1-6.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.3-1.fc39.x86_64 libnghttp2-1.55.1-4.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-7.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.3-1.fc39.x86_64 libssh-0.10.6-2.fc39.x86_64 libssh-config-0.10.6-2.fc39.noarch libstdc++-13.2.1-6.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.4-0.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.3-1.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.12.3-1.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.noarch ncurses-libs-6.4-7.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-3.1.1-4.fc39.x86_64 p11-kit-0.25.3-1.fc39.x86_64 p11-kit-trust-0.25.3-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230812-1.fc39.noarch pyproject-srpm-macros-1.11.0-1.fc39.noarch python-srpm-macros-3.12-4.fc39.noarch qt5-srpm-macros-5.15.11-1.fc39.noarch qt6-srpm-macros-6.6.0-1.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.19.1-2.fc39.x86_64 rpm-build-4.19.1-2.fc39.x86_64 rpm-build-libs-4.19.1-2.fc39.x86_64 rpm-libs-4.19.1-2.fc39.x86_64 rpm-sequoia-1.5.0-2.fc39.x86_64 rpmautospec-rpm-macros-0.4.0-2.fc39.noarch rust-srpm-macros-25.2-2.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.7-1.fc39.x86_64 tar-1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.3-1.fc39.x86_64 util-linux-core-2.39.3-1.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1704412800 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc39.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1704460428.139735/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1704460428.139735/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1704460428.139735/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-87fdbwij/snakemake/snakemake.spec) Config(child) 1 minutes 38 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-7.32.4-3.fc39.src.rpm) Config(fedora-39-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1704460428.139735/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1704460428.139735/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1704460428.139735/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc39.x86_64 rpm-sequoia-1.5.0-1.fc39.x86_64 python3-dnf-4.18.2-1.fc39.noarch python3-dnf-plugins-core-4.4.4-1.fc39.noarch yum-4.18.2-1.fc39.noarch Finish: chroot init Start: build phase for snakemake-7.32.4-3.fc39.src.rpm Start: build setup for snakemake-7.32.4-3.fc39.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1704412800 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc39.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 26 kB/s | 1.5 kB 00:00 fedora 825 kB/s | 25 kB 00:00 updates 709 kB/s | 22 kB 00:00 Dependencies resolved. =================================================================================================== Package Arch Version Repo Size =================================================================================================== Installing: help2man noarch 1.49.3-3.fc39 fedora 228 k latexmk noarch 4.82-1.fc39 updates 430 k librsvg2-tools x86_64 2.57.1-1.fc39 updates 1.8 M make x86_64 1:4.4.1-2.fc39 fedora 589 k python3-boto3 noarch 1.34.11-2.fc39 copr_base 338 k python3-configargparse noarch 1.7-1.fc39 fedora 52 k python3-devel x86_64 3.12.1-2.fc39 updates 312 k python3-pandas x86_64 1.5.3-7.fc39~bootstrap fedora 7.3 M python3-pytest noarch 7.4.3-1.fc39 copr_base 1.8 M python3-requests-mock noarch 1.10.0-5.fc39 fedora 61 k python3-sphinx-latex noarch 1:7.2.6-3.fc39 copr_base 11 k texlive-xetex x86_64 11:svn66203-77.fc39 fedora 1.3 M texlive-xindy x86_64 11:svn65958-77.fc39 fedora 1.7 M vim-filesystem noarch 2:9.0.2167-1.fc39 updates 18 k Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k adobe-mappings-cmap noarch 20230622-1.fc39 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20230622-1.fc39 fedora 113 k adobe-mappings-pdf noarch 20190401-5.fc39 fedora 698 k at-spi2-core x86_64 2.50.0-1.fc39 fedora 370 k atk x86_64 2.50.0-1.fc39 fedora 81 k avahi-libs x86_64 0.8-24.fc39 fedora 67 k biber noarch 2.19-3.fc39 fedora 292 k cairo x86_64 1.18.0-1.fc39 fedora 710 k cairo-gobject x86_64 1.18.0-1.fc39 fedora 19 k clisp x86_64 2.49.93-34.20230718git6692497.fc39 fedora 6.1 M cups-libs x86_64 1:2.4.7-5.fc39 updates 268 k dbus x86_64 1:1.14.10-1.fc39 fedora 8.1 k dbus-broker x86_64 35-2.fc39 updates 176 k dbus-common noarch 1:1.14.10-1.fc39 fedora 15 k dbus-libs x86_64 1:1.14.10-1.fc39 fedora 156 k default-fonts-core-sans noarch 4.0-9.fc39 fedora 32 k desktop-file-utils x86_64 0.26-9.fc39 fedora 72 k emacs-filesystem noarch 1:29.1-2.fc39 fedora 7.1 k expat x86_64 2.5.0-3.fc39 fedora 110 k fcgi x86_64 2.4.0-47.fc39 fedora 46 k ffcall x86_64 2.4-6.fc39 fedora 36 k flexiblas x86_64 3.3.1-5.fc39 fedora 33 k flexiblas-netlib x86_64 3.3.1-5.fc39 fedora 3.1 M flexiblas-openblas-openmp x86_64 3.3.1-5.fc39 fedora 17 k fontconfig x86_64 2.14.2-5.fc39 fedora 297 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freetype x86_64 2.13.1-2.fc39 fedora 414 k fribidi x86_64 1.0.13-2.fc39 fedora 91 k gc x86_64 8.2.2-4.fc39 fedora 110 k gd x86_64 2.3.3-12.fc39 fedora 139 k gdk-pixbuf2 x86_64 2.42.10-5.fc39 fedora 484 k gdk-pixbuf2-modules x86_64 2.42.10-5.fc39 fedora 85 k ghostscript x86_64 10.02.1-2.fc39 updates 37 k ghostscript-tools-fonts x86_64 10.02.1-2.fc39 updates 12 k ghostscript-tools-printing x86_64 10.02.1-2.fc39 updates 13 k giflib x86_64 5.2.1-17.fc39 fedora 51 k glib2 x86_64 2.78.3-1.fc39 updates 2.8 M gnutls x86_64 3.8.2-2.fc39 updates 1.1 M google-droid-sans-fonts noarch 20200215-17.fc39 fedora 2.7 M google-noto-fonts-common noarch 20230801-4.fc39 updates 17 k google-noto-sans-vf-fonts noarch 20230801-4.fc39 updates 583 k graphite2 x86_64 1.3.14-12.fc39 fedora 95 k groff-base x86_64 1.23.0-3.fc39 updates 1.1 M gtk-update-icon-cache x86_64 3.24.39-1.fc39 updates 34 k gtk2 x86_64 2.24.33-15.fc39 fedora 3.3 M guile22 x86_64 2.2.7-9.fc39 fedora 6.5 M gumbo-parser x86_64 1:0.10.1-29.fc39 copr_base 136 k harfbuzz x86_64 8.2.1-2.fc39 fedora 975 k hicolor-icon-theme noarch 0.17-16.fc39 fedora 66 k highway x86_64 1.0.7-1.fc39 fedora 478 k hwdata noarch 0.377-2.fc39 updates 1.6 M jbig2dec-libs x86_64 0.19-10.fc39 fedora 73 k jbigkit-libs x86_64 2.1-26.fc39 fedora 53 k lcms2 x86_64 2.15-2.fc39 fedora 177 k leptonica x86_64 1.83.1-2.fc39 fedora 1.1 M libICE x86_64 1.0.10-11.fc39 fedora 70 k libSM x86_64 1.2.3-13.fc39 fedora 41 k libX11 x86_64 1.8.7-1.fc39 fedora 650 k libX11-common noarch 1.8.7-1.fc39 fedora 176 k libX11-xcb x86_64 1.8.7-1.fc39 fedora 12 k libXau x86_64 1.0.11-3.fc39 fedora 31 k libXaw x86_64 1.0.14-5.fc39 fedora 202 k libXcomposite x86_64 0.4.5-10.fc39 fedora 23 k libXcursor x86_64 1.2.1-4.fc39 fedora 30 k libXdamage x86_64 1.1.5-10.fc39 fedora 22 k libXext x86_64 1.3.5-3.fc39 fedora 39 k libXfixes x86_64 6.0.0-6.fc39 fedora 19 k libXft x86_64 2.3.8-3.fc39 fedora 72 k libXi x86_64 1.8.1-2.fc39 fedora 40 k libXinerama x86_64 1.1.5-3.fc39 fedora 14 k libXmu x86_64 1.1.4-3.fc39 fedora 76 k libXpm x86_64 3.5.17-1.fc39 updates 65 k libXrandr x86_64 1.5.4-1.fc39 updates 27 k libXrender x86_64 0.9.11-3.fc39 fedora 27 k libXt x86_64 1.2.1-5.fc39 fedora 178 k libXtst x86_64 1.2.4-3.fc39 fedora 20 k libXxf86vm x86_64 1.1.5-3.fc39 fedora 18 k libaom x86_64 3.8.0-1.fc39 updates 1.8 M libavif x86_64 0.11.1-11.fc39 fedora 84 k libb2 x86_64 0.98.1-9.fc39 fedora 25 k libdatrie x86_64 0.2.13-7.fc39 fedora 32 k libdav1d x86_64 1.2.1-2.fc39 fedora 618 k libdrm x86_64 2.4.117-1.fc39 updates 156 k libgfortran x86_64 13.2.1-6.fc39 updates 907 k libglade2 x86_64 2.6.4-30.fc39 fedora 61 k libglvnd x86_64 1:1.7.0-1.fc39 fedora 133 k libglvnd-glx x86_64 1:1.7.0-1.fc39 fedora 142 k libgs x86_64 10.02.1-2.fc39 updates 3.4 M libicu x86_64 73.2-2.fc39 fedora 11 M libijs x86_64 0.35-19.fc39 fedora 29 k libimagequant x86_64 4.0.3-2.fc39 updates 318 k libjpeg-turbo x86_64 2.1.4-3.fc39 fedora 183 k libjxl x86_64 1:0.8.2-3.fc39 fedora 1.2 M liblerc x86_64 4.0.0-4.fc39 fedora 201 k libpaper x86_64 1:2.1.1-1.fc39 fedora 27 k libpciaccess x86_64 0.16-9.fc39 fedora 26 k libpng x86_64 2:1.6.37-15.fc39 fedora 119 k libpq x86_64 15.3-1.fc39 fedora 215 k libquadmath x86_64 13.2.1-6.fc39 updates 197 k librsvg2 x86_64 2.57.1-1.fc39 updates 1.6 M libsvm x86_64 3.32-2.fc39 copr_base 332 k libthai x86_64 0.1.29-6.fc39 fedora 213 k libtiff x86_64 4.4.0-8.fc39 fedora 202 k libtool-ltdl x86_64 2.4.7-7.fc39 fedora 36 k libvmaf x86_64 2.3.0-6.fc39 fedora 180 k libwebp x86_64 1.3.2-2.fc39 fedora 284 k libxcb x86_64 1.13.1-12.fc39 fedora 233 k libxshmfence x86_64 1.3-13.fc39 fedora 12 k libxslt x86_64 1.1.39-1.fc39 updates 187 k mailcap noarch 2.1.54-2.fc39 fedora 34 k mesa-libGL x86_64 23.3.1-4.fc39 updates 176 k mesa-libglapi x86_64 23.3.1-4.fc39 updates 52 k mpdecimal x86_64 2.5.1-7.fc39 fedora 89 k mupdf x86_64 1.22.2-3.fc39 fedora 11 M ncurses x86_64 6.4-7.20230520.fc39 fedora 416 k nettle x86_64 3.9.1-2.fc39 fedora 425 k openblas x86_64 0.3.21-6.fc39 fedora 35 k openblas-openmp x86_64 0.3.21-6.fc39 fedora 4.9 M openjpeg2 x86_64 2.5.0-5.fc39 fedora 178 k pango x86_64 1.51.0-1.fc39 fedora 343 k pari x86_64 2.15.4-2.fc39 fedora 3.8 M perl-Authen-SASL noarch 2.1700-1.fc39 fedora 62 k perl-AutoLoader noarch 5.74-502.fc39 updates 21 k perl-B x86_64 1.88-502.fc39 updates 177 k perl-B-Hooks-EndOfScope noarch 0.26-7.fc39 fedora 43 k perl-Business-ISBN noarch 3.008-2.fc39 fedora 32 k perl-Business-ISBN-Data noarch 20230926.001-1.fc39 updates 38 k perl-Business-ISMN noarch 1.203-2.fc39 fedora 25 k perl-Business-ISSN noarch 1.005-8.fc39 fedora 18 k perl-Carp noarch 1.54-500.fc39 fedora 29 k perl-Class-Accessor noarch 0.51-18.fc39 fedora 28 k perl-Class-Data-Inheritable noarch 0.09-6.fc39 fedora 13 k perl-Class-Inspector noarch 1.36-14.fc39 fedora 30 k perl-Class-Method-Modifiers noarch 2.15-2.fc39 fedora 50 k perl-Class-Singleton noarch 1.6-9.fc39 fedora 25 k perl-Class-Struct noarch 0.68-502.fc39 updates 22 k perl-Clone x86_64 0.46-4.fc39 fedora 22 k perl-Compress-Raw-Bzip2 x86_64 2.206-1.fc39 fedora 35 k perl-Compress-Raw-Zlib x86_64 2.206-1.fc39 fedora 64 k perl-Convert-ASN1 noarch 0.34-1.fc39 fedora 59 k perl-Data-Compare noarch 1.29-2.fc39 fedora 34 k perl-Data-Dump noarch 1.25-8.fc39 fedora 32 k perl-Data-Dumper x86_64 2.188-501.fc39 fedora 56 k perl-Data-OptList noarch 0.114-2.fc39 fedora 27 k perl-Data-Uniqid noarch 0.12-31.fc39 fedora 12 k perl-Date-ISO8601 noarch 0.005-18.fc39 fedora 19 k perl-Date-Manip noarch 6.93-1.fc39 updates 1.1 M perl-DateTime x86_64 2:1.59-5.fc39 fedora 132 k perl-DateTime-Calendar-Julian noarch 0.107-5.fc39 fedora 23 k perl-DateTime-Format-Builder noarch 0.8300-11.fc39 fedora 93 k perl-DateTime-Format-Strptime noarch 1:1.79-8.fc39 fedora 41 k perl-DateTime-Locale noarch 1.39-2.fc39 fedora 3.7 M perl-DateTime-TimeZone noarch 2.60-4.fc39 fedora 397 k perl-DateTime-TimeZone-SystemV noarch 0.010-19.fc39 fedora 22 k perl-DateTime-TimeZone-Tzfile noarch 0.011-19.fc39 fedora 19 k perl-Devel-CallChecker x86_64 0.009-3.fc39 fedora 24 k perl-Devel-Caller x86_64 2.07-3.fc39 fedora 19 k perl-Devel-GlobalDestruction noarch 0.14-22.fc39 fedora 17 k perl-Devel-LexAlias x86_64 0.05-34.fc39 fedora 16 k perl-Devel-StackTrace noarch 1:2.04-16.fc39 fedora 30 k perl-Digest noarch 1.20-500.fc39 fedora 25 k perl-Digest-HMAC noarch 1.04-8.fc39 fedora 22 k perl-Digest-MD5 x86_64 2.58-500.fc39 fedora 35 k perl-Digest-SHA x86_64 1:6.04-501.fc39 fedora 61 k perl-Dist-CheckConflicts noarch 0.11-28.fc39 fedora 23 k perl-DynaLoader x86_64 1.54-502.fc39 updates 26 k perl-DynaLoader-Functions noarch 0.004-2.fc39 fedora 19 k perl-Email-Date-Format noarch 1.008-2.fc39 fedora 18 k perl-Encode 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19 k texlive-ifmtarg noarch 11:svn47544-69.fc39 fedora 15 k texlive-ifplatform noarch 11:svn45533-69.fc39 fedora 16 k texlive-iftex noarch 11:svn61910-69.fc39 fedora 21 k texlive-index noarch 11:svn24099.4.1beta-69.fc39 fedora 23 k texlive-infwarerr noarch 11:svn53023-69.fc39 fedora 295 k texlive-intcalc noarch 11:svn53168-69.fc39 fedora 432 k texlive-kastrup noarch 11:svn15878.0-69.fc39 fedora 13 k texlive-knuth-lib noarch 11:svn57963-69.fc39 fedora 52 k texlive-knuth-local noarch 11:svn57963-69.fc39 fedora 45 k texlive-koma-script noarch 11:svn64685-69.fc39 fedora 6.4 M texlive-kpathsea x86_64 11:svn66209-77.fc39 fedora 1.1 M texlive-kvdefinekeys noarch 11:svn53193-69.fc39 fedora 306 k texlive-kvoptions noarch 11:svn63622-69.fc39 fedora 494 k texlive-kvsetkeys noarch 11:svn64632-69.fc39 fedora 398 k texlive-l3backend noarch 11:svn65573-69.fc39 fedora 897 k texlive-l3kernel noarch 11:svn66094-69.fc39 fedora 202 k texlive-l3packages noarch 11:svn65722-69.fc39 fedora 41 k texlive-latex noarch 11:svn65161-77.fc39 fedora 30 M texlive-latex-fonts noarch 11:svn28888.0-69.fc39 fedora 50 k texlive-latex-lab noarch 11:svn64892-69.fc39 fedora 1.8 M texlive-latexconfig noarch 11:svn53525-69.fc39 fedora 15 k texlive-letltxmacro noarch 11:svn53022-69.fc39 fedora 300 k texlive-lib x86_64 11:20230311-77.fc39 fedora 492 k texlive-listings noarch 11:svn66222-69.fc39 fedora 167 k texlive-lm noarch 11:svn65956-69.fc39 fedora 12 M texlive-lm-math noarch 11:svn36915.1.959-69.fc39 fedora 447 k texlive-logreq noarch 11:svn53003-69.fc39 fedora 20 k texlive-ltxcmds noarch 11:svn56421-69.fc39 fedora 400 k texlive-ltxmisc noarch 11:svn21927.0-69.fc39 fedora 28 k texlive-lua-alt-getopt noarch 11:svn56414-69.fc39 fedora 13 k texlive-lua-uni-algos noarch 11:svn62204-69.fc39 fedora 97 k texlive-luabidi noarch 11:svn54512-69.fc39 fedora 20 k texlive-luahbtex x86_64 11:svn66186-77.fc39 fedora 2.0 M texlive-lualatex-math noarch 11:svn61464-69.fc39 fedora 20 k texlive-lualibs noarch 11:svn64615-69.fc39 fedora 160 k texlive-luaotfload noarch 11:svn64616-77.fc39 fedora 1.2 M texlive-luatex x86_64 11:svn66967-77.fc39 fedora 3.9 M texlive-luatex85 noarch 11:svn41456-69.fc39 fedora 19 k texlive-luatexbase noarch 11:svn52663-69.fc39 fedora 16 k texlive-makecmds noarch 11:svn15878.0-69.fc39 fedora 15 k texlive-makeindex x86_64 11:svn62517-77.fc39 fedora 436 k texlive-manfnt-font noarch 11:svn45777-69.fc39 fedora 37 k texlive-marginnote noarch 11:svn48383-69.fc39 fedora 17 k texlive-marvosym noarch 11:svn29349.2.2a-69.fc39 fedora 146 k texlive-mathpazo noarch 11:svn52663-69.fc39 fedora 90 k texlive-memoir noarch 11:svn65040-69.fc39 fedora 94 k texlive-metafont x86_64 11:svn66186-77.fc39 fedora 268 k texlive-mflogo noarch 11:svn42428-69.fc39 fedora 16 k texlive-mflogo-font noarch 11:svn54512-69.fc39 fedora 32 k texlive-mfnfss noarch 11:svn46036-69.fc39 fedora 17 k texlive-mfware x86_64 11:svn66186-77.fc39 fedora 101 k texlive-minitoc noarch 11:svn61719-69.fc39 fedora 122 k texlive-modes noarch 11:svn61719-69.fc39 fedora 306 k texlive-mparhack noarch 11:svn59066-69.fc39 fedora 18 k texlive-mptopdf noarch 11:svn65952-77.fc39 fedora 52 k texlive-ms noarch 11:svn57473-69.fc39 fedora 17 k texlive-multido noarch 11:svn18302.1.42-69.fc39 fedora 18 k texlive-natbib noarch 11:svn20668.8.31b-69.fc39 fedora 31 k texlive-ncntrsbk noarch 11:svn61719-69.fc39 fedora 363 k texlive-needspace noarch 11:svn29601.1.3d-69.fc39 fedora 15 k texlive-notoccite noarch 11:svn18129.0-69.fc39 fedora 13 k texlive-oberdiek noarch 11:svn65521-77.fc39 fedora 7.7 M texlive-pagesel noarch 11:svn56105-69.fc39 fedora 340 k texlive-palatino noarch 11:svn61719-69.fc39 fedora 423 k texlive-paralist noarch 11:svn43021-69.fc39 fedora 18 k texlive-parallel noarch 11:svn15878.0-69.fc39 fedora 18 k texlive-parskip noarch 11:svn58358-69.fc39 fedora 17 k texlive-pdfcol noarch 11:svn64469-69.fc39 fedora 327 k texlive-pdfcolmk noarch 11:svn52912-69.fc39 fedora 18 k texlive-pdfescape noarch 11:svn53082-69.fc39 fedora 353 k texlive-pdftex x86_64 11:svn66243-77.fc39 fedora 2.5 M texlive-pdftexcmds noarch 11:svn55777-69.fc39 fedora 391 k texlive-pgf noarch 11:svn65553-69.fc39 fedora 897 k texlive-picture noarch 11:svn54867-69.fc39 fedora 312 k texlive-placeins noarch 11:svn19848.2.2-69.fc39 fedora 13 k texlive-plain noarch 11:svn57963-69.fc39 fedora 48 k texlive-polyglossia noarch 11:svn65792-69.fc39 fedora 220 k texlive-pslatex noarch 11:svn57434-69.fc39 fedora 22 k texlive-psnfss noarch 11:svn54694-69.fc39 fedora 60 k texlive-pspicture noarch 11:svn15878.0-69.fc39 fedora 16 k texlive-pst-3d noarch 11:svn17257.1.10-69.fc39 fedora 18 k texlive-pst-coil noarch 11:svn62977-69.fc39 fedora 18 k texlive-pst-eps noarch 11:svn15878.1.0-69.fc39 fedora 17 k texlive-pst-fill noarch 11:svn60671-69.fc39 fedora 18 k texlive-pst-grad noarch 11:svn15878.1.06-69.fc39 fedora 18 k texlive-pst-math noarch 11:svn64732-69.fc39 fedora 20 k texlive-pst-node noarch 11:svn61838-69.fc39 fedora 40 k texlive-pst-ovl noarch 11:svn54963-69.fc39 fedora 16 k texlive-pst-plot noarch 11:svn65346-69.fc39 fedora 37 k texlive-pst-text noarch 11:svn49542-69.fc39 fedora 19 k texlive-pst-tools noarch 11:svn60621-69.fc39 fedora 21 k texlive-pst-tree noarch 11:svn60421-69.fc39 fedora 21 k texlive-pstricks noarch 11:svn65346-69.fc39 fedora 117 k texlive-pstricks-add noarch 11:svn65067-69.fc39 fedora 37 k texlive-pxfonts noarch 11:svn15878.0-69.fc39 fedora 523 k texlive-ragged2e noarch 11:svn66152-69.fc39 fedora 682 k texlive-refcount noarch 11:svn53164-69.fc39 fedora 335 k texlive-rerunfilecheck noarch 11:svn63869-69.fc39 fedora 341 k texlive-rsfs noarch 11:svn15878.0-69.fc39 fedora 73 k texlive-sauerj noarch 11:svn15878.0-69.fc39 fedora 20 k texlive-setspace noarch 11:svn65206-69.fc39 fedora 18 k texlive-showexpl noarch 11:svn57414-69.fc39 fedora 18 k texlive-stringenc noarch 11:svn52982-69.fc39 fedora 702 k texlive-subfig noarch 11:svn15878.1.3-69.fc39 fedora 21 k texlive-symbol noarch 11:svn61719-69.fc39 fedora 54 k texlive-tabulary noarch 11:svn34368.0.10-69.fc39 fedora 18 k texlive-tex x86_64 11:svn66186-77.fc39 fedora 212 k texlive-tex-gyre noarch 11:svn65956-69.fc39 fedora 8.0 M texlive-tex-gyre-math noarch 11:svn41264-69.fc39 fedora 1.4 M texlive-tex-ini-files noarch 11:svn40533-69.fc39 fedora 15 k texlive-texlive-common-doc noarch 11:svn54176-69.fc39 fedora 158 k texlive-texlive-en noarch 11:svn66572-77.fc39 fedora 2.0 M texlive-texlive-msg-translations noarch 11:svn66593-69.fc39 fedora 165 k texlive-texlive-scripts noarch 11:svn66584-77.fc39 fedora 122 k texlive-texlive.infra noarch 11:svn66512-77.fc39 fedora 295 k texlive-times noarch 11:svn61719-69.fc39 fedora 368 k texlive-tipa noarch 11:svn29349.1.3-69.fc39 fedora 2.8 M texlive-titlesec noarch 11:svn59845-69.fc39 fedora 34 k texlive-tools noarch 11:svn64892-69.fc39 fedora 75 k texlive-txfonts noarch 11:svn15878.0-69.fc39 fedora 816 k texlive-ucharcat noarch 11:svn38907-69.fc39 fedora 15 k texlive-ucs noarch 11:svn64114-69.fc39 fedora 423 k texlive-underscore noarch 11:svn18261.0-69.fc39 fedora 19 k texlive-unicode-data noarch 11:svn64423-69.fc39 fedora 371 k texlive-unicode-math noarch 11:svn61719-69.fc39 fedora 63 k texlive-uniquecounter noarch 11:svn53162-69.fc39 fedora 300 k texlive-upquote noarch 11:svn26059.v1.3-69.fc39 fedora 17 k texlive-url noarch 11:svn32528.3.4-69.fc39 fedora 20 k texlive-utopia noarch 11:svn15878.0-69.fc39 fedora 239 k texlive-varwidth noarch 11:svn24104.0.92-69.fc39 fedora 18 k texlive-wasy noarch 11:svn53533-69.fc39 fedora 44 k texlive-wasy-type1 noarch 11:svn53534-69.fc39 fedora 272 k texlive-wasysym noarch 11:svn54080-69.fc39 fedora 18 k texlive-wrapfig noarch 11:svn61719-69.fc39 fedora 23 k texlive-xcolor noarch 11:svn63563-69.fc39 fedora 32 k texlive-xdvi x86_64 11:svn62387-77.fc39 fedora 351 k texlive-xetexconfig noarch 11:svn45845-69.fc39 fedora 11 k texlive-xifthen noarch 11:svn38929-69.fc39 fedora 16 k texlive-xkeyval noarch 11:svn63616-69.fc39 fedora 27 k texlive-xpatch noarch 11:svn54563-69.fc39 fedora 19 k texlive-xstring noarch 11:svn65551-69.fc39 fedora 25 k texlive-xunicode noarch 11:svn30466.0.981-69.fc39 fedora 44 k texlive-zapfchan noarch 11:svn61719-69.fc39 fedora 109 k texlive-zapfding noarch 11:svn61719-69.fc39 fedora 64 k texlive-zref noarch 11:svn62977-69.fc39 fedora 688 k tzdata noarch 2023c-2.fc39 fedora 717 k urw-base35-bookman-fonts noarch 20200910-18.fc39 fedora 847 k urw-base35-c059-fonts noarch 20200910-18.fc39 fedora 874 k urw-base35-d050000l-fonts noarch 20200910-18.fc39 fedora 76 k urw-base35-fonts noarch 20200910-18.fc39 fedora 10 k urw-base35-fonts-common noarch 20200910-18.fc39 fedora 21 k urw-base35-gothic-fonts noarch 20200910-18.fc39 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-18.fc39 fedora 795 k urw-base35-nimbus-roman-fonts noarch 20200910-18.fc39 fedora 856 k urw-base35-nimbus-sans-fonts noarch 20200910-18.fc39 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-18.fc39 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-18.fc39 fedora 42 k urw-base35-z003-fonts noarch 20200910-18.fc39 fedora 276 k xdg-utils noarch 1.1.3-15.fc39 fedora 77 k xml-common noarch 0.6.3-61.fc39 fedora 31 k xpdf-libs x86_64 1:4.04-10.fc39 fedora 647 k xprop x86_64 1.2.5-4.fc39 fedora 35 k zziplib x86_64 0.13.72-5.fc39 fedora 86 k Transaction Summary =================================================================================================== Install 669 Packages Total download size: 379 M Installed size: 1.2 G Downloading Packages: (1/669): gumbo-parser-0.10.1-29.fc39.x86_64.rpm 1.4 MB/s | 136 kB 00:00 (2/669): libsvm-3.32-2.fc39.x86_64.rpm 2.8 MB/s | 332 kB 00:00 (3/669): python-pip-wheel-23.3.1-2.fc39.noarch. 11 MB/s | 1.5 MB 00:00 (4/669): python3-boto3-1.34.11-2.fc39.noarch.rp 4.9 MB/s | 338 kB 00:00 (5/669): python3-charset-normalizer-3.3.2-1.fc3 955 kB/s | 99 kB 00:00 (6/669): python3-babel-2.13.1-1.fc39.noarch.rpm 27 MB/s | 6.8 MB 00:00 (7/669): python3-botocore-1.34.12-1.fc39.noarch 24 MB/s | 6.6 MB 00:00 (8/669): python3-dateutil-2.8.2-11.fc39.noarch. 2.7 MB/s | 345 kB 00:00 (9/669): python3-docutils-0.20.1-1.fc39.noarch. 12 MB/s | 995 kB 00:00 (10/669): python3-jinja2-3.1.2-5.fc39.noarch.rp 10 MB/s | 483 kB 00:00 (11/669): python3-packaging-23.2-2.fc39.noarch. 2.0 MB/s | 116 kB 00:00 (12/669): python3-numpy-1.26.2-1.fc39.x86_64.rp 48 MB/s | 7.2 MB 00:00 (13/669): python3-pluggy-1.3.0-1.fc39.noarch.rp 466 kB/s | 50 kB 00:00 (14/669): python3-pygments-2.17.2-1.fc39.noarch 23 MB/s | 2.3 MB 00:00 (15/669): python3-requests-2.28.2-7.fc39.noarch 3.8 MB/s | 142 kB 00:00 (16/669): python3-s3transfer-0.10.0-1.fc39.noar 4.1 MB/s | 143 kB 00:00 (17/669): python3-pytest-7.4.3-1.fc39.noarch.rp 23 MB/s | 1.8 MB 00:00 (18/669): python3-setuptools-68.2.2-1.fc39.noar 23 MB/s | 1.4 MB 00:00 (19/669): python3-six-1.16.0-12.fc39.noarch.rpm 472 kB/s | 41 kB 00:00 (20/669): python3-sphinx-7.2.6-3.fc39.noarch.rp 38 MB/s | 2.5 MB 00:00 (21/669): python3-sphinx-latex-7.2.6-3.fc39.noa 249 kB/s | 11 kB 00:00 (22/669): python3-sphinx-theme-alabaster-0.7.13 1.0 MB/s | 25 kB 00:00 (23/669): python3-urllib3-1.26.18-1.fc39.noarch 7.9 MB/s | 254 kB 00:00 (24/669): adobe-mappings-cmap-deprecated-202306 1.0 MB/s | 113 kB 00:00 (25/669): adobe-mappings-pdf-20190401-5.fc39.no 13 MB/s | 698 kB 00:00 (26/669): adobe-mappings-cmap-20230622-1.fc39.n 12 MB/s | 2.1 MB 00:00 (27/669): at-spi2-core-2.50.0-1.fc39.x86_64.rpm 18 MB/s | 370 kB 00:00 (28/669): atk-2.50.0-1.fc39.x86_64.rpm 4.8 MB/s | 81 kB 00:00 (29/669): avahi-libs-0.8-24.fc39.x86_64.rpm 4.0 MB/s | 67 kB 00:00 (30/669): cairo-1.18.0-1.fc39.x86_64.rpm 20 MB/s | 710 kB 00:00 (31/669): biber-2.19-3.fc39.noarch.rpm 6.0 MB/s | 292 kB 00:00 (32/669): cairo-gobject-1.18.0-1.fc39.x86_64.rp 1.1 MB/s | 19 kB 00:00 (33/669): dbus-1.14.10-1.fc39.x86_64.rpm 481 kB/s | 8.1 kB 00:00 (34/669): dbus-common-1.14.10-1.fc39.noarch.rpm 965 kB/s | 15 kB 00:00 (35/669): dbus-libs-1.14.10-1.fc39.x86_64.rpm 4.6 MB/s | 156 kB 00:00 (36/669): abattis-cantarell-vf-fonts-0.301-10.f 343 kB/s | 121 kB 00:00 (37/669): default-fonts-core-sans-4.0-9.fc39.no 738 kB/s | 32 kB 00:00 (38/669): desktop-file-utils-0.26-9.fc39.x86_64 1.6 MB/s | 72 kB 00:00 (39/669): clisp-2.49.93-34.20230718git6692497.f 41 MB/s | 6.1 MB 00:00 (40/669): emacs-filesystem-29.1-2.fc39.noarch.r 229 kB/s | 7.1 kB 00:00 (41/669): expat-2.5.0-3.fc39.x86_64.rpm 3.5 MB/s | 110 kB 00:00 (42/669): fcgi-2.4.0-47.fc39.x86_64.rpm 1.8 MB/s | 46 kB 00:00 (43/669): ffcall-2.4-6.fc39.x86_64.rpm 1.5 MB/s | 36 kB 00:00 (44/669): flexiblas-3.3.1-5.fc39.x86_64.rpm 1.5 MB/s | 33 kB 00:00 (45/669): fontconfig-2.14.2-5.fc39.x86_64.rpm 6.5 MB/s | 297 kB 00:00 (46/669): flexiblas-openblas-openmp-3.3.1-5.fc3 373 kB/s | 17 kB 00:00 (47/669): flexiblas-netlib-3.3.1-5.fc39.x86_64. 49 MB/s | 3.1 MB 00:00 (48/669): fonts-filesystem-2.0.5-12.fc39.noarch 358 kB/s | 8.2 kB 00:00 (49/669): fribidi-1.0.13-2.fc39.x86_64.rpm 3.8 MB/s | 91 kB 00:00 (50/669): 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perl-SelectSaver-1.02-502.fc39.noarc 1.3 MB/s | 12 kB 00:00 (644/669): perl-Safe-2.44-502.fc39.noarch.rpm 2.4 MB/s | 25 kB 00:00 (645/669): perl-Symbol-1.09-502.fc39.noarch.rpm 1.5 MB/s | 14 kB 00:00 (646/669): perl-Sys-Hostname-1.25-502.fc39.x86_ 1.9 MB/s | 17 kB 00:00 (647/669): perl-Tie-4.6-502.fc39.noarch.rpm 3.0 MB/s | 28 kB 00:00 (648/669): perl-Unicode-UCD-0.78-502.fc39.noarc 6.6 MB/s | 78 kB 00:00 (649/669): perl-base-2.27-502.fc39.noarch.rpm 1.6 MB/s | 16 kB 00:00 (650/669): perl-deprecate-0.04-502.fc39.noarch. 1.4 MB/s | 15 kB 00:00 (651/669): perl-if-0.61.000-502.fc39.noarch.rpm 1.4 MB/s | 14 kB 00:00 (652/669): perl-interpreter-5.38.2-502.fc39.x86 6.7 MB/s | 72 kB 00:00 (653/669): perl-locale-1.10-502.fc39.noarch.rpm 1.1 MB/s | 14 kB 00:00 (654/669): perl-meta-notation-5.38.2-502.fc39.n 866 kB/s | 11 kB 00:00 (655/669): perl-mro-1.28-502.fc39.x86_64.rpm 2.1 MB/s | 29 kB 00:00 (656/669): perl-open-1.13-502.fc39.noarch.rpm 901 kB/s | 17 kB 00:00 (657/669): perl-libs-5.38.2-502.fc39.x86_64.rpm 24 MB/s | 2.4 MB 00:00 (658/669): perl-sigtrap-1.10-502.fc39.noarch.rp 1.7 MB/s | 16 kB 00:00 (659/669): perl-overloading-0.02-502.fc39.noarc 188 kB/s | 13 kB 00:00 (660/669): perl-subs-1.04-502.fc39.noarch.rpm 1.3 MB/s | 12 kB 00:00 (661/669): pyproject-rpm-macros-1.11.0-1.fc39.n 4.5 MB/s | 42 kB 00:00 (662/669): python3-3.12.1-2.fc39.x86_64.rpm 2.9 MB/s | 26 kB 00:00 (663/669): perl-overload-1.37-502.fc39.noarch.r 419 kB/s | 46 kB 00:00 (664/669): python3-devel-3.12.1-2.fc39.x86_64.r 20 MB/s | 312 kB 00:00 (665/669): rav1e-libs-0.6.6-4.fc39.x86_64.rpm 38 MB/s | 1.0 MB 00:00 (666/669): perl-vars-1.05-502.fc39.noarch.rpm 186 kB/s | 13 kB 00:00 (667/669): rsvg-pixbuf-loader-2.57.1-1.fc39.x86 1.8 MB/s | 16 kB 00:00 (668/669): vim-filesystem-9.0.2167-1.fc39.noarc 488 kB/s | 18 kB 00:00 (669/669): python3-libs-3.12.1-2.fc39.x86_64.rp 10 MB/s | 9.2 MB 00:00 -------------------------------------------------------------------------------- Total 25 MB/s | 379 MB 00:15 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: texlive-base-11:20230311-77.fc39.x86_64 1/1 Preparing : 1/1 Running scriptlet: texlive-base-11:20230311-77.fc39.x86_64 1/669 Installing : texlive-base-11:20230311-77.fc39.x86_64 1/669 Installing : texlive-lib-11:20230311-77.fc39.x86_64 2/669 Installing : libpng-2:1.6.37-15.fc39.x86_64 3/669 Installing : libjpeg-turbo-2.1.4-3.fc39.x86_64 4/669 Installing : fonts-filesystem-1:2.0.5-12.fc39.noarch 5/669 Installing : urw-base35-fonts-common-20200910-18.fc39.noarch 6/669 Installing : expat-2.5.0-3.fc39.x86_64 7/669 Installing : tzdata-2023c-2.fc39.noarch 8/669 Installing : python-rpm-macros-3.12-4.fc39.noarch 9/669 Installing : libwebp-1.3.2-2.fc39.x86_64 10/669 Installing : libpaper-1:2.1.1-1.fc39.x86_64 11/669 Installing : jbig2dec-libs-0.19-10.fc39.x86_64 12/669 Installing : dbus-libs-1:1.14.10-1.fc39.x86_64 13/669 Installing : python3-rpm-macros-3.12-4.fc39.noarch 14/669 Installing : libgfortran-13.2.1-6.fc39.x86_64 15/669 Installing : 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python3-iniconfig-1.1.1-14.fc39.noarch 647/669 Installing : python3-markupsafe-2.1.3-2.fc39.x86_64 648/669 Installing : python3-jinja2-3.1.2-5.fc39.noarch 649/669 Installing : python3-pytz-2023.3.post1-1.fc39.noarch 650/669 Installing : python3-snowballstemmer-2.2.0-7.fc39.noarch 651/669 Installing : python3-sphinx-1:7.2.6-3.fc39.noarch 652/669 Installing : libsvm-3.32-2.fc39.x86_64 653/669 Installing : clisp-2.49.93-34.20230718git6692497.fc39.x86_64 654/669 Installing : gumbo-parser-1:0.10.1-29.fc39.x86_64 655/669 Installing : mupdf-1.22.2-3.fc39.x86_64 656/669 Installing : texlive-dvisvgm-11:svn66532-77.fc39.x86_64 657/669 Installing : python3-sphinx-latex-1:7.2.6-3.fc39.noarch 658/669 Installing : texlive-xindy-11:svn65958-77.fc39.x86_64 659/669 Installing : python3-pandas-1.5.3-7.fc39~bootstrap.x86_64 660/669 Installing : python3-pytest-7.4.3-1.fc39.noarch 661/669 Installing : python3-requests-mock-1.10.0-5.fc39.noarch 662/669 Installing : python3-devel-3.12.1-2.fc39.x86_64 663/669 Installing : python3-boto3-1.34.11-2.fc39.noarch 664/669 Installing : python3-configargparse-1.7-1.fc39.noarch 665/669 Installing : latexmk-4.82-1.fc39.noarch 666/669 Installing : librsvg2-tools-2.57.1-1.fc39.x86_64 667/669 Installing : make-1:4.4.1-2.fc39.x86_64 668/669 Installing : help2man-1.49.3-3.fc39.noarch 669/669 Running scriptlet: texlive-base-11:20230311-77.fc39.x86_64 669/669 Running scriptlet: urw-base35-bookman-fonts-20200910-18.fc39.noarch 669/669 Running scriptlet: urw-base35-c059-fonts-20200910-18.fc39.noarch 669/669 Running scriptlet: urw-base35-d050000l-fonts-20200910-18.fc39.noarc 669/669 Running scriptlet: urw-base35-gothic-fonts-20200910-18.fc39.noarch 669/669 Running scriptlet: urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39 669/669 Running scriptlet: urw-base35-nimbus-roman-fonts-20200910-18.fc39.n 669/669 Running scriptlet: urw-base35-nimbus-sans-fonts-20200910-18.fc39.no 669/669 Running scriptlet: urw-base35-p052-fonts-20200910-18.fc39.noarch 669/669 Running scriptlet: urw-base35-standard-symbols-ps-fonts-20200910-18 669/669 Running scriptlet: urw-base35-z003-fonts-20200910-18.fc39.noarch 669/669 Running scriptlet: fontconfig-2.14.2-5.fc39.x86_64 669/669 Running scriptlet: help2man-1.49.3-3.fc39.noarch 669/669 Installed: abattis-cantarell-vf-fonts-0.301-10.fc39.noarch adobe-mappings-cmap-20230622-1.fc39.noarch adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch adobe-mappings-pdf-20190401-5.fc39.noarch at-spi2-core-2.50.0-1.fc39.x86_64 atk-2.50.0-1.fc39.x86_64 avahi-libs-0.8-24.fc39.x86_64 biber-2.19-3.fc39.noarch cairo-1.18.0-1.fc39.x86_64 cairo-gobject-1.18.0-1.fc39.x86_64 clisp-2.49.93-34.20230718git6692497.fc39.x86_64 cups-libs-1:2.4.7-5.fc39.x86_64 dbus-1:1.14.10-1.fc39.x86_64 dbus-broker-35-2.fc39.x86_64 dbus-common-1:1.14.10-1.fc39.noarch dbus-libs-1:1.14.10-1.fc39.x86_64 default-fonts-core-sans-4.0-9.fc39.noarch desktop-file-utils-0.26-9.fc39.x86_64 emacs-filesystem-1:29.1-2.fc39.noarch expat-2.5.0-3.fc39.x86_64 fcgi-2.4.0-47.fc39.x86_64 ffcall-2.4-6.fc39.x86_64 flexiblas-3.3.1-5.fc39.x86_64 flexiblas-netlib-3.3.1-5.fc39.x86_64 flexiblas-openblas-openmp-3.3.1-5.fc39.x86_64 fontconfig-2.14.2-5.fc39.x86_64 fonts-filesystem-1:2.0.5-12.fc39.noarch freetype-2.13.1-2.fc39.x86_64 fribidi-1.0.13-2.fc39.x86_64 gc-8.2.2-4.fc39.x86_64 gd-2.3.3-12.fc39.x86_64 gdk-pixbuf2-2.42.10-5.fc39.x86_64 gdk-pixbuf2-modules-2.42.10-5.fc39.x86_64 ghostscript-10.02.1-2.fc39.x86_64 ghostscript-tools-fonts-10.02.1-2.fc39.x86_64 ghostscript-tools-printing-10.02.1-2.fc39.x86_64 giflib-5.2.1-17.fc39.x86_64 glib2-2.78.3-1.fc39.x86_64 gnutls-3.8.2-2.fc39.x86_64 google-droid-sans-fonts-20200215-17.fc39.noarch google-noto-fonts-common-20230801-4.fc39.noarch google-noto-sans-vf-fonts-20230801-4.fc39.noarch graphite2-1.3.14-12.fc39.x86_64 groff-base-1.23.0-3.fc39.x86_64 gtk-update-icon-cache-3.24.39-1.fc39.x86_64 gtk2-2.24.33-15.fc39.x86_64 guile22-2.2.7-9.fc39.x86_64 gumbo-parser-1:0.10.1-29.fc39.x86_64 harfbuzz-8.2.1-2.fc39.x86_64 help2man-1.49.3-3.fc39.noarch hicolor-icon-theme-0.17-16.fc39.noarch highway-1.0.7-1.fc39.x86_64 hwdata-0.377-2.fc39.noarch jbig2dec-libs-0.19-10.fc39.x86_64 jbigkit-libs-2.1-26.fc39.x86_64 latexmk-4.82-1.fc39.noarch lcms2-2.15-2.fc39.x86_64 leptonica-1.83.1-2.fc39.x86_64 libICE-1.0.10-11.fc39.x86_64 libSM-1.2.3-13.fc39.x86_64 libX11-1.8.7-1.fc39.x86_64 libX11-common-1.8.7-1.fc39.noarch libX11-xcb-1.8.7-1.fc39.x86_64 libXau-1.0.11-3.fc39.x86_64 libXaw-1.0.14-5.fc39.x86_64 libXcomposite-0.4.5-10.fc39.x86_64 libXcursor-1.2.1-4.fc39.x86_64 libXdamage-1.1.5-10.fc39.x86_64 libXext-1.3.5-3.fc39.x86_64 libXfixes-6.0.0-6.fc39.x86_64 libXft-2.3.8-3.fc39.x86_64 libXi-1.8.1-2.fc39.x86_64 libXinerama-1.1.5-3.fc39.x86_64 libXmu-1.1.4-3.fc39.x86_64 libXpm-3.5.17-1.fc39.x86_64 libXrandr-1.5.4-1.fc39.x86_64 libXrender-0.9.11-3.fc39.x86_64 libXt-1.2.1-5.fc39.x86_64 libXtst-1.2.4-3.fc39.x86_64 libXxf86vm-1.1.5-3.fc39.x86_64 libaom-3.8.0-1.fc39.x86_64 libavif-0.11.1-11.fc39.x86_64 libb2-0.98.1-9.fc39.x86_64 libdatrie-0.2.13-7.fc39.x86_64 libdav1d-1.2.1-2.fc39.x86_64 libdrm-2.4.117-1.fc39.x86_64 libgfortran-13.2.1-6.fc39.x86_64 libglade2-2.6.4-30.fc39.x86_64 libglvnd-1:1.7.0-1.fc39.x86_64 libglvnd-glx-1:1.7.0-1.fc39.x86_64 libgs-10.02.1-2.fc39.x86_64 libicu-73.2-2.fc39.x86_64 libijs-0.35-19.fc39.x86_64 libimagequant-4.0.3-2.fc39.x86_64 libjpeg-turbo-2.1.4-3.fc39.x86_64 libjxl-1:0.8.2-3.fc39.x86_64 liblerc-4.0.0-4.fc39.x86_64 libpaper-1:2.1.1-1.fc39.x86_64 libpciaccess-0.16-9.fc39.x86_64 libpng-2:1.6.37-15.fc39.x86_64 libpq-15.3-1.fc39.x86_64 libquadmath-13.2.1-6.fc39.x86_64 librsvg2-2.57.1-1.fc39.x86_64 librsvg2-tools-2.57.1-1.fc39.x86_64 libsvm-3.32-2.fc39.x86_64 libthai-0.1.29-6.fc39.x86_64 libtiff-4.4.0-8.fc39.x86_64 libtool-ltdl-2.4.7-7.fc39.x86_64 libvmaf-2.3.0-6.fc39.x86_64 libwebp-1.3.2-2.fc39.x86_64 libxcb-1.13.1-12.fc39.x86_64 libxshmfence-1.3-13.fc39.x86_64 libxslt-1.1.39-1.fc39.x86_64 mailcap-2.1.54-2.fc39.noarch make-1:4.4.1-2.fc39.x86_64 mesa-libGL-23.3.1-4.fc39.x86_64 mesa-libglapi-23.3.1-4.fc39.x86_64 mpdecimal-2.5.1-7.fc39.x86_64 mupdf-1.22.2-3.fc39.x86_64 ncurses-6.4-7.20230520.fc39.x86_64 nettle-3.9.1-2.fc39.x86_64 openblas-0.3.21-6.fc39.x86_64 openblas-openmp-0.3.21-6.fc39.x86_64 openjpeg2-2.5.0-5.fc39.x86_64 pango-1.51.0-1.fc39.x86_64 pari-2.15.4-2.fc39.x86_64 perl-Authen-SASL-2.1700-1.fc39.noarch perl-AutoLoader-5.74-502.fc39.noarch perl-B-1.88-502.fc39.x86_64 perl-B-Hooks-EndOfScope-0.26-7.fc39.noarch perl-Business-ISBN-3.008-2.fc39.noarch perl-Business-ISBN-Data-20230926.001-1.fc39.noarch perl-Business-ISMN-1.203-2.fc39.noarch perl-Business-ISSN-1.005-8.fc39.noarch perl-Carp-1.54-500.fc39.noarch perl-Class-Accessor-0.51-18.fc39.noarch perl-Class-Data-Inheritable-0.09-6.fc39.noarch perl-Class-Inspector-1.36-14.fc39.noarch perl-Class-Method-Modifiers-2.15-2.fc39.noarch perl-Class-Singleton-1.6-9.fc39.noarch perl-Class-Struct-0.68-502.fc39.noarch perl-Clone-0.46-4.fc39.x86_64 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perl-Digest-HMAC-1.04-8.fc39.noarch perl-Digest-MD5-2.58-500.fc39.x86_64 perl-Digest-SHA-1:6.04-501.fc39.x86_64 perl-Dist-CheckConflicts-0.11-28.fc39.noarch perl-DynaLoader-1.54-502.fc39.x86_64 perl-DynaLoader-Functions-0.004-2.fc39.noarch perl-Email-Date-Format-1.008-2.fc39.noarch perl-Encode-4:3.19-500.fc39.x86_64 perl-Encode-Locale-1.05-27.fc39.noarch perl-English-1.11-502.fc39.noarch perl-Env-1.06-500.fc39.noarch perl-Errno-1.37-502.fc39.x86_64 perl-Eval-Closure-0.14-21.fc39.noarch perl-Exception-Class-1.45-8.fc39.noarch perl-Exporter-5.77-500.fc39.noarch perl-ExtUtils-MM-Utils-2:7.70-501.fc39.noarch perl-Fcntl-1.15-502.fc39.x86_64 perl-File-Basename-2.86-502.fc39.noarch perl-File-Compare-1.100.700-502.fc39.noarch perl-File-Copy-2.41-502.fc39.noarch perl-File-Find-1.43-502.fc39.noarch perl-File-Find-Rule-0.34-26.fc39.noarch perl-File-Listing-6.16-1.fc39.noarch perl-File-Path-2.18-500.fc39.noarch perl-File-ShareDir-1.118-9.fc39.noarch perl-File-Slurper-0.014-3.fc39.noarch perl-File-Temp-1:0.231.100-500.fc39.noarch perl-File-stat-1.13-502.fc39.noarch perl-FileHandle-2.05-502.fc39.noarch perl-Filter-2:1.64-501.fc39.x86_64 perl-GSSAPI-0.28-43.fc39.x86_64 perl-Getopt-Long-1:2.54-500.fc39.noarch perl-Getopt-Std-1.13-502.fc39.noarch perl-HTML-Parser-3.81-3.fc39.x86_64 perl-HTML-Tagset-3.20-54.fc39.noarch perl-HTTP-Cookies-6.10-10.fc39.noarch perl-HTTP-Date-6.06-2.fc39.noarch perl-HTTP-Message-6.44-3.fc39.noarch perl-HTTP-Negotiate-6.01-36.fc39.noarch perl-HTTP-Tiny-0.088-3.fc39.noarch perl-Hash-Util-FieldHash-1.26-502.fc39.x86_64 perl-I18N-LangTags-0.45-502.fc39.noarch perl-I18N-Langinfo-0.22-502.fc39.x86_64 perl-IO-1.52-502.fc39.x86_64 perl-IO-Compress-2.206-1.fc39.noarch perl-IO-HTML-1.004-11.fc39.noarch perl-IO-Socket-IP-0.42-1.fc39.noarch perl-IO-Socket-SSL-2.083-3.fc39.noarch perl-IO-String-1.08-48.fc39.noarch perl-IPC-Cmd-2:1.04-501.fc39.noarch perl-IPC-Open3-1.22-502.fc39.noarch perl-IPC-Run3-0.048-29.fc39.noarch perl-IPC-SysV-2.09-501.fc39.x86_64 perl-IPC-System-Simple-1.30-11.fc39.noarch perl-JSON-4.10-3.fc39.noarch perl-LDAP-1:0.68-11.fc39.noarch perl-LWP-MediaTypes-6.04-15.fc39.noarch perl-LWP-Protocol-https-6.11-1.fc39.noarch perl-Lingua-Translit-0.29-4.fc39.noarch perl-List-AllUtils-0.19-10.fc39.noarch perl-List-SomeUtils-0.59-3.fc39.noarch perl-List-UtilsBy-0.12-7.fc39.noarch perl-Locale-Maketext-1.33-501.fc39.noarch perl-Locale-Maketext-Simple-1:0.21-502.fc39.noarch perl-Log-Dispatch-2.71-2.fc39.noarch perl-Log-Dispatch-FileRotate-1.38-7.fc39.noarch perl-Log-Log4perl-1.57-3.fc39.noarch perl-MIME-Base64-3.16-500.fc39.x86_64 perl-MIME-Charset-1.013.1-3.fc39.noarch perl-MIME-Lite-3.033-8.fc39.noarch perl-MIME-Types-2.24-3.fc39.noarch perl-MRO-Compat-0.15-7.fc39.noarch perl-Mail-Sender-1:0.903-22.fc39.noarch perl-Mail-Sendmail-0.80-18.fc39.noarch perl-MailTools-2.21-14.fc39.noarch perl-Math-BigInt-1:1.9998.39-2.fc39.noarch perl-Math-BigRat-0.2624-500.fc39.noarch perl-Math-Complex-1.62-502.fc39.noarch 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texlive-xifthen-11:svn38929-69.fc39.noarch texlive-xindy-11:svn65958-77.fc39.x86_64 texlive-xkeyval-11:svn63616-69.fc39.noarch texlive-xpatch-11:svn54563-69.fc39.noarch texlive-xstring-11:svn65551-69.fc39.noarch texlive-xunicode-11:svn30466.0.981-69.fc39.noarch texlive-zapfchan-11:svn61719-69.fc39.noarch texlive-zapfding-11:svn61719-69.fc39.noarch texlive-zref-11:svn62977-69.fc39.noarch tzdata-2023c-2.fc39.noarch urw-base35-bookman-fonts-20200910-18.fc39.noarch urw-base35-c059-fonts-20200910-18.fc39.noarch urw-base35-d050000l-fonts-20200910-18.fc39.noarch urw-base35-fonts-20200910-18.fc39.noarch urw-base35-fonts-common-20200910-18.fc39.noarch urw-base35-gothic-fonts-20200910-18.fc39.noarch urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch urw-base35-p052-fonts-20200910-18.fc39.noarch urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch urw-base35-z003-fonts-20200910-18.fc39.noarch vim-filesystem-2:9.0.2167-1.fc39.noarch xdg-utils-1.1.3-15.fc39.noarch xml-common-0.6.3-61.fc39.noarch xpdf-libs-1:4.04-10.fc39.x86_64 xprop-1.2.5-4.fc39.x86_64 zziplib-0.13.72-5.fc39.x86_64 Complete! Finish: build setup for snakemake-7.32.4-3.fc39.src.rpm Start: rpmbuild snakemake-7.32.4-3.fc39.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1704412800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.ciu9H0 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf snakemake-7.32.4 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-7.32.4.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd snakemake-7.32.4 + rm -rf /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/snakemake-7.11.0-docs-no-animated-demo.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP . recursedown('.') recursedown('./.github') 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recursedown('./tests/test_paramspace/expected-results/results/empty/plots') recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace/expected-results/results/filenamesep') recursedown('./tests/test_paramspace/expected-results/results/filenamesep/plots') recursedown('./tests/test_paramspace/expected-results/results/filenamesep/simulations') recursedown('./tests/test_paramspace/expected-results/results/full') recursedown('./tests/test_paramspace/expected-results/results/full/plots') recursedown('./tests/test_paramspace/expected-results/results/full/simulations') recursedown('./tests/test_paramspace/expected-results/results/full_reorder') recursedown('./tests/test_paramspace/expected-results/results/full_reorder/plots') recursedown('./tests/test_paramspace/expected-results/results/full_reorder/simulations') recursedown('./tests/test_paramspace/expected-results/results/one') recursedown('./tests/test_paramspace/expected-results/results/one/plots') recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace/expected-results/results/one/simulations') recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace/expected-results/results/sep') recursedown('./tests/test_paramspace/expected-results/results/sep/plots') recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_1') recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_2') recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_1') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_2') recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern') recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern/plots') recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern/simulations') recursedown('./tests/test_paramspace/expected-results/results/two') recursedown('./tests/test_paramspace/expected-results/results/two/plots') recursedown('./tests/test_paramspace/expected-results/results/two/plots/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/two/plots/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/two/simulations') recursedown('./tests/test_paramspace/expected-results/results/two/simulations/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/two/simulations/alpha~2') recursedown('./tests/test_paramspace/scripts') recursedown('./tests/test_paramspace_single_wildcard') recursedown('./tests/test_paramspace_single_wildcard/expected-results') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/scripts') recursedown('./tests/test_parser') recursedown('./tests/test_parser/expected-results') recursedown('./tests/test_parsing_terminal_comment_following_statement') recursedown('./tests/test_parsing_terminal_comment_following_statement/expected-results') recursedown('./tests/test_pathlib') recursedown('./tests/test_pathlib/expected-results') recursedown('./tests/test_pathlib/expected-results/outdir') recursedown('./tests/test_pathlib/expected-results/outdir/function_unpacking') recursedown('./tests/test_pathlib_missing_file') recursedown('./tests/test_pathlib_missing_file/expected-results') recursedown('./tests/test_peppy') recursedown('./tests/test_peppy/expected-results') recursedown('./tests/test_peppy/pep') recursedown('./tests/test_peppy/workflow') recursedown('./tests/test_peppy/workflow/schemas') recursedown('./tests/test_persistent_dict') recursedown('./tests/test_persistent_dict/expected-results') recursedown('./tests/test_pipe_depend') recursedown('./tests/test_pipe_depend/expected-results') recursedown('./tests/test_pipes') recursedown('./tests/test_pipes/expected-results') recursedown('./tests/test_pipes2') recursedown('./tests/test_pipes2/expected-results') recursedown('./tests/test_pipes_fail') recursedown('./tests/test_pipes_fail/expected-results') recursedown('./tests/test_pipes_multiple') recursedown('./tests/test_pipes_multiple/expected-results') recursedown('./tests/test_prebuilt_conda_script') recursedown('./tests/test_prebuilt_conda_script/dummy_package') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src/dummy') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src/dummy.egg-info') recursedown('./tests/test_prebuilt_conda_script/expected-results') recursedown('./tests/test_profile') recursedown('./tests/test_profile/expected-results') recursedown('./tests/test_protected_symlink_output') recursedown('./tests/test_protected_symlink_output/expected-results') recursedown('./tests/test_r_wrapper') recursedown('./tests/test_remote') recursedown('./tests/test_remote/expected-results') recursedown('./tests/test_remote_auto') recursedown('./tests/test_remote_auto/expected-results') recursedown('./tests/test_remote_azure') recursedown('./tests/test_remote_gs') recursedown('./tests/test_remote_gs/expected-results') recursedown('./tests/test_remote_http') recursedown('./tests/test_remote_http/expected-results') recursedown('./tests/test_remote_irods') recursedown('./tests/test_remote_irods/expected-results') recursedown('./tests/test_remote_irods/setup-data') recursedown('./tests/test_remote_irods/test-data') recursedown('./tests/test_remote_log') recursedown('./tests/test_remote_log/expected-results') recursedown('./tests/test_remote_ncbi') recursedown('./tests/test_remote_ncbi/expected-results') recursedown('./tests/test_remote_ncbi_simple') recursedown('./tests/test_remote_ncbi_simple/expected-results') recursedown('./tests/test_remote_sftp') recursedown('./tests/test_remote_sftp/expected-results') recursedown('./tests/test_remote_zenodo') recursedown('./tests/test_remote_zenodo/expected-results') recursedown('./tests/test_report') recursedown('./tests/test_report/.snakemake') recursedown('./tests/test_report/.snakemake/metadata') recursedown('./tests/test_report/data') recursedown('./tests/test_report/envs') recursedown('./tests/test_report/expected-results') recursedown('./tests/test_report/report') recursedown('./tests/test_report/testdir') recursedown('./tests/test_report_dir') recursedown('./tests/test_report_dir/expected-results') recursedown('./tests/test_report_dir/test') recursedown('./tests/test_report_dir/test/js') recursedown('./tests/test_report_display_code') recursedown('./tests/test_report_display_code/expected-results') recursedown('./tests/test_report_zip') recursedown('./tests/test_report_zip/.snakemake') recursedown('./tests/test_report_zip/.snakemake/metadata') recursedown('./tests/test_report_zip/data') recursedown('./tests/test_report_zip/envs') recursedown('./tests/test_report_zip/expected-results') recursedown('./tests/test_report_zip/report') recursedown('./tests/test_report_zip/testdir') recursedown('./tests/test_restartable_job_cmd_exit_1') recursedown('./tests/test_restartable_job_cmd_exit_1/expected-results') recursedown('./tests/test_restartable_job_qsub_exit_1') recursedown('./tests/test_restartable_job_qsub_exit_1/expected-results') recursedown('./tests/test_retries') recursedown('./tests/test_retries/expected-results') recursedown('./tests/test_retries_not_overriden') recursedown('./tests/test_retries_not_overriden/expected-results') recursedown('./tests/test_rule_defined_in_for_loop') recursedown('./tests/test_rule_defined_in_for_loop/expected-results') recursedown('./tests/test_rule_inheritance_globals') recursedown('./tests/test_rule_inheritance_globals/.snakemake') recursedown('./tests/test_rule_inheritance_globals/.snakemake/metadata') recursedown('./tests/test_rule_inheritance_globals/expected-results') recursedown('./tests/test_ruledag') recursedown('./tests/test_ruledeps') recursedown('./tests/test_ruledeps/expected-results') recursedown('./tests/test_run_namedlist') recursedown('./tests/test_run_namedlist/expected-results') recursedown('./tests/test_same_wildcard') recursedown('./tests/test_same_wildcard/expected-results') recursedown('./tests/test_scatter_gather') recursedown('./tests/test_scatter_gather/expected-results') recursedown('./tests/test_scatter_gather/expected-results/gathered') recursedown('./tests/test_scatter_gather/expected-results/splitted') recursedown('./tests/test_scatter_gather_multiple_processes') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/gathered') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_a') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_b') recursedown('./tests/test_script') recursedown('./tests/test_script/envs') recursedown('./tests/test_script/expected-results') recursedown('./tests/test_script/scripts') recursedown('./tests/test_script_py') recursedown('./tests/test_script_py/expected-results') recursedown('./tests/test_script_py/scripts') recursedown('./tests/test_service_jobs') recursedown('./tests/test_service_jobs/expected-results') recursedown('./tests/test_set_resources') recursedown('./tests/test_set_resources/expected-results') recursedown('./tests/test_shadow') recursedown('./tests/test_shadow/expected-results') recursedown('./tests/test_shadow_copy') recursedown('./tests/test_shadow_copy/expected-results') recursedown('./tests/test_shadow_prefix') recursedown('./tests/test_shadow_prefix/expected-results') recursedown('./tests/test_shadowed_log') recursedown('./tests/test_shadowed_log/expected-results') recursedown('./tests/test_shell') recursedown('./tests/test_shell/expected-results') recursedown('./tests/test_singularity') recursedown('./tests/test_singularity/expected-results') recursedown('./tests/test_singularity_conda') recursedown('./tests/test_singularity_conda/expected-results') recursedown('./tests/test_singularity_global') recursedown('./tests/test_singularity_global/expected-results') recursedown('./tests/test_singularity_module') recursedown('./tests/test_singularity_module/expected-results') recursedown('./tests/test_singularity_none') recursedown('./tests/test_singularity_none/expected-results') recursedown('./tests/test_slurm_mpi') recursedown('./tests/test_slurm_mpi/envs') recursedown('./tests/test_slurm_mpi/expected-results') recursedown('./tests/test_solver') recursedown('./tests/test_solver/expected-results') recursedown('./tests/test_source_path') recursedown('./tests/test_source_path/expected-results') recursedown('./tests/test_source_path/workflow') recursedown('./tests/test_source_path/workflow/resources') recursedown('./tests/test_spaces_in_fnames') recursedown('./tests/test_spaces_in_fnames/expected-results') recursedown('./tests/test_speed') recursedown('./tests/test_srcdir') recursedown('./tests/test_srcdir/expected-results') recursedown('./tests/test_static_remote') recursedown('./tests/test_static_remote/expected-results') recursedown('./tests/test_strict_mode') recursedown('./tests/test_strict_mode/expected-results') recursedown('./tests/test_string_resources') recursedown('./tests/test_string_resources/expected-results') recursedown('./tests/test_subworkflow_config') recursedown('./tests/test_subworkflow_config/expected-results') recursedown('./tests/test_subworkflows') recursedown('./tests/test_subworkflows/expected-results') recursedown('./tests/test_symlink_temp') recursedown('./tests/test_symlink_temp/expected-results') recursedown('./tests/test_symlink_time_handling') recursedown('./tests/test_symlink_time_handling/expected-results') recursedown('./tests/test_temp') recursedown('./tests/test_temp/expected-results') recursedown('./tests/test_temp_expand') recursedown('./tests/test_temp_expand/expected-results') recursedown('./tests/test_template_engine') recursedown('./tests/test_template_engine/expected-results') recursedown('./tests/test_tes') recursedown('./tests/test_tes/expected-results') recursedown('./tests/test_threads') recursedown('./tests/test_threads/expected-results') recursedown('./tests/test_threads0') recursedown('./tests/test_threads0/expected-results') recursedown('./tests/test_tibanna') recursedown('./tests/test_tibanna/expected-results') recursedown('./tests/test_tibanna/scripts') recursedown('./tests/test_tmpdir') recursedown('./tests/test_tmpdir/expected-results') recursedown('./tests/test_touch') recursedown('./tests/test_touch/expected-results') recursedown('./tests/test_touch_pipeline_with_temp_dir') recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results') recursedown('./tests/test_touch_remote_prefix') recursedown('./tests/test_touch_remote_prefix/expected-results') recursedown('./tests/test_touch_with_directories') recursedown('./tests/test_touch_with_directories/expected-results') recursedown('./tests/test_unpack_dict') recursedown('./tests/test_unpack_dict/expected-results') recursedown('./tests/test_unpack_list') recursedown('./tests/test_unpack_list/expected-results') recursedown('./tests/test_until') recursedown('./tests/test_until/expected-results') recursedown('./tests/test_update_config') recursedown('./tests/test_update_config/expected-results') recursedown('./tests/test_url_include') recursedown('./tests/test_url_include/expected-results') recursedown('./tests/test_use_rule_same_module') recursedown('./tests/test_use_rule_same_module/expected-results') recursedown('./tests/test_validate') recursedown('./tests/test_validate/expected-results') recursedown('./tests/test_wildcard_count_ambiguity') recursedown('./tests/test_wildcard_count_ambiguity/expected-results') recursedown('./tests/test_wildcard_keyword') recursedown('./tests/test_wildcard_keyword/expected-results') recursedown('./tests/test_workflow_profile') recursedown('./tests/test_workflow_profile/dummy-general-profile') recursedown('./tests/test_workflow_profile/expected-results') recursedown('./tests/test_workflow_profile/workflow') recursedown('./tests/test_workflow_profile/workflow/profiles') recursedown('./tests/test_workflow_profile/workflow/profiles/default') recursedown('./tests/test_wrapper') recursedown('./tests/test_wrapper/expected-results') recursedown('./tests/test_xrootd') recursedown('./tests/test_yaml_config') recursedown('./tests/test_yaml_config/expected-results') + sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py + sed -r -i 's@"python"@"/usr/bin/python3"@g' tests/test_linting.py + sed -r -i /sphinxcontrib-napoleon/d docs/requirements.txt + echo 'latex_engine = '\''xelatex'\''' + for editor in nano vim + cp -vp misc/nano/README.md README-nano.md + for editor in nano vim + cp -vp misc/vim/README.md README-vim.md + RPM_EC=0 ++ jobs -p + exit 0 'misc/nano/README.md' -> 'README-nano.md' 'misc/vim/README.md' -> 'README-vim.md' Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.GmilZC + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement not satisfied: sphinx-argparse Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement not satisfied: sphinx_rtd_theme Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement not satisfied: myst-parser Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement not satisfied: appdirs Exiting dependency generation pass: all requirements files + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc39.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 27 kB/s | 1.5 kB 00:00 fedora 810 kB/s | 25 kB 00:00 updates 691 kB/s | 22 kB 00:00 Package librsvg2-tools-2.57.1-1.fc39.x86_64 is already installed. Package texlive-xindy-11:svn65958-77.fc39.x86_64 is already installed. Package help2man-1.49.3-3.fc39.noarch is already installed. Package latexmk-4.82-1.fc39.noarch is already installed. Package make-1:4.4.1-2.fc39.x86_64 is already installed. Package pyproject-rpm-macros-1.11.0-1.fc39.noarch is already installed. Package python3-devel-3.12.1-2.fc39.x86_64 is already installed. Package python3-devel-3.12.1-2.fc39.x86_64 is already installed. Package python3-sphinx-latex-1:7.2.6-3.fc39.noarch is already installed. Package python3-boto3-1.34.11-2.fc39.noarch is already installed. Package python3-configargparse-1.7-1.fc39.noarch is already installed. Package python3-configargparse-1.7-1.fc39.noarch is already installed. Package python3-docutils-0.20.1-1.fc39.noarch is already installed. Package python3-packaging-23.2-2.fc39.noarch is already installed. Package python3-pandas-1.5.3-7.fc39~bootstrap.x86_64 is already installed. Package python3-pytest-7.4.3-1.fc39.noarch is already installed. Package python3-requests-mock-1.10.0-5.fc39.noarch is already installed. Package python3-sphinx-1:7.2.6-3.fc39.noarch is already installed. Package texlive-xetex-11:svn66203-77.fc39.x86_64 is already installed. Package vim-filesystem-2:9.0.2167-1.fc39.noarch is already installed. Dependencies resolved. ======================================================================================= Package Arch Version Repo Size ======================================================================================= Installing: python3-appdirs noarch 1.4.4-11.fc39 copr_base 23 k python3-myst-parser noarch 2.0.0-2.fc39 fedora 201 k python3-pip noarch 23.3.1-2.fc39 copr_base 2.9 M python3-sphinx-argparse noarch 0.4.0-4.fc39 fedora 39 k python3-sphinx_rtd_theme noarch 2.0.0-1.fc39 copr_base 74 k Installing dependencies: fontawesome4-fonts noarch 1:4.7.0-19.fc39 fedora 204 k google-roboto-slab-fonts noarch 1.100263-0.21.20150923git.fc39 fedora 239 k lato-fonts noarch 2.015-17.fc39 fedora 3.1 M libyaml x86_64 0.2.5-12.fc39 fedora 59 k python3-markdown-it-py noarch 3.0.0-2.fc39 fedora 199 k python3-mdit-py-plugins noarch 0.4.0-2.fc39 fedora 120 k python3-mdurl noarch 0.1.2-4.fc39 fedora 31 k python3-pyyaml x86_64 6.0.1-11.fc39 copr_base 219 k python3-sphinxcontrib-jquery noarch 4.1-3.fc39 fedora 113 k Transaction Summary ======================================================================================= Install 14 Packages Total download size: 7.5 M Installed size: 30 M Downloading Packages: (1/14): python3-appdirs-1.4.4-11.fc39.noarch.rp 558 kB/s | 23 kB 00:00 (2/14): python3-sphinx_rtd_theme-2.0.0-1.fc39.n 1.8 MB/s | 74 kB 00:00 (3/14): python3-pyyaml-6.0.1-11.fc39.x86_64.rpm 2.3 MB/s | 219 kB 00:00 (4/14): python3-pip-23.3.1-2.fc39.noarch.rpm 25 MB/s | 2.9 MB 00:00 (5/14): google-roboto-slab-fonts-1.100263-0.21. 1.1 MB/s | 239 kB 00:00 (6/14): fontawesome4-fonts-4.7.0-19.fc39.noarch 870 kB/s | 204 kB 00:00 (7/14): libyaml-0.2.5-12.fc39.x86_64.rpm 3.6 MB/s | 59 kB 00:00 (8/14): python3-mdit-py-plugins-0.4.0-2.fc39.no 2.8 MB/s | 120 kB 00:00 (9/14): python3-mdurl-0.1.2-4.fc39.noarch.rpm 1.9 MB/s | 31 kB 00:00 (10/14): python3-markdown-it-py-3.0.0-2.fc39.no 2.9 MB/s | 199 kB 00:00 (11/14): python3-sphinx-argparse-0.4.0-4.fc39.n 1.6 MB/s | 39 kB 00:00 (12/14): python3-myst-parser-2.0.0-2.fc39.noarc 2.9 MB/s | 201 kB 00:00 (13/14): python3-sphinxcontrib-jquery-4.1-3.fc3 1.9 MB/s | 113 kB 00:00 (14/14): lato-fonts-2.015-17.fc39.noarch.rpm 3.4 MB/s | 3.1 MB 00:00 -------------------------------------------------------------------------------- Total 7.1 MB/s | 7.5 MB 00:01 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-sphinxcontrib-jquery-4.1-3.fc39.noarch 1/14 Installing : python3-mdurl-0.1.2-4.fc39.noarch 2/14 Installing : python3-markdown-it-py-3.0.0-2.fc39.noarch 3/14 Installing : python3-mdit-py-plugins-0.4.0-2.fc39.noarch 4/14 Installing : libyaml-0.2.5-12.fc39.x86_64 5/14 Installing : python3-pyyaml-6.0.1-11.fc39.x86_64 6/14 Installing : lato-fonts-2.015-17.fc39.noarch 7/14 Installing : google-roboto-slab-fonts-1.100263-0.21.20150923git 8/14 Installing : fontawesome4-fonts-1:4.7.0-19.fc39.noarch 9/14 Installing : python3-sphinx_rtd_theme-2.0.0-1.fc39.noarch 10/14 Installing : python3-myst-parser-2.0.0-2.fc39.noarch 11/14 Installing : python3-sphinx-argparse-0.4.0-4.fc39.noarch 12/14 Installing : python3-pip-23.3.1-2.fc39.noarch 13/14 Installing : python3-appdirs-1.4.4-11.fc39.noarch 14/14 Running scriptlet: python3-appdirs-1.4.4-11.fc39.noarch 14/14 Installed: fontawesome4-fonts-1:4.7.0-19.fc39.noarch google-roboto-slab-fonts-1.100263-0.21.20150923git.fc39.noarch lato-fonts-2.015-17.fc39.noarch libyaml-0.2.5-12.fc39.x86_64 python3-appdirs-1.4.4-11.fc39.noarch python3-markdown-it-py-3.0.0-2.fc39.noarch python3-mdit-py-plugins-0.4.0-2.fc39.noarch python3-mdurl-0.1.2-4.fc39.noarch python3-myst-parser-2.0.0-2.fc39.noarch python3-pip-23.3.1-2.fc39.noarch python3-pyyaml-6.0.1-11.fc39.x86_64 python3-sphinx-argparse-0.4.0-4.fc39.noarch python3-sphinx_rtd_theme-2.0.0-1.fc39.noarch python3-sphinxcontrib-jquery-4.1-3.fc39.noarch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.HPGgAk + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement not satisfied: wheel Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc39.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 46 kB/s | 1.5 kB 00:00 fedora 820 kB/s | 25 kB 00:00 updates 694 kB/s | 22 kB 00:00 Package librsvg2-tools-2.57.1-1.fc39.x86_64 is already installed. Package texlive-xindy-11:svn65958-77.fc39.x86_64 is already installed. Package help2man-1.49.3-3.fc39.noarch is already installed. Package latexmk-4.82-1.fc39.noarch is already installed. Package make-1:4.4.1-2.fc39.x86_64 is already installed. Package pyproject-rpm-macros-1.11.0-1.fc39.noarch is already installed. Package python3-devel-3.12.1-2.fc39.x86_64 is already installed. Package python3-devel-3.12.1-2.fc39.x86_64 is already installed. Package python3-sphinx-latex-1:7.2.6-3.fc39.noarch is already installed. Package python3-appdirs-1.4.4-11.fc39.noarch is already installed. Package python3-boto3-1.34.11-2.fc39.noarch is already installed. Package python3-configargparse-1.7-1.fc39.noarch is already installed. Package python3-configargparse-1.7-1.fc39.noarch is already installed. Package python3-docutils-0.20.1-1.fc39.noarch is already installed. Package python3-myst-parser-2.0.0-2.fc39.noarch is already installed. Package python3-packaging-23.2-2.fc39.noarch is already installed. Package python3-pandas-1.5.3-7.fc39~bootstrap.x86_64 is already installed. Package python3-pip-23.3.1-2.fc39.noarch is already installed. Package python3-pytest-7.4.3-1.fc39.noarch is already installed. Package python3-requests-mock-1.10.0-5.fc39.noarch is already installed. Package python3-setuptools-68.2.2-1.fc39.noarch is already installed. Package python3-sphinx-1:7.2.6-3.fc39.noarch is already installed. Package python3-sphinx-argparse-0.4.0-4.fc39.noarch is already installed. Package python3-sphinx_rtd_theme-2.0.0-1.fc39.noarch is already installed. Package texlive-xetex-11:svn66203-77.fc39.x86_64 is already installed. Package vim-filesystem-2:9.0.2167-1.fc39.noarch is already installed. Dependencies resolved. ================================================================================ Package Architecture Version Repository Size ================================================================================ Installing: python3-wheel noarch 1:0.41.2-1.fc39 copr_base 148 k Transaction Summary ================================================================================ Install 1 Package Total download size: 148 k Installed size: 507 k Downloading Packages: python3-wheel-0.41.2-1.fc39.noarch.rpm 1.5 MB/s | 148 kB 00:00 -------------------------------------------------------------------------------- Total 1.5 MB/s | 148 kB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-wheel-1:0.41.2-1.fc39.noarch 1/1 Running scriptlet: python3-wheel-1:0.41.2-1.fc39.noarch 1/1 Installed: python3-wheel-1:0.41.2-1.fc39.noarch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.77SNY2 + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: connection-pool >=0.0.3 Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: datrie Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: gitpython Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: humanfriendly Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: jsonschema Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: nbformat Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: psutil Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pulp >=2.0 Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: reretry Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: smart-open >=3.0 Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: stopit Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: tabulate Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: throttler Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: toposort >=1.10 Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: wrapt Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: yte <2.0,>=1.5.1 Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-storage-blob ; extra == 'azure' Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-batch ; extra == 'azure' Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-core ; extra == 'azure' Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-identity ; extra == 'azure' Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-mgmt-batch ; extra == 'azure' Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-api-python-client ; extra == 'google-cloud' Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-cloud-storage ; extra == 'google-cloud' Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-crc32c ; extra == 'google-cloud' Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: oauth2client ; extra == 'google-cloud' Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: slacker ; extra == 'messaging' Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc39.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 25 kB/s | 1.5 kB 00:00 fedora 798 kB/s | 25 kB 00:00 updates 707 kB/s | 22 kB 00:00 Package python3-jinja2-3.1.2-5.fc39.noarch is already installed. Package librsvg2-tools-2.57.1-1.fc39.x86_64 is already installed. Package texlive-xindy-11:svn65958-77.fc39.x86_64 is already installed. Package help2man-1.49.3-3.fc39.noarch is already installed. Package latexmk-4.82-1.fc39.noarch is already installed. Package make-1:4.4.1-2.fc39.x86_64 is already installed. Package pyproject-rpm-macros-1.11.0-1.fc39.noarch is already installed. Package python3-devel-3.12.1-2.fc39.x86_64 is already installed. Package python3-devel-3.12.1-2.fc39.x86_64 is already installed. Package python3-sphinx-latex-1:7.2.6-3.fc39.noarch is already installed. Package python3-appdirs-1.4.4-11.fc39.noarch is already installed. Package python3-boto3-1.34.11-2.fc39.noarch is already installed. Package python3-configargparse-1.7-1.fc39.noarch is already installed. Package python3-configargparse-1.7-1.fc39.noarch is already installed. Package python3-docutils-0.20.1-1.fc39.noarch is already installed. Package python3-myst-parser-2.0.0-2.fc39.noarch is already installed. Package python3-packaging-23.2-2.fc39.noarch is already installed. Package python3-pandas-1.5.3-7.fc39~bootstrap.x86_64 is already installed. Package python3-pip-23.3.1-2.fc39.noarch is already installed. Package python3-pygments-2.17.2-1.fc39.noarch is already installed. Package python3-pytest-7.4.3-1.fc39.noarch is already installed. Package python3-pyyaml-6.0.1-11.fc39.x86_64 is already installed. Package python3-requests-2.28.2-7.fc39.noarch is already installed. Package python3-requests-mock-1.10.0-5.fc39.noarch is already installed. Package python3-setuptools-68.2.2-1.fc39.noarch is already installed. Package python3-sphinx-1:7.2.6-3.fc39.noarch is already installed. Package python3-sphinx-argparse-0.4.0-4.fc39.noarch is already installed. Package python3-sphinx_rtd_theme-2.0.0-1.fc39.noarch is already installed. Package python3-wheel-1:0.41.2-1.fc39.noarch is already installed. Package texlive-xetex-11:svn66203-77.fc39.x86_64 is already installed. Package vim-filesystem-2:9.0.2167-1.fc39.noarch is already installed. Dependencies resolved. ============================================================================================= Package Arch Version Repo Size ============================================================================================= Installing: python3-GitPython noarch 3.1.40-1.fc39 copr_base 362 k python3-azure-batch noarch 14.0.0-1.fc39 copr_base 207 k python3-azure-core noarch 2:1.28.0-3.fc39 fedora 295 k python3-azure-identity noarch 1:1.14.0-1.fc39 copr_base 200 k python3-azure-mgmt-batch noarch 17.0.0-5.fc39 fedora 214 k python3-azure-storage-blob noarch 12.14.1-4.fc39 fedora 546 k python3-connection_pool noarch 0.0.3-9.fc39 copr_base 17 k python3-datrie x86_64 0.8.2-22.fc39 copr_base 158 k python3-google-api-client noarch 2:2.112.0-1.fc39 copr_base 4.7 M python3-google-cloud-storage noarch 2.14.0-2.fc39 copr_base 190 k python3-google-crc32c x86_64 1.1.2-9.fc39 fedora 36 k python3-humanfriendly noarch 10.0-8.fc39 copr_base 132 k python3-jsonschema noarch 4.19.1-1.fc39 updates 202 k python3-nbformat noarch 5.9.1-2.fc39 fedora 143 k python3-oauth2client noarch 4.1.3-23.fc39 fedora 184 k python3-psutil x86_64 5.9.5-2.fc39 copr_base 260 k python3-pulp noarch 2.7.0-3.fc39 fedora 209 k python3-reretry noarch 0.11.8-5.fc39 fedora 18 k python3-slacker noarch 0.14.0-12.fc39 fedora 35 k python3-smart_open noarch 6.4.0-2.fc39 copr_base 107 k python3-stopit noarch 1.1.2-8.fc39 copr_base 26 k python3-tabulate noarch 0.9.0-4.fc39 fedora 69 k python3-throttler noarch 1.2.2-6.fc39 fedora 27 k python3-toposort noarch 1.10-8.fc39 copr_base 20 k python3-wrapt x86_64 1.16.0-1.fc39 copr_base 67 k python3-yte noarch 1.5.4-1.fc39 updates 36 k Installing dependencies: abseil-cpp x86_64 20230802.1-1.fc39 fedora 678 k c-ares x86_64 1.21.0-1.fc39 updates 126 k git-core x86_64 2.43.0-1.fc39 updates 4.5 M google-crc32c x86_64 1.1.2-7.fc39 fedora 22 k grpc-data noarch 1.48.4-29.fc39 copr_base 24 k less x86_64 633-2.fc39 fedora 175 k libcbor x86_64 0.10.2-2.fc39 fedora 58 k libedit x86_64 3.1-48.20230828cvs.fc39 fedora 107 k libfido2 x86_64 1.13.0-3.fc39 fedora 98 k openssh x86_64 9.3p1-9.fc39 fedora 438 k openssh-clients x86_64 9.3p1-9.fc39 fedora 734 k protobuf x86_64 3.19.6-6.fc39 copr_base 1.0 M python3-adal noarch 1.2.7-13.fc39 fedora 105 k python3-attrs noarch 23.1.0-4.fc39 fedora 123 k python3-azure-common noarch 1:1.1.28-6.fc39 fedora 39 k python3-azure-mgmt-core noarch 1:1.3.2-9.fc39 fedora 47 k python3-boto noarch 2.49.0-18.fc39 fedora 1.8 M python3-cachetools noarch 5.3.2-1.fc39 copr_base 38 k python3-certifi noarch 2023.05.07-2.fc39 fedora 14 k python3-cffi x86_64 1.16.0-2.fc39 copr_base 296 k python3-cryptography x86_64 41.0.5-2.fc39 copr_base 1.2 M python3-dpath noarch 2.1.4-3.fc39 copr_base 38 k python3-fasteners noarch 0.19-1.fc39 copr_base 44 k python3-fastjsonschema noarch 2.16.3-3.fc39 fedora 63 k python3-gitdb noarch 4.0.10-3.fc39 fedora 142 k python3-google-api-core noarch 1:2.11.1-5.fc39 fedora 201 k python3-google-auth noarch 1:2.26.0-1.fc39 copr_base 243 k python3-google-auth-httplib2 noarch 0.2.0-1.fc39 copr_base 21 k python3-google-cloud-core noarch 2.3.3-2.fc39 fedora 72 k python3-google-resumable-media noarch 2.6.0-1.fc39 fedora 98 k python3-googleapis-common-protos noarch 1.62.0-5.fc39 copr_base 183 k python3-grpcio x86_64 1.48.4-29.fc39 copr_base 2.3 M python3-grpcio-status noarch 1.48.4-29.fc39 copr_base 22 k python3-httplib2 noarch 0.21.0-4.fc39 fedora 139 k python3-isodate noarch 0.6.1-9.fc39 fedora 77 k python3-jsonschema-specifications noarch 2023.7.1-1.fc39 fedora 26 k python3-jupyter-core noarch 5.1.0-5.fc39 fedora 141 k python3-jwt noarch 2.6.0-4.fc39 fedora 61 k python3-jwt+crypto noarch 2.6.0-4.fc39 fedora 8.9 k python3-msal noarch 1.26.0-2.fc39 copr_base 171 k python3-msal-extensions noarch 1.0.0-7.fc39 fedora 47 k python3-msrest noarch 0.7.1-8.20221014git2d8fd04.fc39 fedora 151 k python3-msrestazure noarch 0.6.4-18.fc39 fedora 78 k python3-oauthlib noarch 3.2.2-1.fc39 fedora 242 k python3-plac noarch 1.4.2-1.fc39 updates 65 k python3-platformdirs noarch 3.11.0-1.fc39 copr_base 40 k python3-ply noarch 3.11-20.fc39 copr_base 131 k python3-portalocker noarch 2.8.2-2.fc39 fedora 50 k python3-protobuf x86_64 3.19.6-6.fc39 copr_base 390 k python3-pyOpenSSL noarch 23.2.0-1.fc39 copr_base 121 k python3-pyasn1 noarch 0.5.1-1.fc39 copr_base 180 k python3-pyasn1-modules noarch 0.5.1-1.fc39 copr_base 313 k python3-pycparser noarch 2.20-11.fc39 copr_base 144 k python3-pyparsing noarch 3.1.1-1.fc39 copr_base 261 k python3-referencing noarch 0.30.2-1.fc39 fedora 81 k python3-requests-oauthlib noarch 1.3.1-6.fc39 fedora 57 k python3-rpds-py x86_64 0.13.2-1.fc39 updates 283 k python3-rsa noarch 4.9-3.fc39 copr_base 70 k python3-smmap noarch 5.0.0-6.fc39 fedora 62 k python3-traitlets noarch 5.11.2-1.fc39 copr_base 192 k python3-typing-extensions noarch 4.9.0-1.fc39 copr_base 77 k python3-uritemplate noarch 4.1.1-6.fc39 fedora 40 k python3-zombie-imp noarch 0.0.2-2.fc39 fedora 29 k re2 x86_64 1:20220601-3.fc39 fedora 200 k Transaction Summary ============================================================================================= Install 90 Packages Total download size: 27 M Installed size: 189 M Downloading Packages: (1/90): grpc-data-1.48.4-29.fc39.noarch.rpm 734 kB/s | 24 kB 00:00 (2/90): python3-GitPython-3.1.40-1.fc39.noarch. 5.0 MB/s | 362 kB 00:00 (3/90): python3-azure-batch-14.0.0-1.fc39.noarc 3.7 MB/s | 207 kB 00:00 (4/90): python3-cachetools-5.3.2-1.fc39.noarch. 2.9 MB/s | 38 kB 00:00 (5/90): python3-azure-identity-1.14.0-1.fc39.no 5.8 MB/s | 200 kB 00:00 (6/90): protobuf-3.19.6-6.fc39.x86_64.rpm 8.6 MB/s | 1.0 MB 00:00 (7/90): python3-cffi-1.16.0-2.fc39.x86_64.rpm 9.1 MB/s | 296 kB 00:00 (8/90): python3-connection_pool-0.0.3-9.fc39.no 628 kB/s | 17 kB 00:00 (9/90): python3-cryptography-41.0.5-2.fc39.x86_ 29 MB/s | 1.2 MB 00:00 (10/90): python3-dpath-2.1.4-3.fc39.noarch.rpm 1.6 MB/s | 38 kB 00:00 (11/90): python3-datrie-0.8.2-22.fc39.x86_64.rp 3.1 MB/s | 158 kB 00:00 (12/90): python3-fasteners-0.19-1.fc39.noarch.r 1.0 MB/s | 44 kB 00:00 (13/90): python3-google-auth-2.26.0-1.fc39.noar 9.3 MB/s | 243 kB 00:00 (14/90): python3-google-auth-httplib2-0.2.0-1.f 522 kB/s | 21 kB 00:00 (15/90): python3-google-cloud-storage-2.14.0-2. 5.8 MB/s | 190 kB 00:00 (16/90): python3-google-api-client-2.112.0-1.fc 47 MB/s | 4.7 MB 00:00 (17/90): python3-googleapis-common-protos-1.62. 11 MB/s | 183 kB 00:00 (18/90): python3-grpcio-1.48.4-29.fc39.x86_64.r 48 MB/s | 2.3 MB 00:00 (19/90): python3-grpcio-status-1.48.4-29.fc39.n 687 kB/s | 22 kB 00:00 (20/90): python3-humanfriendly-10.0-8.fc39.noar 4.0 MB/s | 132 kB 00:00 (21/90): python3-ply-3.11-20.fc39.noarch.rpm 11 MB/s | 131 kB 00:00 (22/90): python3-platformdirs-3.11.0-1.fc39.noa 2.8 MB/s | 40 kB 00:00 (23/90): python3-msal-1.26.0-2.fc39.noarch.rpm 6.4 MB/s | 171 kB 00:00 (24/90): python3-psutil-5.9.5-2.fc39.x86_64.rpm 12 MB/s | 260 kB 00:00 (25/90): python3-protobuf-3.19.6-6.fc39.x86_64. 15 MB/s | 390 kB 00:00 (26/90): python3-pyOpenSSL-23.2.0-1.fc39.noarch 6.3 MB/s | 121 kB 00:00 (27/90): python3-pyasn1-modules-0.5.1-1.fc39.no 19 MB/s | 313 kB 00:00 (28/90): python3-pyasn1-0.5.1-1.fc39.noarch.rpm 7.0 MB/s | 180 kB 00:00 (29/90): python3-pyparsing-3.1.1-1.fc39.noarch. 21 MB/s | 261 kB 00:00 (30/90): python3-rsa-4.9-3.fc39.noarch.rpm 3.7 MB/s | 70 kB 00:00 (31/90): python3-pycparser-2.20-11.fc39.noarch. 3.9 MB/s | 144 kB 00:00 (32/90): python3-smart_open-6.4.0-2.fc39.noarch 4.1 MB/s | 107 kB 00:00 (33/90): python3-toposort-1.10-8.fc39.noarch.rp 1.1 MB/s | 20 kB 00:00 (34/90): python3-stopit-1.1.2-8.fc39.noarch.rpm 1.1 MB/s | 26 kB 00:00 (35/90): python3-traitlets-5.11.2-1.fc39.noarch 14 MB/s | 192 kB 00:00 (36/90): python3-wrapt-1.16.0-1.fc39.x86_64.rpm 4.6 MB/s | 67 kB 00:00 (37/90): python3-typing-extensions-4.9.0-1.fc39 3.1 MB/s | 77 kB 00:00 (38/90): google-crc32c-1.1.2-7.fc39.x86_64.rpm 317 kB/s | 22 kB 00:00 (39/90): less-633-2.fc39.x86_64.rpm 2.0 MB/s | 175 kB 00:00 (40/90): libcbor-0.10.2-2.fc39.x86_64.rpm 2.0 MB/s | 58 kB 00:00 (41/90): abseil-cpp-20230802.1-1.fc39.x86_64.rp 5.9 MB/s | 678 kB 00:00 (42/90): libedit-3.1-48.20230828cvs.fc39.x86_64 7.4 MB/s | 107 kB 00:00 (43/90): libfido2-1.13.0-3.fc39.x86_64.rpm 7.7 MB/s | 98 kB 00:00 (44/90): openssh-9.3p1-9.fc39.x86_64.rpm 26 MB/s | 438 kB 00:00 (45/90): openssh-clients-9.3p1-9.fc39.x86_64.rp 29 MB/s | 734 kB 00:00 (46/90): python3-adal-1.2.7-13.fc39.noarch.rpm 3.7 MB/s | 105 kB 00:00 (47/90): python3-attrs-23.1.0-4.fc39.noarch.rpm 5.1 MB/s | 123 kB 00:00 (48/90): python3-azure-common-1.1.28-6.fc39.noa 2.9 MB/s | 39 kB 00:00 (49/90): python3-azure-core-1.28.0-3.fc39.noarc 8.7 MB/s | 295 kB 00:00 (50/90): python3-azure-mgmt-batch-17.0.0-5.fc39 4.0 MB/s | 214 kB 00:00 (51/90): python3-azure-mgmt-core-1.3.2-9.fc39.n 903 kB/s | 47 kB 00:00 (52/90): python3-azure-storage-blob-12.14.1-4.f 11 MB/s | 546 kB 00:00 (53/90): python3-boto-2.49.0-18.fc39.noarch.rpm 26 MB/s | 1.8 MB 00:00 (54/90): python3-certifi-2023.05.07-2.fc39.noar 211 kB/s | 14 kB 00:00 (55/90): python3-fastjsonschema-2.16.3-3.fc39.n 1.5 MB/s | 63 kB 00:00 (56/90): python3-gitdb-4.0.10-3.fc39.noarch.rpm 3.9 MB/s | 142 kB 00:00 (57/90): python3-google-api-core-2.11.1-5.fc39. 3.9 MB/s | 201 kB 00:00 (58/90): python3-google-cloud-core-2.3.3-2.fc39 1.1 MB/s | 72 kB 00:00 (59/90): python3-google-crc32c-1.1.2-9.fc39.x86 984 kB/s | 36 kB 00:00 (60/90): python3-google-resumable-media-2.6.0-1 3.1 MB/s | 98 kB 00:00 (61/90): python3-httplib2-0.21.0-4.fc39.noarch. 6.3 MB/s | 139 kB 00:00 (62/90): python3-isodate-0.6.1-9.fc39.noarch.rp 4.6 MB/s | 77 kB 00:00 (63/90): python3-jsonschema-specifications-2023 2.1 MB/s | 26 kB 00:00 (64/90): python3-jupyter-core-5.1.0-5.fc39.noar 5.0 MB/s | 141 kB 00:00 (65/90): python3-jwt+crypto-2.6.0-4.fc39.noarch 322 kB/s | 8.9 kB 00:00 (66/90): python3-jwt-2.6.0-4.fc39.noarch.rpm 2.7 MB/s | 61 kB 00:00 (67/90): python3-msal-extensions-1.0.0-7.fc39.n 1.5 MB/s | 47 kB 00:00 (68/90): python3-msrest-0.7.1-8.20221014git2d8f 3.4 MB/s | 151 kB 00:00 (69/90): python3-msrestazure-0.6.4-18.fc39.noar 1.3 MB/s | 78 kB 00:00 (70/90): python3-nbformat-5.9.1-2.fc39.noarch.r 4.7 MB/s | 143 kB 00:00 (71/90): python3-oauth2client-4.1.3-23.fc39.noa 7.4 MB/s | 184 kB 00:00 (72/90): python3-oauthlib-3.2.2-1.fc39.noarch.r 16 MB/s | 242 kB 00:00 (73/90): python3-portalocker-2.8.2-2.fc39.noarc 3.3 MB/s | 50 kB 00:00 (74/90): python3-pulp-2.7.0-3.fc39.noarch.rpm 4.4 MB/s | 209 kB 00:00 (75/90): python3-referencing-0.30.2-1.fc39.noar 1.9 MB/s | 81 kB 00:00 (76/90): python3-requests-oauthlib-1.3.1-6.fc39 1.1 MB/s | 57 kB 00:00 (77/90): python3-reretry-0.11.8-5.fc39.noarch.r 731 kB/s | 18 kB 00:00 (78/90): python3-slacker-0.14.0-12.fc39.noarch. 963 kB/s | 35 kB 00:00 (79/90): python3-smmap-5.0.0-6.fc39.noarch.rpm 2.1 MB/s | 62 kB 00:00 (80/90): python3-tabulate-0.9.0-4.fc39.noarch.r 4.4 MB/s | 69 kB 00:00 (81/90): python3-throttler-1.2.2-6.fc39.noarch. 1.4 MB/s | 27 kB 00:00 (82/90): python3-uritemplate-4.1.1-6.fc39.noarc 2.1 MB/s | 40 kB 00:00 (83/90): python3-zombie-imp-0.0.2-2.fc39.noarch 1.6 MB/s | 29 kB 00:00 (84/90): re2-20220601-3.fc39.x86_64.rpm 14 MB/s | 200 kB 00:00 (85/90): c-ares-1.21.0-1.fc39.x86_64.rpm 600 kB/s | 126 kB 00:00 (86/90): python3-jsonschema-4.19.1-1.fc39.noarc 936 kB/s | 202 kB 00:00 (87/90): python3-plac-1.4.2-1.fc39.noarch.rpm 1.0 MB/s | 65 kB 00:00 (88/90): python3-rpds-py-0.13.2-1.fc39.x86_64.r 3.8 MB/s | 283 kB 00:00 (89/90): python3-yte-1.5.4-1.fc39.noarch.rpm 420 kB/s | 36 kB 00:00 (90/90): git-core-2.43.0-1.fc39.x86_64.rpm 11 MB/s | 4.5 MB 00:00 -------------------------------------------------------------------------------- Total 19 MB/s | 27 MB 00:01 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-pyasn1-0.5.1-1.fc39.noarch 1/90 Installing : python3-rsa-4.9-3.fc39.noarch 2/90 Installing : python3-pyasn1-modules-0.5.1-1.fc39.noarch 3/90 Installing : python3-rpds-py-0.13.2-1.fc39.x86_64 4/90 Installing : python3-azure-common-1:1.1.28-6.fc39.noarch 5/90 Installing : python3-attrs-23.1.0-4.fc39.noarch 6/90 Installing : python3-referencing-0.30.2-1.fc39.noarch 7/90 Installing : python3-traitlets-5.11.2-1.fc39.noarch 8/90 Installing : python3-jsonschema-specifications-2023.7.1-1.fc39. 9/90 Installing : python3-jsonschema-4.19.1-1.fc39.noarch 10/90 Installing : python3-plac-1.4.2-1.fc39.noarch 11/90 Installing : c-ares-1.21.0-1.fc39.x86_64 12/90 Installing : re2-1:20220601-3.fc39.x86_64 13/90 Installing : python3-zombie-imp-0.0.2-2.fc39.noarch 14/90 Installing : python3-boto-2.49.0-18.fc39.noarch 15/90 Installing : python3-uritemplate-4.1.1-6.fc39.noarch 16/90 Installing : python3-smmap-5.0.0-6.fc39.noarch 17/90 Installing : python3-gitdb-4.0.10-3.fc39.noarch 18/90 Installing : python3-portalocker-2.8.2-2.fc39.noarch 19/90 Installing : python3-oauthlib-3.2.2-1.fc39.noarch 20/90 Installing : python3-requests-oauthlib-1.3.1-6.fc39.noarch 21/90 Installing : python3-isodate-0.6.1-9.fc39.noarch 22/90 Installing : python3-fastjsonschema-2.16.3-3.fc39.noarch 23/90 Installing : python3-certifi-2023.05.07-2.fc39.noarch 24/90 Installing : openssh-9.3p1-9.fc39.x86_64 25/90 Installing : libedit-3.1-48.20230828cvs.fc39.x86_64 26/90 Installing : libcbor-0.10.2-2.fc39.x86_64 27/90 Installing : libfido2-1.13.0-3.fc39.x86_64 28/90 Installing : openssh-clients-9.3p1-9.fc39.x86_64 29/90 Running scriptlet: openssh-clients-9.3p1-9.fc39.x86_64 29/90 Installing : less-633-2.fc39.x86_64 30/90 Installing : git-core-2.43.0-1.fc39.x86_64 31/90 Installing : google-crc32c-1.1.2-7.fc39.x86_64 32/90 Installing : abseil-cpp-20230802.1-1.fc39.x86_64 33/90 Installing : python3-typing-extensions-4.9.0-1.fc39.noarch 34/90 Installing : python3-azure-core-2:1.28.0-3.fc39.noarch 35/90 Installing : python3-msrest-0.7.1-8.20221014git2d8fd04.fc39.noa 36/90 Installing : python3-azure-mgmt-core-1:1.3.2-9.fc39.noarch 37/90 Installing : python3-pyparsing-3.1.1-1.fc39.noarch 38/90 Installing : python3-httplib2-0.21.0-4.fc39.noarch 39/90 Installing : python3-ply-3.11-20.fc39.noarch 40/90 Installing : python3-pycparser-2.20-11.fc39.noarch 41/90 Installing : python3-cffi-1.16.0-2.fc39.x86_64 42/90 Installing : python3-cryptography-41.0.5-2.fc39.x86_64 43/90 Installing : python3-jwt-2.6.0-4.fc39.noarch 44/90 Installing : python3-jwt+crypto-2.6.0-4.fc39.noarch 45/90 Installing : python3-msal-1.26.0-2.fc39.noarch 46/90 Installing : python3-google-crc32c-1.1.2-9.fc39.x86_64 47/90 Installing : python3-google-resumable-media-2.6.0-1.fc39.noarch 48/90 Installing : python3-msal-extensions-1.0.0-7.fc39.noarch 49/90 Installing : python3-adal-1.2.7-13.fc39.noarch 50/90 Installing : python3-msrestazure-0.6.4-18.fc39.noarch 51/90 Installing : python3-pyOpenSSL-23.2.0-1.fc39.noarch 52/90 Installing : python3-platformdirs-3.11.0-1.fc39.noarch 53/90 Installing : python3-jupyter-core-5.1.0-5.fc39.noarch 54/90 Installing : python3-fasteners-0.19-1.fc39.noarch 55/90 Installing : python3-dpath-2.1.4-3.fc39.noarch 56/90 Installing : python3-cachetools-5.3.2-1.fc39.noarch 57/90 Installing : python3-google-auth-1:2.26.0-1.fc39.noarch 58/90 Installing : python3-google-auth-httplib2-0.2.0-1.fc39.noarch 59/90 Installing : protobuf-3.19.6-6.fc39.x86_64 60/90 Installing : python3-protobuf-3.19.6-6.fc39.x86_64 61/90 Installing : python3-googleapis-common-protos-1.62.0-5.fc39.noa 62/90 Installing : grpc-data-1.48.4-29.fc39.noarch 63/90 Installing : python3-grpcio-1.48.4-29.fc39.x86_64 64/90 Installing : python3-grpcio-status-1.48.4-29.fc39.noarch 65/90 Installing : python3-google-api-core-1:2.11.1-5.fc39.noarch 66/90 Installing : python3-google-cloud-core-2.3.3-2.fc39.noarch 67/90 Installing : python3-google-cloud-storage-2.14.0-2.fc39.noarch 68/90 Installing : python3-google-api-client-2:2.112.0-1.fc39.noarch 69/90 Installing : python3-yte-1.5.4-1.fc39.noarch 70/90 Installing : python3-oauth2client-4.1.3-23.fc39.noarch 71/90 Installing : python3-nbformat-5.9.1-2.fc39.noarch 72/90 Installing : python3-azure-batch-14.0.0-1.fc39.noarch 73/90 Installing : python3-azure-identity-1:1.14.0-1.fc39.noarch 74/90 Installing : python3-azure-storage-blob-12.14.1-4.fc39.noarch 75/90 Installing : python3-azure-mgmt-batch-17.0.0-5.fc39.noarch 76/90 Installing : python3-GitPython-3.1.40-1.fc39.noarch 77/90 Installing : python3-smart_open-6.4.0-2.fc39.noarch 78/90 Installing : python3-throttler-1.2.2-6.fc39.noarch 79/90 Installing : python3-tabulate-0.9.0-4.fc39.noarch 80/90 Installing : python3-slacker-0.14.0-12.fc39.noarch 81/90 Installing : python3-reretry-0.11.8-5.fc39.noarch 82/90 Installing : python3-pulp-2.7.0-3.fc39.noarch 83/90 Installing : python3-wrapt-1.16.0-1.fc39.x86_64 84/90 Installing : python3-toposort-1.10-8.fc39.noarch 85/90 Installing : python3-stopit-1.1.2-8.fc39.noarch 86/90 Installing : python3-psutil-5.9.5-2.fc39.x86_64 87/90 Installing : python3-humanfriendly-10.0-8.fc39.noarch 88/90 Installing : python3-datrie-0.8.2-22.fc39.x86_64 89/90 Installing : python3-connection_pool-0.0.3-9.fc39.noarch 90/90 Running scriptlet: python3-connection_pool-0.0.3-9.fc39.noarch 90/90 Installed: abseil-cpp-20230802.1-1.fc39.x86_64 c-ares-1.21.0-1.fc39.x86_64 git-core-2.43.0-1.fc39.x86_64 google-crc32c-1.1.2-7.fc39.x86_64 grpc-data-1.48.4-29.fc39.noarch less-633-2.fc39.x86_64 libcbor-0.10.2-2.fc39.x86_64 libedit-3.1-48.20230828cvs.fc39.x86_64 libfido2-1.13.0-3.fc39.x86_64 openssh-9.3p1-9.fc39.x86_64 openssh-clients-9.3p1-9.fc39.x86_64 protobuf-3.19.6-6.fc39.x86_64 python3-GitPython-3.1.40-1.fc39.noarch python3-adal-1.2.7-13.fc39.noarch python3-attrs-23.1.0-4.fc39.noarch python3-azure-batch-14.0.0-1.fc39.noarch python3-azure-common-1:1.1.28-6.fc39.noarch python3-azure-core-2:1.28.0-3.fc39.noarch python3-azure-identity-1:1.14.0-1.fc39.noarch python3-azure-mgmt-batch-17.0.0-5.fc39.noarch python3-azure-mgmt-core-1:1.3.2-9.fc39.noarch python3-azure-storage-blob-12.14.1-4.fc39.noarch python3-boto-2.49.0-18.fc39.noarch python3-cachetools-5.3.2-1.fc39.noarch python3-certifi-2023.05.07-2.fc39.noarch python3-cffi-1.16.0-2.fc39.x86_64 python3-connection_pool-0.0.3-9.fc39.noarch python3-cryptography-41.0.5-2.fc39.x86_64 python3-datrie-0.8.2-22.fc39.x86_64 python3-dpath-2.1.4-3.fc39.noarch python3-fasteners-0.19-1.fc39.noarch python3-fastjsonschema-2.16.3-3.fc39.noarch python3-gitdb-4.0.10-3.fc39.noarch python3-google-api-client-2:2.112.0-1.fc39.noarch python3-google-api-core-1:2.11.1-5.fc39.noarch python3-google-auth-1:2.26.0-1.fc39.noarch python3-google-auth-httplib2-0.2.0-1.fc39.noarch python3-google-cloud-core-2.3.3-2.fc39.noarch python3-google-cloud-storage-2.14.0-2.fc39.noarch python3-google-crc32c-1.1.2-9.fc39.x86_64 python3-google-resumable-media-2.6.0-1.fc39.noarch python3-googleapis-common-protos-1.62.0-5.fc39.noarch python3-grpcio-1.48.4-29.fc39.x86_64 python3-grpcio-status-1.48.4-29.fc39.noarch python3-httplib2-0.21.0-4.fc39.noarch python3-humanfriendly-10.0-8.fc39.noarch python3-isodate-0.6.1-9.fc39.noarch python3-jsonschema-4.19.1-1.fc39.noarch python3-jsonschema-specifications-2023.7.1-1.fc39.noarch python3-jupyter-core-5.1.0-5.fc39.noarch python3-jwt-2.6.0-4.fc39.noarch python3-jwt+crypto-2.6.0-4.fc39.noarch python3-msal-1.26.0-2.fc39.noarch python3-msal-extensions-1.0.0-7.fc39.noarch python3-msrest-0.7.1-8.20221014git2d8fd04.fc39.noarch python3-msrestazure-0.6.4-18.fc39.noarch python3-nbformat-5.9.1-2.fc39.noarch python3-oauth2client-4.1.3-23.fc39.noarch python3-oauthlib-3.2.2-1.fc39.noarch python3-plac-1.4.2-1.fc39.noarch python3-platformdirs-3.11.0-1.fc39.noarch python3-ply-3.11-20.fc39.noarch python3-portalocker-2.8.2-2.fc39.noarch python3-protobuf-3.19.6-6.fc39.x86_64 python3-psutil-5.9.5-2.fc39.x86_64 python3-pulp-2.7.0-3.fc39.noarch python3-pyOpenSSL-23.2.0-1.fc39.noarch python3-pyasn1-0.5.1-1.fc39.noarch python3-pyasn1-modules-0.5.1-1.fc39.noarch python3-pycparser-2.20-11.fc39.noarch python3-pyparsing-3.1.1-1.fc39.noarch python3-referencing-0.30.2-1.fc39.noarch python3-requests-oauthlib-1.3.1-6.fc39.noarch python3-reretry-0.11.8-5.fc39.noarch python3-rpds-py-0.13.2-1.fc39.x86_64 python3-rsa-4.9-3.fc39.noarch python3-slacker-0.14.0-12.fc39.noarch python3-smart_open-6.4.0-2.fc39.noarch python3-smmap-5.0.0-6.fc39.noarch python3-stopit-1.1.2-8.fc39.noarch python3-tabulate-0.9.0-4.fc39.noarch python3-throttler-1.2.2-6.fc39.noarch python3-toposort-1.10-8.fc39.noarch python3-traitlets-5.11.2-1.fc39.noarch python3-typing-extensions-4.9.0-1.fc39.noarch python3-uritemplate-4.1.1-6.fc39.noarch python3-wrapt-1.16.0-1.fc39.x86_64 python3-yte-1.5.4-1.fc39.noarch python3-zombie-imp-0.0.2-2.fc39.noarch re2-1:20220601-3.fc39.x86_64 Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.4WAlIr + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.1) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.5) Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp >=2.0 (installed: pulp 2.7.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open >=3.0 (installed: smart-open 6.4.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort >=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-storage-blob ; extra == 'azure' (installed: azure-storage-blob 12.14.1) Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-batch ; extra == 'azure' (installed: azure-batch 14.0.0) Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-core ; extra == 'azure' (installed: azure-core 1.28.0) Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-identity ; extra == 'azure' (installed: azure-identity 1.14.0) Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-mgmt-batch ; extra == 'azure' (installed: azure-mgmt-batch 17.0.0) Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-api-python-client ; extra == 'google-cloud' (installed: google-api-python-client 2.112.0) Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-cloud-storage ; extra == 'google-cloud' (installed: google-cloud-storage 2.14.0) Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-crc32c ; extra == 'google-cloud' (installed: google-crc32c 1.1.2) Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: oauth2client ; extra == 'google-cloud' (installed: oauth2client 4.1.3) Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slacker ; extra == 'messaging' (installed: slacker 0.14.0) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc39.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 45 kB/s | 1.5 kB 00:00 fedora 800 kB/s | 25 kB 00:00 updates 776 kB/s | 22 kB 00:00 Package python3-jinja2-3.1.2-5.fc39.noarch is already installed. Package python3-yte-1.5.4-1.fc39.noarch is already installed. Package librsvg2-tools-2.57.1-1.fc39.x86_64 is already installed. Package texlive-xindy-11:svn65958-77.fc39.x86_64 is already installed. Package help2man-1.49.3-3.fc39.noarch is already installed. Package latexmk-4.82-1.fc39.noarch is already installed. Package make-1:4.4.1-2.fc39.x86_64 is already installed. Package pyproject-rpm-macros-1.11.0-1.fc39.noarch is already installed. Package python3-devel-3.12.1-2.fc39.x86_64 is already installed. Package python3-devel-3.12.1-2.fc39.x86_64 is already installed. Package python3-sphinx-latex-1:7.2.6-3.fc39.noarch is already installed. Package python3-appdirs-1.4.4-11.fc39.noarch is already installed. Package python3-azure-batch-14.0.0-1.fc39.noarch is already installed. Package python3-azure-core-2:1.28.0-3.fc39.noarch is already installed. Package python3-azure-identity-1:1.14.0-1.fc39.noarch is already installed. Package python3-azure-mgmt-batch-17.0.0-5.fc39.noarch is already installed. Package python3-azure-storage-blob-12.14.1-4.fc39.noarch is already installed. Package python3-boto3-1.34.11-2.fc39.noarch is already installed. Package python3-configargparse-1.7-1.fc39.noarch is already installed. Package python3-configargparse-1.7-1.fc39.noarch is already installed. Package python3-connection_pool-0.0.3-9.fc39.noarch is already installed. Package python3-datrie-0.8.2-22.fc39.x86_64 is already installed. Package python3-docutils-0.20.1-1.fc39.noarch is already installed. Package python3-GitPython-3.1.40-1.fc39.noarch is already installed. Package python3-google-api-client-2:2.112.0-1.fc39.noarch is already installed. Package python3-google-cloud-storage-2.14.0-2.fc39.noarch is already installed. Package python3-google-crc32c-1.1.2-9.fc39.x86_64 is already installed. Package python3-humanfriendly-10.0-8.fc39.noarch is already installed. Package python3-jsonschema-4.19.1-1.fc39.noarch is already installed. Package python3-myst-parser-2.0.0-2.fc39.noarch is already installed. Package python3-nbformat-5.9.1-2.fc39.noarch is already installed. Package python3-oauth2client-4.1.3-23.fc39.noarch is already installed. Package python3-packaging-23.2-2.fc39.noarch is already installed. Package python3-pandas-1.5.3-7.fc39~bootstrap.x86_64 is already installed. Package python3-pip-23.3.1-2.fc39.noarch is already installed. Package python3-psutil-5.9.5-2.fc39.x86_64 is already installed. Package python3-pulp-2.7.0-3.fc39.noarch is already installed. Package python3-pygments-2.17.2-1.fc39.noarch is already installed. Package python3-pytest-7.4.3-1.fc39.noarch is already installed. Package python3-pyyaml-6.0.1-11.fc39.x86_64 is already installed. Package python3-requests-2.28.2-7.fc39.noarch is already installed. Package python3-requests-mock-1.10.0-5.fc39.noarch is already installed. Package python3-reretry-0.11.8-5.fc39.noarch is already installed. Package python3-setuptools-68.2.2-1.fc39.noarch is already installed. Package python3-slacker-0.14.0-12.fc39.noarch is already installed. Package python3-smart_open-6.4.0-2.fc39.noarch is already installed. Package python3-sphinx-1:7.2.6-3.fc39.noarch is already installed. Package python3-sphinx-argparse-0.4.0-4.fc39.noarch is already installed. Package python3-sphinx_rtd_theme-2.0.0-1.fc39.noarch is already installed. Package python3-stopit-1.1.2-8.fc39.noarch is already installed. Package python3-tabulate-0.9.0-4.fc39.noarch is already installed. Package python3-throttler-1.2.2-6.fc39.noarch is already installed. Package python3-toposort-1.10-8.fc39.noarch is already installed. Package python3-wheel-1:0.41.2-1.fc39.noarch is already installed. Package python3-wrapt-1.16.0-1.fc39.x86_64 is already installed. Package texlive-xetex-11:svn66203-77.fc39.x86_64 is already installed. Package vim-filesystem-2:9.0.2167-1.fc39.noarch is already installed. Dependencies resolved. Nothing to do. Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.pBBYyr + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.1) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.5) Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp >=2.0 (installed: pulp 2.7.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open >=3.0 (installed: smart-open 6.4.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort >=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-storage-blob ; extra == 'azure' (installed: azure-storage-blob 12.14.1) Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-batch ; extra == 'azure' (installed: azure-batch 14.0.0) Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-core ; extra == 'azure' (installed: azure-core 1.28.0) Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-identity ; extra == 'azure' (installed: azure-identity 1.14.0) Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-mgmt-batch ; extra == 'azure' (installed: azure-mgmt-batch 17.0.0) Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-api-python-client ; extra == 'google-cloud' (installed: google-api-python-client 2.112.0) Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-cloud-storage ; extra == 'google-cloud' (installed: google-cloud-storage 2.14.0) Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-crc32c ; extra == 'google-cloud' (installed: google-crc32c 1.1.2) Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: oauth2client ; extra == 'google-cloud' (installed: oauth2client 4.1.3) Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slacker ; extra == 'messaging' (installed: slacker 0.14.0) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.6dZ4O3 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir Processing /builddir/build/BUILD/snakemake-7.32.4 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info writing /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-5m_sq345/snakemake-7.32.4.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: snakemake Building wheel for snakemake (pyproject.toml): started Running command Building wheel for snakemake (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/stats.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/script.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/profiles.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/interfaces.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report creating build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote creating build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting creating build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors copying snakemake/executors/google_lifesciences.py -> build/lib/snakemake/executors copying snakemake/executors/ga4gh_tes.py -> build/lib/snakemake/executors copying snakemake/executors/flux.py -> build/lib/snakemake/executors copying snakemake/executors/common.py -> build/lib/snakemake/executors copying snakemake/executors/azure_batch.py -> build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors creating build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment creating build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common creating build/lib/snakemake/caching copying snakemake/caching/remote.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates creating build/lib/snakemake/report/template copying snakemake/report/template/__init__.py -> build/lib/snakemake/report/template creating build/lib/snakemake/report/data copying snakemake/report/data/timeline.py -> build/lib/snakemake/report/data copying snakemake/report/data/runtimes.py -> build/lib/snakemake/report/data copying snakemake/report/data/rules.py -> build/lib/snakemake/report/data copying snakemake/report/data/rulegraph.py -> build/lib/snakemake/report/data copying snakemake/report/data/results.py -> build/lib/snakemake/report/data copying snakemake/report/data/packages.py -> build/lib/snakemake/report/data copying snakemake/report/data/common.py -> build/lib/snakemake/report/data copying snakemake/report/data/categories.py -> build/lib/snakemake/report/data copying snakemake/report/data/__init__.py -> build/lib/snakemake/report/data creating build/lib/snakemake/report/template/components copying snakemake/report/template/components/__init__.py -> build/lib/snakemake/report/template/components creating build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/slurm_submit.py -> build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/slurm_jobstep.py -> build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/__init__.py -> build/lib/snakemake/executors/slurm copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/report/template/style.css -> build/lib/snakemake/report/template copying snakemake/report/template/index.html.jinja2 -> build/lib/snakemake/report/template copying snakemake/report/template/logo.svg -> build/lib/snakemake/report/template copying snakemake/report/template/components/subcategory.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/stats.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/search_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_graph.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_view_button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/report_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/navbar.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/menu.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_item.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_heading.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/icon.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/content.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/common.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/category.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/breadcrumbs.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/app.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_menu.js -> build/lib/snakemake/report/template/components UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '7.32.4' installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/_version.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/gui.html -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/report.css -> build/bdist.linux-x86_64/wheel/snakemake creating build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-x86_64/wheel/snakemake/caching copying build/lib/snakemake/caching/remote.py -> build/bdist.linux-x86_64/wheel/snakemake/caching creating build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-x86_64/wheel/snakemake/common creating build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment creating build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-x86_64/wheel/snakemake/executors creating build/bdist.linux-x86_64/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/slurm_jobstep.py -> build/bdist.linux-x86_64/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/slurm_submit.py -> build/bdist.linux-x86_64/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/azure_batch.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/common.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/flux.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/ga4gh_tes.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences.py -> build/bdist.linux-x86_64/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-x86_64/wheel/snakemake/executors creating build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-x86_64/wheel/snakemake/linting creating build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-x86_64/wheel/snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-x86_64/wheel/snakemake/remote creating build/bdist.linux-x86_64/wheel/snakemake/report creating build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/categories.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/packages.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/results.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rulegraph.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/runtimes.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data copying build/lib/snakemake/report/data/timeline.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data creating build/bdist.linux-x86_64/wheel/snakemake/report/template copying build/lib/snakemake/report/template/logo.svg -> build/bdist.linux-x86_64/wheel/snakemake/report/template copying build/lib/snakemake/report/template/index.html.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/report/template copying build/lib/snakemake/report/template/style.css -> build/bdist.linux-x86_64/wheel/snakemake/report/template creating build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/app.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/breadcrumbs.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/category.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/common.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/content.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/icon.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_heading.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_item.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/navbar.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/report_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_view_button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_graph.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/search_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/stats.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/subcategory.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/template copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-x86_64/wheel/snakemake/report creating build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests copying build/lib/snakemake/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/__main__.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/exceptions.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/interfaces.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/io.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/profiles.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/script.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/stats.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-x86_64/wheel/snakemake copying build/lib/snakemake/wrapper.py -> build/bdist.linux-x86_64/wheel/snakemake running install_egg_info running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to build/bdist.linux-x86_64/wheel/snakemake-7.32.4-py3.12.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/snakemake-7.32.4.dist-info/WHEEL creating '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-wheel-n037w4dq/.tmp-bc1gaw_4/snakemake-7.32.4-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.html' adding 'snakemake/gui.py' adding 'snakemake/interfaces.py' adding 'snakemake/io.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/profiles.py' adding 'snakemake/report.css' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/script.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/stats.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/remote.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/azure_batch.py' adding 'snakemake/executors/common.py' adding 'snakemake/executors/flux.py' adding 'snakemake/executors/ga4gh_tes.py' adding 'snakemake/executors/google_lifesciences.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/jobscript.sh' adding 'snakemake/executors/slurm/__init__.py' adding 'snakemake/executors/slurm/slurm_jobstep.py' adding 'snakemake/executors/slurm/slurm_submit.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/data/__init__.py' adding 'snakemake/report/data/categories.py' adding 'snakemake/report/data/common.py' adding 'snakemake/report/data/packages.py' adding 'snakemake/report/data/results.py' adding 'snakemake/report/data/rulegraph.py' adding 'snakemake/report/data/rules.py' adding 'snakemake/report/data/runtimes.py' adding 'snakemake/report/data/timeline.py' adding 'snakemake/report/template/__init__.py' adding 'snakemake/report/template/index.html.jinja2' adding 'snakemake/report/template/logo.svg' adding 'snakemake/report/template/style.css' adding 'snakemake/report/template/components/__init__.py' adding 'snakemake/report/template/components/abstract_menu.js' adding 'snakemake/report/template/components/abstract_results.js' adding 'snakemake/report/template/components/app.js' adding 'snakemake/report/template/components/breadcrumbs.js' adding 'snakemake/report/template/components/button.js' adding 'snakemake/report/template/components/category.js' adding 'snakemake/report/template/components/common.js' adding 'snakemake/report/template/components/content.js' adding 'snakemake/report/template/components/icon.js' adding 'snakemake/report/template/components/list_heading.js' adding 'snakemake/report/template/components/list_item.js' adding 'snakemake/report/template/components/menu.js' adding 'snakemake/report/template/components/navbar.js' adding 'snakemake/report/template/components/report_info.js' adding 'snakemake/report/template/components/result_info.js' adding 'snakemake/report/template/components/result_view_button.js' adding 'snakemake/report/template/components/rule_graph.js' adding 'snakemake/report/template/components/rule_info.js' adding 'snakemake/report/template/components/search_results.js' adding 'snakemake/report/template/components/stats.js' adding 'snakemake/report/template/components/subcategory.js' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-7.32.4.dist-info/AUTHORS.rst' adding 'snakemake-7.32.4.dist-info/LICENSE.md' adding 'snakemake-7.32.4.dist-info/METADATA' adding 'snakemake-7.32.4.dist-info/WHEEL' adding 'snakemake-7.32.4.dist-info/entry_points.txt' adding 'snakemake-7.32.4.dist-info/top_level.txt' adding 'snakemake-7.32.4.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for snakemake (pyproject.toml): finished with status 'done' Created wheel for snakemake: filename=snakemake-7.32.4-py3-none-any.whl size=382315 sha256=6eed39224a43d8f80b57e71c0d6808637c120fa8e8629c5ca299d19c1901e0ea Stored in directory: /builddir/.cache/pip/wheels/53/8b/cb/3dce719624720fd97280e70d5666cec6215f6d7c6704f015ae Successfully built snakemake + read -r fn + find docs -type f -name '*.svg' ++ dirname docs/executor_tutorial/workflow/quals.svg ++ basename docs/executor_tutorial/workflow/quals.svg .svg + rsvg-convert --format=pdf --output=docs/executor_tutorial/workflow/quals.pdf docs/executor_tutorial/workflow/quals.svg + read -r fn + find docs/executor_tutorial -type f -exec gawk '/\.svg/ { print FILENAME; nextfile }' '{}' + + xargs -r -t sed -r -i 's/(image::.*)\.svg/\1\.pdf/' sed -r -i 's/(image::.*)\.svg/\1\.pdf/' docs/executor_tutorial/google_lifesciences.rst docs/executor_tutorial/azure_batch.rst + PYTHONPATH=/builddir/build/BUILD/snakemake-7.32.4 + /usr/bin/make -O -j2 V=1 VERBOSE=1 -C docs latexpdf 'SPHINXOPTS=-j${RPM_BUILD_NCPUS}' make: Entering directory '/builddir/build/BUILD/snakemake-7.32.4/docs' sphinx-build -b latex -d _build/doctrees -j2 . _build/latex Running Sphinx v7.2.6 making output directory... done myst v2.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [latex]: all documents updating environment: [new config] 38 added, 0 changed, 0 removed reading sources... [100%] snakefiles/remote_files .. tutorial/tutorial looking for now-outdated files... none found pickling environment... done checking consistency... done copying TeX support files... copying TeX support files... done processing Snakemake.tex... index getting_started/installation tutorial/tutorial tutorial/setup tutorial/basics tutorial/advanced tutorial/additional_features tutorial/short executor_tutorial/tutorial executor_tutorial/azure_batch executor_tutorial/azure_aks executor_tutorial/google_lifesciences executor_tutorial/flux snakefiles/best_practices executing/cli executing/cluster executing/cloud executing/grouping executing/caching executing/interoperability executing/monitoring snakefiles/writing_snakefiles snakefiles/rules snakefiles/configuration snakefiles/modularization snakefiles/remote_files snakefiles/utils snakefiles/deployment snakefiles/reporting snakefiles/testing snakefiles/foreign_wms project_info/citations project_info/more_resources project_info/faq project_info/contributing project_info/authors project_info/history project_info/license resolving references... done writing... done copying images... [100%] project_info/img/idea.png build succeeded, 497 warnings. The LaTeX files are in _build/latex. Run 'make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). Running LaTeX files through pdflatex... /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst:174: CRITICAL: Title level inconsistent: Use templating in profiles ~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst:111: WARNING: duplicate label profiles, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:72: WARNING: duplicate label kubernetes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:233: WARNING: duplicate label machine types, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:406: WARNING: duplicate label execution, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:490: WARNING: duplicate label execution, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst:13: WARNING: Title overline too short. -------------- Executing on SLURM clusters -------------- /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst:5: WARNING: duplicate label cluster, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/monitoring.rst:5: WARNING: duplicate label monitoring, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/monitoring.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst:184: ERROR: Unexpected indentation. /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:47: WARNING: Title underline too short. Create an Azure Storage Account and upload example data ::::::::::::::::::::::::::::::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:47: WARNING: Title underline too short. Create an Azure Storage Account and upload example data ::::::::::::::::::::::::::::::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:119: WARNING: Title underline too short. Azure Blob Storage Warning: ::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:119: WARNING: Title underline too short. Azure Blob Storage Warning: ::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:367: WARNING: Title underline too short. Defining a Start Task ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:367: WARNING: Title underline too short. Defining a Start Task ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:386: WARNING: Title underline too short. Autoscaling and Task Distribution ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:386: WARNING: Title underline too short. Autoscaling and Task Distribution ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:28: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:163: WARNING: duplicate label running the workflow, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/flux.rst:13: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/google_lifesciences.rst:13: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/flux.rst /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:688: WARNING: Title underline too short. 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/builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2652: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2661: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2684: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2704: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2735: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2768: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2789: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2808: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2837: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2937: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2946: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:18: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:25: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:32: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:53: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:63: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:70: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:75: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:82: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:92: WARNING: duplicate label bug fixes, other 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/builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:140: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:150: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:157: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:164: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:172: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:179: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:184: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:191: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:198: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:204: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:211: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:218: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:225: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:234: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:241: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:249: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:255: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:261: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:270: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:280: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:287: WARNING: duplicate label performance improvements, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:292: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:299: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:304: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:313: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:320: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:327: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:333: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:338: WARNING: duplicate label performance improvements, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:345: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:350: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:358: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:364: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:373: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:381: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:401: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:409: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:414: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:426: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:433: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:443: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:453: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:460: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:467: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:474: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:481: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:486: WARNING: duplicate label performance improvements, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:493: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:501: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:509: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:514: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:522: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:531: WARNING: duplicate label performance improvements, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:538: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:544: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:552: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:557: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:562: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:570: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:577: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:594: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:599: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:606: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:611: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:620: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:628: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md 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/builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/best_practices.rst:22: WARNING: undefined label: 'snakefiles_peps' /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst:65: WARNING: undefined label: 'snakefiles-mpi' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:316: WARNING: undefined label: 'user_manual-snakemake_options' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:412: WARNING: undefined label: 'user_manual-snakemake_options' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:433: WARNING: undefined label: 'resources_remote_execution' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:441: WARNING: undefined label: 'resources_remote_execution' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1108: WARNING: undefined label: 'snakefiles_external-scripts' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1290: WARNING: undefined label: 'snakefiles_input-functions' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1362: WARNING: undefined label: 'snakefiles_ensure' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1951: WARNING: undefined label: 'job-grouping' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1951: WARNING: undefined label: 'job-grouping' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/configuration.rst:35: WARNING: undefined label: 'api_reference_snakemake' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/utils.rst:7: WARNING: undefined label: 'utils-api' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/foreign_wms.rst:30: WARNING: undefined label: 'snakefiles-local-rule' WARNING: Could not fetch remote image: https://img.shields.io/badge/Gitpod-ready--to--code-blue?logo=gitpod [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/Gitpod-ready--to--code-blue?logo=gitpod (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/conda/dn/bioconda/snakemake.svg?label=Bioconda [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /conda/dn/bioconda/snakemake.svg?label=Bioconda (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/pypi/pyversions/snakemake.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /pypi/pyversions/snakemake.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/pypi/v/snakemake.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /pypi/v/snakemake.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/github/workflow/status/snakemake/snakemake/Publish%20to%20Docker%20Hub?color=blue&label=docker%20container&branch=main [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /github/workflow/status/snakemake/snakemake/Publish%20to%20Docker%20Hub?color=blue&label=docker%20container&branch=main (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://github.com/snakemake/snakemake/workflows/CI/badge.svg?branch=main&label=tests [HTTPSConnectionPool(host='github.com', port=443): Max retries exceeded with url: /snakemake/snakemake/workflows/CI/badge.svg?branch=main&label=tests (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/badge/stack-overflow-orange.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/stack-overflow-orange.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/twitter/follow/johanneskoester.svg?style=social&label=Follow [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /twitter/follow/johanneskoester.svg?style=social&label=Follow (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/discord/753690260830945390?label=discord%20chat [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /discord/753690260830945390?label=discord%20chat (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/github/stars/snakemake/snakemake?style=social [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /github/stars/snakemake/snakemake?style=social (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/badge/snakemake-≥5.6.0-brightgreen.svg?style=flat [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/snakemake-%E2%89%A55.6.0-brightgreen.svg?style=flat (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:266: WARNING: Lexing literal_block '# required env variables\nexport AZ_BLOB_PREFIX=snakemake-tutorial\nexport AZ_BATCH_ACCOUNT_URL="${batch_account_url}"\nexport AZ_BATCH_ACCOUNT_KEY="${az_batch_account_key}"\nexport AZ_BLOB_ACCOUNT_URL="${storage_account_url_with_sas}"\n\n# optional environment variables with defaults listed\n\n# network and identity\n# export BATCH_POOL_SUBNET_ID=\n# export BATCH_MANAGED_IDENTITY_RESOURCE_ID=\n# export BATCH_MANAGED_IDENTITY_CLIENT_ID=\n\n# if unset, default is "classic"\n# export BATCH_NODE_COMMUNICATION_SIMPLIFIED=true\n\n# don\'t recommend changing\n# export BATCH_POOL_IMAGE_PUBLISHER=microsoft-azure-batch\n# export BATCH_POOL_IMAGE_OFFER=ubuntu-server-container\n# export BATCH_POOL_IMAGE_SKU=20-04-lts\n# export BATCH_POOL_RESOURCE_FILE_PREFIX=resource-files\n\n# export BATCH_POOL_VM_CONTAINER_IMAGE=ubuntu\n# export BATCH_POOL_VM_NODE_AGENT_SKU_ID="batch.node.ubuntu 20.04"\n\n# can be used to add a startup task to the batch nodes formatted as an sas url to a bash script\n# export BATCH_NODE_START_TASK_SAS_URL=\n\n# can be useful to alter task distribution across nodes\n\n# export BATCH_POOL_VM_SIZE=Standard_D2_v3\n# export BATCH_NODE_FILL_TYPE=spread\n# export BATCH_POOL_NODE_COUNT=1\n# export BATCH_TASKS_PER_NODE=1\n\n# container registry configuration to pull container image from custom registry\n# export BATCH_CONTAINER_REGISTRY_URL=\n# export BATCH_CONTAINER_REGISTRY_USER=\n# export BATCH_CONTAINER_REGISTRY_PASS=\n\nsnakemake \\\n --jobs 3 \\\n -rpf --verbose --default-remote-prefix $AZ_BLOB_PREFIX \\\n --use-conda \\\n --default-remote-provider AzBlob \\\n --envvars AZ_BLOB_ACCOUNT_URL \\\n --az-batch \\\n --container-image snakemake/snakemake \\\n --az-batch-account-url $AZ_BATCH_ACCOUNT_URL' as "console" resulted in an error at token: "'". Retrying in relaxed mode. /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:2414: WARNING: Pygments lexer name 'jinja2' is not known make[1]: Entering directory '/builddir/build/BUILD/snakemake-7.32.4/docs/_build/latex' latexmk -pdf -dvi- -ps- 'Snakemake.tex' Rc files read: /etc/latexmkrc latexmkrc Latexmk: This is Latexmk, John Collins, 24 Dec. 2023. Version 4.82. No existing .aux file, so I'll make a simple one, and require run of *latex. Latexmk: applying rule 'pdflatex'... 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[165] [166] [167] [168] [169] [170] [171] [172] Underfull \hbox (badness 10000) in paragraph at lines 11299--11301 []\TU/FreeSerif(0)/m/n/10 When used in conjunction with \TU/FreeMono(0)/m/n/10 NCBI.RemoteProvider().search()\TU/FreeSerif(0)/m/n/10 , Snakemake and \TU/FreeM ono(0)/m/n/10 NCBI. Overfull \vbox (1.03299pt too high) detected at line 11355 [173] [174] Underfull \hbox (badness 5133) in paragraph at lines 11479--11486 []\TU/FreeSerif(0)/m/n/10 The default location for the configuration file is \T U/FreeMono(0)/m/n/10 ~/.irods/irods_environment.json\TU/FreeSerif(0)/m/n/10 . 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[240] [241] [242] [243] [244] Underfull \hbox (badness 10000) in paragraph at lines 16974--16976 []\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i n order to avoid race conditions in [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 10000) in paragraph at lines 19438--19441 []\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\ TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/ [269] [270] [271] [272] [273] [274] [275] [276] [277] [278] Underfull \hbox (badness 10000) in paragraph at lines 20504--20510 []\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/ FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1 0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use [279] [280] [281] No file Snakemake.ind. Package sphinx Warning: The package pict2e is required for rounded boxes. (sphinx) As it does not seem to be available on your system, (sphinx) options setting radii have all been ignored. Package sphinx Warning: The package ellipse is required for elliptical corners. (sphinx) As it does not seem to be available on your system, (sphinx) all non-straight corners have used circle arcs.. [282] (./Snakemake.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `Snakemake.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on Snakemake.pdf (286 pages). Transcript written on Snakemake.log. Latexmk: Getting log file 'Snakemake.log' Latexmk: Examining 'Snakemake.fls' Latexmk: Examining 'Snakemake.log' Latexmk: Index file 'Snakemake.idx' was written Latexmk: References changed. Latexmk: References changed. Latexmk: References changed. Latexmk: Log file says output to 'Snakemake.pdf' Latexmk: applying rule 'makeindex Snakemake.idx'... Rule 'makeindex Snakemake.idx': Reasons for rerun Category 'other': Rerun of 'makeindex Snakemake.idx' forced or previously required ------------ Run number 1 of rule 'makeindex Snakemake.idx' ------------ ------------ Running 'internal xindy -L english -C utf8 -M sphinx.xdy -o "Snakemake.ind" "Snakemake.idx"' ------------ Latexmk: calling xindy( -L english -C utf8 -M sphinx.xdy -o "Snakemake.ind" "Snakemake.idx" ) Latexmk: applying rule 'pdflatex'... Rule 'pdflatex': Reasons for rerun Changed files or newly in use/created: Snakemake.aux Snakemake.ind Snakemake.out Snakemake.toc ------------ Run number 2 of rule 'pdflatex' ------------ ------------ Running 'xelatex -recorder "Snakemake.tex"' ------------ This is XeTeX, Version 3.141592653-2.6-0.999995 (TeX Live 2023) (preloaded format=xelatex) restricted \write18 enabled. entering extended mode (./Snakemake.tex LaTeX2e <2022-11-01> patch level 1 L3 programming layer <2023-02-22> (./sphinxmanual.cls Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual) (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2022/07/02 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo))) (/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty Package cmap Warning: pdftex not detected - exiting. ) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec.sty (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-xetex.def))) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec-xetex.sty (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec.cfg))) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/polyglossia/polyglossia.sty (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/latex/makecmds/makecmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/l3packages/l3keys2e/l3keys2e.sty) (/usr/share/texlive/texmf-dist/tex/latex/polyglossia/gloss-latex.lde)) (/usr/share/texlive/texmf-dist/tex/latex/polyglossia/gloss-english.ldf) (/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (./sphinx.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/xetex.def) (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty)) (./sphinxoptionshyperref.sty) (./sphinxoptionsgeometry.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) (/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty) (/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg))) (./sphinxlatexgraphics.sty) (./sphinxpackageboxes.sty Package sphinx Warning: The package pict2e is required for rounded boxes. 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(sphinx) All non-straight corners will use circle arcs.. ) (./sphinxlatexadmonitions.sty (/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty)) (./sphinxlatexliterals.sty (/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) (/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)) (./sphinxlatexshadowbox.sty) (./sphinxlatexcontainers.sty) (./sphinxhighlight.sty) (./sphinxlatextables.sty (/usr/share/texlive/texmf-dist/tex/latex/tabulary/tabulary.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty) (/usr/share/texlive/texmf-dist/tex/latex/colortbl/colortbl.sty) (/usr/share/texlive/texmf-dist/tex/latex/booktabs/booktabs.sty)) (./sphinxlatexnumfig.sty) (./sphinxlatexlists.sty) (./sphinxpackagefootnote.sty ) (./sphinxlatexindbibtoc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)) (./sphinxlatexstylepage.sty (/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty (/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip-2001-04-09.sty)) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)) (./sphinxlatexstyleheadings.sty (/usr/share/texlive/texmf-dist/tex/latex/titlesec/titlesec.sty)) (./sphinxlatexstyletext.sty) (./sphinxlatexobjects.sty)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hxetex.def (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) (./sphinxmessages.sty) Writing index file Snakemake.idx (./Snakemake.aux) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd) *geometry* driver: auto-detecting *geometry* detected driver: xetex (./Snakemake.out) (./Snakemake.out) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1] [2] (./Snakemake.toc) [1] [2] [1] [2] Chapter 1. [3] [4] Chapter 2. [5] [6] Chapter 3. [7] [8] Chapter 4. [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] Overfull \vbox (1.78299pt too high) detected at line 2638 [43] [44] [45] [46] Overfull \hbox (16.155pt too wide) in paragraph at lines 2923--2925 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_IMAGE_PUBLISHER| Overfull \hbox (40.465pt too wide) in paragraph at lines 2953--2955 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_VM_CONTAINER_IMAGE| Overfull \hbox (52.17499pt too wide) in paragraph at lines 2963--2965 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_VM_NODE_AGENT_SKU_ID| Overfull \hbox (42.36499pt too wide) in paragraph at lines 3003--3005 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_RESOURCE_FILE_PREFIX| Overfull \hbox (34.435pt too wide) in paragraph at lines 3013--3015 []|\TU/FreeSerif(0)/m/n/10 BATCH_NODE_START_TASK_SAS_URL| Overfull \hbox (72.44499pt too wide) in paragraph at lines 3033--3035 []|\TU/FreeSerif(0)/m/n/10 BATCH_NODE_COMMUNICATION_SIMPLIFIED| Overfull \hbox (67.97499pt too wide) in paragraph at lines 3053--3055 []|\TU/FreeSerif(0)/m/n/10 BATCH_MANAGED_IDENTITY_RESOURCE_ID| Overfull \hbox (51.485pt too wide) in paragraph at lines 3063--3065 []|\TU/FreeSerif(0)/m/n/10 BATCH_MANAGED_IDENTITY_CLIENT_ID| Overfull \hbox (28.965pt too wide) in paragraph at lines 3073--3075 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_URL| Overfull \hbox (34.045pt too wide) in paragraph at lines 3083--3085 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_USER| Overfull \hbox (31.625pt too wide) in paragraph at lines 3093--3095 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_PASS| [47] Overfull \vbox (0.72789pt too high) detected at line 3160 [48] Overfull \vbox (1.98596pt too high) detected at line 3201 [49] Underfull \vbox (badness 10000) detected at line 3201 Overfull \vbox (1.98598pt too high) detected at line 3201 [50] Underfull \hbox (badness 10000) in paragraph at lines 3235--3239 \TU/FreeSerif(0)/m/n/10 The azure batch executor supports autoscaling of the ba tch nodes by including the flag [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3376--3388 []\TU/FreeSerif(0)/m/n/10 There is a lot going on here, so let’s unpack it: thi s creates an [][]auto-scaling Kubernetes cluster[][] [53] [54] [55] [56] [57] Overfull \vbox (1.98596pt too high) detected at line 3840 [58] [59] [60] Underfull \vbox (badness 10000) detected at line 4080 Overfull \vbox (1.98598pt too high) detected at line 4080 [61] Underfull \vbox (badness 10000) detected at line 4080 Overfull \vbox (1.98598pt too high) detected at line 4080 [62] [63] [64] [65] [66] Underfull \vbox (badness 10000) detected at line 4358 Underfull \vbox (badness 10000) detected at line 4358 [67] Underfull \vbox (badness 10000) detected at line 4358 Overfull \vbox (1.98598pt too high) detected at line 4358 [68] Underfull \vbox (badness 1565) detected at line 4404 [69] [70] Overfull \vbox (2.98596pt too high) detected at line 4504 [71] [72] [73] Underfull \vbox (badness 2126) detected at line 4740 [74] [75] [76] [77] [78] Overfull \vbox (2.033pt too high) detected at line 5158 [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Overfull \hbox (11.06543pt too wide) in paragraph at lines 5685--5687 []\TU/FreeSerif(0)/m/n/10 Target particular jobs by RULE:WILDCARD1=VALUE,WILDCA RD2=VALUE,… [89] [90] [91] [92] [93] Underfull \hbox (badness 10000) in paragraph at lines 5946--5948 []\TU/FreeSerif(0)/m/n/10 Additional tibanna config e.g. –tibanna-config spot_i nstance=true sub- [94] [95] [96] Underfull \hbox (badness 10000) in paragraph at lines 6273--6273 []\TU/FreeSans(0)/m/n/10 Snakemake re- Overfull \hbox (0.88507pt too wide) in paragraph at lines 6273--6273 []\TU/FreeMono(0)/m/n/10 slurm_partition| Overfull \hbox (3.79732pt too wide) in paragraph at lines 6273--6273 [][]\TU/FreeMono(0)/m/n/10 c\TU/FreeSerif(0)/m/n/10 /[][]\TU/FreeMono(0)/m/n/10 cpus[]per[]task| [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 7013--7017 []\TU/FreeSerif(0)/m/n/10 The azure batch executor supports autoscaling of the batch nodes by including the flag [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 7213--7216 []|\TU/FreeSerif(0)/m/n/10 Snakemake gets the status of panoptes. Underfull \hbox (badness 6859) in paragraph at lines 7213--7216 \TU/FreeSerif(0)/m/n/10 Snakemake continues to run if the status Underfull \hbox (badness 10000) in paragraph at lines 7230--7232 []|\TU/FreeMono(0)/m/n/10 / Overfull \hbox (9.78429pt too wide) in paragraph at lines 7230--7232 \TU/FreeMono(0)/m/n/10 update_workflow_status| [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] Underfull \hbox (badness 5652) in paragraph at lines 8976--8980 \TU/FreeSerif(0)/m/n/10 Snakemake tracks the code that was used to create your files. In combination with [][]\TU/FreeMono(0)/m/n/10 summary \TU/FreeSerif(0)/ m/n/10 or [137] [138] [139] [140] [141] [142] [143] [144] Overfull \vbox (2.64099pt too high) detected at line 9545 [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] Overfull \vbox (0.688pt too high) detected at line 10609 [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] Underfull \hbox (badness 10000) in paragraph at lines 11299--11301 []\TU/FreeSerif(0)/m/n/10 When used in conjunction with \TU/FreeMono(0)/m/n/10 NCBI.RemoteProvider().search()\TU/FreeSerif(0)/m/n/10 , Snakemake and \TU/FreeM ono(0)/m/n/10 NCBI. Overfull \vbox (1.03299pt too high) detected at line 11355 [173] [174] Underfull \hbox (badness 5133) in paragraph at lines 11479--11486 []\TU/FreeSerif(0)/m/n/10 The default location for the configuration file is \T U/FreeMono(0)/m/n/10 ~/.irods/irods_environment.json\TU/FreeSerif(0)/m/n/10 . T he \TU/FreeMono(0)/m/n/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 11479--11486 \TU/FreeMono(0)/m/n/10 moteProvider() \TU/FreeSerif(0)/m/n/10 class accepts the parameter \TU/FreeMono(0)/m/n/10 irods_env_file \TU/FreeSerif(0)/m/n/10 where an alternative path to the [175] [176] [177] Underfull \hbox (badness 10000) in paragraph at lines 11628--11634 \TU/FreeSerif(0)/m/n/10 If you need to access a deposition with restricted acce ss, you have to additionally provide a \TU/FreeMono(0)/m/n/10 re- [178] [179] Underfull \hbox (badness 5878) in paragraph at lines 11786--11792 []\TU/FreeSerif(0)/m/n/10 First, we load a local configuration file. Next, we d efine the module \TU/FreeMono(0)/m/n/10 dna_seq \TU/FreeSerif(0)/m/n/10 to be l oaded from [180] Overfull \vbox (2.98596pt too high) detected at line 11881 [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Overfull \vbox (2.0pt too high) has occurred while \output is active [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] Underfull \vbox (badness 10000) detected at line 13935 Overfull \vbox (1.98598pt too high) detected at line 13935 [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 14076--14079 []\TU/FreeSerif(0)/m/n/10 Provide hyperlink targets, at least for the first two section levels. For this, use the format [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script= latn;language=dflt;! [240] [241] [242] [243] [244] Underfull \hbox (badness 10000) in paragraph at lines 16974--16976 []\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i n order to avoid race conditions in [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 10000) in paragraph at lines 19438--19441 []\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\ TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/ [269] [270] [271] [272] [273] [274] [275] [276] [277] [278] Underfull \hbox (badness 10000) in paragraph at lines 20504--20510 []\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/ FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1 0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use [279] [280] [281] (./Snakemake.ind) Package sphinx Warning: The package pict2e is required for rounded boxes. (sphinx) As it does not seem to be available on your system, (sphinx) options setting radii have all been ignored. Package sphinx Warning: The package ellipse is required for elliptical corners. (sphinx) As it does not seem to be available on your system, (sphinx) all non-straight corners have used circle arcs.. [282] (./Snakemake.aux) ) (see the transcript file for additional information) Output written on Snakemake.pdf (286 pages). Transcript written on Snakemake.log. Latexmk: Getting log file 'Snakemake.log' Latexmk: Examining 'Snakemake.fls' Latexmk: Examining 'Snakemake.log' Latexmk: Index file 'Snakemake.idx' was written Latexmk: Log file says output to 'Snakemake.pdf' Latexmk: Summary of warnings from last run of *latex: =====Latex reported missing or unavailable character(s). =====See log file for details. Latexmk: All targets () are up-to-date make[1]: Leaving directory '/builddir/build/BUILD/snakemake-7.32.4/docs/_build/latex' make: Entering directory '/builddir/build/BUILD/snakemake-7.32.4/docs' pdflatex finished; the PDF files are in _build/latex. make: Leaving directory '/builddir/build/BUILD/snakemake-7.32.4/docs' Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.VxL4Xf Latexmk: Missing input file 'Snakemake.toc' (or dependence on it) from following: No file Snakemake.toc. Latexmk: Missing input file 'Snakemake.ind' (or dependence on it) from following: No file Snakemake.ind. Latexmk: ====Undefined refs and citations with line #s in .tex file: Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script= Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script=latn;language=dflt;! + RPM_EC=0 ++ jobs -p + exit 0 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 ++ dirname /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 ++ ls /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir/snakemake-7.32.4-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=snakemake==7.32.4 + '[' -z snakemake==7.32.4 ']' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir snakemake==7.32.4 Using pip 23.3.1 from /usr/lib/python3.12/site-packages/pip (python 3.12) Looking in links: /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir Processing ./pyproject-wheeldir/snakemake-7.32.4-py3-none-any.whl Installing collected packages: snakemake Creating /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin changing mode of /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin/snakemake to 755 changing mode of /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin/snakemake-bash-completion to 755 Successfully installed snakemake-7.32.4 + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin/snakemake /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin/snakemake-bash-completion /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin/snakemake: updating /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin/snakemake-bash-completion: updating + rm -rfv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages ']' + site_dirs+=("/usr/lib/python3.12/site-packages") + '[' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib64/python3.12/site-packages '!=' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages ']' + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib64/python3.12/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 --record /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD --output /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD removed '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_PERCENTAGES_COUNT=2 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-files --output-modules /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 --sitelib /usr/lib/python3.12/site-packages --sitearch /usr/lib64/python3.12/site-packages --python-version 3.12 --pyproject-record /builddir/build/BUILD/snakemake-7.32.4-3.fc39.x86_64-pyproject-record --prefix /usr -l snakemake + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/man/man1 + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages + help2man --no-info '--name=Metapackage for snakemake: azure extras' snakemake + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/bash-completion/completions + touch Snakefile + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages + snakemake --bash-completion + install -t /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles + cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles 'misc/vim/README.md' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/README.md' 'misc/vim/ftdetect' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/ftdetect' 'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/ftdetect/snakemake.vim' 'misc/vim/ftplugin' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/ftplugin' 'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/ftplugin/snakemake' 'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim' 'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim' 'misc/vim/syntax' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/syntax' 'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/syntax/snakemake.vim' + find /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/vim/vimfiles/README.md + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 7.32.4-3.fc39 --unique-debug-suffix -7.32.4-3.fc39.x86_64 --unique-debug-src-base snakemake-7.32.4-3.fc39.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/snakemake-7.32.4 find-debuginfo: starting Extracting debug info from 0 files Creating .debug symlinks for symlinks to ELF files find: ‘debug’: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.SVjX1O + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 + k='not test_lint[long_run-positive]' + k='not test_lint[long_run-positive] and not test_tibanna' + k='not test_lint[long_run-positive] and not test_tibanna and not test_tes' + k='not test_lint[long_run-positive] and not test_tibanna and not test_tes and not test_slurm_' + ignore=' --ignore=tests/test_google_lifesciences.py' + ignore=' --ignore=tests/test_google_lifesciences.py --ignore-glob=tests/test_conda_python_3_7_script/*' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=2 + /usr/bin/pytest -v -k 'not test_lint[long_run-positive] and not test_tibanna and not test_tes and not test_slurm_' --ignore=tests/test_google_lifesciences.py '--ignore-glob=tests/test_conda_python_3_7_script/*' ============================= test session starts ============================== platform linux -- Python 3.12.1, pytest-7.4.3, pluggy-1.3.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/snakemake-7.32.4 plugins: requests-mock-1.10.0 collecting ... collected 66 items / 8 deselected / 58 selected tests/test_azure_batch_executor.py::test_az_batch_executor SKIPPED (...) [ 1%] tests/test_expand.py::test_simple_expand PASSED [ 3%] tests/test_expand.py::test_allow_missing PASSED [ 5%] tests/test_io.py::test_wildcard_regex PASSED [ 6%] tests/test_io.py::test_expand PASSED [ 8%] tests/test_kubernetes.py::test_kubernetes_plain SKIPPED (Skipping GC...) [ 10%] tests/test_kubernetes.py::test_kubernetes_conda SKIPPED (Skipping GC...) [ 12%] tests/test_kubernetes.py::test_kubernetes_singularity SKIPPED (Skipp...) [ 13%] tests/test_kubernetes.py::test_kubernetes_conda_singularity SKIPPED [ 15%] tests/test_kubernetes.py::test_issue1041 SKIPPED (Skipping GCLOUD te...) [ 17%] tests/test_linting.py::test_lint[version-positive] PASSED [ 18%] tests/test_linting.py::test_lint[version-negative] PASSED [ 20%] tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 22%] tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 24%] tests/test_linting.py::test_lint[singularity-positive] PASSED [ 25%] tests/test_linting.py::test_lint[singularity-negative] PASSED [ 27%] tests/test_linting.py::test_lint[path_add-positive] PASSED [ 29%] tests/test_linting.py::test_lint[path_add-negative] PASSED [ 31%] tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 32%] tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 34%] tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 36%] tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 37%] tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 39%] tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 41%] tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 43%] tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 44%] tests/test_linting.py::test_lint[long_run-negative] PASSED [ 46%] tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 48%] tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 50%] tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 51%] tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 53%] tests/test_linting.py::test_lint[envvars-positive] PASSED [ 55%] tests/test_linting.py::test_lint[envvars-negative] PASSED [ 56%] tests/test_linting.py::test_lint[dynamic-positive] PASSED [ 58%] tests/test_linting.py::test_lint[dynamic-negative] PASSED [ 60%] tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 62%] tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 63%] tests/test_persistence.py::TestCleanupContainers::test_one_unrequired_container_gets_removed PASSED [ 65%] tests/test_schema.py::test_config PASSED [ 67%] tests/test_schema.py::test_config_ref PASSED [ 68%] tests/test_schema.py::test_dataframe PASSED [ 70%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_shebang_and_second_manifest PASSED [ 72%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_with_shebang PASSED [ 74%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_without_shebang PASSED [ 75%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_empty_line_without_shebang PASSED [ 77%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_is_case_insensitive PASSED [ 79%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spacing_has_no_impact PASSED [ 81%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_formatting_not_touched_even_if_wrong PASSED [ 82%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spelt_wrong PASSED [ 84%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_shebang PASSED [ 86%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_without_shebang PASSED [ 87%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_spacing_around_language PASSED [ 89%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_has_non_cargo_block PASSED [ 91%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_missing_closing_fence PASSED [ 93%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_not_in_first_comment_block PASSED [ 94%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_outer_line_doc_comment PASSED [ 96%] tests/test_script.py::TestBashEncoder::test_named_list_one_named_one_str PASSED [ 98%] tests/test_script.py::TestBashEncoder::test_named_list_named_is_list PASSED [100%] =============================== warnings summary =============================== tests/test_schema.py: 12 warnings /builddir/build/BUILD/snakemake-7.32.4/snakemake/utils.py:50: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need. from jsonschema import validators, RefResolver tests/test_schema.py::test_config :488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/test_schema.py::test_config :488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/test_schema.py::test_config /usr/lib64/python3.12/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). _EPOCH_DATETIME = datetime.utcfromtimestamp(0) tests/test_schema.py::test_dataframe /usr/lib64/python3.12/site-packages/pandas/core/algorithms.py:522: DeprecationWarning: np.find_common_type is deprecated. Please use `np.result_type` or `np.promote_types`. See https://numpy.org/devdocs/release/1.25.0-notes.html and the docs for more information. (Deprecated NumPy 1.25) common = np.find_common_type([values.dtype, comps_array.dtype], []) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========== 52 passed, 6 skipped, 8 deselected, 16 warnings in 16.80s =========== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: snakemake-7.32.4-3.fc39.noarch Provides: python3.12dist(snakemake) = 7.32.4 python3dist(snakemake) = 7.32.4 snakemake = 7.32.4-3.fc39 vim-snakemake = 7.32.4-3.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.12dist(jinja2) < 4~~ with python3.12dist(jinja2) >= 3) (python3.12dist(yte) < 2~~ with python3.12dist(yte) >= 1.5.1) /usr/bin/python3 python(abi) = 3.12 python3.12dist(appdirs) python3.12dist(configargparse) python3.12dist(connection-pool) >= 0.0.3 python3.12dist(datrie) python3.12dist(docutils) python3.12dist(gitpython) python3.12dist(humanfriendly) python3.12dist(jsonschema) python3.12dist(nbformat) python3.12dist(packaging) python3.12dist(psutil) python3.12dist(pulp) >= 2 python3.12dist(pyyaml) python3.12dist(requests) python3.12dist(reretry) python3.12dist(smart-open) >= 3 python3.12dist(stopit) python3.12dist(tabulate) python3.12dist(throttler) python3.12dist(toposort) >= 1.10 python3.12dist(wrapt) Processing files: snakemake-doc-7.32.4-3.fc39.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.sLMSvp + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + DOCDIR=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/doc/snakemake-doc + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README-nano.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README-vim.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/docs/_build/latex/Snakemake.pdf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/doc/snakemake-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.syWdvd + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + LICENSEDIR=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/licenses/snakemake-doc + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/licenses/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/LICENSE.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64/usr/share/licenses/snakemake-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: snakemake-doc = 7.32.4-3.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: snakemake+reports-7.32.4-3.fc39.noarch Provides: python3.12dist(snakemake[reports]) = 7.32.4 python3dist(snakemake[reports]) = 7.32.4 snakemake+reports = 7.32.4-3.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(pygments) Processing files: snakemake+messaging-7.32.4-3.fc39.noarch Provides: python3.12dist(snakemake[messaging]) = 7.32.4 python3dist(snakemake[messaging]) = 7.32.4 snakemake+messaging = 7.32.4-3.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(slacker) Processing files: snakemake+google-cloud-7.32.4-3.fc39.noarch Provides: python3.12dist(snakemake[google-cloud]) = 7.32.4 python3dist(snakemake[google-cloud]) = 7.32.4 snakemake+google-cloud = 7.32.4-3.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(google-api-python-client) python3.12dist(google-cloud-storage) python3.12dist(google-crc32c) python3.12dist(oauth2client) Processing files: snakemake+azure-7.32.4-3.fc39.noarch Provides: python3.12dist(snakemake[azure]) = 7.32.4 python3dist(snakemake[azure]) = 7.32.4 snakemake+azure = 7.32.4-3.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(azure-batch) python3.12dist(azure-core) python3.12dist(azure-identity) python3.12dist(azure-mgmt-batch) python3.12dist(azure-storage-blob) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc39.src.rpm Wrote: /builddir/build/RPMS/snakemake-doc-7.32.4-3.fc39.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+reports-7.32.4-3.fc39.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+messaging-7.32.4-3.fc39.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+google-cloud-7.32.4-3.fc39.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+azure-7.32.4-3.fc39.noarch.rpm Wrote: /builddir/build/RPMS/snakemake-7.32.4-3.fc39.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.HRkkI7 + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + /usr/bin/rm -rf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc39.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Jx5MUb + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + rm -rf snakemake-7.32.4 snakemake-7.32.4.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild snakemake-7.32.4-3.fc39.src.rpm Finish: build phase for snakemake-7.32.4-3.fc39.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1704460428.139735/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1704460428.139735/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1704460428.139735/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-7.32.4-3.fc39.src.rpm) Config(child) 2 minutes 32 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "snakemake-doc", "epoch": null, "version": "7.32.4", "release": "3.fc39", "arch": "noarch" }, { "name": "snakemake+messaging", "epoch": null, "version": "7.32.4", "release": "3.fc39", "arch": "noarch" }, { "name": "snakemake+azure", "epoch": null, "version": "7.32.4", "release": "3.fc39", "arch": "noarch" }, { "name": "snakemake+google-cloud", "epoch": null, "version": "7.32.4", "release": "3.fc39", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "7.32.4", "release": "3.fc39", "arch": "noarch" }, { "name": "snakemake+reports", "epoch": null, "version": "7.32.4", "release": "3.fc39", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "7.32.4", "release": "3.fc39", "arch": "src" } ] } RPMResults finished